Psyllid ID: psy9949

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
Protein Sequence
MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
Secondary Structure (PSIPRED)
ccEEEEEEEcccccccccccccccccccEEEEccccccccEEEEccccccccccccEEEEEEEEcccHHHHHHHcccccHHHHHHHHccccccccccccccEEcccEEEEEEEEcccccccccccEEEEEccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEccccHHHHHHHccccEEEEcccccHHHHccccccEEEEEEccccccccccHHHHcccccccEEEEEccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEEEEEccHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHcccccccEEEEc
Secondary Structure Prediction (SSPRO)
cEEEEEEEcccccEEEEcccccccccEEEEEEEccccccEEEEcccccccccccccEEEEEEEEEEccHHHHHHccccccccccccccccccccccccccEEccccccEEEEEccccccEcccccEEEEcccccccccEEEEEEEcHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHHcccccEEEEEcccccHHHHHHHHHHHccccEEEEEEEcccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccccccEEEEEc
Coil and Loop (DISEMBL)
mfvcckifskvpvqlnkinhlkysTRTAAWQIssyggadelqfndnvktpilksKDVLVEMKAvsvnpidvamLGGYGNVVLNSlrqletcsvepvlefpltlgrdfcgkivakgprvtdlniddVVYGviqphkqgsfSKLILADSalvhkkpsnisdeeAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGdakdlvtslnpnlvidynepeamhsiagagpydvildaagipldqinsylpflktgkfskfvtlrspflkntdslglvpGLVKNAFDLLKSnfesgelcktntirwgffmpipyAVKEINKFIergqikpvidskynfcelpTAFEKVQQGhlrgkiilna
Flexible Loop (DISEMBL)
MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYggadelqfndNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAkgprvtdlnIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFlkntdslglvPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFekvqqghlrgkiilna
Low Complexity Region (SEG)
MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
Disordered region (IsUnstruct)
*FVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHK****I*DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKII***
Disordered Region (DISOPRED)
**************************TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
Disordered Region (DISEMBL)
MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
Disordered Region (DISPRO)
MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFVCCKIFSKVPVQLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	383	2.2.26 [Sep-21-2011]
Q7T3C7	387	Reticulon-4-interacting p	yes	N/A	0.911	0.901	0.383	4e-63
Q8WWV3	396	Reticulon-4-interacting p	yes	N/A	0.921	0.891	0.379	4e-62
Q0VC50	396	Reticulon-4-interacting p	yes	N/A	0.924	0.893	0.372	9e-62
Q924D0	396	Reticulon-4-interacting p	yes	N/A	0.924	0.893	0.375	1e-59
Q54II4	352	Reticulon-4-interacting p	yes	N/A	0.877	0.954	0.261	6e-25
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	N/A	0.825	0.960	0.270	2e-22
O42909	347	Zinc-type alcohol dehydro	yes	N/A	0.765	0.844	0.270	1e-21
Q9SV68	329	Putative quinone-oxidored	no	N/A	0.812	0.945	0.284	6e-21
Q9ZUC1	386	Quinone oxidoreductase-li	no	N/A	0.757	0.751	0.275	1e-20
Q6GEP3	335	Zinc-type alcohol dehydro	yes	N/A	0.464	0.531	0.314	3e-18

>sp|Q7T3C7|RT4I1_DANRE Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2

 Score =  242 bits (617), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/355 (38%), Positives = 203/355 (57%), Gaps = 6/355 (1%)

Query: 29  AWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
           AW I  YG  D L+F  N   PI+    +V+V++ A  +NPID++M GGYG   +   R 
Sbjct: 31  AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRD 90

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
               S +   EFPL LGRD  G+I+  G  V      D V+  I P KQGS ++ ++   
Sbjct: 91  PLNIS-QSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWKQGSLAEFVVVSG 149

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             V  KP ++  +EAA + Y   TAWSA+  T  L       KRVL+LG SGGVGT A+Q
Sbjct: 150 NEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQ 209

Query: 208 LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267
           ++KAW   V  TCS +A+ LV  L  + V+DY        +     +D+ILD+ G   ++
Sbjct: 210 MVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGGETEK 269

Query: 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR 327
               L  LK    +KFVTL +PFL+NTD LGL  G++++A  +     ++  L K    R
Sbjct: 270 WA--LDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTVGCKVVKN--LRKGVHYR 325

Query: 328 WGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
           WGFF P   A+ E+++ ++ G+++PV++  ++F ++P AF+KV+QGH RGK +++
Sbjct: 326 WGFFAPSGSALDEVSEMVDAGKVRPVVEEVFSFAQVPEAFQKVEQGHARGKTVVS 380

May be a potent inhibitor of regeneration.
Danio rerio (taxid: 7955)

>sp|Q8WWV3|RT4I1_HUMAN Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2

 Score =  238 bits (608), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/361 (37%), Positives = 195/361 (54%), Gaps = 8/361 (2%)

Query: 24  STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
           ST   AW I  YG  + L+F  N+  PI+    +V+V++ A SVNPIDV M  GYG   L
Sbjct: 40  STVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATAL 99

Query: 83  NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
           N  R      ++   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct: 100 NMKRDPLHVKIKGE-EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEF 158

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
           ++     V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVG
Sbjct: 159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 218

Query: 203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
           T A+Q++KAWD  V   CS DA +LV  L  + VIDY        +    P+D ILD  G
Sbjct: 219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG 278

Query: 263 IPLDQINSYLP-FLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321
                  ++ P FLK    + +VTL +PFL N D LG+  G+++    +     +     
Sbjct: 279 ---GSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALK--HFW 333

Query: 322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           K    RW FFM     + +I + ++ G+I+PVI+  + F ++P AF KV++GH RGK ++
Sbjct: 334 KGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 393

Query: 382 N 382
           N
Sbjct: 394 N 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Homo sapiens (taxid: 9606)

>sp|Q0VC50|RT4I1_BOVIN Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1

 Score =  237 bits (605), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 134/360 (37%), Positives = 195/360 (54%), Gaps = 6/360 (1%)

Query: 24  STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
           ST   AW I  YG  + L+F  N+  P++    +V++++ A S+NPIDV M  GYG   L
Sbjct: 40  STVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATAL 99

Query: 83  NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
           N  R      ++   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct: 100 NMKRDPLHVKIKGE-EFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEF 158

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
           ++     V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVG
Sbjct: 159 VVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVG 218

Query: 203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
           T A+Q++KAWD  V   CS DA +LV  L  + VIDY        +  + P+D ILD  G
Sbjct: 219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVG 278

Query: 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
              +     L FLK    + +VTL +PFL N D LG+  G+++    +     +     +
Sbjct: 279 GSTE--TWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLK--HFWQ 334

Query: 323 TNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
               RW FFM     + +I + +E G+I+PVI+  + F ++P AF KV++GH RGK ++N
Sbjct: 335 GVHYRWAFFMASGPCLDDIAELVEAGKIQPVIEKTFPFSKVPEAFLKVERGHARGKTVIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Bos taurus (taxid: 9913)

>sp|Q924D0|RT4I1_MOUSE Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/360 (37%), Positives = 192/360 (53%), Gaps = 6/360 (1%)

Query: 24  STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
           ST   AW I  YG  + L+F  N+  PI+    +V++++ A SVNPIDV M  GYG   L
Sbjct: 40  STVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query: 83  NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
           N  R       +   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct: 100 NMKRDPLHMKTKGE-EFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWKQGTLSEF 158

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
           ++     V  KP +++  +AA + Y  LTAWSA+     L     + KR L+LGASGGVG
Sbjct: 159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVG 218

Query: 203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
           T A+Q++KAW   V   CS DA +LV  L  + VIDY        +     +D ILD  G
Sbjct: 219 TFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVG 278

Query: 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
              +     L FLK    + +VTL +PFL N D LG+  G+++    +     +   L +
Sbjct: 279 GSTE--TWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALK--HLWQ 334

Query: 323 TNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
               RW FFM     + EI + ++ G+I+PVI+  + F E+P AF KV++GH RGK ++N
Sbjct: 335 GVHYRWAFFMASGPYLDEIAELVDAGKIRPVIERTFPFSEVPEAFLKVERGHARGKTVVN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Mus musculus (taxid: 10090)

>sp|Q54II4|RT4I1_DICDI Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1

 Score =  115 bits (288), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 164/359 (45%), Gaps = 23/359 (6%)

Query: 32  ISSYGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLET 90
           ++ YG + D L++  ++  P      VL+++ + S+NP+D  M  GY + +         
Sbjct: 6   LNGYGESLDLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSI--------- 56

Query: 91  CSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALV 150
             V+  L+ P+ LGR+  G+IV  G  V D  I D V+    P   GS  + I  D + +
Sbjct: 57  --VDLKLKLPIILGRECSGEIVEIGDSVWDYEIGDQVWSASPPFSMGSHCEYITVDESEI 114

Query: 151 HKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLK 210
             KP N++ +++A + +  LTAW+A+            + ++LV G +G VG   +QLLK
Sbjct: 115 SLKPKNLTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLK 174

Query: 211 AW--DIEVVTTCSGDAKDLVTSLN-PNLVIDYNEPEAMHSIAGAGPYDVIL---DAAGIP 264
                 +V TTC+    + +  L   N  IDYN  +   +      +D+I    D     
Sbjct: 175 KHLNVNQVSTTCNIKHFEKLKKLTLVNETIDYNNLKINDN--DNNKFDLIFNCYDGGKNQ 232

Query: 265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE-SGELCKT 323
            +     +  LK G     +    P +K +D  G++ GL     + L S+     +  K 
Sbjct: 233 NENEKKCIDALKDG--GNLIGFNGPLVKFSDKDGVLSGLPMGMMNQLNSSERIKKQYSKN 290

Query: 324 NTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
             + +  F P    +K+I+K  E   + P ID ++N  ++  A+   +  +  GKII+N
Sbjct: 291 VHLDYAIFSPSGSTLKQISKLYENNILIPNIDKQFNLNQIKDAYTCFENSNSNGKIIIN 349

Dictyostelium discoideum (taxid: 44689)

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 152/359 (42%), Gaps = 43/359 (11%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A Q S YGG  +   +  V  P  KS ++L++++A ++NPID                ++
Sbjct: 8   AIQYSGYGGGTDALKHVEVAVPDPKSDELLLKIEAATLNPID---------------WKI 52

Query: 89  ETCSVEPVL--EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILAD 146
           +   + P+L  +FP   G D  G++V  G  V      D V  V+     G+ ++  +A 
Sbjct: 53  QKGVLRPLLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLSHATGGALAEYAVAK 112

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKR-VLVLGASGGVGTMA 205
             L   +P  +S  E A +    LTA  AL   A + L    +++ +L+  ASGGVG  A
Sbjct: 113 ENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYA 172

Query: 206 VQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAG-PYD-VILDAAGI 263
           VQL K  +  V  TC     D V  L  + V+DY  PE     + +G  YD V+  A+GI
Sbjct: 173 VQLAKLGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGI 232

Query: 264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT 323
           P                       S F  N    G V  L      ++   ++     K 
Sbjct: 233 PW----------------------STFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTFSKK 270

Query: 324 NTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
             +       IP     +N  ++  ++K VIDSK+   +   A+ ++  GH  GKII+ 
Sbjct: 271 QLVPLLLIPKIPNFEYVVN-LVKEKKLKTVIDSKHPLSKGEDAWSRIMGGHATGKIIIE 328

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O42909|YBI2_SCHPO Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.02c PE=3 SV=1

 Score =  104 bits (259), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 143/333 (42%), Gaps = 40/333 (12%)

Query: 56  DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKG 115
           DVLVE+ A S+NP+D  ++  Y  +             + + + P   G DF G+++A G
Sbjct: 45  DVLVEVVATSINPLDYKLMNTYQMIA------------KALFKLPNIPGYDFAGRVLAVG 92

Query: 116 PRVTDLNIDDVVYGVIQ----PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLT 171
             V + +    V+G         + GS +  I+     V   P  +S  E AG    GLT
Sbjct: 93  SEVKEFSATQRVWGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVSFNEGAGFGIAGLT 152

Query: 172 AWSAL--QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVT 229
           AW  L  Q+    G       ++++ GASGGVGT AV L KA + EV T  S +  DL  
Sbjct: 153 AWEVLVRQMKVKPG------TKLVIEGASGGVGTFAVALAKALECEVTTISSTENLDLCK 206

Query: 230 SLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP 289
           SL     +DY +   +  +A  GPYD + D        +N  + +  +   SKFV     
Sbjct: 207 SLGATHTLDYKKDNLVERLADLGPYDFVFDC-------VNDNVLYRAS---SKFVKPDGA 256

Query: 290 FLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAV-KEINKFIERG 348
           F      + L           L        L  ++   +   + +   + ++   F+ + 
Sbjct: 257 FFGIGGDITL-----SYVGSRLSRTLRPRVLGGSSHSYYNILLHVDQEMLRDFVDFVMKH 311

Query: 349 QIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
            IK VIDS Y+F +   AF ++     +GK+I+
Sbjct: 312 NIKTVIDSVYDFEDTVEAFNRLMTHRCKGKVII 344

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1

 Score =  102 bits (254), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 154/362 (42%), Gaps = 51/362 (14%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A Q +SYGG      +  V  P  KS +V ++++A S+NP+D                ++
Sbjct: 8   ALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVD---------------WKI 52

Query: 89  ETCSVEPVL--EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILAD 146
           +   + P L  +FP     D  G++V  G  V +    D V  V+     G  ++  +A 
Sbjct: 53  QKGMIRPFLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVAT 112

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDK-RVLVLGASGGVGTMA 205
             L  K+P  +   EAA +   GLTA  AL   A L L     K  +LV  ASGGVG  A
Sbjct: 113 EKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYA 172

Query: 206 VQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE--AMHSIAGAGPYDVILDAA-G 262
           VQL K  +  V  TC     + V SL  + V+DY  PE  A+ S +G   YD ++  A G
Sbjct: 173 VQLAKLANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGK-KYDAVVHCANG 231

Query: 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNA---FDLLKSNFESGE 319
           IP                  F        +N   + + PG   NA   + + K      +
Sbjct: 232 IP------------------FSVFEPNLSENGKVIDITPG--PNAMWTYAVKKITMSKKQ 271

Query: 320 LCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKI 379
           L           +P    ++ +   ++ G++K VIDSK+   +   A+ K   GH  GKI
Sbjct: 272 LVPL------LLIPKAENLEFMVNLVKEGKVKTVIDSKHPLSKAEDAWAKSIDGHATGKI 325

Query: 380 IL 381
           I+
Sbjct: 326 IV 327

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  101 bits (251), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 154/366 (42%), Gaps = 76/366 (20%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           AW  S YGG D L+   N+  P +K   VL+++ A ++NP+D     G      + L   
Sbjct: 80  AWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL--- 136

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ------PHKQGSFSKL 142
                      P   G D  G +V  G  V DL   D VY  +       P + GS ++ 
Sbjct: 137 -----------PTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEY 185

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
              +  L+  KP NI   +AAG+     TA   L  T      +   K +LVL  +GGVG
Sbjct: 186 TAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTE-----FSAGKSILVLNGAGGVG 240

Query: 203 TMAVQLLKA--WDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDA 260
           ++ +QL K      +V  T S +  +LV SL  +L IDY + E +  +     YDV+ DA
Sbjct: 241 SLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTK-ENIEDLPDK--YDVVFDA 297

Query: 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG---LVKNAFDLLKSNFES 317
            G+     +  +  +K G   K V L              PG   +V +  D+L      
Sbjct: 298 IGM----CDKAVKVIKEG--GKVVALTGAVTP--------PGFRFVVTSNGDVL------ 337

Query: 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSK--YNFCELPTAFEKVQQGHL 375
                                K++N +IE G++KPV+D K  + F  +  AF  ++  H 
Sbjct: 338 ---------------------KKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHA 376

Query: 376 RGKIIL 381
            GK+++
Sbjct: 377 TGKVVV 382

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6GEP3|ZDH1_STAAR Zinc-type alcohol dehydrogenase-like protein SAR2277 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2277 PE=3 SV=1

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 29/207 (14%)

Query: 48  KTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107
           + P  ++ D+LV++ ++SVNP+D               RQ+E      V + P  LG D 
Sbjct: 24  RKPTPENDDILVKVNSISVNPVDTKQ------------RQME------VTQAPRVLGFDA 65

Query: 108 CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLY 167
            G + A GP VT  +  DVV+    P++QGS +   L   A+V K P NIS  EA  +  
Sbjct: 66  IGTVEAIGPNVTLFSPGDVVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPL 125

Query: 168 TGLTAWSALQITAALGLVYPRD--KRVLVLGASGGVGTMAVQLLKAWDIEVVTT------ 219
           TG+TA+     T  +      +  K VL++  +GGVG++A Q+ K + + V+TT      
Sbjct: 126 TGITAYETFFDTFKISHNPSENIGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQET 185

Query: 220 ---CSGDAKDLVTSLNPNLVIDYNEPE 243
              C     D+V +   +LV  + E E
Sbjct: 186 TEWCEKMGADIVLNHKEDLVRQFKEKE 212

Staphylococcus aureus (strain MRSA252) (taxid: 282458)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
242021033	360	zinc binding dehydrogenase, putative [Pe	0.919	0.977	0.485	8e-92
328713167	436	PREDICTED: reticulon-4-interacting prote	0.939	0.825	0.476	3e-87
193702448	383	PREDICTED: reticulon-4-interacting prote	0.937	0.937	0.480	6e-87
170038416	397	zinc binding dehydrogenase [Culex quinqu	0.913	0.881	0.428	2e-79
350400233	395	PREDICTED: reticulon-4-interacting prote	0.908	0.881	0.463	3e-79
307172598	358	Reticulon-4-interacting protein 1 [Campo	0.906	0.969	0.440	3e-79
157115285	397	zinc binding dehydrogenase [Aedes aegypt	0.903	0.871	0.430	7e-79
332021034	392	Reticulon-4-interacting protein 1, mitoc	0.913	0.892	0.431	1e-78
322787985	393	hypothetical protein SINV_07424 [Solenop	0.911	0.888	0.435	5e-78
156554190	393	PREDICTED: reticulon-4-interacting prote	0.906	0.882	0.453	6e-76

>gi|242021033|ref|XP_002430951.1| zinc binding dehydrogenase, putative [Pediculus humanus corporis] gi|212516171|gb|EEB18213.1| zinc binding dehydrogenase, putative [Pediculus humanus corporis]

 Score =  343 bits (880), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 173/356 (48%), Positives = 244/356 (68%), Gaps = 4/356 (1%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKS-KDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
           +WQ+ SYGG +ELQ   N + P++++  DV+V++ A SVNPIDVAM+ GYG+V+LN +RQ
Sbjct: 3   SWQVHSYGGLEELQLT-NSRIPVIRNPNDVIVQVSAASVNPIDVAMMSGYGSVLLNFMRQ 61

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTD-LNIDDVVYGVIQPHKQGSFSKLILAD 146
            ++CS+E  LEFPLTLGRDF G ++ KG  V D  +I D V+GV+   +QG  ++ +L  
Sbjct: 62  AKSCSLEETLEFPLTLGRDFSGIVIQKGHDVKDEFSIGDEVWGVVPVQEQGCHAEQVLVS 121

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAV 206
              + KKP+NIS  EAA + Y+ +TAWSAL+IT    L     K VL+LGASGGVGT+AV
Sbjct: 122 KNCIKKKPNNISATEAASIPYSAVTAWSALKITGGSALFPIAGKNVLILGASGGVGTVAV 181

Query: 207 QLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266
           Q++ +W   VV TCS DA  LV SL  N +I+Y E ++   I     YD+ILD AGI  +
Sbjct: 182 QMVSSWGGYVVATCSEDAIPLVESLGANEIINYKEKDSFEKIQ-KHKYDIILDCAGIGQN 240

Query: 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTI 326
               Y+  LK  KFSK++TL+SP L+N D  G++ G++KNA DL+  NF +G L KT+++
Sbjct: 241 NAAFYVKCLKDYKFSKYITLKSPMLQNIDEYGMIGGMMKNAADLILVNFNTGVLPKTSSV 300

Query: 327 RWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
           RWGFF+P+  A+ EI + +  G+IKP I   YNF +LP A++ VQ GHLRGK++++
Sbjct: 301 RWGFFIPLETALLEITEDVNNGKIKPNIQKTYNFSDLPEAYKHVQNGHLRGKVVVD 356

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328713167|ref|XP_001948169.2| PREDICTED: reticulon-4-interacting protein 1 homolog, mitochondrial-like [Acyrthosiphon pisum]

 Score =  328 bits (841), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 172/361 (47%), Positives = 236/361 (65%), Gaps = 1/361 (0%)

Query: 23  YSTRTAAWQISSYGGADELQFNDNVKTP-ILKSKDVLVEMKAVSVNPIDVAMLGGYGNVV 81
           +S++  AWQ  SY   D+L    N ++P ++ + +VLV +KA SVNP+DV M  G+G V+
Sbjct: 63  WSSKMIAWQAHSYSTIDDLVLTSNARSPTMVAAHEVLVRVKASSVNPLDVLMAEGFGQVL 122

Query: 82  LNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSK 141
           L ++RQ +  S+   +EFPLTLGRDFCG+I+AKG +V   ++ DVV GV+ P  QG  S+
Sbjct: 123 LGTIRQAQQMSLHKPVEFPLTLGRDFCGEIIAKGVKVKSFDVGDVVMGVVPPFHQGCHSE 182

Query: 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGV 201
            +     LV KKP +++ EEAAG+LYTG+TAWSAL++   L +    +K VLV+G SGGV
Sbjct: 183 FVAVPEGLVAKKPDHLTIEEAAGLLYTGMTAWSALKLVGGLYIWKATNKNVLVIGGSGGV 242

Query: 202 GTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA 261
           G  A+QLLK W  +V TTC   A +LV  L P+ VIDY   +A   +   G YD+ILDAA
Sbjct: 243 GNCAIQLLKHWGAKVTTTCDSTAINLVKGLGPDNVIDYTAKDARQQLEEHGKYDIILDAA 302

Query: 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321
           GI  ++I  Y P LK    S F+TLRSP L NTDS GLV G+VKNA DLL  N  SG + 
Sbjct: 303 GISYNKIGVYTPLLKGWACSTFITLRSPILHNTDSYGLVGGMVKNAIDLLVPNILSGAVF 362

Query: 322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           K ++IRWG F+PI   +KE+ K  E  +I   ++  + F +L  A+++VQ GHLRGK+I+
Sbjct: 363 KGSSIRWGTFLPIECGIKELAKLAEEKKILIPLEKTFKFKDLKDAYKRVQDGHLRGKVII 422

Query: 382 N 382
            
Sbjct: 423 T 423

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193702448|ref|XP_001948957.1| PREDICTED: reticulon-4-interacting protein 1 homolog, mitochondrial-like [Acyrthosiphon pisum]

 Score =  327 bits (838), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 175/364 (48%), Positives = 229/364 (62%), Gaps = 5/364 (1%)

Query: 23  YSTRTAAWQISSYGG-ADELQFNDNVKTPI-LKSKDVLVEMKAVSVNPIDVAMLGGYGNV 80
           +  R  AWQI +Y    D    ND  ++P  L  KDVLV ++A SVNPIDV M  GYG V
Sbjct: 15  WPERMTAWQIDTYAPFEDSATLNDKAESPASLGPKDVLVRVRASSVNPIDVLMAEGYGQV 74

Query: 81  VLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRV--TDLNIDDVVYGVIQPHKQGS 138
           +L+ +RQ +  S    +EFPLTLGRDF G++VAKG  V    LNI D + GV+ P++ G 
Sbjct: 75  LLSRVRQAKKKSFFRTVEFPLTLGRDFAGEVVAKGAEVGSEHLNIGDAILGVVAPYQHGC 134

Query: 139 FSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGAS 198
            ++ +      V KKP ++S EEAA +LYTGLT W AL     L      DK VLV+G S
Sbjct: 135 HAQFVTVPITQVAKKPDHMSYEEAACLLYTGLTTWCALTSAGGLNSSNAADKNVLVIGGS 194

Query: 199 GGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVIL 258
           GGVG  A+Q+LK+W  +V TTCS +A +LV  L P+ +IDY   +A   +   G YD+IL
Sbjct: 195 GGVGNSAIQILKSWGAKVTTTCSTNAINLVKGLGPDNIIDYTTADAQKQLEQFGKYDLIL 254

Query: 259 DAAGIPLDQI-NSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317
           DAAGIP   I  SY P LK   ++KFVTLRSP L NTD+ G+V G++KNAFDL+  N  S
Sbjct: 255 DAAGIPYGDIGGSYTPLLKPWSWAKFVTLRSPVLHNTDAYGMVFGMLKNAFDLVAPNVCS 314

Query: 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRG 377
           G + K +TIRWGFFMP    V+E+ +     +I   IDS Y F ++  AF KV+ GHLRG
Sbjct: 315 GAVFKGSTIRWGFFMPAEQGVEELARLSAEKKITVPIDSVYEFADMKEAFGKVKAGHLRG 374

Query: 378 KIIL 381
           K+++
Sbjct: 375 KVVV 378

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170038416|ref|XP_001847046.1| zinc binding dehydrogenase [Culex quinquefasciatus] gi|167882089|gb|EDS45472.1| zinc binding dehydrogenase [Culex quinquefasciatus]

 Score =  302 bits (773), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 160/373 (42%), Positives = 241/373 (64%), Gaps = 23/373 (6%)

Query: 21  LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKD-VLVEMKAVSVNPIDVAMLGGYGN 79
           L+  ++ + WQI SYG  DE+Q++D++K P+L+S + VLV++ A SVNPIDVAM+ GYG 
Sbjct: 36  LRPVSKMSGWQIHSYGALDEIQYSDSLKMPVLRSPNQVLVKVTASSVNPIDVAMIKGYGA 95

Query: 80  VVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVT--DLNIDDVVYGVIQPHKQG 137
            VLN++R       +  +EFPLTLGRDFCG+IV KG  ++  DL+I D V+GV+    QG
Sbjct: 96  TVLNAMR------CKDGIEFPLTLGRDFCGEIVQKGLGLSSRDLDIGDEVWGVVPLQNQG 149

Query: 138 SFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG----LVYP----RD 189
           S ++ ++ D   V KKP N+S  +A+ VLY GLTAWSAL +T  LG     + P    R 
Sbjct: 150 SHAEYVVVDRYCVSKKPENLSKIDASAVLYAGLTAWSALYLTGHLGNLMGAISPVGGGRG 209

Query: 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIA 249
           K+VLVLGA+GGVGT+AVQ+L A  +EV  TCS DA ++V  L  + V+DYN+P  +  +A
Sbjct: 210 KKVLVLGATGGVGTLAVQMLVAEGVEVYATCSTDAVEMVQHLGVDYVLDYNDPAHVQQLA 269

Query: 250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD 309
             G +D+ILD AG   D   + +P+    +F +++TL SP LKN D  G   G+ +NA  
Sbjct: 270 SVGRFDIILDCAGKGTDYAGA-VPW----RFEQYITLNSPVLKNIDESGFATGMYQNAVS 324

Query: 310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEK 369
           L+++N  S    +   ++WG+F+P P  +  + K +E+G++ P+ +  + F ++  A+ +
Sbjct: 325 LVRNNVASVS-GQNGLVKWGYFVPAPQGIAYLQKLVEKGKLLPIAEKVFPFEQMLEAYSR 383

Query: 370 VQQGHLRGKIILN 382
           V   HLRGKI+++
Sbjct: 384 VDAKHLRGKIVID 396

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400233|ref|XP_003485775.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Bombus impatiens]

 Score =  301 bits (772), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 169/365 (46%), Positives = 236/365 (64%), Gaps = 17/365 (4%)

Query: 26  RTAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNS 84
           +  AWQI SYGG +EL+ + NV+ P++ K  D+LV+++A SVN ID+AM  GYG V+LN 
Sbjct: 38  KMQAWQIHSYGGLEELKLS-NVRIPVIAKPTDILVKVEASSVNSIDIAMTKGYGAVMLNL 96

Query: 85  LRQLE--TCSVEPVLEFPLTLGRDFCGKIVAKGPRVTD-LNIDDVVYGVIQPHKQGSFSK 141
           +R+    T      LE PLTLGRDF G +V+KG  V D L + D V+GV+   +QG  + 
Sbjct: 97  MRKARNLTSGQYGELELPLTLGRDFSGIVVSKGHGVGDRLMLGDEVWGVVPVEQQGCHAG 156

Query: 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL----GLVYPRDKRVLVLGA 197
            ++ D+  V  +P N+S  EAA +LY GLTAWSAL IT AL     +   R+ RVLV+G 
Sbjct: 157 YVVVDNKSVSLRPRNLSYIEAASILYAGLTAWSALWITGALCYKTRMATRRNNRVLVIGG 216

Query: 198 SGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVI 257
           SGGVGT+AVQLLKAW++ V+TTCS DA ++V  L P++VIDY    A   I   GPY++I
Sbjct: 217 SGGVGTIAVQLLKAWNMHVITTCSSDAVNMVQKLGPDVVIDYKLDGADSRIIAEGPYNII 276

Query: 258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317
           LD A    DQI      L+    S ++TL SP LKNTD  GL+ G VKN  +L+K N   
Sbjct: 277 LDCANQGADQIR-----LRGYPHSTYITLNSPVLKNTDQHGLIVGTVKNIGELVKYNI-- 329

Query: 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRG 377
             +   +T++WGFF+P    +K + +F+E G++ PV+   Y F +LP A+++V QGHLRG
Sbjct: 330 -PIENKSTVKWGFFIPSAAGIKTLKEFVESGKVVPVVKKVYQFQDLPLAYDRVTQGHLRG 388

Query: 378 KIILN 382
           K++++
Sbjct: 389 KLVID 393

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172598|gb|EFN63957.1| Reticulon-4-interacting protein 1 [Camponotus floridanus]

 Score =  301 bits (772), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 159/361 (44%), Positives = 230/361 (63%), Gaps = 14/361 (3%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           AWQ+ SY G ++L+ ++     I++  DVLV+++A SVNPIDV+M  GYG  VLN +R+ 
Sbjct: 3   AWQVHSYNGLEDLRLSNVTMPVIMQPTDVLVKVEAASVNPIDVSMTNGYGITVLNLMRKA 62

Query: 89  ETC--SVEPVLEFPLTLGRDFCGKIVAKGPRVTD-LNIDDVVYGVIQPHKQGSFSKLILA 145
           +         L+ PLTLGRDF G IV+KG  V D L +   V+GV+   +QG  +  ++ 
Sbjct: 63  KNLIDGTYNGLDLPLTLGRDFVGVIVSKGNNVGDRLELGKEVWGVVPVEQQGCHANYVVV 122

Query: 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG----LVYPRDKRVLVLGASGGV 201
           +S LV+ +P N+S  EAA +L+ GLTAWSAL IT  L     +V   ++RVLV+G SGGV
Sbjct: 123 NSNLVNPRPQNLSHTEAASILFAGLTAWSALWITGGLAYKTAIVTRLNRRVLVIGGSGGV 182

Query: 202 GTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA 261
           GT+A+QLLKAW++ V++TC+ DA D++ +L  ++VIDYN+  A   I   GPYD+ILD  
Sbjct: 183 GTLAIQLLKAWNMHVISTCNSDAMDMLQNLGADIVIDYNQDNADTKIISEGPYDIILDCT 242

Query: 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321
               +Q   Y+  +K    S ++ L SP L+NTD  GL+ G+ KN  D LK N   GE  
Sbjct: 243 ----NQGPEYVR-MKGYPHSTYIGLNSPLLRNTDQHGLIVGMAKNMQDFLKFNIPKGE-- 295

Query: 322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
               ++WGFF+P    +  + K +E GQI P+I   Y F +LP A+EK++QGHLRGK+++
Sbjct: 296 NKGCVKWGFFIPSQTGINVLQKLVENGQIVPIIQQVYPFQDLPLAYEKIRQGHLRGKLVI 355

Query: 382 N 382
           +
Sbjct: 356 D 356

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157115285|ref|XP_001658181.1| zinc binding dehydrogenase [Aedes aegypti] gi|108883504|gb|EAT47729.1| AAEL001183-PA [Aedes aegypti]

 Score =  300 bits (768), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 159/369 (43%), Positives = 234/369 (63%), Gaps = 23/369 (6%)

Query: 25  TRTAAWQISSYGGADELQFNDNVKTPILKSKD-VLVEMKAVSVNPIDVAMLGGYGNVVLN 83
           ++   WQI SYG  +E+QF+DN+K P+L S + +LV++ A SVNPIDVAM+ GYG  VLN
Sbjct: 39  SKMCGWQIHSYGSLEEVQFSDNLKMPVLTSPNQLLVKVTAASVNPIDVAMIKGYGAAVLN 98

Query: 84  SLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVT--DLNIDDVVYGVIQPHKQGSFSK 141
           ++R       +  +EFPLTLGRDFCG+IV KG  V+  DL++ D V+GV   H+QGS ++
Sbjct: 99  TMR------CKSGIEFPLTLGRDFCGEIVQKGMGVSSRDLDVGDEVWGVCPVHQQGSHAE 152

Query: 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG----LVYP----RDKRVL 193
            ++ +   + KKP N+S  +A+ VLY GLTAWS L +T  LG     + P    R K+VL
Sbjct: 153 YVVVERYCLSKKPENLSKIDASAVLYAGLTAWSGLYLTGQLGNLLGAISPVGGGRGKKVL 212

Query: 194 VLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGP 253
           VLGA+GGVGT+AVQ+L A  +EV  TCS DA ++V +L    V DYNEP  +  +A  G 
Sbjct: 213 VLGAAGGVGTLAVQILLAEGVEVYATCSTDAVEMVQNLGVRYVSDYNEPAHVQQLASVGK 272

Query: 254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS 313
           +D+ILD AG   D   S +P+    +F +++T  SP LKN D  G   G+V+NA  ++++
Sbjct: 273 FDIILDCAGKGTDYATS-VPW----RFEQYITFNSPVLKNIDDNGFATGMVQNAVCIVRN 327

Query: 314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQG 373
           N  +        ++WG+F+P P  +  + K +E G++ PVI+  + F     A+ +V + 
Sbjct: 328 NLATVS-AHNGLVKWGYFVPAPQGIAYLQKLVEHGKLLPVIEKVFTFDGTSEAYARVDEK 386

Query: 374 HLRGKIILN 382
           HLRGKI+++
Sbjct: 387 HLRGKIVID 395

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021034|gb|EGI61423.1| Reticulon-4-interacting protein 1, mitochondrial [Acromyrmex echinatior]

 Score =  300 bits (767), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 158/366 (43%), Positives = 233/366 (63%), Gaps = 16/366 (4%)

Query: 25  TRTAAWQISSYGGADELQFNDNVKTPILKS-KDVLVEMKAVSVNPIDVAMLGGYGNVVLN 83
            +  AWQI SY G ++L+ + N++ P++ +  DVLV+++A SVNPIDVAM  GYGN  LN
Sbjct: 33  NKMQAWQIHSYNGLEDLRLS-NIRIPVITNPTDVLVKIEAASVNPIDVAMTDGYGNTFLN 91

Query: 84  SLRQLETCSVEPV--LEFPLTLGRDFCGKIVAKGPRVTD-LNIDDVVYGVIQPHKQGSFS 140
            LR+ ++     +  L+ PLTLGRDF G +V+KG  V D L I   V+GV+   +QG  +
Sbjct: 92  VLRKTKSLFFRTLGELDLPLTLGRDFAGIVVSKGCNVGDRLEIGKEVWGVVPIEQQGCHA 151

Query: 141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL----GLVYPRDKRVLVLG 196
             ++ DS+LV+ +P  +S  EAA +LY GLTAWSAL IT  L     +    +KRVLV+G
Sbjct: 152 NYVIVDSSLVNPRPQKLSHIEAASILYAGLTAWSALWITGGLFYKMAIAVRMNKRVLVMG 211

Query: 197 ASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDV 256
            SGGVGT+A+QLLKAW++ V++TCS DA +++ +L+ ++VIDY +  A   I   GPYD+
Sbjct: 212 GSGGVGTLAIQLLKAWNMHVISTCSSDAVEMLQNLDTDVVIDYKKDSADAEIISEGPYDI 271

Query: 257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316
           ILD A +  + +      +K      ++ L SP L N D  GL+ G+ KN  DLLK N  
Sbjct: 272 ILDCAKLGPEYVR-----MKGYPHDNYIALNSPLLNNFDHHGLIMGMAKNLEDLLKFNIP 326

Query: 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLR 376
             E    + ++WGFF+P    +  + K +E  +I PVI   Y+F +LP A+E+++QGHLR
Sbjct: 327 KAE--NKSCVKWGFFIPSQTGINVLQKLVENEEIVPVIQQVYSFQDLPQAYERLRQGHLR 384

Query: 377 GKIILN 382
           GK++++
Sbjct: 385 GKLVID 390

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787985|gb|EFZ13826.1| hypothetical protein SINV_07424 [Solenopsis invicta]

 Score =  297 bits (761), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 159/365 (43%), Positives = 235/365 (64%), Gaps = 16/365 (4%)

Query: 26  RTAAWQISSYGGADELQFNDNVKTPILKS-KDVLVEMKAVSVNPIDVAMLGGYGNVVLNS 84
           +  AWQI S+ G ++L+ + NV+ PI+ +  DVLV+++A SVNPIDVAM  GYGN +LN 
Sbjct: 35  KMQAWQIHSFNGLEDLKLS-NVRIPIITNPTDVLVKIEAASVNPIDVAMTDGYGNTLLNV 93

Query: 85  LRQLETCSVEPV--LEFPLTLGRDFCGKIVAKGPRVTD-LNIDDVVYGVIQPHKQGSFSK 141
           +R+ +  +      L+ PLTLGRDF G +V+KG  V + L + + V+GVI   +QG  + 
Sbjct: 94  MRKTKNLAFGKFEELDLPLTLGRDFAGVVVSKGFSVDNRLKLGEEVWGVIPIEQQGCHAN 153

Query: 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL----GLVYPRDKRVLVLGA 197
            ++ DS+LV+ +P  +S  EAA +LY GLTAWSAL IT  L     +V   ++RVLV+G 
Sbjct: 154 YVVVDSSLVNPRPQKLSYIEAASILYAGLTAWSALWITGGLCYKTTIVTRLNRRVLVMGG 213

Query: 198 SGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVI 257
           SGGVGT+A+QLLKAW++ V++TCS DA +++ +L  ++VIDY +  A   I   GPYD+I
Sbjct: 214 SGGVGTLAIQLLKAWNMHVISTCSSDAVEMLQNLGADVVIDYKQDNADAEIISEGPYDMI 273

Query: 258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317
           LD A    + +      +K      ++TL SP LKN D  GL+ G+V+N  DLLK N   
Sbjct: 274 LDCANQGPEHVR-----IKGYPHDTYITLNSPLLKNVDHHGLIMGMVRNFGDLLKFNIPK 328

Query: 318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRG 377
            E    + ++WGFFMP    +  + K +E  +I PV+   Y F +LP A+E+++QGHLRG
Sbjct: 329 AE--NKSCVKWGFFMPSRIGINFLQKLVENEEIVPVVQQVYPFQDLPQAYERLKQGHLRG 386

Query: 378 KIILN 382
           K++++
Sbjct: 387 KLVID 391

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156554190|ref|XP_001600089.1| PREDICTED: reticulon-4-interacting protein 1 homolog, mitochondrial-like [Nasonia vitripennis]

 Score =  290 bits (743), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 166/366 (45%), Positives = 233/366 (63%), Gaps = 19/366 (5%)

Query: 26  RTAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNS 84
           R  AWQI SYG   EL+ +  VK P+L +  D+L++++A SVNPIDVAM+GGYG+ V+N 
Sbjct: 36  RMQAWQIHSYGSLHELKLS-TVKMPVLSRPSDILIKVEAASVNPIDVAMIGGYGSKVINL 94

Query: 85  LRQLETCSVEPV--LEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
           +R+ ++C   P   +EFPL +GRDF G +V+KG  V +L I D V+GV+   +QG  +  
Sbjct: 95  MRKAKSCQGRPYSDIEFPLVMGRDFSGTVVSKGHGVDELKIGDKVWGVVPVEQQGCHADY 154

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL----GLVYPRDKRVLVLGAS 198
           ++ DS LV  +P N+S  EAA +LY GLTAWSAL  T  L          +KRVLVLG S
Sbjct: 155 VIVDSCLVSLRPKNLSYIEAASILYAGLTAWSALWYTGGLCYKTAFATQMNKRVLVLGGS 214

Query: 199 GGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVIL 258
           GGVGT+A+QLLKAW+++VVTTC+ DA D++  L  ++VIDY + +A   +   GPY++IL
Sbjct: 215 GGVGTLAIQLLKAWNMQVVTTCNTDATDMLQDLGADVVIDYKQQDADSKVIAEGPYNIIL 274

Query: 259 DAAGIPLDQINSYLPFLKTGKF--SKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316
           D         N     +K+  +    ++TL SP LKN D  GL+ G VKN  DLLK N  
Sbjct: 275 DCC-------NQGAVLVKSKGYPHCNYITLNSPLLKNVDEHGLIFGAVKNLGDLLKHNIP 327

Query: 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLR 376
             E  K + ++WGFF P P  +  I + +E  +I PV+   + F ELP A+E+V+ GHLR
Sbjct: 328 VNE--KKSLVKWGFFAPSPSGITHIQELVEHKKIIPVVQEVFPFEELPKAYERVRDGHLR 385

Query: 377 GKIILN 382
           GKI+++
Sbjct: 386 GKIVVD 391

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
FB|FBgn0031500	413	CG17221 [Drosophila melanogast	0.911	0.845	0.421	1.3e-70
ZFIN|ZDB-GENE-040426-1314	387	rtn4ip1 "reticulon 4 interacti	0.911	0.901	0.383	3.1e-60
UNIPROTKB|Q8WWV3	396	RTN4IP1 "Reticulon-4-interacti	0.921	0.891	0.379	5.7e-59
UNIPROTKB|F6V4D2	426	RTN4IP1 "Uncharacterized prote	0.924	0.830	0.375	2.5e-58
UNIPROTKB|Q0VC50	396	RTN4IP1 "Reticulon-4-interacti	0.924	0.893	0.372	3.2e-58
UNIPROTKB|F1NL88	390	RTN4IP1 "Uncharacterized prote	0.908	0.892	0.387	6.6e-58
UNIPROTKB|F1RT47	396	LOC100627610 "Uncharacterized	0.919	0.888	0.375	1.1e-57
UNIPROTKB|E2QRQ9	397	RTN4IP1 "Uncharacterized prote	0.924	0.891	0.373	2.2e-57
RGD|1563384	396	Rtn4ip1 "reticulon 4 interacti	0.921	0.891	0.379	1.2e-56
MGI|MGI:2178759	396	Rtn4ip1 "reticulon 4 interacti	0.921	0.891	0.379	1.6e-56

FB|FBgn0031500 CG17221 [Drosophila melanogaster (taxid:7227)]

 Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
 Identities = 156/370 (42%), Positives = 222/370 (60%)

Query:    22 KYSTRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNV 80
             K + +   WQ+ +YG  DELQ ++ +K P ++ S + LV ++A +VNPID+AML GYG  
Sbjct:    47 KSADKMRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIRATAVNPIDLAMLRGYGAT 106

Query:    81 VLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQ-GSF 139
             VLN +R    C     +EFPL LGR+FCG++V  G  V+ L +   V+GV+      GS 
Sbjct:   107 VLNKMR----CQPGDGIEFPLILGREFCGELVQTGMGVS-LPLGSRVWGVVPLQATIGSH 161

Query:   140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRD--------KR 191
             ++ +   S  +   P  + D EAA VLY GLTAWS L IT  LG              KR
Sbjct:   162 AEYVAVPSYCLAPAPKELDDYEAASVLYAGLTAWSGLYITGGLGGPCGATTASGGGAHKR 221

Query:   192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA 251
             VLVLG SGGVGT+A+Q+LK+  ++V+ TCS +A ++V +L  +LV+DYN P+AM  +   
Sbjct:   222 VLVLGGSGGVGTLAIQILKSQKVQVLATCSENAIEMVRNLGADLVVDYNNPQAMEELCKY 281

Query:   252 GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL 311
              PYD++LD AG    Q        K   F +++T  SP L N D  GL  G +KN FDL 
Sbjct:   282 APYDIVLDCAG----QGGQKAAESKYD-FRQYITFSSPLLANIDKQGLGVGALKNVFDLF 336

Query:   312 KSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQ 371
             ++N  S    +   ++WGFF P P  ++ + K +E+ ++ P+IDS Y F ELP AFEK++
Sbjct:   337 QTNVRSVTQ-RGGLVKWGFFSPAPQGIQFLQKLVEQRKLMPLIDSSYGFSELPKAFEKMK 395

Query:   372 QGHLRGKIIL 381
              GHLRGKI++
Sbjct:   396 SGHLRGKIVV 405

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016319 "mushroom body development" evidence=IMP

ZFIN|ZDB-GENE-040426-1314 rtn4ip1 "reticulon 4 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 136/355 (38%), Positives = 203/355 (57%)

Query:    29 AWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
             AW I  YG  D L+F  N   PI+    +V+V++ A  +NPID++M GGYG   +   R 
Sbjct:    31 AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRD 90

Query:    88 LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                 S +   EFPL LGRD  G+I+  G  V      D V+  I P KQGS ++ ++   
Sbjct:    91 PLNIS-QSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWKQGSLAEFVVVSG 149

Query:   148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
               V  KP ++  +EAA + Y   TAWSA+  T  L       KRVL+LG SGGVGT A+Q
Sbjct:   150 NEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQ 209

Query:   208 LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267
             ++KAW   V  TCS +A+ LV  L  + V+DY        +     +D+ILD+ G   ++
Sbjct:   210 MVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGGETEK 269

Query:   268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR 327
                 L  LK    +KFVTL +PFL+NTD LGL  G++++A  +     ++  L K    R
Sbjct:   270 WA--LDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTVGCKVVKN--LRKGVHYR 325

Query:   328 WGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
             WGFF P   A+ E+++ ++ G+++PV++  ++F ++P AF+KV+QGH RGK +++
Sbjct:   326 WGFFAPSGSALDEVSEMVDAGKVRPVVEEVFSFAQVPEAFQKVEQGHARGKTVVS 380

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q8WWV3 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 137/361 (37%), Positives = 195/361 (54%)

Query:    24 STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
             ST   AW I  YG  + L+F  N+  PI+    +V+V++ A SVNPIDV M  GYG   L
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATAL 99

Query:    83 NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
             N  R      ++   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct:   100 NMKRDPLHVKIKGE-EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEF 158

Query:   143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
             ++     V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVG
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 218

Query:   203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
             T A+Q++KAWD  V   CS DA +LV  L  + VIDY        +    P+D ILD  G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG 278

Query:   263 IPLDQINSYLP-FLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321
                    ++ P FLK    + +VTL +PFL N D LG+  G+++    +     +     
Sbjct:   279 ---GSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALK--HFW 333

Query:   322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
             K    RW FFM     + +I + ++ G+I+PVI+  + F ++P AF KV++GH RGK ++
Sbjct:   334 KGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 393

Query:   382 N 382
             N
Sbjct:   394 N 394

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F6V4D2 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 135/360 (37%), Positives = 194/360 (53%)

Query:    24 STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
             ST   AW I  YG  + L+F  N+  P++    +V++++ A SVNPIDV M  GYG   L
Sbjct:    70 STVMPAWVIDKYGKNEVLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 129

Query:    83 NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
             N  R       +   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct:   130 NMKRDPLHIKTKGE-EFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEF 188

Query:   143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
             ++ +   V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVG
Sbjct:   189 VVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 248

Query:   203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
             T A+Q++KAWD  V   CS DA +LV  L  + VIDY        +    P+D ILD  G
Sbjct:   249 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSLKPFDFILDNVG 308

Query:   263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
                +     L FLK    + +VTL +PFL N D LG+  G+++    +     +     +
Sbjct:   309 GSTE--TWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALK--HFWQ 364

Query:   323 TNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
                 RW FFM     + +I K ++ G+I+PVI+  + F ++P AF KV++GH RGK ++N
Sbjct:   365 GVHYRWAFFMASGLYLDDIAKLVDEGKIRPVIEKTFPFSQVPEAFLKVERGHARGKTVIN 424

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q0VC50 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 134/360 (37%), Positives = 195/360 (54%)

Query:    24 STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
             ST   AW I  YG  + L+F  N+  P++    +V++++ A S+NPIDV M  GYG   L
Sbjct:    40 STVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATAL 99

Query:    83 NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
             N  R      ++   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct:   100 NMKRDPLHVKIKGE-EFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEF 158

Query:   143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
             ++     V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVG
Sbjct:   159 VVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVG 218

Query:   203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
             T A+Q++KAWD  V   CS DA +LV  L  + VIDY        +  + P+D ILD  G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVG 278

Query:   263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
                +     L FLK    + +VTL +PFL N D LG+  G+++    +     +     +
Sbjct:   279 GSTE--TWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLK--HFWQ 334

Query:   323 TNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
                 RW FFM     + +I + +E G+I+PVI+  + F ++P AF KV++GH RGK ++N
Sbjct:   335 GVHYRWAFFMASGPCLDDIAELVEAGKIQPVIEKTFPFSKVPEAFLKVERGHARGKTVIN 394

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1NL88 RTN4IP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 138/356 (38%), Positives = 201/356 (56%)

Query:    29 AWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
             +W I  YG  + L+F  ++  P+++   +V+V++ A S+NPID++M  GYG   LN  R 
Sbjct:    36 SWVIDRYGRNEVLRFTRDMVFPVIQYPNEVIVKVHAASLNPIDLSMRSGYGATALNMKRD 95

Query:    88 -LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILAD 146
              L+  S++   EFPLTLGRD  G I+  G  V+     D V+  I P KQG+ S+ ++A 
Sbjct:    96 PLKIKSMDT--EFPLTLGRDASGVIMECGLSVSYFKPGDEVWAAIPPWKQGTLSEFVVAS 153

Query:   147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAV 206
             +  V  KP  +S  EAA + Y GLTAWSA+     L       KRVL+LGASGGVGT AV
Sbjct:   154 ANEVSFKPKCLSHVEAASLPYVGLTAWSAINKVGGLNQSNCSGKRVLILGASGGVGTFAV 213

Query:   207 QLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266
             QL+KAW   V   CS DA  L+  L  + VIDY        +     +D ILD  G   +
Sbjct:   214 QLVKAWGAHVTAVCSHDAGTLMRKLGADDVIDYKSGSLEQQLKTLPSFDFILDNVGGSTE 273

Query:   267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTI 326
             +    L  LK    + +VTL +PFL N D LG+  G+++    +     +   L K    
Sbjct:   274 KWA--LDLLKKWSGATYVTLVTPFLINVDRLGVADGMLQTGVTIGSKTVK--HLLKGVHY 329

Query:   327 RWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
             RW FFMP   ++ EI + ++ G+I+PVI+  + F E+P AF+K+++GH RGK +++
Sbjct:   330 RWAFFMPSGPSLDEIAQLVDSGKIQPVIEQVFPFSEVPKAFQKLEEGHARGKTVID 385

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1RT47 LOC100627610 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 135/360 (37%), Positives = 196/360 (54%)

Query:    24 STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
             ST   AW I  YG  + L+F  N+  P++    +V++++ A S+NPIDV M  GYG   L
Sbjct:    40 STVMPAWVIDKYGNNEVLRFTQNMMLPMIHYPNEVVIKVHAASINPIDVNMRSGYGATAL 99

Query:    83 NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
             N  R      ++   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct:   100 NMKRDPLHIRIKGE-EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEF 158

Query:   143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
             ++     V  KP +++  +AA + Y  LTAWSA+     L     R KRVL+LGASGGVG
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCRGKRVLILGASGGVG 218

Query:   203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
             T A+Q++KAWD  V   CS DA +LV  L  + VIDY        +    P+D ILD  G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNMEEQLKSFKPFDFILDNVG 278

Query:   263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
                +     L FLK    + +VTL +PFL N D LG+  G+++    +     +     +
Sbjct:   279 GSTE--TWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLK--HFWQ 334

Query:   323 TNTIRWGFFMPI-PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
                 RW FFM   PY + +I + ++ G+I+PVI+  + F ++P AF KV++GH RGK ++
Sbjct:   335 GVHYRWAFFMASGPY-LDDIAELVDAGKIQPVIEKTFPFSKVPEAFLKVERGHARGKTVI 393

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2QRQ9 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 135/361 (37%), Positives = 194/361 (53%)

Query:    24 STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
             ST   AW I  YG  + L+F  N+  P++    +V++++ A SVNPIDV M  GYG   L
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    83 NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
             N  R       +   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct:   100 NMKRDPLHIKTKGE-EFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEF 158

Query:   143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
             ++ +   V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVG
Sbjct:   159 VVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 218

Query:   203 TMAVQ-LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA 261
             T A+Q ++KAWD  V   CS DA +LV  L  + VIDY        +    P+D ILD  
Sbjct:   219 TFAIQQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSLKPFDFILDNV 278

Query:   262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321
             G   +     L FLK    + +VTL +PFL N D LG+  G+++    +     +     
Sbjct:   279 GGSTE--TWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALK--HFW 334

Query:   322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
             +    RW FFM     + +I K ++ G+I+PVI+  + F ++P AF KV++GH RGK ++
Sbjct:   335 QGVHYRWAFFMASGLYLDDIAKLVDEGKIRPVIEKTFPFSQVPEAFLKVERGHARGKTVI 394

Query:   382 N 382
             N
Sbjct:   395 N 395

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|1563384 Rtn4ip1 "reticulon 4 interacting protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 137/361 (37%), Positives = 193/361 (53%)

Query:    24 STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
             ST   AW I  YG  + L+F  N+  PI+    +V++++ A SVNPIDV M  GYG   L
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    83 NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
             N  R       +   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct:   100 NMKRDPLHMKTKGE-EFPLTLGRDVSGVVMECGLDVRYFQPGDEVWAAVPPWKQGTLSEF 158

Query:   143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
             ++     V  KP +++  +AA + Y  LTAWSA+     L       KR L+LGASGGVG
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNAKNCMGKRALILGASGGVG 218

Query:   203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
             T A+Q++KAW   V   CS DA +LV  L  + VIDY        +     +D ILD  G
Sbjct:   219 TFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTMGSVEEQLKSLKLFDFILDNVG 278

Query:   263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
                +     L FLK    + +VTL +PFL N D LG+  G+++    +     +   L +
Sbjct:   279 GSTE--TWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGTKALK--HLWQ 334

Query:   323 TNTIRWGFFMPI-PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
                 RW FFM   PY + EI + ++ G+I+PVI+  + F E+P AF KV++GH RGK ++
Sbjct:   335 GVHYRWAFFMASGPY-LDEIAELVDGGKIRPVIERTFPFSEVPEAFLKVERGHARGKTVV 393

Query:   382 N 382
             N
Sbjct:   394 N 394

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

MGI|MGI:2178759 Rtn4ip1 "reticulon 4 interacting protein 1" [Mus musculus (taxid:10090)]

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 137/361 (37%), Positives = 194/361 (53%)

Query:    24 STRTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
             ST   AW I  YG  + L+F  N+  PI+    +V++++ A SVNPIDV M  GYG   L
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    83 NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
             N  R       +   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ 
Sbjct:   100 NMKRDPLHMKTKGE-EFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWKQGTLSEF 158

Query:   143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
             ++     V  KP +++  +AA + Y  LTAWSA+     L     + KR L+LGASGGVG
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVG 218

Query:   203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG 262
             T A+Q++KAW   V   CS DA +LV  L  + VIDY        +     +D ILD  G
Sbjct:   219 TFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVG 278

Query:   263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
                +     L FLK    + +VTL +PFL N D LG+  G+++    +     +   L +
Sbjct:   279 GSTE--TWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALK--HLWQ 334

Query:   323 TNTIRWGFFMPI-PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
                 RW FFM   PY + EI + ++ G+I+PVI+  + F E+P AF KV++GH RGK ++
Sbjct:   335 GVHYRWAFFMASGPY-LDEIAELVDAGKIRPVIERTFPFSEVPEAFLKVERGHARGKTVV 393

Query:   382 N 382
             N
Sbjct:   394 N 394

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54II4	RT4I1_DICDI	No assigned EC number	0.2618	0.8772	0.9545	yes	N/A
Q7T3C7	RT4I1_DANRE	No assigned EC number	0.3830	0.9112	0.9018	yes	N/A
Q8WWV3	RT4I1_HUMAN	No assigned EC number	0.3795	0.9216	0.8914	yes	N/A
Q924D0	RT4I1_MOUSE	No assigned EC number	0.375	0.9242	0.8939	yes	N/A
Q0VC50	RT4I1_BOVIN	No assigned EC number	0.3722	0.9242	0.8939	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	383
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-149
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-76
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	5e-74
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-54
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	6e-45
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	8e-42
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	4e-40
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-39
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-36
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	3e-35
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-34
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-34
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-33
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	3e-33
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	9e-33
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	7e-32
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	7e-32
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	7e-31
smart00829	287	smart00829, PKS_ER, Enoylreductase	9e-31
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	7e-28
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-27
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-26
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	3e-24
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	3e-23
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-22
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	5e-22
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-19
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-18
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-18
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-17
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-16
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-16
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	1e-15
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-15
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	4e-15
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	9e-14
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-13
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	4e-13
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	5e-13
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	9e-13
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-12
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	3e-12
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	7e-12
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	5e-11
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-10
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	3e-10
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-10
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	4e-10
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	5e-10
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	6e-10
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	7e-10
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	7e-10
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	9e-10
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-09
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	2e-09
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	3e-09
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	6e-09
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	1e-08
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-08
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-08
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	8e-08
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-07
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	3e-07
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	3e-07
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-07
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	4e-07
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	6e-07
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-06
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-06
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-05
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	3e-05
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	4e-05
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	7e-05
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	6e-04
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	6e-04
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	7e-04
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	0.001
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	0.003

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  425 bits (1094), Expect = e-149
 Identities = 172/355 (48%), Positives = 216/355 (60%), Gaps = 8/355 (2%)

Query: 29  AWQISSYGGADELQFNDNVKTP-ILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
           AWQI SYGG D L   +N + P I K   VL+++ A SVNPIDV M  GYG  +LN  R+
Sbjct: 3   AWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRK 62

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
            ++C    + EFPLTLGRD  G +V  G  V    I D V+G + P  QG+ ++ ++   
Sbjct: 63  PQSCKYSGI-EFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPE 121

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             V KKP N+S EEAA + Y GLTAWSAL     L       KRVL+LG SGGVGT A+Q
Sbjct: 122 NEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQ 181

Query: 208 LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267
           LLKAW   V TTCS DA  LV SL  + VIDYN  +    +   G +DVILD  G   ++
Sbjct: 182 LLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGDTEK 241

Query: 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR 327
               L  LK  K   +VTL SP LKNTD LGLV G++K+A DLLK N +S  L K +  R
Sbjct: 242 --WALKLLK--KGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKS--LLKGSHYR 295

Query: 328 WGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
           WGFF P   A+ E+ K +E G+IKPVID  + F E+P A+EKV+ GH RGK ++ 
Sbjct: 296 WGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  238 bits (611), Expect = 1e-76
 Identities = 103/353 (29%), Positives = 162/353 (45%), Gaps = 46/353 (13%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A +I  YGG + L+  D V TP     +VLV++ A  VNP+D+ +  G            
Sbjct: 3   AVRIHEYGGPEVLELAD-VPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFP----- 56

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
                   L  PL  G D  G +VA GP VT   + D V+G+    + G++++ ++  + 
Sbjct: 57  --------LTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPAD 108

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            +  KP+N+S EEAA +   GLTAW AL     L       + VL+ GA+GGVG+ AVQL
Sbjct: 109 ELALKPANLSFEEAAALPLAGLTAWQALFELGGLK----AGQTVLIHGAAGGVGSFAVQL 164

Query: 209 LKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQI 268
            KA    V+ T S    D + SL  + VIDY + +   + A  G  D +LD  G   + +
Sbjct: 165 AKARGARVIATASAANADFLRSLGADEVIDYTKGDFERAAAP-GGVDAVLDTVGG--ETL 221

Query: 269 NSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW 328
              L  +K G   + V++  P                          E     +     +
Sbjct: 222 ARSLALVKPG--GRLVSIAGP-----------------------PPAEQAAKRRGVRAGF 256

Query: 329 GFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
            F  P    + E+ + +E G+++PV+D  +   +   A E+++ GH RGK++L
Sbjct: 257 VFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  232 bits (594), Expect = 5e-74
 Identities = 116/355 (32%), Positives = 171/355 (48%), Gaps = 39/355 (10%)

Query: 30  WQISSYGGADELQ-FNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
              + YG  + L      V  P  K  +VLV++ A SVNP+D  +  G   ++L      
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLL------ 54

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
                     FP   G DF G++VA G  VT   + D V+G + P   G+ ++ ++A  +
Sbjct: 55  -------GRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPES 107

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            + KKP  +S EEAA +   GLTA  AL+     G V P  +RVL+ GASGGVGT AVQ+
Sbjct: 108 GLAKKPEGVSFEEAAALPVAGLTALQALR---DAGKVKP-GQRVLINGASGGVGTFAVQI 163

Query: 209 LKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQI 268
            KA    V   CS    +LV SL  + VIDY   + +   AG   YDVI DA G     +
Sbjct: 164 AKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSL 223

Query: 269 NSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW 328
                 LK G   ++V++           G   GL+     L  +    G        R 
Sbjct: 224 YRASLALKPGG--RYVSV----------GGGPSGLLLVLLLLPLTLGGGGR-------RL 264

Query: 329 GFFMPIPYA--VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
            FF+  P A  ++++ + +E G++KPVIDS Y   + P A+ +++ G  RGK+++
Sbjct: 265 KFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  182 bits (463), Expect = 2e-54
 Identities = 99/363 (27%), Positives = 147/363 (40%), Gaps = 51/363 (14%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +  +GG + L+  + V  P     +VLV +KA  VNPIDV +  G            
Sbjct: 3   AVVVEEFGGPEVLKVVE-VPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAP--------- 52

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
                 PV   P   G +  G +VA G  VT   + D V  +    + G +++ ++  + 
Sbjct: 53  ------PVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPAD 106

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            +   P  +S EEAA +   GLTAW AL   A L       + VLV GA+GGVG+ A+QL
Sbjct: 107 WLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKP----GETVLVHGAAGGVGSAAIQL 162

Query: 209 LKAWDIEVV-TTCSGDAKDLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGIP 264
            KA    VV    S +  +L+  L  + VI+Y E    E +  + G    DV+LD  G  
Sbjct: 163 AKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGG- 221

Query: 265 LDQINSYLPFLKT-GKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT 323
            D   + L  L   G+      L        + L L+   +                   
Sbjct: 222 -DTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLT------------------ 262

Query: 324 NTIRWGFFMPIPYAV----KEINKFIERGQIKPVIDSKYNFCELPTAFEKV-QQGHLRGK 378
                      P A+     E+   +  G++KPVID  Y   E P A   +  +    GK
Sbjct: 263 -LRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGK 321

Query: 379 IIL 381
           ++L
Sbjct: 322 VVL 324

Length = 326

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  157 bits (399), Expect = 6e-45
 Identities = 101/363 (27%), Positives = 150/363 (41%), Gaps = 57/363 (15%)

Query: 32  ISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQLET 90
           + S+GG +  +  + V  P      VLV + A  VNP+D  +  GG              
Sbjct: 6   LESFGGPEVFELRE-VPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP--------- 55

Query: 91  CSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHK--QGSFSKLILADSA 148
                    P  LG D  G + A G  VT   + D VYG        QGS ++  + D+ 
Sbjct: 56  -------PLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDAR 108

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
           L+  KP+N+S  EAA +   G+TAW  L   AA+       + VL+ G +GGVG +AVQL
Sbjct: 109 LLALKPANLSMREAAALPLVGITAWEGLVDRAAVQA----GQTVLIHGGAGGVGHVAVQL 164

Query: 209 LKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGIP- 264
            KA    V  T S +      SL  + +I Y E           G G +DV+ D  G   
Sbjct: 165 AKAAGARVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRG-FDVVFDTVGGET 223

Query: 265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNA-----FDLLKSNFESGE 319
           LD       F     + + V++         +  L P   +NA     F LL      G 
Sbjct: 224 LDA-----SFEAVALYGRVVSILGG-----ATHDLAPLSFRNATYSGVFTLLPLLTGEGR 273

Query: 320 LCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSK-YNFCELPTAFEKVQQGHLRGK 378
                 +R            E  + +ERGQ++P++D + +   E   A  +++ G  RGK
Sbjct: 274 AHHGEILR------------EAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGK 321

Query: 379 IIL 381
           I++
Sbjct: 322 IVI 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  149 bits (379), Expect = 8e-42
 Identities = 103/362 (28%), Positives = 157/362 (43%), Gaps = 54/362 (14%)

Query: 47  VKTPI---LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL 103
           +K P+    K  +++V++ A ++NP+D+ +   Y                         L
Sbjct: 18  IKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVK---------------EKGL 62

Query: 104 GRDFCGKIVAKGPRV-TDLNIDDVVYGVIQPH---KQGSFSKLILADSALVHK----KPS 155
           GRD+ G IV  G  V ++  + D V G I PH    QG+ S+ +L D     K    KP 
Sbjct: 63  GRDYSGVIVKVGSNVASEWKVGDEVCG-IYPHPYGGQGTLSQYLLVDPKKDKKSITRKPE 121

Query: 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLK-AWDI 214
           NIS EEAA       TA+  L        + P D +VLVLG S  VG  A+QL K  ++I
Sbjct: 122 NISLEEAAAWPLVLGTAYQIL--EDLGQKLGP-DSKVLVLGGSTSVGRFAIQLAKNHYNI 178

Query: 215 -EVVTTCSGDAKDLVTSLNPNLVIDYNEP-------EAMHSIAGAGPYDVILDAAGIP-- 264
             VV TCS  + +L   L  +  IDY+           + ++ G G +D+ILD  G    
Sbjct: 179 GTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL 238

Query: 265 LDQINSYLPFLKTGKFSKFVTL--RSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
              INS L          +VT+          D+         NA  L  S         
Sbjct: 239 FPHINSILKPKSKN--GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGS-------LG 289

Query: 323 TNTIRWGFFMPIPYA--VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKII 380
             +  + FF+  P A  +++  + I  G++KP IDS Y F +   AFE+++    +GK++
Sbjct: 290 LWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVV 349

Query: 381 LN 382
           + 
Sbjct: 350 IK 351

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  144 bits (365), Expect = 4e-40
 Identities = 86/366 (23%), Positives = 138/366 (37%), Gaps = 57/366 (15%)

Query: 28  AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
           A      +G  D L+  D +  P     +VLV + A  VNP+D  +  G           
Sbjct: 3   AIR-YHEFGAPDVLRLGD-LPVPTPGPGEVLVRVHASGVNPVDTYIRAG----------- 49

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVY--GVIQPHKQGSFSKLILA 145
               +   +   P   G D  G + A G  V  L + D V+   +    +QG+ ++ ++ 
Sbjct: 50  ----AYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVV 105

Query: 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMA 205
            +  +   P  +S E+ A +    LTA+ AL    A G      + VLV G SG VG  A
Sbjct: 106 PADQLVPLPDGVSFEQGAALGIPALTAYRAL-FHRA-GAK--AGETVLVHGGSGAVGHAA 161

Query: 206 VQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAA 261
           VQL +     V+ T S     +LV     + V +Y      + + +       DVI++  
Sbjct: 162 VQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVL 221

Query: 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC 321
                 +   L  L  G   + V   S       ++ + P + K A              
Sbjct: 222 AN--VNLAKDLDVLAPG--GRIVVYGSG--GLRGTIPINPLMAKEA-------------- 261

Query: 322 KTNTIRWGFFMPIPY------AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHL 375
              +IR G  +          A + I   +  G ++PVI  +Y   E   A E V+ G  
Sbjct: 262 ---SIR-GVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGA 317

Query: 376 RGKIIL 381
            GK++L
Sbjct: 318 IGKVVL 323

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  142 bits (361), Expect = 2e-39
 Identities = 80/251 (31%), Positives = 112/251 (44%), Gaps = 33/251 (13%)

Query: 27  TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLR 86
            AA      GG   +    +V  P     +VLV++KAV++NP+D                
Sbjct: 2   KAAVLTGPGGGLLVVV---DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYG--------- 49

Query: 87  QLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-----PHKQGSFSK 141
                    +  +P  LG DF G +V  G  VT   + D V G +        + G+F +
Sbjct: 50  --------FIPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQE 101

Query: 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP------RDKRVLVL 195
            ++AD+ L  K P NIS EEAA +    +TA  AL     L L  P      + K VL+ 
Sbjct: 102 YVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIW 161

Query: 196 GASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GP 253
           G S  VGT+A+QL K    +V+TT S    DLV SL  + V DY++P+ +  I  A  G 
Sbjct: 162 GGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGK 221

Query: 254 YDVILDAAGIP 264
               LD    P
Sbjct: 222 LRYALDCISTP 232

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  134 bits (341), Expect = 1e-36
 Identities = 95/377 (25%), Positives = 146/377 (38%), Gaps = 81/377 (21%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGG-YGNVVLNSLRQ 87
           A      GG ++L   +    P    + V + ++A  VN  D+ M+ G Y          
Sbjct: 3   AVVCKELGGPEDLVLEEVPPEPGAPGE-VRIRVEAAGVNFPDLLMIQGKYQVKP------ 55

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                       P   G +  G + A G  VT   + D V  +     QG F++ ++  +
Sbjct: 56  ----------PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG---QGGFAEEVVVPA 102

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
           A V   P  +S EEAA +  T  TA+ AL   A L    P +  VLVLGA+GGVG  AVQ
Sbjct: 103 AAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQ---PGET-VLVLGAAGGVGLAAVQ 158

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGI 263
           L KA    V+   S + K  L  +L  + VIDY +P   E + ++ G    DV+ D  G 
Sbjct: 159 LAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVG- 217

Query: 264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD--LLKSNFESGE-- 319
                         G   +             SL  +      A+   LL   F SGE  
Sbjct: 218 --------------GDVFE------------ASLRSL------AWGGRLLVIGFASGEIP 245

Query: 320 -------LCKTNTI---RWGFFM-----PIPYAVKEINKFIERGQIKPVIDSKYNFCELP 364
                  L K  ++    WG +       +   + E+   +  G+I+P + + +   +  
Sbjct: 246 QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAA 305

Query: 365 TAFEKVQQGHLRGKIIL 381
            A   +      GK++L
Sbjct: 306 EALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  131 bits (332), Expect = 3e-35
 Identities = 93/357 (26%), Positives = 151/357 (42%), Gaps = 62/357 (17%)

Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
            +  P+   +D+LV ++AVSVNP+D  +  G                  PV   P  LG 
Sbjct: 22  ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGA----------------PVPGQPKILGW 65

Query: 106 DFCGKIVAKGPRVTDLNIDDVVY--GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAA 163
           D  G + A G  VT   + D VY  G I   + GS ++  L D  +V  KP ++S  EAA
Sbjct: 66  DASGVVEAVGSEVTLFKVGDEVYYAGDIT--RPGSNAEYQLVDERIVGHKPKSLSFAEAA 123

Query: 164 GVLYTGLTAWSAL----QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVT 218
            +  T LTAW AL     I+          K +L++G +GGVG++A+QL K    + V+ 
Sbjct: 124 ALPLTSLTAWEALFDRLGISEDAE---NEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIA 180

Query: 219 TCS-GDAKDLVTSLNPNLVIDYNEP--EAMHSIAGAGPYDVILDAAGIP--LDQINSYL- 272
           T S  ++   V  L  + VI++++   E + ++ G  P D I          D +   + 
Sbjct: 181 TASRPESIAWVKELGADHVINHHQDLAEQLEAL-GIEPVDYIFCLTDTDQHWDAMAELIA 239

Query: 273 PFLKTGKFSKFVTLRSPF----LKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW 328
           P    G     V  + P     LK+  S           F   +S F++ ++ + + I  
Sbjct: 240 PQ---GHICLIVDPQEPLDLGPLKSK-SASFH-----WEFMFTRSMFQTPDMIEQHEI-- 288

Query: 329 GFFMPIPYAVKEINKFIERGQIKPVIDSKY---NFCELPTAFEKVQQGHLRGKIILN 382
                    + E+   ++ G++K  +       N   L  A   ++ G   GKI+L 
Sbjct: 289 ---------LNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  130 bits (328), Expect = 1e-34
 Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 34/243 (13%)

Query: 28  AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
            AW +   G A +L   + ++ P   + +VLV++ A  +NP+D  ++   G         
Sbjct: 2   KAWVLPKPGAALQLTLEE-IEIPGPGAGEVLVKVHAAGLNPVDWKVIAW-GP-------- 51

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD-VVYGVIQPH----KQGSFSKL 142
                  P   +P   G D  G +VA G +VT   + D V Y     H    + GSF++ 
Sbjct: 52  -------PAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAY-----HASLARGGSFAEY 99

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
            + D+  V   P ++S EEAA +   GLTA+ AL     +       + +L+ G +GGVG
Sbjct: 100 TVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRI----EAGRTILITGGAGGVG 155

Query: 203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA-GPY--DVILD 259
           + AVQL K   + V+TTCS    + V SL  + VIDYN+ +    I    G    D +LD
Sbjct: 156 SFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLD 215

Query: 260 AAG 262
             G
Sbjct: 216 TVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  127 bits (322), Expect = 2e-34
 Identities = 71/246 (28%), Positives = 105/246 (42%), Gaps = 44/246 (17%)

Query: 56  DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKG 115
           +VLV ++A  +   D+ +  G                  P  + PL LG +  G +V  G
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGY---------------PPPPKLPLILGHEGAGVVVEVG 45

Query: 116 PRVTDLNI-DDVVY-------------------GVIQPHKQGSFSKLILADSALVHKKPS 155
           P VT + + D VV                    G++     G F++ ++  +  +   P 
Sbjct: 46  PGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPD 105

Query: 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE 215
            +S EEAA +     TA+ AL+       V      VLVLGA GGVG +A QL KA    
Sbjct: 106 GLSLEEAALLPEPLATAYHALRRAG----VLKPGDTVLVLGA-GGVGLLAAQLAKAAGAR 160

Query: 216 VVTTCSGDAK-DLVTSLNPNLVIDY--NEPEAMHSIAGAGPYDVILDAAGIPLDQINSYL 272
           V+ T   D K +L   L  + VIDY   + E    + G G  DV++DA G P + +   L
Sbjct: 161 VIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGP-ETLAQAL 219

Query: 273 PFLKTG 278
             L+ G
Sbjct: 220 RLLRPG 225

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  126 bits (318), Expect = 1e-33
 Identities = 86/343 (25%), Positives = 140/343 (40%), Gaps = 68/343 (19%)

Query: 56  DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKG 115
           +V VE+KA  +N  DV +  G                   +      LG +  G +   G
Sbjct: 2   EVEVEVKAAGLNFRDVLVALG------------------LLPGDETPLGLECSGIVTRVG 43

Query: 116 PRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSA 175
             VT L + D V G+      G+F+  +  D+ LV K P ++S EEAA +    LTA+ A
Sbjct: 44  SGVTGLKVGDRVMGLAP----GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYA 99

Query: 176 LQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSL--- 231
           L   A L     + + VL+  A+GGVG  A+QL +    EV  T   + K + +  L   
Sbjct: 100 LVDLARLQ----KGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGP 155

Query: 232 --------NPNLVIDYNEPEAMHSIAGAGPYDVILDA-AGIPLDQINSYLPFLKTGKFSK 282
                   + +          + +  G G  DV+L++ +G  L      L       F +
Sbjct: 156 VDHIFSSRDLSFA-----DGILRATGGRG-VDVVLNSLSGELLRASWRCL-----APFGR 204

Query: 283 FVTLRSPFLKNTDSLGLVPGLVKN----AFDLLKSNFESGELCKTNTIRWGFFMPIPYAV 338
           FV +    + +   LG+ P L +N    + DL +   E  EL +               +
Sbjct: 205 FVEIGKRDILSNSKLGMRPFL-RNVSFSSVDLDQLARERPELLRE-------------LL 250

Query: 339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           +E+ + +E G +KP+  +         AF  +Q G   GK++L
Sbjct: 251 REVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  126 bits (318), Expect = 3e-33
 Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 29/239 (12%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQ 87
           A  I   GG + L+  + V  P     +VL+ + A  VN  D+    G Y          
Sbjct: 3   AIVIKEPGGPEVLELGE-VPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP--------- 52

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                  P       LG +  G +VA GP VT   + D V  ++     G +++ ++  +
Sbjct: 53  -------PPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA---GGGYAEYVVVPA 102

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             +   P  +S  EAA +     TAW  L     L       + VL+ G + GVGT A+Q
Sbjct: 103 GQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLK----AGETVLIHGGASGVGTAAIQ 158

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAG 262
           L KA    V+ T   + K +   +L  ++ I+Y      E +    G    DVILD  G
Sbjct: 159 LAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVG 217

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  125 bits (315), Expect = 9e-33
 Identities = 99/382 (25%), Positives = 154/382 (40%), Gaps = 77/382 (20%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQ 87
           A  ++ +GG D+L+       P   S +V V ++A  +N  D+ A  G Y +        
Sbjct: 2   AVVLTGFGGLDKLKVEKEAL-PEPSSGEVRVRVEACGLNFADLMARQGLYDSAP------ 54

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                     + P   G +  G + A G  V D  + D V G+    + G +++++   +
Sbjct: 55  ----------KPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT---RFGGYAEVVNVPA 101

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             V   P  +S EEAA      LTA+ AL     LG + P  + VLV  A+GGVG  A Q
Sbjct: 102 DQVFPLPDGMSFEEAAAFPVNYLTAYYAL---FELGNLRP-GQSVLVHSAAGGVGLAAGQ 157

Query: 208 LLKA-WDIEVVTTCSGDAKDLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGI 263
           L K   ++ VV T S    + +       VIDY      E +  I+  G  D++LDA G 
Sbjct: 158 LCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEG-VDIVLDALGG 216

Query: 264 PLDQINSYLPFLK-TGK-----FSKFVTLRSP-FLK------NTDSLGLVPGLVKNAFDL 310
              + +  L  LK  G+      +  VT     + K      N   +        +   L
Sbjct: 217 EDTRKSYDL--LKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKV--------DPMKL 266

Query: 311 LKSN-----------FESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYN 359
           +  N           FE  EL     +           + ++ K  E G+IKP IDS + 
Sbjct: 267 ISENKSVLGFNLGWLFEEREL-----LTE--------VMDKLLKLYEEGKIKPKIDSVFP 313

Query: 360 FCELPTAFEKVQQGHLRGKIIL 381
           F E+  A  ++Q     GK++L
Sbjct: 314 FEEVGEAMRRLQSRKNIGKVVL 335

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  122 bits (309), Expect = 7e-32
 Identities = 97/395 (24%), Positives = 149/395 (37%), Gaps = 97/395 (24%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQ 87
           A  I  +GG + L++ D +  P     +VLV +KA ++N +D+    G  G         
Sbjct: 3   AVVIRGHGGPEVLEYGD-LPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG--------- 52

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV-------------------- 127
                    L  P  LG D  G + A GP VT++     V                    
Sbjct: 53  -------IKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGREN 105

Query: 128 ----YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183
               YG++  H  G +++ +   +  +   P N+S EEAA    T LTAW  L +T A  
Sbjct: 106 LCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHML-VTRAR- 163

Query: 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE- 241
            + P +  VLV GA  GVG+ A+Q+ K +   V+ T   + K +    L  + VIDY + 
Sbjct: 164 -LRPGE-TVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKE 221

Query: 242 --PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT------------LR 287
                +  + G    DV+++  G         L  L  G   + VT            LR
Sbjct: 222 DFVREVRELTGKRGVDVVVEHVG--AATWEKSLKSLARG--GRLVTCGATTGYEAPIDLR 277

Query: 288 SPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER 347
             F +    LG   G      + L                               + + R
Sbjct: 278 HVFWRQLSILGSTMGTKAELDEAL-------------------------------RLVFR 306

Query: 348 GQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
           G++KPVIDS +   E   A  +++     GKI+L 
Sbjct: 307 GKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT 341

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  122 bits (309), Expect = 7e-32
 Identities = 107/386 (27%), Positives = 157/386 (40%), Gaps = 91/386 (23%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQ 87
           AW++S  GG D L+  +    P     +VLV + AVS+N  D+ +L G Y          
Sbjct: 3   AWRLSGGGGLDNLKLVE-EPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP--------- 52

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP-HKQGSFSK----- 141
                  P ++ PL    D  G++VA G  VT   + D V     P    G  +      
Sbjct: 53  -------PPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEAS 105

Query: 142 -------------LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPR 188
                        ++L +  LV   P ++S EEAA +   GLTAW+AL     LG + P 
Sbjct: 106 ALGGPIDGVLAEYVVLPEEGLVR-APDHLSFEEAATLPCAGLTAWNAL---FGLGPLKPG 161

Query: 189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE-P---- 242
           D  VLV G +GGV   A+Q  KA    V+ T S D K +   +L  + VI+Y   P    
Sbjct: 162 DT-VLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGE 219

Query: 243 EAMHSIAGAGPYDVILDAAGIP-LDQ-INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLV 300
           E +    G G  D +++  G   L Q I +    +  G     +   S F      + L+
Sbjct: 220 EVLKLTGGRG-VDHVVEVGGPGTLAQSIKA----VAPGGVISLIGFLSGF---EAPVLLL 271

Query: 301 PGLVKNAFDLLKSNFESGELCKTNTI-------RWGFFMPIPYAVKEINKFIERGQIKPV 353
           P L K A                 T+       R  F        + +N+ IE  +I+PV
Sbjct: 272 PLLTKGA-----------------TLRGIAVGSRAQF--------EAMNRAIEAHRIRPV 306

Query: 354 IDSKYNFCELPTAFEKVQQGHLRGKI 379
           ID  + F E   A+  ++ G   GK+
Sbjct: 307 IDRVFPFEEAKEAYRYLESGSHFGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  119 bits (301), Expect = 7e-31
 Identities = 72/238 (30%), Positives = 103/238 (43%), Gaps = 33/238 (13%)

Query: 31  QISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGG-YGNVVLNSLRQLE 89
           +I   GG + L++ D V  P     +VLV   A+ VN ID     G Y            
Sbjct: 4   RIHKTGGPEVLEYED-VPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLY------------ 50

Query: 90  TCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD-VVYGVIQPHKQGSFSKLILADSA 148
                  L  P  LG +  G + A GP VT   + D V Y        G++++  +  ++
Sbjct: 51  ------PLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGPP----GAYAEYRVVPAS 100

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            + K P  ISDE AA +L  GLTA   L+ T  +         VLV  A+GGVG +  Q 
Sbjct: 101 RLVKLPDGISDETAAALLLQGLTAHYLLRETYPVK----PGDTVLVHAAAGGVGLLLTQW 156

Query: 209 LKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE---PEAMHSIAGAGPYDVILDAAG 262
            KA    V+ T S + K +L  +   + VI+Y +    E +  I G    DV+ D  G
Sbjct: 157 AKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  118 bits (298), Expect = 9e-31
 Identities = 83/344 (24%), Positives = 133/344 (38%), Gaps = 78/344 (22%)

Query: 59  VEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRV 118
           +E++A  +N  DV          L +L                 LG +  G +   GP V
Sbjct: 1   IEVRAAGLNFRDV----------LIALGLYP---------GEAVLGGECAGVVTRVGPGV 41

Query: 119 TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI 178
           T L + D V G+      G+F+  ++ D+ LV   P   S EEAA V    LTA+ AL  
Sbjct: 42  TGLAVGDRVMGLAP----GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVD 97

Query: 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVI 237
            A L       + VL+  A+GGVG  A+QL +    EV  T     K D + +L     I
Sbjct: 98  LARLR----PGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRALG----I 149

Query: 238 D----YN------EPEAMHSIAGAGPYDVILDA-AGIPLDQINSYLPFLKTG-----KFS 281
                ++        E + +  G G  DV+L++ +G           FL           
Sbjct: 150 PDDHIFSSRDLSFADEILRATGGRG-VDVVLNSLSG----------EFLDASLRCLAPGG 198

Query: 282 KFVTLRSPFLKNTDSLGLVPGLVKN----AFDLLKSNFESGELCKTNTIRWGFFMPIPYA 337
           +FV +    +++   L + P    N    A DL     E  +  +               
Sbjct: 199 RFVEIGKRDIRDNSQLAMAP-FRPNVSYHAVDLDAL-EEGPDRIRE-------------L 243

Query: 338 VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           + E+ +    G ++P+  + +   +   AF  +QQG   GK++L
Sbjct: 244 LAEVLELFAEGVLRPLPVTVFPISDAEDAFRYMQQGKHIGKVVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  111 bits (280), Expect = 7e-28
 Identities = 91/382 (23%), Positives = 153/382 (40%), Gaps = 79/382 (20%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQ 87
           A  +  +G   E++    V  P     +VL++++A  V   D+ +  G +    L     
Sbjct: 6   AAVLKKFGQPLEIE---EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKL----- 57

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV----------------- 130
                       PL  G +  G +V  G  VT L + D V GV                 
Sbjct: 58  ------------PLIPGHEIVGTVVEVGEGVTGLKVGDRV-GVGWLVISCGECEYCRSGN 104

Query: 131 --IQPHK-------QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA 181
             + P++        G +++ ++  +  V K P  +   EAA +L  G+T + AL+    
Sbjct: 105 ENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKAN- 163

Query: 182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT-TCSGDAKDLVTSLNPNLVIDYN 240
              V P  K V V+GA GG+G MAVQ  KA   EV+  T S +  +L   L  + VI+ +
Sbjct: 164 ---VKP-GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS 218

Query: 241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLV 300
           + +A+ ++      D I+D  G     +   L  L+ G     V +  P       L   
Sbjct: 219 DSDALEAVKEI--ADAIIDTVGPAT--LEPSLKALRRG--GTLVLVGLPGGGPIPLL--- 269

Query: 301 PGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNF 360
                 AF L+       E+    +I            +E   F   G+IKP I      
Sbjct: 270 -----PAFLLI-----LKEI----SIVGSLVGTRADL-EEALDFAAEGKIKPEILETIPL 314

Query: 361 CELPTAFEKVQQGHLRGKIILN 382
            E+  A+E++++G +RG+ +++
Sbjct: 315 DEINEAYERMEKGKVRGRAVID 336

Length = 339

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  110 bits (278), Expect = 1e-27
 Identities = 86/368 (23%), Positives = 142/368 (38%), Gaps = 59/368 (16%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQ 87
           A +   +GG + L+  + +  P   + +VL+ ++A+ +N  D     G Y          
Sbjct: 3   AVRFHQFGGPEVLRIEE-LPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI--------- 52

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP--HKQGSFSKLILA 145
                       P  LG +  G + A G  VT   + D V  +      + G++++  L 
Sbjct: 53  -------EPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALV 105

Query: 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMA 205
            +A V K P  +S  EAA +    LTA+ AL     L  + P D  VL+  AS  VG  A
Sbjct: 106 PAAAVVKLPDGLSFVEAAALWMQYLTAYGAL---VELAGLRPGD-SVLITAASSSVGLAA 161

Query: 206 VQLLKAWD-IEVVTTCSGDAKDLVTSLNPNLVIDYNE---PEAMHSIAGAGPYDVILDAA 261
           +Q+  A     + TT + + +D + +L    VI  +E      +  I G    DV+ D  
Sbjct: 162 IQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPV 221

Query: 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF-ESGEL 320
           G P               F+K     +P             +V  A     + F     L
Sbjct: 222 GGPQ--------------FAKLADALAPGGT---------LVVYGALSGEPTPFPLKAAL 258

Query: 321 CKTNTIR----WGFFMP---IPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQG 373
            K+ T R        +       A+  I   +  G +KPV+D  + F ++  A   ++ G
Sbjct: 259 KKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESG 318

Query: 374 HLRGKIIL 381
              GKI++
Sbjct: 319 QQIGKIVV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  106 bits (268), Expect = 4e-26
 Identities = 97/391 (24%), Positives = 153/391 (39%), Gaps = 79/391 (20%)

Query: 28  AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVV---LN 83
            A  ++ +GG D+L + D+V  P     +VL+ + A  VN  D+    G Y   V    +
Sbjct: 2   RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATD 61

Query: 84  SLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP---------- 133
           S    E       L FP   G D  G++VA G  V    I + V  ++ P          
Sbjct: 62  STGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERV--LVDPSIRDPPEDDP 119

Query: 134 --------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185
                    + G F++  +  +   +   S +SD E A    +  TA + L+  A +G  
Sbjct: 120 ADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLE-RAGVG-- 176

Query: 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEP-EA 244
               + VLV GASGGVG+  VQL K     V+       ++ V +L  + VI  + P  A
Sbjct: 177 --AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLA 234

Query: 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT------------LRSPFLK 292
                G  P DV+ D  G PL      L  L+ G   ++VT            LR+ +LK
Sbjct: 235 DAKALGGEPVDVVADVVGGPL--FPDLLRLLRPG--GRYVTAGAIAGPVVELDLRTLYLK 290

Query: 293 NTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP 352
           +    G   G                       +R+                IE G+I+P
Sbjct: 291 DLTLFGSTLG-------------TREVF--RRLVRY----------------IEEGEIRP 319

Query: 353 VIDSKYNFCELPTAFEK-VQQGHLRGKIILN 382
           V+   +   E+  A  + +++ H+ GK++L 
Sbjct: 320 VVAKTFPLSEIREAQAEFLEKRHV-GKLVLV 349

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score =  101 bits (254), Expect = 3e-24
 Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 29/201 (14%)

Query: 50  PILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG 109
           P    +D+LVE+KA+SVNP+D              +R      + P    P  LG D  G
Sbjct: 25  PKPGGRDLLVEVKAISVNPVDT------------KVRA----RMAPEAGQPKILGWDAAG 68

Query: 110 KIVAKGPRVTDLNIDDVVY--GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLY 167
            +VA G  VT     D V+  G I   + GS ++  L D  +V  KP ++S  EAA +  
Sbjct: 69  VVVAVGDEVTLFKPGDEVWYAGDID--RPGSNAEFHLVDERIVGHKPKSLSFAEAAALPL 126

Query: 168 TGLTAWSA----LQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCS- 221
           T +TAW      L I      V    + +L++G +GGVG++ +QL +    + V+ T S 
Sbjct: 127 TSITAWELLFDRLGINDP---VAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASR 183

Query: 222 GDAKDLVTSLNPNLVIDYNEP 242
            ++++ V  L  + VID+++P
Sbjct: 184 PESQEWVLELGAHHVIDHSKP 204

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 98.6 bits (246), Expect = 3e-23
 Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 26/239 (10%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A ++  +G  + L   D V  P+     V + + A  V+ +D  +  G+G          
Sbjct: 3   AIRLHEFGPPEVLVPED-VPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWG---------- 51

Query: 89  ETCSVEPVL-EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                 P   E P   G +  G + A GP V    +   V         G +++L +AD 
Sbjct: 52  ----PGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHT-GRAGGGYAELAVADV 106

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             +H  P  +  E A  V++ G TA   L +      + P D  VLV  A+GG+G++ VQ
Sbjct: 107 DSLHPVPDGLDLEAAVAVVHDGRTALGLLDLAT----LTPGD-VVLVTAAAGGLGSLLVQ 161

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAG 262
           L KA    VV    G AK  LV +L  ++ +DY  P   + +    G G   V+LD  G
Sbjct: 162 LAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVG 220

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 96.6 bits (241), Expect = 2e-22
 Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 27/238 (11%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A +I+  GG + L   + V  P+ K+ +VL+ + A  VN  D+    G            
Sbjct: 3   AIEITEPGGPEVLVLVE-VPLPVPKAGEVLIRVAAAGVNRPDLLQRAG------------ 49

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
                 P       LG +  G++VA G  V+   + D V  ++     G +++ +   + 
Sbjct: 50  ---KYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA---GGGYAEYVAVPAG 103

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            V   P  +S  EAA +  T  T WS L     L       + VL+ G + G+GT A+QL
Sbjct: 104 QVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLK----AGETVLIHGGASGIGTTAIQL 159

Query: 209 LKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE---PEAMHSIAGAGPYDVILDAAG 262
            KA+   V TT   D K     +L  ++ I+Y E    E + +  G    DVILD  G
Sbjct: 160 AKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVG 217

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 95.4 bits (238), Expect = 5e-22
 Identities = 81/358 (22%), Positives = 131/358 (36%), Gaps = 41/358 (11%)

Query: 32  ISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETC 91
           ++  GG + L+       P   + +V+V+++A  V+  DV M  G               
Sbjct: 6   VTRRGGPEVLKV-VEADLPEPAAGEVVVKVEASGVSFADVQMRRG-------------LY 51

Query: 92  SVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVH 151
             +P    P T G D  G++ A G  VT   + D V  +    + G  ++ I  D+  + 
Sbjct: 52  PDQP--PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT---RVGGNAEYINLDAKYLV 106

Query: 152 KKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA 211
             P  +   EA  ++   +TA+  L   A    V    +RVL+ GASGGVG   ++L   
Sbjct: 107 PVPEGVDAAEAVCLVLNYVTAYQMLHRAA---KV-LTGQRVLIHGASGGVGQALLELALL 162

Query: 212 WDIEVVTTCSGDAKDLVTSLN--PNLVIDYNE---PEAMHSIAGAGPYDVILDAAGIPLD 266
              EV  T S      +  L   P   IDY       AM +  G    DV+ D  G+  +
Sbjct: 163 AGAEVYGTASERNHAALRELGATP---IDYRTKDWLPAMLTPGGV---DVVFD--GVGGE 214

Query: 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTI 326
                   L  G     V              L       A         +G       +
Sbjct: 215 SYEESYAALAPG--GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYV 272

Query: 327 RWGFFM-PIPYA--VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
                  P  +   + E+   + +G+I+P I  +    E+  A   ++ G + GKI+L
Sbjct: 273 WRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 86.6 bits (215), Expect = 5e-19
 Identities = 93/370 (25%), Positives = 139/370 (37%), Gaps = 85/370 (22%)

Query: 45  DNVKTPILKSKDVLVEMKAVSVNPID-VAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL 103
           + V  P     +VL+++KA  V   D +   G +                      PL L
Sbjct: 16  EEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKY-----------------PLIL 58

Query: 104 GRDFCGKIVAKGPRVTDLNIDDVV---------------------------YGVIQPHKQ 136
           G +  G +   G  V      D V                           YG       
Sbjct: 59  GHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVD--- 115

Query: 137 GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG 196
           G F++ +      + K P N+SDE AA       TA  AL+  A +         VLV G
Sbjct: 116 GGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKK----GDTVLVTG 170

Query: 197 ASGGVGTMAVQLLKAWDIEVVT-TCSGDAKDLVTSLNPNLVIDYNEP-EAMHSIAGAGPY 254
           A GGVG  A+QL KA    V+  T S +   ++  L  + VID ++  E +  + GA   
Sbjct: 171 AGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGA--- 227

Query: 255 DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTD--SLGLVPGLVKNAFDLLK 312
           DV+++  G P   I   L  L  G   + V      + N       L PGL+     +LK
Sbjct: 228 DVVIELVGSP--TIEESLRSLNKG--GRLV-----LIGNVTPDPAPLRPGLL-----ILK 273

Query: 313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQ 372
                G +  T              V+E  K ++ G+IKPVID   +  ++  A E ++ 
Sbjct: 274 EIRIIGSISAT-----------KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKS 322

Query: 373 GHLRGKIILN 382
           G + G+I+L 
Sbjct: 323 GKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 84.4 bits (209), Expect = 2e-18
 Identities = 77/290 (26%), Positives = 124/290 (42%), Gaps = 28/290 (9%)

Query: 98  EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNI 157
            +P T G +  G + A GP VT L + D V         G  + L+      V +KP+++
Sbjct: 36  PYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE-SMGGHATLVTVPEDQVVRKPASL 94

Query: 158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVV 217
           S EEA  +    LT   A    A  GL   + + +L+  A+GG G MAVQL +    E+ 
Sbjct: 95  SFEEACALPVVFLTVIDAF---ARAGL--AKGEHILIQTATGGTGLMAVQLARLKGAEIY 149

Query: 218 TTCSGDAK-DLVTSLNPNLVIDYNE----PEAMHSIAGAGPYDVILDAAGIPLDQ-INSY 271
            T S D K + +  L    VI+Y E     E M    G G   VI   +G  + + +N  
Sbjct: 150 ATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCL 209

Query: 272 LPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF 331
            P        ++V +    LK+  S+ L   L  N       +F S +L K   +   F 
Sbjct: 210 AP------GGRYVEIAMTALKSAPSVDL-SVLSNN------QSFHSVDLRKLLLLDPEF- 255

Query: 332 MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
             I     E+   +E G+++P +   + F ++  A+  +      GK+++
Sbjct: 256 --IADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 84.9 bits (211), Expect = 2e-18
 Identities = 93/393 (23%), Positives = 152/393 (38%), Gaps = 96/393 (24%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +  +G         +V  P     +VLV+++A  V   D+    G   V        
Sbjct: 3   AAVVEEFGEK--PYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPK----- 55

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------- 132
                      PL  G +  G +VA GP V+ L + D V GV                  
Sbjct: 56  ----------LPLIGGHEGAGVVVAVGPGVSGLKVGDRV-GVKWLYDACGKCEYCRTGDE 104

Query: 133 ---PHKQ-------GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL 182
              P+++       G+F++  +AD+  V   P  +S E+AA +L  G+T + AL+     
Sbjct: 105 TLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAG-- 162

Query: 183 GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE 241
             + P D  V++ GA GG+G + VQ  KA  + V+    GD K +L   L  +  +D+ +
Sbjct: 163 --LKPGD-WVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKK 219

Query: 242 ---PEAMHSIA-GAGPYDVILDAAGI-PLDQINSYLPFLKT--------GKFSKFVTLRS 288
               EA+  +  G G + V++ A      +Q   YL    T        G F        
Sbjct: 220 SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPL----D 275

Query: 289 PFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG 348
           PF      + +V  LV    DL                            +E  +F  RG
Sbjct: 276 PFDLVLRGITIVGSLVGTRQDL----------------------------QEALEFAARG 307

Query: 349 QIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           ++KP I       +L   FEK+++G + G++++
Sbjct: 308 KVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVV 339

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 79/369 (21%), Positives = 134/369 (36%), Gaps = 66/369 (17%)

Query: 31  QISSYGGADELQF-NDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQL 88
             + +G    L     ++  P     +VLV M A  +NP D+  + G YG          
Sbjct: 2   VYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYG---------- 51

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
                 P L  P   G +  G +V  G  V+ L +   V   +    +G++ + ++A + 
Sbjct: 52  ----SRPPL--PAVPGNEGVGVVVEVGSGVSGLLVGQRV---LPLGGEGTWQEYVVAPAD 102

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            +   P +ISDE+AA +    LTAW  L     L    P    V+   A+  VG M +QL
Sbjct: 103 DLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKL----PPGDWVIQNAANSAVGRMLIQL 158

Query: 209 LKAWDIEVV-TTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIA---GAGPYDVILDAAG-- 262
            K    + +      +  + + +L  + VID +  +    +    G     + LDA G  
Sbjct: 159 AKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE 218

Query: 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK 322
                  S    L+ G     V           + GL+ G        +          K
Sbjct: 219 SATRLARS----LRPG--GTLV-----------NYGLLSGEPVPFPRSVFIF-------K 254

Query: 323 TNTIRWGFFM----------PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQ 372
             T+R GF++                 E+ K +E G +   + +K+   +   A    +Q
Sbjct: 255 DITVR-GFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQ 313

Query: 373 GHLRGKIIL 381
               GK++L
Sbjct: 314 PGRGGKVLL 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 68/262 (25%), Positives = 103/262 (39%), Gaps = 59/262 (22%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQ 87
           A  + + GG  E +    V  P     +VL++++A  V   D+ A  G +G         
Sbjct: 2   AAVVHAAGGPLEPE---EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKY----- 53

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV--IQP------------ 133
                       PL  G +  G++V  G  V    + D V GV  +              
Sbjct: 54  ------------PLVPGHEIVGEVVEVGAGVEGRKVGDRV-GVGWLVGSCGRCEYCRRGL 100

Query: 134 ------------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA 181
                         QG +++ ++AD+      P  +   +AA +L  G+T +SAL+    
Sbjct: 101 ENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAG- 159

Query: 182 LGLVYPRD-KRVLVLGASGGVGTMAVQLLKAWDIEVVT-TCSGDAKDLVTSLNPNLVIDY 239
                PR  +RV VLG  GG+G +AVQ  +A   E V  T S D ++L   L  + V+D 
Sbjct: 160 -----PRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDS 213

Query: 240 NEPEAMHSIAGAGPYDVILDAA 261
                    A AG  DVIL   
Sbjct: 214 GAELDEQ--AAAGGADVILVTV 233

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 79.1 bits (196), Expect = 2e-16
 Identities = 73/315 (23%), Positives = 114/315 (36%), Gaps = 73/315 (23%)

Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVV------------------------------Y 128
           +PL  G +  G +VA G +VT   + D V                               
Sbjct: 53  YPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN 112

Query: 129 GVIQPHK--QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQ---ITAALG 183
           G        QG ++  I+ D   V K P  +    AA +L  G+T +S L+   +     
Sbjct: 113 GKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPG-- 170

Query: 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP 242
                 KRV V+G  GG+G +AV+  KA   EV       +K +    L  +  I   +P
Sbjct: 171 ------KRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDP 223

Query: 243 EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG 302
           EAM     AG  D+I+D      D ++ YL  LK G     V            +G    
Sbjct: 224 EAM--KKAAGSLDLIIDTVSASHD-LDPYLSLLKPG--GTLV-----------LVGAPEE 267

Query: 303 -LVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFC 361
            L    F L+             ++  G  +      +E+  F     IKP ++      
Sbjct: 268 PLPVPPFPLIFGRK---------SV-AGSLIGGRKETQEMLDFAAEHGIKPWVE-VIPMD 316

Query: 362 ELPTAFEKVQQGHLR 376
            +  A E++++G +R
Sbjct: 317 GINEALERLEKGDVR 331

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 84/393 (21%), Positives = 157/393 (39%), Gaps = 83/393 (21%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +   G   E      + TP     +VLV++ A  V   D+ +  G  +  L   + +
Sbjct: 3   AAAVVEPGKPLEEV---EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYD--LGGGKTM 57

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD--VVY------------------ 128
                +  ++ PL LG +  G++VA GP   D+ + D  +VY                  
Sbjct: 58  SL--DDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENL 115

Query: 129 -------GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA 181
                  G+ Q    G +++ ++   +     P  +    AA +  +GLTA+SA++    
Sbjct: 116 CAKGRALGIFQD---GGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMP 172

Query: 182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKAW--------DIEVVTTCSGDAK-DLVTSLN 232
           L      D+ V+++GA GG+G MA+ LLKA         DI+       +AK +   +  
Sbjct: 173 L----VADEPVVIIGA-GGLGLMALALLKALGPANIIVVDID-------EAKLEAAKAAG 220

Query: 233 PNLVIDYNEPEAMHSI--AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF 290
            ++V++ ++P+A   I  A  G  D ++D                 T   +  +      
Sbjct: 221 ADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNS-----------ATASLAFDI------ 263

Query: 291 LKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI 350
           L     L LV GL      L         L    TI+ G ++     ++E+    + G++
Sbjct: 264 LAKGGKLVLV-GLFGGEATLPLPLLPLRAL----TIQ-GSYVGSLEELRELVALAKAGKL 317

Query: 351 KPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA 383
           KP+  ++    ++  A + ++ G + G+ +L  
Sbjct: 318 KPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 75.5 bits (186), Expect = 3e-15
 Identities = 85/358 (23%), Positives = 139/358 (38%), Gaps = 50/358 (13%)

Query: 35  YGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVE 94
           +GG D L+  ++ K P  K  DVL+++ A  VN  D     G         +        
Sbjct: 10  FGGVDVLKIGESPK-PAPKRNDVLIKVSAAGVNRADTLQRQG---------KYPPPPGSS 59

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKP 154
            +L      G +  G +   G  V      D V  ++     G +++  +A    V   P
Sbjct: 60  EIL------GLEVAGYVEDVGSDVKRFKEGDRVMALL---PGGGYAEYAVAHKGHVMHIP 110

Query: 155 SNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-D 213
              + EEAA +    LTAW  L+     G V      VL+   + GVGT A QL + +  
Sbjct: 111 QGYTFEEAAAIPEAFLTAWQLLK---KHGDVKKGQ-SVLIHAGASGVGTAAAQLAEKYGA 166

Query: 214 IEVVTTCSGDAKDLVTSLNPNLVIDY----NEPEAMHSIAGAGPYDVILDAAGIPLDQIN 269
             ++TT S +  D    L   ++I Y         +  + G    +++LD  G       
Sbjct: 167 ATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVG------G 220

Query: 270 SYLP-----FLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTN 324
           SYL          GK+  +  +    ++  + L L+       F  L+S   S E  K +
Sbjct: 221 SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRS--RSDEY-KAD 277

Query: 325 TIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
            +       +PY        +E G+IKP++D  Y   E+  A   ++Q    GK++L 
Sbjct: 278 LVASFEREVLPY--------MEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLT 327

Length = 334

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 71/251 (28%), Positives = 106/251 (42%), Gaps = 53/251 (21%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPV 96
           G + L+  D VK P     +VL+ +K   VNP+D  ++                  V+P+
Sbjct: 10  GIENLKVED-VKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK--------------VKPM 54

Query: 97  LEFPLTLGRDFCGKIVAKGPRVTDLNIDD--VVY----------------------GVIQ 132
              P   G +F G +   G  V  +   D  VVY                      G+I 
Sbjct: 55  PHIP---GAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIG 111

Query: 133 PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRV 192
               G +++ I+     + K P +ISDE AA +    LTA+ AL+ TA LG      + V
Sbjct: 112 VVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TAGLG----PGETV 166

Query: 193 LVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE-PEAMHSIAGA 251
           +V GASG  G  AVQL K    EV+       KD +     + V+DY+E  E +  I   
Sbjct: 167 VVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEVEEKVKEITKM 223

Query: 252 GPYDVILDAAG 262
              DV++++ G
Sbjct: 224 --ADVVINSLG 232

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 71.1 bits (175), Expect = 9e-14
 Identities = 81/384 (21%), Positives = 140/384 (36%), Gaps = 87/384 (22%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPV 96
           G  +L++ D +  P     +VLV++KA  +   D+    G G                  
Sbjct: 8   GPGDLRYED-IPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-----------------A 49

Query: 97  LEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV------------------------YGVIQ 132
              PL LG +F G +   G  V DL + D V                        Y  I 
Sbjct: 50  YHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIG 109

Query: 133 PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRV 192
             + G+F++ +   +  + K P ++  EEAA      +   +A+ + A           V
Sbjct: 110 SRRDGAFAEYVSVPARNLIKIPDHVDYEEAA------MIEPAAVALHAVRLAGITLGDTV 163

Query: 193 LVLGASGGVGTMAVQLLKAWDIE-VVTTCSGDAK-DLVTSLNPNLVID--YNEPEAMHSI 248
           +V+GA G +G +A+Q LK    + V+     D K  +   L  +  I+    + E +  +
Sbjct: 164 VVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVREL 222

Query: 249 AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF 308
                 D++++AAG P     +           K V +               G+     
Sbjct: 223 TEGRGADLVIEAAGSPATIEQA---LALARPGGKVVLV---------------GIPYGDV 264

Query: 309 DLLKSNFES---GELCKTNTIRWGFFMPI--PYAVKEINK---FIERGQI--KPVIDSKY 358
            L +  FE     EL    TI+ G +     P+   E       +  G+I  +P+I  + 
Sbjct: 265 TLSEEAFEKILRKEL----TIQ-GSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRL 319

Query: 359 NFCELPTAFEKVQQG-HLRGKIIL 381
              + P AFE++       GK++L
Sbjct: 320 PLEDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 2e-13
 Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 69/319 (21%)

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-----------------PHK-- 135
           P +++P+ LG +  G +   G  V      D V  ++                   ++  
Sbjct: 50  PRMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLG 109

Query: 136 -----QGSFSKLILAD-SALVHKKPSNISDEEA------AGVLYTGLTAWSALQITAALG 183
                 G F++      ++LV K P N+SDE A       G++Y GL      +     G
Sbjct: 110 YGEELDGFFAEYAKVKVTSLV-KVPPNVSDEGAVIVPCVTGMVYRGLR-----RAGVKKG 163

Query: 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE-P 242
                 + VLV GA GGVG  A+Q+ KA   +V+   S ++K  + S   + VI  ++  
Sbjct: 164 ------ETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFS 217

Query: 243 EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG 302
           E +  I GA   D++++  G P   +   L  L  G   K + + +     T SL L  G
Sbjct: 218 EEVKKIGGA---DIVIETVGTP--TLEESLRSLNMG--GKIIQIGNVDPSPTYSLRL--G 268

Query: 303 LVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCE 362
            +     +LK     G +  T              V+E  K +  G+IKPVI ++ +  E
Sbjct: 269 YI-----ILKDIEIIGHISATK-----------RDVEEALKLVAEGKIKPVIGAEVSLSE 312

Query: 363 LPTAFEKVQQGHLRGKIIL 381
           +  A E+++     GKI++
Sbjct: 313 IDKALEELKDKSRIGKILV 331

Length = 334

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 69.2 bits (170), Expect = 4e-13
 Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 28/195 (14%)

Query: 47  VKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
           V  P+    +VLV+ + V +N  D+    G Y               V+P    P   G 
Sbjct: 23  VPVPLPGPGEVLVKNRFVGINASDINFTAGRYDP------------GVKP----PFDCGF 66

Query: 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGV 165
           +  G++VA G  VTD  + D V   +     G+F++  +  +      P      E   +
Sbjct: 67  EGVGEVVAVGEGVTDFKVGDAV-ATMSF---GAFAEYQVVPARHAVPVPE--LKPEVLPL 120

Query: 166 LYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK 225
           L +GLTA  AL+    +       + VLV  A+GG G  AVQL K     V+ TCS D K
Sbjct: 121 LVSGLTASIALEEVGEMK----SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEK 176

Query: 226 -DLVTSLNPNLVIDY 239
            + + SL  +  I+Y
Sbjct: 177 AEFLKSLGCDRPINY 191

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 69.2 bits (170), Expect = 5e-13
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 27/223 (12%)

Query: 27  TAAWQISSYGGADE-LQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNS 84
             A   + +G   E LQ       P     +VLV+M A  +NP D+  + G Y       
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYP-----I 55

Query: 85  LRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLIL 144
                        E P   G +  G++V  G  V  L   D V  +      G++    +
Sbjct: 56  KPPTTP-------EPPAVGGNEGVGEVVKVGSGVKSLKPGDWV--IPLRPGLGTWRTHAV 106

Query: 145 ADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL-GASGGVGT 203
             +  + K P+++  E+AA +     TA+   ++      + P D   ++  GA+  VG 
Sbjct: 107 VPADDLIKVPNDVDPEQAATLSVNPCTAY---RLLEDFVKLQPGD--WVIQNGANSAVGQ 161

Query: 204 MAVQLLKAWDIEVVTTC-----SGDAKDLVTSLNPNLVIDYNE 241
             +QL K   I+ +          + K+ + +L  + V+   E
Sbjct: 162 AVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEE 204

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 64.3 bits (157), Expect = 9e-13
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 32/151 (21%)

Query: 236 VIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTD 295
           VIDY   +   + AG G  DV+LD  G     + + L     G+                
Sbjct: 6   VIDYTTEDFEEATAGEG-VDVVLDTVGGE-TLLRALLALKPGGRLV-------------- 49

Query: 296 SLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAV-----KEINKFIERGQI 350
           S+G    L+  A                   R  F  P+          E+ + +E G++
Sbjct: 50  SIGGPDLLLSVAAKAGGRGV-----------RGVFLFPVSPGEAGADLAELAELVEAGKL 98

Query: 351 KPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           +PVID  +   E   A   ++ G  RGK++L
Sbjct: 99  RPVIDRVFPLEEAAEAHRYLESGRARGKVVL 129

Length = 129

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 67.9 bits (167), Expect = 1e-12
 Identities = 61/252 (24%), Positives = 93/252 (36%), Gaps = 63/252 (25%)

Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
            V  P     +VL+++ A  +   D+ +  G                 E     PL  G 
Sbjct: 16  EVPVPEPGPDEVLIKVAACGICGTDLHIYEG-----------------EFGAAPPLVPGH 58

Query: 106 DFCGKIVAKGPRVTDLNIDDVV---------------------------YGVIQPHKQGS 138
           +F G +VA G +VT   + D V                            GV +    G 
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRN---GG 115

Query: 139 FSKLILADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLVYPRDKRVLVLG 196
           F++ ++  +  V+K P N+S EEAA    L   +     L I             VLV G
Sbjct: 116 FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPG--------DSVLVFG 167

Query: 197 ASGGVGTMAVQLLKAWDIEVVTTC--SGDAKDLVTSLNPNLVID--YNEPEAMHSIAGAG 252
           A G +G +  QLLK      VT    + +  +L   L     +D    +PEA       G
Sbjct: 168 A-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYG 226

Query: 253 PYDVILDAAGIP 264
            +DV+++A G+P
Sbjct: 227 -FDVVIEATGVP 237

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 66.4 bits (163), Expect = 3e-12
 Identities = 59/220 (26%), Positives = 84/220 (38%), Gaps = 29/220 (13%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +    G   L     +    L   DVL+ +   S+N  D     G G V     R  
Sbjct: 3   ALVVEEQDGGVSLFL-RTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV----TRN- 56

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV----YGVIQPHKQGSFSKLIL 144
                     +P T G D  G +V+           D V    Y +      G F++ + 
Sbjct: 57  ----------YPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNT-DGGFAEYVR 103

Query: 145 ADSALVHKKPSNISDEEAAGVLYT-GLTAWSALQITAAL-GLVYPRDKRVLVLGASGGVG 202
             +  V   P  +S  EA  +L T G TA  AL +         P D  VLV GA+GGVG
Sbjct: 104 VPADWVVPLPEGLSLREAM-ILGTAGFTA--ALSVHRLEDNGQTPEDGPVLVTGATGGVG 160

Query: 203 TMAVQLLKAWDIEVV-TTCSGDAKDLVTSLNPNLVIDYNE 241
           ++AV +L      VV  T   +  D + SL  + V+D  +
Sbjct: 161 SIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDRED 200

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 65.6 bits (161), Expect = 7e-12
 Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 57/207 (27%)

Query: 98  EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQ--------------------- 136
             P+TLG +F G +V  G  VT   + D V  V++P  +                     
Sbjct: 63  TAPVTLGHEFSGVVVEVGSGVTGFKVGDRV--VVEPTIKCGTCGACKRGLYNLCDSLGFI 120

Query: 137 ------GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLT-----AWSALQITAALGLV 185
                 G F++ ++  +  VHK P N+  EEAA      L      AW A++ +      
Sbjct: 121 GLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAA------LVEPLAVAWHAVRRSG----- 169

Query: 186 YPRDKRVLVLGASGGVGTMAVQLLKAW---DIEVVTTCSGD---AKDL--VTSLNPNLVI 237
           +      LVLGA G +G + +  LKA     I V          A++L     L+P    
Sbjct: 170 FKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP---T 225

Query: 238 DYNEPEAMHSIAGAGPYDVILDAAGIP 264
           + +    +  + G G  DV  D AG+ 
Sbjct: 226 EVDVVAEVRKLTGGGGVDVSFDCAGVQ 252

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 63.0 bits (154), Expect = 5e-11
 Identities = 64/264 (24%), Positives = 101/264 (38%), Gaps = 51/264 (19%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           AW+     G+  L   + V  P     +VLV++KA  V   D+ +L G            
Sbjct: 3   AWRFH--KGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDG------------ 48

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVY-------------------- 128
               V  + + PLTLG +  G +V  G  VT+  + D V                     
Sbjct: 49  ---GVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNL 105

Query: 129 ----GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184
               G+      G F++ I+  +  +   P  +   +AA      LT + A+      G 
Sbjct: 106 CLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRA---GE 162

Query: 185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV-VTTCSGDAKDLVTSLNPNLVIDYNEPE 243
           V P +  VLV+G  GG+G  AVQ+ KA    V       +  +L   L  + V++ +  +
Sbjct: 163 VKPGET-VLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLN-SLDD 219

Query: 244 AMHSIAGAGP---YDVILDAAGIP 264
           +      AG    +DVI D  G  
Sbjct: 220 SPKDKKAAGLGGGFDVIFDFVGTQ 243

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 61.0 bits (148), Expect = 3e-10
 Identities = 61/232 (26%), Positives = 87/232 (37%), Gaps = 51/232 (21%)

Query: 45  DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNV---------VLNSLRQLETCSVEP 95
           + V  P L   +VLV + A  VN         Y NV             LR+        
Sbjct: 28  EVVPVPELGPGEVLVAVMAAGVN---------YNNVWAALGEPVSTFAFLRKYGKLD--- 75

Query: 96  VLEFPLTLGRDFCGKIVAKGPRVTDLNI-DDVVYGVIQPHKQ------------------ 136
            L F + +G D  G +   GP VT   + D+VV   +Q                      
Sbjct: 76  -LPFHI-IGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIW 133

Query: 137 ------GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDK 190
                 GSF++  L     +  KP +++ EEAA    TG TA+   Q+            
Sbjct: 134 GYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYR--QLVGWNPAAVKPGD 191

Query: 191 RVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAKDLVTSLNPNLVIDYNE 241
            VL+ GA+GG+G+ A QL +A     V    S +  +   SL    VID N+
Sbjct: 192 NVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVIDRND 243

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 29/175 (16%)

Query: 97  LEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSN 156
           L  PL  G    G++V  G  VT     D V+    PH +      ++  + L+   P  
Sbjct: 18  LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF-CFGPHAE-----RVVVPANLLVPLPDG 71

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV 216
           +  E AA      LTA +A  +           +RV V+G  G VG +A QL KA     
Sbjct: 72  LPPERAA------LTALAATALNGVRDAEPRLGERVAVVGL-GLVGLLAAQLAKA----- 119

Query: 217 VTTCSGDAKDLVTSLNPN-------LVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264
               +G  + +    +         L              G    DV+++A+G P
Sbjct: 120 ----AGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVVIEASGSP 170

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 79/364 (21%), Positives = 135/364 (37%), Gaps = 60/364 (16%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  I   GG + L+  + +  P  K   VL+ +KA  +N  ++              RQ 
Sbjct: 3   AIVIEQPGGPEVLKLRE-IPIPEPKPGWVLIRVKAFGLNRSEIFT------------RQG 49

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVA-------KGPRVTDLNIDDVVYGVIQPHKQGSFSK 141
            + SV+    FP  LG +  G++          G RV          G +     GS+++
Sbjct: 50  HSPSVK----FPRVLGIEAVGEVEEAPGGTFTPGQRVATAM------GGMGRTFDGSYAE 99

Query: 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGV 201
             L  +  V+   S++S  E A +  T  TAW +L    +LGL       +L+ G +  V
Sbjct: 100 YTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSL--FRSLGL--QPGDTLLIRGGTSSV 155

Query: 202 GTMAVQLLKAWDIEVV-TTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDA 260
           G  A++L KA    V  TT S +   L+  L  + V+  +   A    A  G +D +L+ 
Sbjct: 156 GLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLEL 215

Query: 261 AGIP--LDQINSYLPFLKTGKFSKFVTL--RSPFLKNTDSLGLVPGLVKNAFDLLKSNFE 316
            G     D +      L+ G       L      L++ + +  +P  V            
Sbjct: 216 VGTATLKDSLRH----LRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGV-------NLTLT 264

Query: 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLR 376
                       G     P  ++E+  F+  G +       + F E+  A   ++     
Sbjct: 265 GSSS--------GDVPQTP--LQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAF 314

Query: 377 GKII 380
           GK++
Sbjct: 315 GKVV 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 60.3 bits (147), Expect = 4e-10
 Identities = 55/203 (27%), Positives = 79/203 (38%), Gaps = 39/203 (19%)

Query: 100 PLTLGRDFCGKIVAKGPRVTDLNIDDVV-----------------YGVIQPHKQ------ 136
           P   G +F G +V  G  V+   + D V                    +  H+       
Sbjct: 55  PHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTH 114

Query: 137 -GSFSKLIL---ADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRV 192
            GSF++ +    AD  LV + P ++    AAG+     TA+ AL        V P +  V
Sbjct: 115 PGSFAEYVAVPRADVNLV-RLPDDVDFVTAAGLGCRFATAFRAL---VHQARVKPGE-WV 169

Query: 193 LVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPE----AMHS 247
            V G  GGVG  AV +  A    V+     D K +L   L     ++ +E E    A+  
Sbjct: 170 AVHGC-GGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRD 228

Query: 248 IAGAGPYDVILDAAGIPLDQINS 270
           + G G   V +DA GIP    NS
Sbjct: 229 LTGGGA-HVSVDALGIPETCRNS 250

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 59.9 bits (146), Expect = 5e-10
 Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 28/193 (14%)

Query: 56  DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVA-K 114
           DVL+++   S+N  D   + G G VV    R            +P+  G D  G +V+ +
Sbjct: 28  DVLIKVAYSSLNYKDALAITGKGGVV----RS-----------YPMIPGIDAAGTVVSSE 72

Query: 115 GPRVTDLNIDDVV---YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLT 171
            PR  +   D+V+   YG+   H  G +S+     +  +   P  +S  EA  +   G T
Sbjct: 73  DPRFREG--DEVIVTGYGLGVSH-DGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFT 129

Query: 172 AWSALQITA--ALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT-TCSGDAKDLV 228
           A  AL + A    GL  P D  VLV GA+GGVG++AV +L     EVV  T   + +D +
Sbjct: 130 A--ALSVMALERNGLT-PEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL 186

Query: 229 TSLNPNLVIDYNE 241
             L  + VID  +
Sbjct: 187 KELGASEVIDRED 199

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 59.7 bits (145), Expect = 6e-10
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 34/223 (15%)

Query: 45  DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104
           ++V  P L   +VLV + A  VN  +V    G       + ++           + +  G
Sbjct: 33  EDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGR-----DEPYHIG-G 86

Query: 105 RDFCGKIVAKGPRVTDLNIDD--VVYGVI---------------QPHKQ--------GSF 139
            D  G + A G  V +  + D  VV+  +                P ++        GSF
Sbjct: 87  SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSF 146

Query: 140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASG 199
           ++  L  +  +  KP ++S EEAA  +  G TA+  L        V P D  VL+ GASG
Sbjct: 147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRML-FGWNPNTVKPGDN-VLIWGASG 204

Query: 200 GVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE 241
           G+G+MA+QL +A     V   S + K +   +L    VI+  +
Sbjct: 205 GLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRD 247

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 59.4 bits (145), Expect = 7e-10
 Identities = 61/268 (22%), Positives = 96/268 (35%), Gaps = 68/268 (25%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML--GGYGNVVLNSLRQLETCSVE 94
           G  +L+  +    P     +VLV ++AV +   DV     G  G+ V+            
Sbjct: 6   GPGDLRLEE-RPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKE---------- 54

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPH-------------------- 134
                P+ LG +  G +VA G  VT L + D V   I+P                     
Sbjct: 55  -----PMVLGHESAGTVVAVGSGVTHLKVGDRV--AIEPGVPCRTCEFCKSGRYNLCPDM 107

Query: 135 -------KQGSFSKLILADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLV 185
                    G+  + +   +   HK P N+S EE A V  L  G+   +  +     G  
Sbjct: 108 RFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGV--HACRRAGVRPG-- 163

Query: 186 YPRDKRVLVLGASGGVGTMAVQLLKAW---DIEVVTTCSGD----AKDL--VTSLNPNLV 236
                 VLV GA G +G +   + KA+    + VVT         AK+L    ++N    
Sbjct: 164 ----DTVLVFGA-GPIGLLTAAVAKAFGATKV-VVTDIDPSRLEFAKELGATHTVNVRTE 217

Query: 237 IDYNEPEAMHSIAGAGPYDVILDAAGIP 264
                 E +  + G    DV+++  G  
Sbjct: 218 DTPESAEKIAELLGGKGPDVVIECTGAE 245

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 59.5 bits (145), Expect = 7e-10
 Identities = 64/281 (22%), Positives = 107/281 (38%), Gaps = 55/281 (19%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQ 87
           A ++  YG    L+   +V  P      VLV +    V   D+ ++ G +G ++      
Sbjct: 3   AARLYEYGKPLRLE---DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGIL------ 53

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD--VVYGVI---------QPHKQ 136
                     + P TLG +  G +   G  V  L   D  VV+            +  + 
Sbjct: 54  --------PYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEEN 105

Query: 137 -------------GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183
                        G F++ +L  S  + K P  +   EAA +   GLTA+ A  +  AL 
Sbjct: 106 YCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA--VKKALP 163

Query: 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDY---- 239
            + P    V+V+G  GG+G +AVQ+L+A  +   T  + D  +    L   L  D+    
Sbjct: 164 YLDP-GSTVVVIGV-GGLGHIAVQILRA--LTPATVIAVDRSEEALKLAERLGADHVLNA 219

Query: 240 --NEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTG 278
             +  E +  + G    D ++D  G   + +      L  G
Sbjct: 220 SDDVVEEVRELTGGRGADAVIDFVGSD-ETLALAAKLLAKG 259

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 58.9 bits (143), Expect = 9e-10
 Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 39/187 (20%)

Query: 104 GRDFCGKIV---------AKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKP 154
           G D  G +          A G RV  L               G++++L+   +  +   P
Sbjct: 56  GWDAAGVVERAAADGSGPAVGARVVGLGAM------------GAWAELVAVPTGWLAVLP 103

Query: 155 SNISDEEAAGVLYTGLTAWSAL-QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD 213
             +S  +AA +   G+TA  AL +    LG      +RVLV GASGGVG  AVQL     
Sbjct: 104 DGVSFAQAATLPVAGVTALRALRRGGPLLG------RRVLVTGASGGVGRFAVQLAALAG 157

Query: 214 IEVVTTCSGDAK--DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSY 271
             VV      A+   L       +V+  +E      ++GA P D+++D+ G P  Q+   
Sbjct: 158 AHVVAVVGSPARAEGLRELGAAEVVVGGSE------LSGA-PVDLVVDSVGGP--QLARA 208

Query: 272 LPFLKTG 278
           L  L  G
Sbjct: 209 LELLAPG 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 58.7 bits (143), Expect = 1e-09
 Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 53/218 (24%)

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV-------------------IQPHK 135
           P  + PL  G +  G++ A GP VT  ++ D V GV                   +  + 
Sbjct: 54  PPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRV-GVPWLGSTCGECRYCRSGRENLCDNA 112

Query: 136 Q-------GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPR 188
           +       G +++ ++AD    +  P +  DEEAA +L  G+  + AL++          
Sbjct: 113 RFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGL-----KP 167

Query: 189 DKRVLVLGASGGVGTMAVQLLKAWDIEV-VTTCSGDAKDLVTSLNPNLVIDYNE--PEAM 245
            +R+ + G  G    +A+Q+ +    EV   T SG+ ++L   L  +   D ++  PE +
Sbjct: 168 GQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLPPEPL 226

Query: 246 HSI---AGAGPYDVILDA------------AGIPLDQI 268
            +    A  G   ++  A            AGI +  I
Sbjct: 227 DAAIIFAPVG--ALVPAALRAVKKGGRVVLAGIHMSDI 262

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 77/349 (22%), Positives = 127/349 (36%), Gaps = 58/349 (16%)

Query: 47  VKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106
           V  P      VL+    +S++P    M G          R  +  S  P    P+ LG  
Sbjct: 32  VDVPEPGEGQVLLRTLYLSLDP---YMRG----------RMSDAPSYAP----PVELGEV 74

Query: 107 FCGKIVAKG--PRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAA- 163
             G  VAK            D+V GV        + +  ++D   + K   + +   A  
Sbjct: 75  MVGGTVAKVVASNHPGFQPGDIVVGV------SGWQEYAISDGEGLRKLDPSPAPLSAYL 128

Query: 164 GVL-YTGLTAWSALQITAALGLVYPRD-KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS 221
           GVL   GLTA+  L          P+  + V+V  A+G VG++  Q+ K     VV    
Sbjct: 129 GVLGMPGLTAYFGLLDIGQ-----PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAG 183

Query: 222 GDAK-DLVTS-LNPNLVIDYNEPEAMHSIAGAGP--YDVILDAAGIP-----LDQINSYL 272
           G  K D +T  L  +  IDY   +   ++  A P   DV  +  G       L  +N + 
Sbjct: 184 GAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFA 243

Query: 273 PFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM 332
                G  S++     P       L +   L    F ++ S+++                
Sbjct: 244 RIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGF-IVASDYDQR-------------- 288

Query: 333 PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
             P A++E+  +++ G+I+            P AF  +  G   GK+++
Sbjct: 289 -FPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVV 336

Length = 340

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 82/385 (21%), Positives = 140/385 (36%), Gaps = 85/385 (22%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A Q++  GG  EL   D    P+    +VL++++A  V   D  +  G            
Sbjct: 3   AVQVTEPGGPLELVERD---VPLPGPGEVLIKVEACGVCHSDAFVKEG------------ 47

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV--------YGVIQPHKQGSF- 139
                 P L +P   G +  G+I A G  V+   + D V         G     ++G F 
Sbjct: 48  ----AMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFV 103

Query: 140 -----------------SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL 182
                              ++    AL    P ++   EAA +L  G+T ++AL+ + A 
Sbjct: 104 HCENGKVTGVTRDGGYAEYMLAPAEALARI-PDDLDAAEAAPLLCAGVTTFNALRNSGAK 162

Query: 183 GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE 241
               P D  V V G  GG+G +AVQ         V    G  K DL   L  +  ID ++
Sbjct: 163 ----PGD-LVAVQGI-GGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSK 216

Query: 242 ---PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG 298
               EA+  + GA    +IL  A      I++ +  L      K +            LG
Sbjct: 217 EDVAEALQELGGA---KLILATAPNA-KAISALVGGLAPR--GKLLI-----------LG 259

Query: 299 LVPGLVK-NAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSK 357
                V  +   L+             +I  G+        ++  KF     ++P+++  
Sbjct: 260 AAGEPVAVSPLQLIM---------GRKSIH-GWPSGTALDSEDTLKFSALHGVRPMVE-T 308

Query: 358 YNFCELPTAFEKVQQGHLRGKIILN 382
           +   +   A++++  G  R +++L 
Sbjct: 309 FPLEKANEAYDRMMSGKARFRVVLT 333

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 56.3 bits (136), Expect = 6e-09
 Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 33/239 (13%)

Query: 31  QISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLET 90
           +   +GG + LQ  +          +V VE KA+ +N ID  +  G              
Sbjct: 6   EFHKHGGPEVLQAVEFTPAD-PAENEVQVENKAIGINYIDTYIRSG-------------- 50

Query: 91  CSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD-VVYGVIQPHKQGSFSKL--ILADS 147
             + P    P  LG +  G +   G  V  + + D VVY        G++S +  + AD 
Sbjct: 51  --LYPPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYA---QSALGAYSSVHNVPADK 105

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
           A +   P  IS E+AA     GLT +  L+ T     + P D++ L   A+GGVG +A Q
Sbjct: 106 AAI--LPDAISFEQAAASFLKGLTVYYLLRKTYE---IKP-DEQFLFHAAAGGVGLIACQ 159

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE---PEAMHSIAGAGPYDVILDAAG 262
             KA   +++ T     K           VI+Y E    E +  I G     V+ D+ G
Sbjct: 160 WAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVG 218

Length = 327

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 55.6 bits (135), Expect = 1e-08
 Identities = 59/199 (29%), Positives = 85/199 (42%), Gaps = 38/199 (19%)

Query: 52  LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKI 111
           L   DV VE+   ++N  D   + G G +V                 FPL  G D  G +
Sbjct: 25  LPEGDVTVEVHYSTLNYKDGLAITGKGGIVR---------------TFPLVPGIDLAGTV 69

Query: 112 V-------AKGPRVTDLNIDDVV--YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEA 162
           V         G RV       V+  +GV + H  G +++     +  +   P  +S  +A
Sbjct: 70  VESSSPRFKPGDRV-------VLTGWGVGERHW-GGYAQRARVKADWLVPLPEGLSARQA 121

Query: 163 AGVLYTGLTAWSALQITAAL--GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVV-TT 219
             +   G TA   L + A    G V P D  VLV GA+GGVG++AV LL     EVV +T
Sbjct: 122 MAIGTAGFTA--MLCVMALEDHG-VTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVAST 178

Query: 220 CSGDAKDLVTSLNPNLVID 238
              +  D + SL  + +ID
Sbjct: 179 GRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 53/201 (26%)

Query: 47  VKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
           V  P     +VL+++ A  +   D+    G Y  V                 E P+ LG 
Sbjct: 19  VPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV-----------------ETPVVLGH 61

Query: 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------PHKQ-------GSFS 140
           +F G IV  GP V    + D V                       PH++       G F+
Sbjct: 62  EFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFA 121

Query: 141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL--GLVYPRDKRVLVLGAS 198
           + +L     +H+ P N+S E AA      LT   A+ + A      + P D  V+V G  
Sbjct: 122 EYVLVPEESLHELPENLSLEAAA------LTEPLAVAVHAVAERSGIRPGD-TVVVFG-P 173

Query: 199 GGVGTMAVQLLKAWDIEVVTT 219
           G +G +A Q+ K     VV  
Sbjct: 174 GPIGLLAAQVAKLQGATVVVV 194

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 51.1 bits (123), Expect = 3e-08
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 18/79 (22%)

Query: 56  DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKG 115
           +VLV +KA  +   D+ +  G                  P ++ PL LG +  G +   G
Sbjct: 3   EVLVRVKAAGICGSDLHIYRGE----------------PPPVKLPLILGHEGAGIVEEVG 46

Query: 116 PRVTDLNIDDVVYGVIQPH 134
           P VT L + D V  V+ P 
Sbjct: 47  PGVTGLKVGDRV--VVYPL 63

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 53.0 bits (128), Expect = 8e-08
 Identities = 80/371 (21%), Positives = 125/371 (33%), Gaps = 94/371 (25%)

Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104
            V  P     +VLV+++A  +   DV  + GG+ ++                 + P  LG
Sbjct: 16  EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL-----------------KPPRILG 58

Query: 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPH---------KQGSFS-------KLILADSA 148
            +  G+IV  G  VT   + D V   + PH          +G+ +          L D  
Sbjct: 59  HEIAGEIVEVGDGVTGFKVGDRV--FVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGG 116

Query: 149 L---------------VHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLVYPRDKR 191
                           V K P N+S EEAA V  L   + A     I             
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKP--------GDT 168

Query: 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTC--SGDAKDLVTSLNPNLVIDYNEPEAMHSI- 248
           VLV+GA G +G +   L KA     V     +    +    L  +  ID  E + +  + 
Sbjct: 169 VLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVR 227

Query: 249 ---AGAGPYDVILDAAGIPLDQINSYLPFLKT-GKFSKFVTLRSPFLKNTDSLGLVPGLV 304
               G G  DV++ A G P +     L  ++  G+   F        K +          
Sbjct: 228 ELTDGRG-ADVVIVATGSP-EAQAQALELVRKGGRILFF----GGLPKGSTV-------- 273

Query: 305 KNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCE 362
               D   +     E+  T +         P   KE  + I  G+I  K +I  ++   +
Sbjct: 274 --NIDP--NLIHYREITITGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLED 324

Query: 363 LPTAFEKVQQG 373
           +  AFE    G
Sbjct: 325 IEEAFELAADG 335

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 69/374 (18%), Positives = 113/374 (30%), Gaps = 84/374 (22%)

Query: 35  YGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQLETCSV 93
           Y G  +++  +    PI    DVL+ + A  +   D+    GG                V
Sbjct: 7   YVGGGDVRLEE-PPPPIPGPGDVLIRVTATGICGSDLHIYRGGEP-------------FV 52

Query: 94  EPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV-------------------------- 127
            P       LG +F G++V  G  V    + D V                          
Sbjct: 53  PPGDII---LGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPG 108

Query: 128 ---YGVIQPHKQGSFSKLILADSALVHKK-PSNISDEEAAGV-LYTGLTAWSALQITAAL 182
              Y  +     G F++ +   +     K P  I +E AA        TA+      AA+
Sbjct: 109 FYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLA--TAYHGHAERAAV 166

Query: 183 GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--DLVTSLNPNLVIDYN 240
                    V+V+GA G +G +A+ L K     VV       +  +L        V+   
Sbjct: 167 ----RPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP 221

Query: 241 ----EPEAMHSIAGAGPYDVILDAAGIP--LDQINSYLPFLKT-------GKFSKFVTLR 287
                   +  + G    DV+++A G P  LDQ    L    T       G     +   
Sbjct: 222 SEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAG 281

Query: 288 SPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER 347
               K     G +    +  F+         +L  +  I     +     + +  +  E 
Sbjct: 282 LVVSKELTLRGSLRPSGREDFERAL------DLLASGKIDPEKLITHRLPLDDAAEAYEL 335

Query: 348 ------GQIKPVID 355
                   IK V+ 
Sbjct: 336 FADRKEEAIKVVLK 349

Length = 350

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 43/182 (23%)

Query: 47  VKTPILKSKDVLVEMKAVSVNPIDVA-MLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
            + P     +VL++++A  +NP D+  + G YG     S + L           P+  G 
Sbjct: 23  PEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYG-----STKAL-----------PVPPGF 66

Query: 106 DFCGKIVAKGP----------RVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPS 155
           +  G +VA G           RV                  G++++  +AD+      P 
Sbjct: 67  EGSGTVVAAGGGPLAQSLIGKRVA-----------FLAGSYGTYAEYAVADAQQCLPLPD 115

Query: 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE 215
            +S E+ A      LTA   L+     G      K V+   A+  +G M V+L KA  I+
Sbjct: 116 GVSFEQGASSFVNPLTALGMLETAREEG-----AKAVVHTAAASALGRMLVRLCKADGIK 170

Query: 216 VV 217
           V+
Sbjct: 171 VI 172

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 60/267 (22%), Positives = 95/267 (35%), Gaps = 68/267 (25%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML--GGYGNVVLNSLRQLETCSVE 94
            A +L+  +    P     +V V + A  +   D+     GG+G V L   R+       
Sbjct: 5   AAGDLRV-EERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRL---RE------- 53

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV--------------------------- 127
                P+ LG +  G + A GP VT L     V                           
Sbjct: 54  -----PMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRF 108

Query: 128 YG--VIQPHKQGSFSKLILADSALVHKKPSNISDEEAA-----GVLYTGLTAWSALQITA 180
            G  +  PH QG F + ++ D++     P  +S   AA      V      A  A+    
Sbjct: 109 LGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAV------ALHAVNRAG 162

Query: 181 ALGLVYPRDKRVLVLGASGGVGTMAVQLLK---AWDIEVVTTCSGDAKDLVTSLNPNLVI 237
            L       KRVLV GA G +G + V   +   A +I V T  +     +  ++  +  +
Sbjct: 163 DL-----AGKRVLVTGA-GPIGALVVAAARRAGAAEI-VATDLADAPLAVARAMGADETV 215

Query: 238 DYNEPEAMHSIAGAGPYDVILDAAGIP 264
           +          A  G +DV+ +A+G P
Sbjct: 216 NLARDPLAAYAADKGDFDVVFEASGAP 242

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 200 GVGTMAVQLLKAW-DIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPY 254
           GVG  AVQL KA     V+     + K +L   L  + VI+Y +    E +  + G    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 255 DVILDAAGIPLDQINSYLPFLKTG 278
           DV++D  G P   +   L  L+ G
Sbjct: 61  DVVIDCVGAP-ATLEQALELLRPG 83

Length = 131

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.1 bits (123), Expect = 4e-07
 Identities = 54/235 (22%), Positives = 83/235 (35%), Gaps = 63/235 (26%)

Query: 57  VLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGP 116
            LV +    +   D+ +  GY                     FP   G +F G IV +GP
Sbjct: 27  ALVRVLLAGICNTDLEIYKGYYP-------------------FPGVPGHEFVG-IVEEGP 66

Query: 117 -------RVT-DLNIDD-----------------VVYGVIQPHKQGSFSKLILADSALVH 151
                  RV  ++NI                    V G++   + G+F++ +      +H
Sbjct: 67  EAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVD--RDGAFAEYLTLPLENLH 124

Query: 152 KKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPR-DKRVLVLGASGGVGTMAVQLLK 210
             P  + DE+A  V    L A  AL+I      V      +V VLG  G +G +  Q+L 
Sbjct: 125 VVPDLVPDEQA--VFAEPLAA--ALEILE---QVPITPGDKVAVLGD-GKLGLLIAQVLA 176

Query: 211 AWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264
               +VV       K  L   L    V+              G +DV+++A G P
Sbjct: 177 LTGPDVVLVGRHSEKLALARRLGVETVLPDEAESEG------GGFDVVVEATGSP 225

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 50.2 bits (121), Expect = 6e-07
 Identities = 55/241 (22%), Positives = 86/241 (35%), Gaps = 67/241 (27%)

Query: 168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-D 226
           TGLTA+  L             + V+V  A+G VG++  Q+ K     VV     D K  
Sbjct: 129 TGLTAYFGLTEIGKPK----PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR 184

Query: 227 LVTSLNPNL----VIDYNEPEAMHSIAGAGP--YDV--------ILDAAGIPLDQINSYL 272
            +      L     I+Y  P+   ++  A P   DV        ILDAA   L  +N   
Sbjct: 185 WLVE---ELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILDAA---LTLLN--- 235

Query: 273 PFLKTGKFSKFVTLRSPFLKNTDSLGLV-------PGLVKNAFDLLKSNFESGELCKTNT 325
                 K  +               G +       P   KN  +++          K  T
Sbjct: 236 ------KGGRIAL-----------CGAISQYNATEPPGPKNLGNIIT---------KRLT 269

Query: 326 IRWGFFMP-----IPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKII 380
           ++ GF +       P A+ E+ K++  G++K   D        P AF  +  G   GK++
Sbjct: 270 MQ-GFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLV 328

Query: 381 L 381
           +
Sbjct: 329 V 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 55/212 (25%), Positives = 85/212 (40%), Gaps = 42/212 (19%)

Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVV-YGVI-------QPHK--------------- 135
           +P+  G +  G++V  G  V+   + D+V  GVI        P K               
Sbjct: 63  YPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYN 122

Query: 136 ---------QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186
                    QG F+  ++ D   V K P  ++ E+AA +L  G+T +S L      GL  
Sbjct: 123 DVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLS---HFGLKQ 179

Query: 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--DLVTSLNPNLVIDYNEPEA 244
               R  +LG  GGVG M V++ KA    V    S D K  + +  L  +  +  ++   
Sbjct: 180 S-GLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAE 237

Query: 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLK 276
           M   A +   D I+D   +    +  YL  LK
Sbjct: 238 MQEAADS--LDYIIDTVPV-FHPLEPYLSLLK 266

Length = 357

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 57/248 (22%), Positives = 92/248 (37%), Gaps = 56/248 (22%)

Query: 47  VKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106
           +  P+  + +VLV +K V +   D+ +  G         R        P   +P  LG +
Sbjct: 17  IPEPVPGAGEVLVRVKRVGICGSDLHIYHG---------RN-------PFASYPRILGHE 60

Query: 107 FCGKIVAKGPRVTDLNIDDVVY------------------------GVIQPHKQGSFSKL 142
             G++V  G  V  L + D V                          V+  H+ G F++ 
Sbjct: 61  LSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEY 120

Query: 143 ILADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLVYPRDKRVLVLGASGG 200
           I+   A     P  +S ++AA V  L  G  A     +TA           VLV+GA G 
Sbjct: 121 IVV-PADALLVPEGLSLDQAALVEPLAIGAHAVRRAGVTA--------GDTVLVVGA-GP 170

Query: 201 VGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVI---DYNEPEAMHSIAGAGPYDV 256
           +G   +Q+ KA    V+     D + +    L  +  I   D +    +  +      DV
Sbjct: 171 IGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADV 230

Query: 257 ILDAAGIP 264
           ++DA G P
Sbjct: 231 VIDATGNP 238

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 62/265 (23%), Positives = 90/265 (33%), Gaps = 69/265 (26%)

Query: 47  VKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106
           V  P L+   VLV ++   V   DV  + G                  P +  P+ LG +
Sbjct: 18  VPLPDLEPGAVLVRVRLAGVCGSDVHTVAG----------------RRPRVPLPIILGHE 61

Query: 107 FCGKIVAKGPRVTDLNI-------DDVVYGVI---------------------------- 131
             G++VA G  VT           D V + V                             
Sbjct: 62  GVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEAS 121

Query: 132 --QPHKQGSFSKLI--LADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP 187
              PH  G +++ I     +A+V + P N+ DE AA       T  +AL      G V  
Sbjct: 122 CDDPHLSGGYAEHIYLPPGTAIV-RVPDNVPDEVAAPANCALATVLAALD---RAGPV-G 176

Query: 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSLNPNLVIDYNEP--- 242
               V+V GA G +G  AV   K      V    G     +L      +  ID +E    
Sbjct: 177 AGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDP 235

Query: 243 ---EAMHSIAGAGPYDVILDAAGIP 264
                +  I G    DV+++A+G P
Sbjct: 236 QRRAIVRDITGGRGADVVIEASGHP 260

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 36/196 (18%)

Query: 100 PLTLGRDFCGKIVAKGP----------RVTDL---NIDDVVYGVI--QPHKQGSFSKLIL 144
            + LG +FCG++V  GP          RVT L            I   P   G +++ +L
Sbjct: 64  DIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYML 123

Query: 145 ADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
              AL+ + P  +S E+AA    L  GL A    ++T          +  LV+G  G +G
Sbjct: 124 LSEALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTP--------GEVALVIGC-GPIG 174

Query: 203 TMAVQLLKAWDIE--VVTTCSGDAKDLVTSLNPNLVIDYNE--PEAMHSI----AGAGPY 254
              +  LKA  +   V +  S + + L  ++  ++V+D     P A  +     AG    
Sbjct: 175 LAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKP 234

Query: 255 DVILDAAGIP--LDQI 268
            VI +  G P  + QI
Sbjct: 235 AVIFECVGAPGLIQQI 250

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 96  VLEFPLTLGRDFCGKIV-AKGPRVTDLNIDDVV---YGVIQPHKQGSFSKLILADSALVH 151
           V  +P   G D  G +V +  PR      D+V+   Y +   H  G +S+     +  V 
Sbjct: 54  VKRYPFIPGIDLAGTVVESNDPRFKPG--DEVIVTSYDLGVSH-HGGYSEYARVPAEWVV 110

Query: 152 KKPSNISDEEAAGVLYTGLTAWSALQITAAL--GLVYPRDKRVLVLGASGGVGTMAVQLL 209
             P  ++ +EA  +   G TA  AL I      GL  P    VLV GA+GGVG++AV +L
Sbjct: 111 PLPKGLTLKEAMILGTAGFTA--ALSIHRLEENGLT-PEQGPVLVTGATGGVGSLAVSIL 167

Query: 210 KAWDIEVV-TTCSGDAKDLVTSLNPNLVI 237
                EVV +T   DA D +  L    VI
Sbjct: 168 AKLGYEVVASTGKADAADYLKKLGAKEVI 196

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 44.1 bits (104), Expect = 7e-05
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 14/156 (8%)

Query: 137 GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG 196
           G +S +I+ D   V + P N+  +  A +L  G+T +S ++     G+  P  K + V G
Sbjct: 136 GGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKY---YGMTEP-GKHLGVAG 191

Query: 197 ASGGVGTMAVQLLKAW--DIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPY 254
             GG+G +AV++ KA+   + V+++ S    + +  L  +  +   +PE M   A  G  
Sbjct: 192 L-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMK--AAIGTM 248

Query: 255 DVILDAAGIPLDQINSYLPFLKTGKFS-KFVTLRSP 289
           D I+D     +  +++  P L   K + K +TL  P
Sbjct: 249 DYIIDT----VSAVHALGPLLGLLKVNGKLITLGLP 280

Length = 360

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 41.2 bits (97), Expect = 6e-04
 Identities = 45/168 (26%), Positives = 67/168 (39%), Gaps = 21/168 (12%)

Query: 109 GKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAG-VLY 167
           G++VA GP V  L + D V G+      G+F++  LAD+      PS +  +   G  L 
Sbjct: 61  GRVVALGPGVRGLAVGDRVAGLSG----GAFAEYDLADADHAVPLPSLLDGQAFPGEPLG 116

Query: 168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS--GDAK 225
             L  +    I A         K V V+GA G +G + +QL  A     V          
Sbjct: 117 CALNVFRRGWIRAG--------KTVAVIGA-GFIGLLFLQLAAAAGARRVIAIDRRPARL 167

Query: 226 DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAG--IPLDQI 268
            L   L    V+  +     E +  + G    DV+++A G   PLD  
Sbjct: 168 ALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLA 215

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 37/226 (16%)

Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104
            V  P   + +VLV      ++  D+  + G YG               +P L  P   G
Sbjct: 20  EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYG--------------YKPEL--PAIGG 63

Query: 105 RDFCGKIVAKGPRVTDLNIDD--VVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEA 162
            +  G + A G  V  L +     V  V      G++++  +A +  +   P  ISDE A
Sbjct: 64  SEAVGVVDAVGEGVKGLQVGQRVAVAPV-----HGTWAEYFVAPADGLVPLPDGISDEVA 118

Query: 163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGG-VGTMAVQLLKAWDIEVVTTCS 221
           A ++   L+A   L     LG V P     L+  A+GG VG +   L  A  I V+    
Sbjct: 119 AQLIAMPLSALMLLD---FLG-VKPGQ--WLIQNAAGGAVGKLVAMLAAARGINVINLVR 172

Query: 222 GDA--KDLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAG 262
            DA   +L  +L    V+   +P   + +   AG  P  V LD+ G
Sbjct: 173 RDAGVAEL-RALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVG 217

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 44/145 (30%)

Query: 102 TLGRDFCGKIVAKGPRVTDLNIDDVVYG--VIQ--------------------------P 133
            LG +F G++V  GP V  L + D V     I                           P
Sbjct: 56  VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSP 115

Query: 134 HKQGSFSKLI---LADSALVHKKPSNISDEEA---AGVLYTGLTAWSALQITAALGLVYP 187
           +  G+ ++ +    AD  L+ K P  +SDE A     +L TG   +      A    V P
Sbjct: 116 NLDGAQAEYVRVPFADGTLL-KLPDGLSDEAALLLGDILPTG---YFG----AKRAQVRP 167

Query: 188 RDKRVLVLGASGGVGTMAVQLLKAW 212
               V V+G  G VG  AV   +  
Sbjct: 168 -GDTVAVIGC-GPVGLCAVLSAQVL 190

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNP---NLVIDYNEPEAMH 246
            ++L++G +  +G   V+ L A   +V     G  K     L     ++V D N+ +A+ 
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKP---DLPEGVEHIVGDRNDRDALE 57

Query: 247 SIAGAGPYDVILD 259
            + G   +DV++D
Sbjct: 58  ELLGGEDFDVVVD 70

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 13/157 (8%)

Query: 136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL 195
           QG +S +I+ D   V   P  +  +  A +L  G+T +S ++     G+     KR+ V 
Sbjct: 129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKY---YGMTKESGKRLGVN 185

Query: 196 GASGGVGTMAVQLLKAWD--IEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGP 253
           G  GG+G +AV++ KA+   + V++  S   ++ +  L  +  +   + + M      G 
Sbjct: 186 GL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKE--AVGT 242

Query: 254 YDVILDAAGIPLDQINSYLPFLKTGKFS-KFVTLRSP 289
            D I+D         ++ LP     K S K V L  P
Sbjct: 243 MDFIIDTVSAE----HALLPLFSLLKVSGKLVALGLP 275

Length = 375

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	383
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG0023|consensus	360		100.0
KOG1197|consensus	336		100.0
KOG0024|consensus	354		100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0022|consensus	375		100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
KOG1198|consensus	347		100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
KOG0025|consensus	354		100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.97
KOG1202|consensus	2376		99.96
KOG1196|consensus	343		99.96
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.94
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.74
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.38
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.38
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.96
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	98.95
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.95
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.92
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.87
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.64
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.62
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.57
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.56
PLN02494	477	adenosylhomocysteinase	97.5
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.46
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.33
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.31
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.14
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.12
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.11
PRK08324	681	short chain dehydrogenase; Validated	97.07
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.06
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.97
PRK05993	277	short chain dehydrogenase; Provisional	96.96
PRK12742	237	oxidoreductase; Provisional	96.95
PRK06182	273	short chain dehydrogenase; Validated	96.87
PRK12367	245	short chain dehydrogenase; Provisional	96.86
KOG1205|consensus	282		96.84
PRK05693	274	short chain dehydrogenase; Provisional	96.79
PRK06139	330	short chain dehydrogenase; Provisional	96.76
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	96.76
PRK06057	255	short chain dehydrogenase; Provisional	96.72
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.69
PRK07060	245	short chain dehydrogenase; Provisional	96.68
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.67
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	96.65
PRK05872	296	short chain dehydrogenase; Provisional	96.65
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.59
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.57
PRK05866	293	short chain dehydrogenase; Provisional	96.55
PLN03209	576	translocon at the inner envelope of chloroplast su	96.43
PRK07825	273	short chain dehydrogenase; Provisional	96.41
PRK12828	239	short chain dehydrogenase; Provisional	96.41
PRK12829	264	short chain dehydrogenase; Provisional	96.38
PRK07831	262	short chain dehydrogenase; Provisional	96.36
KOG1199|consensus	260		96.32
PRK07904	253	short chain dehydrogenase; Provisional	96.32
PRK06179	270	short chain dehydrogenase; Provisional	96.31
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.3
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.3
PRK08017	256	oxidoreductase; Provisional	96.29
PRK06196	315	oxidoreductase; Provisional	96.28
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.25
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.25
PRK07109	334	short chain dehydrogenase; Provisional	96.22
KOG1200|consensus	256		96.22
PRK06483	236	dihydromonapterin reductase; Provisional	96.21
PRK06500	249	short chain dehydrogenase; Provisional	96.2
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.2
PRK06180	277	short chain dehydrogenase; Provisional	96.18
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.16
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
KOG1201|consensus	300		96.14
PRK08177	225	short chain dehydrogenase; Provisional	96.13
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.13
PRK08265	261	short chain dehydrogenase; Provisional	96.13
PRK07576	264	short chain dehydrogenase; Provisional	96.12
PRK08339	263	short chain dehydrogenase; Provisional	96.12
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.12
PRK07814	263	short chain dehydrogenase; Provisional	96.11
PRK07856	252	short chain dehydrogenase; Provisional	96.05
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.02
PRK08267	260	short chain dehydrogenase; Provisional	96.01
PRK05854	313	short chain dehydrogenase; Provisional	96.01
PRK06523	260	short chain dehydrogenase; Provisional	96.01
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.99
PRK06841	255	short chain dehydrogenase; Provisional	95.98
PRK07478	254	short chain dehydrogenase; Provisional	95.98
PRK07063	260	short chain dehydrogenase; Provisional	95.95
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.94
PRK05717	255	oxidoreductase; Validated	95.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.93
PRK12939	250	short chain dehydrogenase; Provisional	95.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.92
PRK08589	272	short chain dehydrogenase; Validated	95.91
PRK05867	253	short chain dehydrogenase; Provisional	95.91
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.9
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.89
PRK08264	238	short chain dehydrogenase; Validated	95.89
PRK06194	287	hypothetical protein; Provisional	95.85
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.85
PRK06398	258	aldose dehydrogenase; Validated	95.84
PRK09291	257	short chain dehydrogenase; Provisional	95.83
PRK09072	263	short chain dehydrogenase; Provisional	95.82
PRK07890	258	short chain dehydrogenase; Provisional	95.79
PRK06949	258	short chain dehydrogenase; Provisional	95.79
PRK07062	265	short chain dehydrogenase; Provisional	95.78
PRK05876	275	short chain dehydrogenase; Provisional	95.78
PRK07806	248	short chain dehydrogenase; Provisional	95.77
PLN02253	280	xanthoxin dehydrogenase	95.76
PRK06720	169	hypothetical protein; Provisional	95.74
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.74
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	95.72
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.71
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.67
PRK06484	520	short chain dehydrogenase; Validated	95.66
PRK08628	258	short chain dehydrogenase; Provisional	95.65
PRK07454	241	short chain dehydrogenase; Provisional	95.65
PRK07832	272	short chain dehydrogenase; Provisional	95.64
PRK07677	252	short chain dehydrogenase; Provisional	95.64
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.63
PRK07577	234	short chain dehydrogenase; Provisional	95.6
PRK06114	254	short chain dehydrogenase; Provisional	95.6
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.56
PRK05884	223	short chain dehydrogenase; Provisional	95.55
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.54
PRK07774	250	short chain dehydrogenase; Provisional	95.54
PRK12743	256	oxidoreductase; Provisional	95.53
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.52
PRK07067	257	sorbitol dehydrogenase; Provisional	95.51
KOG0725|consensus	270		95.49
PRK07326	237	short chain dehydrogenase; Provisional	95.49
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.49
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	95.48
PRK06198	260	short chain dehydrogenase; Provisional	95.47
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.46
PRK08862	227	short chain dehydrogenase; Provisional	95.44
PRK06125	259	short chain dehydrogenase; Provisional	95.43
PRK06172	253	short chain dehydrogenase; Provisional	95.43
PRK07024	257	short chain dehydrogenase; Provisional	95.41
PRK08278	273	short chain dehydrogenase; Provisional	95.39
PRK08303	305	short chain dehydrogenase; Provisional	95.39
PRK07035	252	short chain dehydrogenase; Provisional	95.37
PRK09186	256	flagellin modification protein A; Provisional	95.37
PRK06484	520	short chain dehydrogenase; Validated	95.36
PRK06953	222	short chain dehydrogenase; Provisional	95.32
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.32
PRK06128	300	oxidoreductase; Provisional	95.32
PRK06197	306	short chain dehydrogenase; Provisional	95.3
PRK08643	256	acetoin reductase; Validated	95.3
PRK09242	257	tropinone reductase; Provisional	95.3
PRK06138	252	short chain dehydrogenase; Provisional	95.29
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	95.29
COG2910	211	Putative NADH-flavin reductase [General function p	95.28
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.26
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.26
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.25
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.24
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.24
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.23
PRK07074	257	short chain dehydrogenase; Provisional	95.23
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.22
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.21
PRK08226	263	short chain dehydrogenase; Provisional	95.17
PRK08263	275	short chain dehydrogenase; Provisional	95.16
PRK09135	249	pteridine reductase; Provisional	95.16
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.15
PRK07023	243	short chain dehydrogenase; Provisional	95.1
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.08
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.08
PRK06181	263	short chain dehydrogenase; Provisional	95.08
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.08
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.07
PRK06482	276	short chain dehydrogenase; Provisional	95.07
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.07
PRK07985	294	oxidoreductase; Provisional	95.06
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.03
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.02
PRK07791	286	short chain dehydrogenase; Provisional	95.02
PLN02653	340	GDP-mannose 4,6-dehydratase	95.01
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.96
PLN02780	320	ketoreductase/ oxidoreductase	94.96
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.92
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.91
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.91
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.9
PRK05875	276	short chain dehydrogenase; Provisional	94.9
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	94.9
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.89
PRK08703	239	short chain dehydrogenase; Provisional	94.89
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.87
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.86
PRK07775	274	short chain dehydrogenase; Provisional	94.83
PRK10538	248	malonic semialdehyde reductase; Provisional	94.81
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.81
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.8
CHL00194	317	ycf39 Ycf39; Provisional	94.8
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.77
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.76
PRK06914	280	short chain dehydrogenase; Provisional	94.72
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.72
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	94.72
PRK06701	290	short chain dehydrogenase; Provisional	94.71
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.66
PRK12937	245	short chain dehydrogenase; Provisional	94.65
PRK08251	248	short chain dehydrogenase; Provisional	94.64
PRK09134	258	short chain dehydrogenase; Provisional	94.62
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	94.59
PRK05650	270	short chain dehydrogenase; Provisional	94.59
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.56
PRK12935	247	acetoacetyl-CoA reductase; Provisional	94.56
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	94.55
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.53
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.52
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.51
KOG1208|consensus	314		94.48
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.45
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.44
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	94.41
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.38
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.38
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.35
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.34
KOG1210|consensus	331		94.33
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	94.32
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.26
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	94.26
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.21
PLN02695	370	GDP-D-mannose-3',5'-epimerase	94.2
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	94.19
PRK06101	240	short chain dehydrogenase; Provisional	94.18
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	94.17
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.13
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.12
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.09
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.08
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.06
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.06
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.05
PRK07102	243	short chain dehydrogenase; Provisional	94.05
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	94.01
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	94.01
PLN02240	352	UDP-glucose 4-epimerase	93.93
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	93.89
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	93.89
PRK12548	289	shikimate 5-dehydrogenase; Provisional	93.87
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	93.87
PRK12824	245	acetoacetyl-CoA reductase; Provisional	93.86
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	93.86
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	93.84
PRK05599	246	hypothetical protein; Provisional	93.83
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	93.82
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	93.82
PRK07578	199	short chain dehydrogenase; Provisional	93.79
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	93.79
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	93.79
PLN02896	353	cinnamyl-alcohol dehydrogenase	93.78
PRK05855	582	short chain dehydrogenase; Validated	93.76
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	93.74
PRK12746	254	short chain dehydrogenase; Provisional	93.73
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	93.72
TIGR02415	254	23BDH acetoin reductases. One member of this famil	93.71
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	93.7
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	93.6
PRK12744	257	short chain dehydrogenase; Provisional	93.59
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.58
PRK12827	249	short chain dehydrogenase; Provisional	93.56
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	93.54
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	93.5
PLN00198	338	anthocyanidin reductase; Provisional	93.41
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	93.41
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.41
PRK09009	235	C factor cell-cell signaling protein; Provisional	93.39
PRK11579	346	putative oxidoreductase; Provisional	93.35
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	93.33
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.31
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	93.25
PRK06947	248	glucose-1-dehydrogenase; Provisional	93.24
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	93.22
PRK06940	275	short chain dehydrogenase; Provisional	93.21
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	93.21
PLN02214	342	cinnamoyl-CoA reductase	93.21
PRK08219	227	short chain dehydrogenase; Provisional	93.2
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	93.19
KOG1014|consensus	312		93.19
KOG1209|consensus	289		93.15
PRK14982	340	acyl-ACP reductase; Provisional	93.14
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	93.09
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	93.05
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.01
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.01
PRK07201	657	short chain dehydrogenase; Provisional	93.0
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	92.99
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	92.99
PLN02572	442	UDP-sulfoquinovose synthase	92.98
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	92.98
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.98
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	92.97
PRK07069	251	short chain dehydrogenase; Validated	92.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	92.89
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	92.87
PRK07041	230	short chain dehydrogenase; Provisional	92.82
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	92.8
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	92.78
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	92.78
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	92.77
COG1028	251	FabG Dehydrogenases with different specificities (	92.73
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	92.69
PLN00016	378	RNA-binding protein; Provisional	92.69
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	92.63
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	92.61
KOG1502|consensus	327		92.61
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	92.6
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	92.59
PLN02928	347	oxidoreductase family protein	92.57
PLN02686	367	cinnamoyl-CoA reductase	92.55
PLN00015	308	protochlorophyllide reductase	92.55
PRK06123	248	short chain dehydrogenase; Provisional	92.49
PRK13243	333	glyoxylate reductase; Reviewed	92.48
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	92.45
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.44
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.38
PLN02583	297	cinnamoyl-CoA reductase	92.32
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.31
KOG1610|consensus	322		92.24
PLN02427	386	UDP-apiose/xylose synthase	92.19
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	92.13
PLN02260	668	probable rhamnose biosynthetic enzyme	91.95
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	91.95
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	91.94
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	91.81
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.81
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	91.8
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.77
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	91.76
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.75
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	91.7
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.68
KOG4169|consensus	261		91.64
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.62
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	91.58
PLN00203	519	glutamyl-tRNA reductase	91.48
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	91.43
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.37
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.24
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	91.22
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	91.21
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.2
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	91.1
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	91.02
PRK07340	304	ornithine cyclodeaminase; Validated	90.97
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	90.94
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.91
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	90.88
PLN02650	351	dihydroflavonol-4-reductase	90.86
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.85
PRK06719	157	precorrin-2 dehydrogenase; Validated	90.84
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	90.84
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.77
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	90.76
PRK08300	302	acetaldehyde dehydrogenase; Validated	90.74
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	90.73
PF13478	136	XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2	90.72
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	90.7
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	90.61
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	90.5
PLN02166	436	dTDP-glucose 4,6-dehydratase	90.5
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	90.5
PLN02206	442	UDP-glucuronate decarboxylase	90.49
PRK07574	385	formate dehydrogenase; Provisional	90.49
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	90.46
PLN03075	296	nicotianamine synthase; Provisional	90.42
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.36
PLN02778	298	3,5-epimerase/4-reductase	90.33
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	90.29
KOG1252|consensus	362		90.22
PF03853	169	YjeF_N: YjeF-related protein N-terminus; InterPro:	90.16
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	90.0
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	89.99
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.98

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=6.2e-56  Score=399.62  Aligned_cols=311  Identities=27%  Similarity=0.408  Sum_probs=265.5

Q ss_pred             ccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          24 STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      +++|||+++.++++|  ++++ +++.|+|+++||+|+|+|+|||++|++.++|..                ....+|+++
T Consensus         1 ~~~mkA~~~~~~~~p--l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~----------------~~~~~P~ip   61 (339)
T COG1064           1 MMTMKAAVLKKFGQP--LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDW----------------PVPKLPLIP   61 (339)
T ss_pred             CcceEEEEEccCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCC----------------CCCCCCccC
Confidence            468999999999988  7888 899999999999999999999999999999982                334599999


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEE-e----------e--------------cCCCCCCceEEEeecCcccccCCCCCC
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYG-V----------I--------------QPHKQGSFSKLILADSALVHKKPSNIS  158 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~-~----------~--------------~~~~~g~~a~~~~v~~~~~~~ip~~~~  158 (383)
                      |||.+|+|+++|++|++|++||||.. +          |              +.+.+|+||||+++++++++++|++++
T Consensus        62 GHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d  141 (339)
T COG1064          62 GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLD  141 (339)
T ss_pred             CcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCC
Confidence            99999999999999999999999965 2          1              124579999999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeee
Q psy9949         159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVI  237 (383)
Q Consensus       159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~  237 (383)
                      +++||++.|++.|+|++|+ ..++    ++|++|+|.| .|++|++++|+|+++|++|++++++ +++++++++|++.++
T Consensus       142 ~~~aApllCaGiT~y~alk-~~~~----~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i  215 (339)
T COG1064         142 LAEAAPLLCAGITTYRALK-KANV----KPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVI  215 (339)
T ss_pred             hhhhhhhhcCeeeEeeehh-hcCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEE
Confidence            9999999999999999998 5888    9999999999 7899999999999999999999966 567899999999999


Q ss_pred             eCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949         238 DYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES  317 (383)
Q Consensus       238 ~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (383)
                      +.++.++.+.+.+.  +|+++|+++ +...... ++.++  ++|+++++|.+..          .. ...++..      
T Consensus       216 ~~~~~~~~~~~~~~--~d~ii~tv~-~~~~~~~-l~~l~--~~G~~v~vG~~~~----------~~-~~~~~~~------  272 (339)
T COG1064         216 NSSDSDALEAVKEI--ADAIIDTVG-PATLEPS-LKALR--RGGTLVLVGLPGG----------GP-IPLLPAF------  272 (339)
T ss_pred             EcCCchhhHHhHhh--CcEEEECCC-hhhHHHH-HHHHh--cCCEEEEECCCCC----------cc-cCCCCHH------
Confidence            98777777777654  999999999 5544443 99999  9999999965420          00 0001111      


Q ss_pred             ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .+.+++..+ .++...++.++++++++..+|++++.+.+.++++++++|++.|.+++..||+||++
T Consensus       273 ~li~~~~~i-~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         273 LLILKEISI-VGSLVGTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             HhhhcCeEE-EEEecCCHHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence            123333343 35666789999999999999999999978999999999999999999999999975

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.9e-50  Score=373.10  Aligned_cols=321  Identities=30%  Similarity=0.416  Sum_probs=262.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+++++.+.++++.++++ ++|.|+|++|||||||.++|||+.|+...+|..               .....+|+++|.|
T Consensus         1 mka~~~~~~g~~~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~---------------~~~~~~P~i~G~d   64 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA---------------PPVRPLPFIPGSE   64 (326)
T ss_pred             CeEEEEeccCCCceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC---------------CCCCCCCCcccce
Confidence            789999999999889999 899999999999999999999999999998851               2345689999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|++|++|++||||+.+.....+|+|+||+++|++.++++|+++|+++||+++++++|||++|....++    
T Consensus        65 ~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l----  140 (326)
T COG0604          65 AAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL----  140 (326)
T ss_pred             eEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence            9999999999999999999999985111369999999999999999999999999999999999999999988888    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g  262 (383)
                      +++++|||+||+|++|.+++|+||++|+.+++++ ++++.++++++|++++++|.+.++.+++++.   .++|+|||++|
T Consensus       141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            9999999999999999999999999997655555 6666779999999999999999999998764   37999999999


Q ss_pred             CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHH
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEIN  342 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (383)
                      +.....+  +++++  ++|+++.++....  ..      ....+...+...    ....++............+.++++.
T Consensus       221 ~~~~~~~--l~~l~--~~G~lv~ig~~~g--~~------~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~l~  284 (326)
T COG0604         221 GDTFAAS--LAALA--PGGRLVSIGALSG--GP------PVPLNLLPLLGK----RLTLRGVTLGSRDPEALAEALAELF  284 (326)
T ss_pred             HHHHHHH--HHHhc--cCCEEEEEecCCC--CC------ccccCHHHHhhc----cEEEEEecceecchHHHHHHHHHHH
Confidence            9988777  99999  9999999965321  00      000001111111    1122222111000022367889999


Q ss_pred             HHHHcCCcccccceeecCCCHHHHHHHHhc-CCCCCeEEEeC
Q psy9949         343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQ-GHLRGKIILNA  383 (383)
Q Consensus       343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~-~~~~gkvvl~~  383 (383)
                      +++++|++++.+..+|||++..++...... ++..||+||++
T Consensus       285 ~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         285 DLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            999999999999999999996555555443 48889999975

>KOG0023|consensus

Probab=100.00  E-value=1.6e-47  Score=333.49  Aligned_cols=315  Identities=24%  Similarity=0.353  Sum_probs=256.5

Q ss_pred             CCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          20 HLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        20 ~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      ++..|.++++|.+..++++..+++. ++++|+++++||+|+++|+|||++|++.+.|..                ...++
T Consensus         3 ~~~~p~k~~g~~~~~~~G~l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdw----------------g~s~~   65 (360)
T KOG0023|consen    3 SMSIPEKQFGWAARDPSGVLSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDW----------------GLSKY   65 (360)
T ss_pred             cccCchhhEEEEEECCCCCCCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccC----------------CcccC
Confidence            4667899999999999887667778 899999999999999999999999999999872                23678


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEE-------------------eec--------C-----CCCCCceEEEeecC
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYG-------------------VIQ--------P-----HKQGSFSKLILADS  147 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~-------------------~~~--------~-----~~~g~~a~~~~v~~  147 (383)
                      |.++|||.+|+|+++|++|++|++||||-.                   +|+        .     .+.|+|++|+++++
T Consensus        66 PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~  145 (360)
T KOG0023|consen   66 PLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDE  145 (360)
T ss_pred             CccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEee
Confidence            999999999999999999999999999931                   111        1     23467999999999


Q ss_pred             cccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--chH
Q psy9949         148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG--DAK  225 (383)
Q Consensus       148 ~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~--~~~  225 (383)
                      .++++||++++.+.||++.|++.|+|..|. ..++    .+|+++.|.| +|++|++++|+||++|.+|++++++  +++
T Consensus       146 ~~a~kIP~~~pl~~aAPlLCaGITvYspLk-~~g~----~pG~~vgI~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kke  219 (360)
T KOG0023|consen  146 VFAIKIPENLPLASAAPLLCAGITVYSPLK-RSGL----GPGKWVGIVG-LGGLGHMAVQYAKAMGMRVTVISTSSKKKE  219 (360)
T ss_pred             eeEEECCCCCChhhccchhhcceEEeehhH-HcCC----CCCcEEEEec-CcccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence            999999999999999999999999999998 6777    8999999999 5669999999999999999999966  456


Q ss_pred             HHHHhcCCCeeeeCC-ChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchh
Q psy9949         226 DLVTSLNPNLVIDYN-EPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG  302 (383)
Q Consensus       226 ~~~~~lg~~~v~~~~-~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~  302 (383)
                      +..+.||++..++.. ++++.+++.+.  +++|-+.+.  ....... ++++++  .+|++|.+|.|..           
T Consensus       220 ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~-~~~~lk--~~Gt~V~vg~p~~-----------  283 (360)
T KOG0023|consen  220 EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL--AEHALEP-LLGLLK--VNGTLVLVGLPEK-----------  283 (360)
T ss_pred             HHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeec--cccchHH-HHHHhh--cCCEEEEEeCcCC-----------
Confidence            777889999988877 78888877653  345666555  3332222 288999  9999999965421           


Q ss_pred             hhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         303 LVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                        +..++....      .+. ....-++.-.++.+.+++++++++|.+++.+. ..+++++++||++|++++..+|.|++
T Consensus       284 --~~~~~~~~l------il~-~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD  353 (360)
T KOG0023|consen  284 --PLKLDTFPL------ILG-RKSIKGSIVGSRKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVD  353 (360)
T ss_pred             --cccccchhh------hcc-cEEEEeeccccHHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEE
Confidence              111111111      111 12223445567999999999999999988876 78999999999999999999999987


Q ss_pred             C
Q psy9949         383 A  383 (383)
Q Consensus       383 ~  383 (383)
                      +
T Consensus       354 ~  354 (360)
T KOG0023|consen  354 V  354 (360)
T ss_pred             c
Confidence            4

>KOG1197|consensus

Probab=100.00  E-value=7.4e-47  Score=317.95  Aligned_cols=319  Identities=24%  Similarity=0.338  Sum_probs=273.0

Q ss_pred             CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      ..|+..+.+++++.|..+.++++ +.|.|+|.|+|++||-.|+|+|..|....+|.                +...++|+
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGl----------------Y~~~plPy   66 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGL----------------YDPAPLPY   66 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccc----------------cCCCCCCc
Confidence            45778899999999999999999 99999999999999999999999999999997                34578899


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA  181 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~  181 (383)
                      +||-|.+|+|+++|++|+++++||||+.+.+   .|.|+|++.+|...++++|+.+++++||++.+.++|||.-+.+..+
T Consensus        67 tpGmEaaGvVvAvG~gvtdrkvGDrVayl~~---~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~  143 (336)
T KOG1197|consen   67 TPGMEAAGVVVAVGEGVTDRKVGDRVAYLNP---FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYN  143 (336)
T ss_pred             CCCcccceEEEEecCCccccccccEEEEecc---chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999998874   6999999999999999999999999999999999999999999999


Q ss_pred             cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEE
Q psy9949         182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVI  257 (383)
Q Consensus       182 ~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v  257 (383)
                      +    ++|++||+|.|+|++|++++|++++.|+.+|++++. ++++.+++.|+.+.++++.+++.+++.+.   .|+|++
T Consensus       144 v----kpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~v  219 (336)
T KOG1197|consen  144 V----KPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAV  219 (336)
T ss_pred             C----CCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceee
Confidence            9    999999999999999999999999999999999965 57789999999999999999999988864   489999


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHH-
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPY-  336 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  336 (383)
                      +|.+|......+  +.+|+  +.|.+|.+|..       .|+......+.++.....+     .+.+.  +++.....+ 
T Consensus       220 yDsvG~dt~~~s--l~~Lk--~~G~mVSfG~a-------sgl~~p~~l~~ls~k~l~l-----vrpsl--~gYi~g~~el  281 (336)
T KOG1197|consen  220 YDSVGKDTFAKS--LAALK--PMGKMVSFGNA-------SGLIDPIPLNQLSPKALQL-----VRPSL--LGYIDGEVEL  281 (336)
T ss_pred             eccccchhhHHH--HHHhc--cCceEEEeccc-------cCCCCCeehhhcChhhhhh-----ccHhh--hcccCCHHHH
Confidence            999999998888  99999  99999999742       1222122222222222111     11111  233332222 


Q ss_pred             --HHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         337 --AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       337 --~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                        ...+++.++-+|.+++.+.++|||+++.+|+.++++.+..||++|.
T Consensus       282 ~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  282 VSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             HHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEe
Confidence              3466777788999999999999999999999999999999999985

>KOG0024|consensus

Probab=100.00  E-value=3.3e-47  Score=332.45  Aligned_cols=311  Identities=23%  Similarity=0.293  Sum_probs=249.6

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      ..|+|+++.++++   ++++ +.|.|++ .|+||+|++.++|||+||+|.+......             ....+.|+++
T Consensus         3 ~~~~A~vl~g~~d---i~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig-------------~~v~k~Pmvl   65 (354)
T KOG0024|consen    3 ADNLALVLRGKGD---IRIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIG-------------DFVVKKPMVL   65 (354)
T ss_pred             cccceeEEEccCc---eeEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcC-------------cccccccccc
Confidence            4799999999776   6899 8999988 7999999999999999999999764110             1224679999


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEe-------------------------ecCCCCCCceEEEeecCcccccCCCCCC
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGV-------------------------IQPHKQGSFSKLILADSALVHKKPSNIS  158 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~-------------------------~~~~~~g~~a~~~~v~~~~~~~ip~~~~  158 (383)
                      |||.+|+|.++|++|+++++||||+.-                         ..+..+|++++|++.+++.|+|+|+++|
T Consensus        66 GHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs  145 (354)
T KOG0024|consen   66 GHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVS  145 (354)
T ss_pred             ccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCc
Confidence            999999999999999999999999632                         1245679999999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe-cCchHHHHHhcCCCee
Q psy9949         159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC-SGDAKDLVTSLNPNLV  236 (383)
Q Consensus       159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~-~~~~~~~~~~lg~~~v  236 (383)
                      ++++|++.+ ++++||+.+ ++++    ++|.+|||+| +|++|+.+...||++|| +|+.++ ...|+++++++|++.+
T Consensus       146 ~eeGAl~eP-LsV~~HAcr-~~~v----k~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~  218 (354)
T KOG0024|consen  146 FEEGALIEP-LSVGVHACR-RAGV----KKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT  218 (354)
T ss_pred             hhhcccccc-hhhhhhhhh-hcCc----ccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence            999999975 788999998 8999    9999999999 99999999999999999 888887 6678999999999987


Q ss_pred             eeCCC----hHHHHHHhcCC---CccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949         237 IDYNE----PEAMHSIAGAG---PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD  309 (383)
Q Consensus       237 ~~~~~----~~~~~~i~~~~---g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  309 (383)
                      .+...    ..+.+.+...-   .+|+.|||+|.......+ +.+++  .+|++++.+.             +....++.
T Consensus       219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aa-i~a~r--~gGt~vlvg~-------------g~~~~~fp  282 (354)
T KOG0024|consen  219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAA-IKATR--SGGTVVLVGM-------------GAEEIQFP  282 (354)
T ss_pred             eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHH-HHHhc--cCCEEEEecc-------------CCCccccC
Confidence            65544    23334444332   499999999998887766 88888  9999888742             11111222


Q ss_pred             HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCCC-CeEEEe
Q psy9949         310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHLR-GKIILN  382 (383)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~~-gkvvl~  382 (383)
                      +....+ ++..++      +.+++...++..+++++++|++  ++++++.|+++++.+||+.+.+++.. -|++|.
T Consensus       283 i~~v~~-kE~~~~------g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  283 IIDVAL-KEVDLR------GSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             hhhhhh-heeeee------eeeeeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence            221111 222222      4455566799999999999987  56899999999999999999887753 377775

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=7.6e-47  Score=333.12  Aligned_cols=314  Identities=20%  Similarity=0.238  Sum_probs=261.7

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      +.++|.++.++++|  |+++ ++.+++|++|||+||+.++|+|++|..+.+|..                + ..+|.++|
T Consensus         1 mk~~aAV~~~~~~P--l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~----------------p-~~~P~vLG   60 (366)
T COG1062           1 MKTRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDD----------------P-EGFPAVLG   60 (366)
T ss_pred             CCceEeeeecCCCC--eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCC----------------C-CCCceecc
Confidence            35789999998988  8899 899999999999999999999999999999972                2 34999999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeec-------------------------------------------CCCC--CCc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------------------------PHKQ--GSF  139 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------------------------~~~~--g~~  139 (383)
                      ||++|+|++||++|+++++||+|+....                                           .+.-  ++|
T Consensus        61 HEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stF  140 (366)
T COG1062          61 HEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTF  140 (366)
T ss_pred             cccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccc
Confidence            9999999999999999999999974211                                           0112  499


Q ss_pred             eEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEE
Q psy9949         140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVT  218 (383)
Q Consensus       140 a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~  218 (383)
                      ++|.++++..++++++..+++.++++.|...|.+.++.+.+++    ++|++|.|+| .|++|+++||-|+..|+ ++|+
T Consensus       141 a~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v----~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiA  215 (366)
T COG1062         141 AEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKV----EPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIA  215 (366)
T ss_pred             hhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccC----CCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEE
Confidence            9999999999999999999999999999999999999999999    9999999999 99999999999999999 9999


Q ss_pred             Ee-cCchHHHHHhcCCCeeeeCCCh-HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCC
Q psy9949         219 TC-SGDAKDLVTSLNPNLVIDYNEP-EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNT  294 (383)
Q Consensus       219 ~~-~~~~~~~~~~lg~~~v~~~~~~-~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~  294 (383)
                      ++ .++++++++++|+++++|.++. +..+.+.+.  +|+|++|||+|+.....++ +++..  ++|+.+.+|-+.... 
T Consensus       216 vD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~a-l~~~~--~~G~~v~iGv~~~~~-  291 (366)
T COG1062         216 VDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQA-LEATH--RGGTSVIIGVAGAGQ-  291 (366)
T ss_pred             EeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHH-HHHHh--cCCeEEEEecCCCCc-
Confidence            99 5678899999999999999887 577777664  4899999999999887776 88999  899999987532221 


Q ss_pred             CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc
Q psy9949         295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ  372 (383)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~  372 (383)
                             ....+.+++..     ...|+|+.+  +.. .-+.++..++++..+|+|.  .++++.++|+|++|||+.|.+
T Consensus       292 -------~i~~~~~~lv~-----gr~~~Gs~~--G~~-~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~  356 (366)
T COG1062         292 -------EISTRPFQLVT-----GRVWKGSAF--GGA-RPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHE  356 (366)
T ss_pred             -------eeecChHHeec-----cceEEEEee--cCC-ccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhC
Confidence                   11122222222     234444332  111 2367899999999999874  589999999999999999999


Q ss_pred             CCCCCeEEEeC
Q psy9949         373 GHLRGKIILNA  383 (383)
Q Consensus       373 ~~~~gkvvl~~  383 (383)
                      ++.. |-||.+
T Consensus       357 G~~I-R~Vi~~  366 (366)
T COG1062         357 GKSI-RSVIRF  366 (366)
T ss_pred             Ccee-eEEecC
Confidence            9987 666654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.1e-43  Score=337.44  Aligned_cols=313  Identities=21%  Similarity=0.236  Sum_probs=250.1

Q ss_pred             eeeEEEeecCC------CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          27 TAAWQISSYGG------ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        27 ~~a~~~~~~g~------~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      |||+++.++|.      ++.++++ +.+.|+|+++||+|||.++|||++|++.+.|..                 ...+|
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~-----------------~~~~p   62 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR-----------------PRPLP   62 (371)
T ss_pred             CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCC-----------------CCCCC
Confidence            79999999876      3678898 899999999999999999999999999988751                 13468


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CC
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HK  135 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~  135 (383)
                      .++|||++|+|+++|+++++|++||||++....                                             ..
T Consensus        63 ~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g  142 (371)
T cd08281          63 MALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLG  142 (371)
T ss_pred             ccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccC
Confidence            999999999999999999999999999863110                                             00


Q ss_pred             CCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Q psy9949         136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-  214 (383)
Q Consensus       136 ~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-  214 (383)
                      .|+|+||++++.+.++++|+++++++|+.++++++|||+++...+++    +++++|+|+| +|++|++++|+|+.+|+ 
T Consensus       143 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i----~~g~~VlV~G-~G~vG~~a~~lak~~G~~  217 (371)
T cd08281         143 VSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV----RPGQSVAVVG-LGGVGLSALLGAVAAGAS  217 (371)
T ss_pred             cccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCC
Confidence            27999999999999999999999999999999999999998777888    9999999998 79999999999999999 


Q ss_pred             EEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCc
Q psy9949         215 EVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFL  291 (383)
Q Consensus       215 ~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~  291 (383)
                      +|++++++ ++.++++++|++.++++.+.++.+++.+.  +++|++|||+|+......+ +++++  ++|+++.+|....
T Consensus       218 ~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~~  294 (371)
T cd08281         218 QVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETA-YEITR--RGGTTVTAGLPDP  294 (371)
T ss_pred             cEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHHHh--cCCEEEEEccCCC
Confidence            69888854 56788999999999998887777777643  3799999999986554443 88999  9999999864311


Q ss_pred             cCCCCCCCchhhhhhHHHHhhhhh-ccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHH
Q psy9949         292 KNTDSLGLVPGLVKNAFDLLKSNF-ESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFE  368 (383)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~  368 (383)
                      ..             .+.+....+ .++..+.|...   ......++++++++++++|+++.  +++++|+|+++++||+
T Consensus       295 ~~-------------~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~  358 (371)
T cd08281         295 EA-------------RLSVPALSLVAEERTLKGSYM---GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFD  358 (371)
T ss_pred             Cc-------------eeeecHHHHhhcCCEEEEEec---CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence            00             001111111 11222222110   00112578899999999999864  6789999999999999


Q ss_pred             HHhcCCCCCeEEE
Q psy9949         369 KVQQGHLRGKIIL  381 (383)
Q Consensus       369 ~l~~~~~~gkvvl  381 (383)
                      .+.+++..||+|+
T Consensus       359 ~~~~~~~~~~vi~  371 (371)
T cd08281         359 RLAAGEAVRQVIL  371 (371)
T ss_pred             HHhCCCceeeeeC
Confidence            9999998877764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0022|consensus

Probab=100.00  E-value=5.8e-45  Score=315.90  Aligned_cols=317  Identities=19%  Similarity=0.183  Sum_probs=261.9

Q ss_pred             CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      ..+.++||++..+++.|  |.++ ++.+++|+.+||+||+.++++|++|.+.+.|..                +...+|.
T Consensus         3 gkvI~CKAAV~w~a~~P--L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~----------------~~~~fP~   63 (375)
T KOG0022|consen    3 GKVITCKAAVAWEAGKP--LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD----------------PEGLFPV   63 (375)
T ss_pred             CCceEEeEeeeccCCCC--eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCC----------------ccccCce
Confidence            34678999999999988  8899 899999999999999999999999999999872                3467899


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeec--------------------------------------------CCCC-
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ--------------------------------------------PHKQ-  136 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~--------------------------------------------~~~~-  136 (383)
                      ++|||++|+|+++|++|+++++||+|+.+..                                            .+.. 
T Consensus        64 IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg  143 (375)
T KOG0022|consen   64 ILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMG  143 (375)
T ss_pred             EecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecc
Confidence            9999999999999999999999999974311                                            0112 


Q ss_pred             -CCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Q psy9949         137 -GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-  214 (383)
Q Consensus       137 -g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-  214 (383)
                       .+|+||.+++...++++++..+++.++.+.|...|+|.+..+.+++    ++|++|.|+| -|++|+++++-||+.|| 
T Consensus       144 ~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv----~~GstvAVfG-LG~VGLav~~Gaka~GAs  218 (375)
T KOG0022|consen  144 TSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKV----EPGSTVAVFG-LGGVGLAVAMGAKAAGAS  218 (375)
T ss_pred             cccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhccc----CCCCEEEEEe-cchHHHHHHHhHHhcCcc
Confidence             3999999999999999999999999999999999999999999999    9999999999 99999999999999999 


Q ss_pred             EEEEEe-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         215 EVVTTC-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       215 ~Vi~~~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ++|+++ .+++++.++++|++.++|+.+  ....+.+.+.  +|+|+-|||+|......+++..+-.  -.|+-|.+|-.
T Consensus       219 rIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~--GwG~sv~iGv~  296 (375)
T KOG0022|consen  219 RIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHK--GWGKSVVIGVA  296 (375)
T ss_pred             cEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhc--CCCeEEEEEec
Confidence            999999 677899999999999998874  2355666664  6899999999999988877334444  44888888642


Q ss_pred             CccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcC--CHHHHHHHHHHHHcCCc--ccccceeecCCCHHH
Q psy9949         290 FLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP--IPYAVKEINKFIERGQI--KPVIDSKYNFCELPT  365 (383)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~  365 (383)
                      ...             ..+++...++.+...|+|.     .+..  .++++..+++...++++  ...++|++||+++++
T Consensus       297 ~~~-------------~~i~~~p~~l~~GR~~~Gs-----~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~  358 (375)
T KOG0022|consen  297 AAG-------------QEISTRPFQLVTGRTWKGS-----AFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINK  358 (375)
T ss_pred             CCC-------------cccccchhhhccccEEEEE-----ecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHH
Confidence            111             1223333333224444443     3332  47788889988888876  568999999999999


Q ss_pred             HHHHHhcCCCCCeEEEeC
Q psy9949         366 AFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       366 a~~~l~~~~~~gkvvl~~  383 (383)
                      ||++|.+++.. |-||.|
T Consensus       359 AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  359 AFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             HHHHHhCCceE-EEEEeC
Confidence            99999999987 888765

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=2.5e-43  Score=332.95  Aligned_cols=315  Identities=20%  Similarity=0.289  Sum_probs=244.8

Q ss_pred             ccCCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949          18 INHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL   97 (383)
Q Consensus        18 ~~~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~   97 (383)
                      ++...-|+.++++......+  .+.+. +++.|+++++||+|||.++|||++|++.+.|..                ...
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~--~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~----------------~~~   64 (360)
T PLN02586          4 SPEEEHPQKAFGWAARDPSG--VLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEW----------------GFT   64 (360)
T ss_pred             ChhhhchhheeEEEecCCCC--CceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCc----------------CCC
Confidence            45555677788888765543  46777 788999999999999999999999999887751                123


Q ss_pred             CCCccccCceeEEEEecCCCCCCCCCCCEEEEe-----ec---------------------------CCCCCCceEEEee
Q psy9949          98 EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV-----IQ---------------------------PHKQGSFSKLILA  145 (383)
Q Consensus        98 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~---------------------------~~~~g~~a~~~~v  145 (383)
                      .+|.++|||++|+|+++|+++++|++||||+..     |+                           ...+|+|+||+++
T Consensus        65 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v  144 (360)
T PLN02586         65 RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVV  144 (360)
T ss_pred             CCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEE
Confidence            468899999999999999999999999999742     11                           1125999999999


Q ss_pred             cCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch
Q psy9949         146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA  224 (383)
Q Consensus       146 ~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~  224 (383)
                      |.+.++++|+++++++++++++++.|||+++.....+    +++++|+|.| +|++|++++|+|+.+|++|++++.+ ++
T Consensus       145 ~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~----~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~  219 (360)
T PLN02586        145 DQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMT----EPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNK  219 (360)
T ss_pred             chHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhccc----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            9999999999999999999999999999999766666    7999999987 7999999999999999998888744 33


Q ss_pred             -HHHHHhcCCCeeeeCCChHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchh
Q psy9949         225 -KDLVTSLNPNLVIDYNEPEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG  302 (383)
Q Consensus       225 -~~~~~~lg~~~v~~~~~~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~  302 (383)
                       .+.++++|++.++++.+.+   .+.+. +++|++||++|.......+ +++++  ++|+++.+|...           +
T Consensus       220 ~~~~~~~~Ga~~vi~~~~~~---~~~~~~~~~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~vG~~~-----------~  282 (360)
T PLN02586        220 EDEAINRLGADSFLVSTDPE---KMKAAIGTMDYIIDTVSAVHALGPL-LGLLK--VNGKLITLGLPE-----------K  282 (360)
T ss_pred             hhhHHHhCCCcEEEcCCCHH---HHHhhcCCCCEEEECCCCHHHHHHH-HHHhc--CCcEEEEeCCCC-----------C
Confidence             4566889999998876532   23222 4799999999976543333 88999  999999986421           0


Q ss_pred             hhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         303 LVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ..  .+++..  +    ..+... ..+....+.++++++++++++|++++.+ ++|+|+++++||+.+.+++..||+||+
T Consensus       283 ~~--~~~~~~--~----~~~~~~-i~g~~~~~~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~  352 (360)
T PLN02586        283 PL--ELPIFP--L----VLGRKL-VGGSDIGGIKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVID  352 (360)
T ss_pred             CC--ccCHHH--H----HhCCeE-EEEcCcCCHHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEE
Confidence            00  011111  1    111111 1233334567899999999999998766 589999999999999999988999987


Q ss_pred             C
Q psy9949         383 A  383 (383)
Q Consensus       383 ~  383 (383)
                      +
T Consensus       353 ~  353 (360)
T PLN02586        353 V  353 (360)
T ss_pred             c
Confidence            4

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1e-42  Score=329.17  Aligned_cols=313  Identities=18%  Similarity=0.204  Sum_probs=248.1

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      +||++++.+++++  ++++ +.+.|+|+++||+|||.++|||++|++...|.                 ....+|.++||
T Consensus         1 ~mka~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~-----------------~~~~~p~i~G~   60 (358)
T TIGR03451         1 TVRGVIARSKGAP--VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGG-----------------INDEFPFLLGH   60 (358)
T ss_pred             CcEEEEEccCCCC--CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCC-----------------ccccCCccccc
Confidence            6999999998876  6778 89999999999999999999999999988875                 11346889999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeec------------------C-------------------CCCCCceEEEeecCc
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------P-------------------HKQGSFSKLILADSA  148 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------~-------------------~~~g~~a~~~~v~~~  148 (383)
                      |++|+|+++|+++++|++||||++...                  .                   ..+|+|+||+.++.+
T Consensus        61 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~  140 (358)
T TIGR03451        61 EAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAG  140 (358)
T ss_pred             ceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehh
Confidence            999999999999999999999986210                  0                   124899999999999


Q ss_pred             ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHH
Q psy9949         149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKD  226 (383)
Q Consensus       149 ~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~  226 (383)
                      .++++|+++++++|+.+++.+.|||+++...+++    +++++|+|+| +|++|++++|+|+.+|+ +|++++++ ++.+
T Consensus       141 ~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~  215 (358)
T TIGR03451       141 QCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGV----KRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLE  215 (358)
T ss_pred             heEECCCCCChhHhhhhcccchhhHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            9999999999999999999999999988777788    9999999998 69999999999999999 58888754 5778


Q ss_pred             HHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhh
Q psy9949         227 LVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGL  303 (383)
Q Consensus       227 ~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~  303 (383)
                      +++++|++.++++.+.++.+.+.+.   .++|++|||+|++.....+ +++++  ++|+++.+|.+....        ..
T Consensus       216 ~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~-~~~~~--~~G~iv~~G~~~~~~--------~~  284 (358)
T TIGR03451       216 WAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQA-FYARD--LAGTVVLVGVPTPDM--------TL  284 (358)
T ss_pred             HHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhc--cCCEEEEECCCCCCc--------ee
Confidence            8999999999998877777666543   4799999999986554443 88889  999999986431100        00


Q ss_pred             hhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         304 VKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      ......+..    ++..+++..   .......++++++++++++|++++  +++++||++++++|++.+.+++.. |+++
T Consensus       285 ~~~~~~~~~----~~~~i~~~~---~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  356 (358)
T TIGR03451       285 ELPLLDVFG----RGGALKSSW---YGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVV  356 (358)
T ss_pred             eccHHHHhh----cCCEEEEee---cCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEE
Confidence            000011111    122222211   001123678999999999999865  679999999999999999888775 7777


Q ss_pred             e
Q psy9949         382 N  382 (383)
Q Consensus       382 ~  382 (383)
                      .
T Consensus       357 ~  357 (358)
T TIGR03451       357 E  357 (358)
T ss_pred             e
Confidence            5

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.2e-42  Score=329.36  Aligned_cols=319  Identities=17%  Similarity=0.145  Sum_probs=249.9

Q ss_pred             CCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          20 HLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        20 ~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      ++..|.+||++++.+++++  +.++ +.+.|+|+++||+|||.++|||++|++.+.|..+               ....+
T Consensus         4 ~~~~~~~mka~~~~~~~~~--~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~---------------~~~~~   65 (381)
T PLN02740          4 TQGKVITCKAAVAWGPGEP--LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE---------------AQRAY   65 (381)
T ss_pred             ccccceeeEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc---------------ccCCC
Confidence            3446778999999987754  6777 8999999999999999999999999999887511               12356


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEeecC----------------------------------------------
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP----------------------------------------------  133 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------  133 (383)
                      |.++|||++|+|+++|+++++|++||||++....                                              
T Consensus        66 p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  145 (381)
T PLN02740         66 PRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIY  145 (381)
T ss_pred             CccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCccc
Confidence            8999999999999999999999999999864210                                              


Q ss_pred             --CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHH
Q psy9949         134 --HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA  211 (383)
Q Consensus       134 --~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~  211 (383)
                        ..+|+|+||++++.+.++++|+++++++++.+++++.|||+++...+++    +++++|+|+| +|++|++++|+|+.
T Consensus       146 ~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~G~vG~~a~q~ak~  220 (381)
T PLN02740        146 HFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANV----QAGSSVAIFG-LGAVGLAVAEGARA  220 (381)
T ss_pred             ccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHH
Confidence              0158999999999999999999999999999999999999998767888    9999999998 69999999999999


Q ss_pred             CCC-EEEEEec-CchHHHHHhcCCCeeeeCCCh--HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEE
Q psy9949         212 WDI-EVVTTCS-GDAKDLVTSLNPNLVIDYNEP--EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFV  284 (383)
Q Consensus       212 ~G~-~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~--~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v  284 (383)
                      +|+ +|+++++ +++.++++++|++.++++.+.  ++.+++.+.  +++|++||++|++.....+ +++++  ++ |+++
T Consensus       221 ~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a-~~~~~--~g~G~~v  297 (381)
T PLN02740        221 RGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREA-FLSTH--DGWGLTV  297 (381)
T ss_pred             CCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHhhh--cCCCEEE
Confidence            999 6998884 467889999999999887753  366655542  3799999999987654443 78888  86 9999


Q ss_pred             EecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHHHHHHHcCCccc--ccceeecC
Q psy9949         285 TLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEINKFIERGQIKP--VIDSKYNF  360 (383)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~--~~~~~~~l  360 (383)
                      .+|.+...           .  .+.+....+     .++..+......  ....++.++++++.+|+++.  +++++|+|
T Consensus       298 ~~G~~~~~-----------~--~~~~~~~~~-----~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l  359 (381)
T PLN02740        298 LLGIHPTP-----------K--MLPLHPMEL-----FDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF  359 (381)
T ss_pred             EEccCCCC-----------c--eecccHHHH-----hcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH
Confidence            98643100           0  011111111     111222111111  12467899999999998754  67899999


Q ss_pred             CCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         361 CELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       361 ~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++++|++.+.+++. .|++|++
T Consensus       360 ~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        360 EKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             HHHHHHHHHHHCCCc-eeEEEeC
Confidence            999999999988876 4999874

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-42  Score=322.93  Aligned_cols=306  Identities=20%  Similarity=0.278  Sum_probs=235.4

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhc-cCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLG-GYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      .++++++..+++   ++++ +.+.| ++++||||||.++|||++|++++. |..+              .....+|.++|
T Consensus         4 ~~~~~~~~~~~~---~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~--------------~~~~~~p~v~G   64 (343)
T PRK09880          4 KTQSCVVAGKKD---VAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVG--------------NFVIKAPMVLG   64 (343)
T ss_pred             cceEEEEecCCc---eEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcc--------------cccccCCcccC
Confidence            578899886554   6788 78887 689999999999999999999875 3310              01235689999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEee------------------------c-----CCCCCCceEEEeecCcccccCCC
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVI------------------------Q-----PHKQGSFSKLILADSALVHKKPS  155 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~-----~~~~g~~a~~~~v~~~~~~~ip~  155 (383)
                      ||++|+|+++  ++++|++||||+...                        +     ...+|+|+||++++.+.++++|+
T Consensus        65 hE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~  142 (343)
T PRK09880         65 HEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPE  142 (343)
T ss_pred             cccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCC
Confidence            9999999999  788999999998531                        0     01369999999999999999999


Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe-cCchHHHHHhcCC
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC-SGDAKDLVTSLNP  233 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~-~~~~~~~~~~lg~  233 (383)
                      ++++++++.. .++.+||+++.+ ...    .++++|+|+| +|++|++++|+|+.+|+ +|++++ +++++++++++|+
T Consensus       143 ~l~~~~aa~~-~~~~~a~~al~~-~~~----~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa  215 (343)
T PRK09880        143 KADEKVMAFA-EPLAVAIHAAHQ-AGD----LQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGA  215 (343)
T ss_pred             CCCHHHHHhh-cHHHHHHHHHHh-cCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCC
Confidence            9999876644 466789999974 444    6899999998 69999999999999999 688887 4567889999999


Q ss_pred             CeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949         234 NLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS  313 (383)
Q Consensus       234 ~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (383)
                      +.++++++.++.+.....+++|++||++|++.....+ +++++  ++|+++.+|...           +.  ..+++.. 
T Consensus       216 ~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~--~~~~~~~-  278 (343)
T PRK09880        216 DKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTC-LEVTR--AKGVMVQVGMGG-----------AP--PEFPMMT-  278 (343)
T ss_pred             cEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEccCC-----------CC--CccCHHH-
Confidence            9999988766654333334699999999987544343 89999  999999996421           00  0111111 


Q ss_pred             hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                       +    ..++..+. +... ..++++++++++++|++++  +++++|+++++++|++.+.+++..||++|.+
T Consensus       279 -~----~~k~~~i~-g~~~-~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        279 -L----IVKEISLK-GSFR-FTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             -H----HhCCcEEE-EEee-ccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence             1    11222221 1111 2467899999999999875  6789999999999999999888789999864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=5.7e-42  Score=325.00  Aligned_cols=313  Identities=18%  Similarity=0.177  Sum_probs=243.6

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++...+++  ++++ +.|.|+|+++||+|||.++|||++|++...|..                ....+|.++|||
T Consensus         2 ~~a~~~~~~~~~--l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~----------------~~~~~p~i~GhE   62 (368)
T TIGR02818         2 SRAAVAWAAGQP--LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGAD----------------PEGVFPVILGHE   62 (368)
T ss_pred             ceEEEEecCCCC--eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCC----------------CCCCCCeeeccc
Confidence            789998877654  7788 899999999999999999999999999988751                123568999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCceE
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFSK  141 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a~  141 (383)
                      ++|+|+++|+++++|++||||++....                                             ...|+|+|
T Consensus        63 ~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~ae  142 (368)
T TIGR02818        63 GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSE  142 (368)
T ss_pred             cEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCcccee
Confidence            999999999999999999999864210                                             01369999


Q ss_pred             EEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe
Q psy9949         142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC  220 (383)
Q Consensus       142 ~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~  220 (383)
                      |+++|.+.++++|+++++++++.+++++.|||+++.+.+++    +++++|+|+| +|++|++++|+|+.+|+ +|++++
T Consensus       143 y~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~----~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~  217 (368)
T TIGR02818       143 YTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKV----EEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAID  217 (368)
T ss_pred             eEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc
Confidence            99999999999999999999999999999999999777888    9999999998 69999999999999999 799988


Q ss_pred             c-CchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccCC
Q psy9949         221 S-GDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKNT  294 (383)
Q Consensus       221 ~-~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~~  294 (383)
                      + .+++++++++|++.++++++  .++.+.+.+.  +++|++||++|++.....+ +++++  ++ |+++.+|.+.... 
T Consensus       218 ~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~-~~~~~--~~~G~~v~~g~~~~~~-  293 (368)
T TIGR02818       218 INPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAA-LECCH--KGWGESIIIGVAGAGQ-  293 (368)
T ss_pred             CCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHH-HHHhh--cCCCeEEEEeccCCCC-
Confidence            4 45778899999999988764  3455555432  3799999999986654443 88887  75 9999986431100 


Q ss_pred             CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc
Q psy9949         295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ  372 (383)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~  372 (383)
                                  .+.+....+.....+.+..   ........+++++++++++|+++  ++++++|+|+++++|++.+.+
T Consensus       294 ------------~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~  358 (368)
T TIGR02818       294 ------------EISTRPFQLVTGRVWRGSA---FGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHE  358 (368)
T ss_pred             ------------cccccHHHHhccceEEEee---ccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhC
Confidence                        0011011110011111111   00012356789999999999875  568999999999999999987


Q ss_pred             CCCCCeEEEeC
Q psy9949         373 GHLRGKIILNA  383 (383)
Q Consensus       373 ~~~~gkvvl~~  383 (383)
                      ++. .|++|++
T Consensus       359 ~~~-~k~~v~~  368 (368)
T TIGR02818       359 GKS-IRTVIHY  368 (368)
T ss_pred             CCc-eeEEeeC
Confidence            765 6999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=8.3e-42  Score=320.95  Aligned_cols=307  Identities=20%  Similarity=0.279  Sum_probs=244.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++   .++++ +.+.|+++++||+||+.+++||++|++.+.+...               ....+|.++|||
T Consensus         1 mka~~~~~~~---~l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~---------------~~~~~p~i~G~e   61 (339)
T cd08239           1 MRGAVFPGDR---TVELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHR---------------APAYQGVIPGHE   61 (339)
T ss_pred             CeEEEEecCC---ceEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCC---------------ccCCCCceeccC
Confidence            7899998643   47888 8999999999999999999999999998766410               112357899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++++.|++||+|+.+..                         ...+|+|+||++++.+.++++|+++++++
T Consensus        62 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~  141 (339)
T cd08239          62 PAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFAD  141 (339)
T ss_pred             ceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999987531                         12359999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      |+.+++++.|||+++. ...+    +++++|+|+| +|++|++++|+|+.+|++ |++++++ ++.++++++|++.++++
T Consensus       142 aa~l~~~~~ta~~~l~-~~~~----~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~  215 (339)
T cd08239         142 GALLLCGIGTAYHALR-RVGV----SGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINS  215 (339)
T ss_pred             hhhhcchHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcC
Confidence            9999999999999996 5667    8999999998 699999999999999997 9998754 56788899999999988


Q ss_pred             CChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      ++.+ .+.+.+   ..++|++||++|+......+ +++++  ++|+++.+|.....     .         +......  
T Consensus       216 ~~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~-----~---------~~~~~~~--  275 (339)
T cd08239         216 GQDD-VQEIRELTSGAGADVAIECSGNTAARRLA-LEAVR--PWGRLVLVGEGGEL-----T---------IEVSNDL--  275 (339)
T ss_pred             Ccch-HHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEcCCCCc-----c---------cCcHHHH--
Confidence            7765 555543   24799999999988663333 88999  99999998642100     0         0000001  


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                         ..++..+. +......++++++++++++|+++  ++++++|+++++++||+.+.+++ .||+||++
T Consensus       276 ---~~~~~~i~-g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         276 ---IRKQRTLI-GSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             ---HhCCCEEE-EEecCCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence               11222221 23333567899999999999886  47789999999999999998875 69999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.1e-41  Score=322.83  Aligned_cols=308  Identities=19%  Similarity=0.297  Sum_probs=238.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      +||+.+...+.+..+.+. +++.|+|+++||+|||.++|||++|++.+.|..                ....+|.++|||
T Consensus         5 ~~a~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~----------------~~~~~p~i~GhE   67 (375)
T PLN02178          5 NKAFGWAANDESGVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHW----------------GFSRYPIIPGHE   67 (375)
T ss_pred             ceeEEEEEccCCCCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCC----------------CCCCCCcccCce
Confidence            445555555555557777 788899999999999999999999999988751                113468899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEe-----ec---------------------------CCCCCCceEEEeecCcccccCC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGV-----IQ---------------------------PHKQGSFSKLILADSALVHKKP  154 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~---------------------------~~~~g~~a~~~~v~~~~~~~ip  154 (383)
                      ++|+|+++|+++++|++||||...     |+                           ...+|+|+||+++|.+.++++|
T Consensus        68 ~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP  147 (375)
T PLN02178         68 IVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIP  147 (375)
T ss_pred             eeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECC
Confidence            999999999999999999999742     21                           1125999999999999999999


Q ss_pred             CCCCHHHHHhhhHHHHHHHHHHHHhhh-cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch-HHHHHhc
Q psy9949         155 SNISDEEAAGVLYTGLTAWSALQITAA-LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA-KDLVTSL  231 (383)
Q Consensus       155 ~~~~~~~aa~l~~~~~tA~~~l~~~~~-~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~-~~~~~~l  231 (383)
                      ++++++++++++++++|||+++..... .    +++++|+|.| +|++|++++|+|+.+|++|++++++ ++ .++++++
T Consensus       148 ~~ls~~~aa~l~~~~~ta~~al~~~~~~~----~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l  222 (375)
T PLN02178        148 DGLPSDSGAPLLCAGITVYSPMKYYGMTK----ESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL  222 (375)
T ss_pred             CCCCHHHcchhhccchHHHHHHHHhCCCC----CCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC
Confidence            999999999999999999999864432 2    5899999998 6999999999999999999988854 33 5778899


Q ss_pred             CCCeeeeCCChHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949         232 NPNLVIDYNEPEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL  310 (383)
Q Consensus       232 g~~~v~~~~~~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (383)
                      |+++++++.+.   +++.+. +++|++|||+|.......+ +++++  ++|+++.+|.+.           +..  .+++
T Consensus       223 Ga~~~i~~~~~---~~v~~~~~~~D~vid~~G~~~~~~~~-~~~l~--~~G~iv~vG~~~-----------~~~--~~~~  283 (375)
T PLN02178        223 GADSFLVTTDS---QKMKEAVGTMDFIIDTVSAEHALLPL-FSLLK--VSGKLVALGLPE-----------KPL--DLPI  283 (375)
T ss_pred             CCcEEEcCcCH---HHHHHhhCCCcEEEECCCcHHHHHHH-HHhhc--CCCEEEEEccCC-----------CCC--ccCH
Confidence            99999887653   233322 4799999999987543333 88999  999999986421           000  0111


Q ss_pred             hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..  +    ..++..+ .+......+++.++++++++|++++.+ ++|||+++++||+.+.+++..||+|+++
T Consensus       284 ~~--~----~~~~~~i-~g~~~~~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        284 FP--L----VLGRKMV-GGSQIGGMKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             HH--H----HhCCeEE-EEeCccCHHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            11  1    1122222 233334567899999999999998776 5799999999999999999889999874

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=5.1e-42  Score=320.35  Aligned_cols=315  Identities=22%  Similarity=0.258  Sum_probs=245.9

Q ss_pred             eeeEEEeecCCC---ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          27 TAAWQISSYGGA---DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        27 ~~a~~~~~~g~~---~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      ||++++.++++|   +.++++ +.|.|+|+++||+||+.++|+|++|++...|..+               ....+|.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~---------------~~~~~p~v~   64 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYG---------------STKALPVPP   64 (324)
T ss_pred             CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC---------------CCCCCCcCC
Confidence            789999998876   578888 8999999999999999999999999998887511               123467899


Q ss_pred             cCceeEEEEecCCCCCC-CCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhc
Q psy9949         104 GRDFCGKIVAKGPRVTD-LNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL  182 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~-~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~  182 (383)
                      |||++|+|+++|+++++ |++||+|+++...  +|+|++|+++|.+.++++|+++++++++.+++.++|||..+ ....+
T Consensus        65 G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~--~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~  141 (324)
T cd08291          65 GFEGSGTVVAAGGGPLAQSLIGKRVAFLAGS--YGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE  141 (324)
T ss_pred             CcceEEEEEEECCCccccCCCCCEEEecCCC--CCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc
Confidence            99999999999999996 9999999987531  49999999999999999999999999999888899998554 34543


Q ss_pred             CccCCCCCEEEEE-cCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEE
Q psy9949         183 GLVYPRDKRVLVL-GASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVI  257 (383)
Q Consensus       183 ~~~~~~~~~VlI~-ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v  257 (383)
                           ++++++|+ +|+|++|++++|+|+.+|++|++++++ ++.++++++|++++++++..++.+++.+.   .++|++
T Consensus       142 -----~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~v  216 (324)
T cd08291         142 -----EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIF  216 (324)
T ss_pred             -----CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEE
Confidence                 45556665 789999999999999999999998855 56788899999999998887887776543   479999


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHH
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYA  337 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (383)
                      ||++|+......  +++++  ++|+++.+|.......       ... ....+..    +...+.+............+.
T Consensus       217 id~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~-------~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  280 (324)
T cd08291         217 FDAVGGGLTGQI--LLAMP--YGSTLYVYGYLSGKLD-------EPI-DPVDLIF----KNKSIEGFWLTTWLQKLGPEV  280 (324)
T ss_pred             EECCCcHHHHHH--HHhhC--CCCEEEEEEecCCCCc-------ccC-CHHHHhh----cCcEEEEEEHHHhhcccCHHH
Confidence            999998776555  88999  9999999864211100       000 0001111    111222211100001123567


Q ss_pred             HHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         338 VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       338 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ++++.++++ +.+++.++++|+|+++++|++.+.+++..||++|.
T Consensus       281 ~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         281 VKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            889999998 99999999999999999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.9e-41  Score=316.42  Aligned_cols=300  Identities=19%  Similarity=0.262  Sum_probs=238.5

Q ss_pred             eEEEeecCCC--ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          29 AWQISSYGGA--DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        29 a~~~~~~g~~--~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+.+.++|.+  ..++++ +.|.|+|+++||+|||.++|||++|++...|..                +...+|.++|||
T Consensus         1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~----------------~~~~~p~i~G~e   63 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDL----------------PVHRPRVTPGHE   63 (329)
T ss_pred             CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCC----------------CCCCCCccCCcc
Confidence            3566677765  468899 899999999999999999999999999988751                112347899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEe-----ec--------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGV-----IQ--------------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~--------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|+++++|++||+|+..     |.                    ...+|+|+||+.++.+.++++|+++++++
T Consensus        64 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~  143 (329)
T TIGR02822        64 VVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVE  143 (329)
T ss_pred             eEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHH
Confidence            999999999999999999999742     11                    11359999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~  240 (383)
                      ++.+++.+.|||+++. .+++    +++++|+|+| +|++|++++|+|+.+|++|+++++ +++.++++++|+++++++.
T Consensus       144 aa~l~~~~~ta~~~~~-~~~~----~~g~~VlV~G-~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~  217 (329)
T TIGR02822       144 LAPLLCAGIIGYRALL-RASL----PPGGRLGLYG-FGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAY  217 (329)
T ss_pred             hHHHhccchHHHHHHH-hcCC----CCCCEEEEEc-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceecccc
Confidence            9999999999999996 5777    8999999999 599999999999999999998885 4577899999999998754


Q ss_pred             ChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccc
Q psy9949         241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGEL  320 (383)
Q Consensus       241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (383)
                      +..       ..++|+++++.+.......+ +++++  ++|+++.+|......            ..++..  .    ..
T Consensus       218 ~~~-------~~~~d~~i~~~~~~~~~~~~-~~~l~--~~G~~v~~G~~~~~~------------~~~~~~--~----~~  269 (329)
T TIGR02822       218 DTP-------PEPLDAAILFAPAGGLVPPA-LEALD--RGGVLAVAGIHLTDT------------PPLNYQ--R----HL  269 (329)
T ss_pred             ccC-------cccceEEEECCCcHHHHHHH-HHhhC--CCcEEEEEeccCccC------------CCCCHH--H----Hh
Confidence            321       23689999988876654443 89999  999999986421000            001111  0    11


Q ss_pred             cCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         321 CKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      .++..+. +......+++.++++++++|+++. ++++|+|+++++|++.+.+++..||+||
T Consensus       270 ~~~~~i~-g~~~~~~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       270 FYERQIR-SVTSNTRADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             hCCcEEE-EeecCCHHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            1222222 233345678899999999999974 5789999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=2.3e-41  Score=321.10  Aligned_cols=313  Identities=20%  Similarity=0.212  Sum_probs=244.0

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      +||++++...+++  ++++ +.|.|+|+++||+|||.++|||++|++...|..                +...+|.++||
T Consensus         2 ~~~a~~~~~~~~~--~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~----------------~~~~~p~v~G~   62 (368)
T cd08300           2 TCKAAVAWEAGKP--LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGAD----------------PEGLFPVILGH   62 (368)
T ss_pred             cceEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCC----------------ccCCCCceecc
Confidence            5889988876654  7788 899999999999999999999999999888751                22357899999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCce
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFS  140 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a  140 (383)
                      |++|+|+++|+++++|++||||++....                                             ...|+|+
T Consensus        63 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~a  142 (368)
T cd08300          63 EGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFS  142 (368)
T ss_pred             ceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccce
Confidence            9999999999999999999999865110                                             0136899


Q ss_pred             EEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q psy9949         141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTT  219 (383)
Q Consensus       141 ~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~  219 (383)
                      ||+.++.+.++++|+++++++++.+++++.|||+++...+++    +++++|+|+| +|++|++++|+|+.+|+ +|+++
T Consensus       143 ey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~----~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~  217 (368)
T cd08300         143 EYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKV----EPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGI  217 (368)
T ss_pred             eEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999999999999999999999999999998767888    9999999998 79999999999999999 79998


Q ss_pred             ecC-chHHHHHhcCCCeeeeCCCh--HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccC
Q psy9949         220 CSG-DAKDLVTSLNPNLVIDYNEP--EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKN  293 (383)
Q Consensus       220 ~~~-~~~~~~~~lg~~~v~~~~~~--~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~  293 (383)
                      +++ ++.++++++|++.++++++.  ++.+++.+.  +++|++||++|+......+ +++++  ++ |+++.+|......
T Consensus       218 ~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a-~~~l~--~~~G~~v~~g~~~~~~  294 (368)
T cd08300         218 DINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAA-LEACH--KGWGTSVIIGVAAAGQ  294 (368)
T ss_pred             eCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHH-HHhhc--cCCCeEEEEccCCCCC
Confidence            854 56788899999999988763  466666532  4799999999986544433 88888  76 9999986421000


Q ss_pred             CCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHh
Q psy9949         294 TDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQ  371 (383)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~  371 (383)
                              ......+.+.   .  ...+.+...  + .....+++.++++++++|++++  +++++|+|+++++||+.+.
T Consensus       295 --------~~~~~~~~~~---~--~~~~~g~~~--~-~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~  358 (368)
T cd08300         295 --------EISTRPFQLV---T--GRVWKGTAF--G-GWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMH  358 (368)
T ss_pred             --------ccccCHHHHh---h--cCeEEEEEe--c-ccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHh
Confidence                    0000001111   0  111111110  0 0123678899999999999875  5789999999999999998


Q ss_pred             cCCCCCeEEEe
Q psy9949         372 QGHLRGKIILN  382 (383)
Q Consensus       372 ~~~~~gkvvl~  382 (383)
                      +++. .|+++|
T Consensus       359 ~~~~-~k~~~~  368 (368)
T cd08300         359 AGKS-IRTVVK  368 (368)
T ss_pred             CCCC-ceeeeC
Confidence            8775 599886

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=6.5e-41  Score=318.45  Aligned_cols=311  Identities=17%  Similarity=0.142  Sum_probs=243.8

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      .||++++.++++  .++++ +.+.|+++++||+|||.++|||++|++.+.+.                   ..+|.++||
T Consensus        12 ~mka~~~~~~~~--~~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~-------------------~~~p~i~Gh   69 (378)
T PLN02827         12 TCRAAVAWGAGE--ALVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ-------------------ALFPRIFGH   69 (378)
T ss_pred             eeEEEEEecCCC--CceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCC-------------------CCCCeeecc
Confidence            599999987653  37788 89999999999999999999999999987664                   235789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCce
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFS  140 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a  140 (383)
                      |++|+|+++|+++++|++||||++....                                             ..+|+|+
T Consensus        70 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~a  149 (378)
T PLN02827         70 EASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFS  149 (378)
T ss_pred             cceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccce
Confidence            9999999999999999999999875310                                             0138999


Q ss_pred             EEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q psy9949         141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTT  219 (383)
Q Consensus       141 ~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~  219 (383)
                      ||+.+|.+.++++|+++++++++.+++++.++|+++...+++    +++++|+|+| +|++|++++|+|+.+|+ .|+++
T Consensus       150 eyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~----~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~  224 (378)
T PLN02827        150 EYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADV----SKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGV  224 (378)
T ss_pred             eeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999999999999999999998989999988767777    8999999998 69999999999999999 57777


Q ss_pred             e-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccC
Q psy9949         220 C-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKN  293 (383)
Q Consensus       220 ~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~  293 (383)
                      + ++++.++++++|++.++++++  .++.+.+.+.  +++|++||++|+......+ +++++  ++ |+++.+|.+... 
T Consensus       225 ~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~-l~~l~--~g~G~iv~~G~~~~~-  300 (378)
T PLN02827        225 DINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTA-LQSCS--DGWGLTVTLGVPKAK-  300 (378)
T ss_pred             CCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHhhc--cCCCEEEEECCcCCC-
Confidence            7 455778899999999998775  3566655542  3799999999987543333 88888  88 999998643100 


Q ss_pred             CCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHh
Q psy9949         294 TDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQ  371 (383)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~  371 (383)
                                  ..+......+.++..++|...   .......+++++++++++|++++  +++++|+|+++++|++.+.
T Consensus       301 ------------~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~  365 (378)
T PLN02827        301 ------------PEVSAHYGLFLSGRTLKGSLF---GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMR  365 (378)
T ss_pred             ------------ccccccHHHHhcCceEEeeec---CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHH
Confidence                        000000000111222222110   00113567899999999999987  7899999999999999999


Q ss_pred             cCCCCCeEEEeC
Q psy9949         372 QGHLRGKIILNA  383 (383)
Q Consensus       372 ~~~~~gkvvl~~  383 (383)
                      +++. +|+||++
T Consensus       366 ~~~~-~k~vi~~  376 (378)
T PLN02827        366 EGKC-LRCVIHM  376 (378)
T ss_pred             CCCc-eEEEEEe
Confidence            8876 6999874

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=7.8e-41  Score=315.94  Aligned_cols=308  Identities=21%  Similarity=0.315  Sum_probs=242.7

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      +++++++..+++++  +.++ +++.|+++++||+|||.+++||++|++.+.|..                ....+|.++|
T Consensus         8 ~~~~~~~~~~~~~~--~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~----------------~~~~~p~i~G   68 (357)
T PLN02514          8 KKTTGWAARDPSGH--LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDL----------------GMSNYPMVPG   68 (357)
T ss_pred             ceEEEEEEecCCCC--ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCc----------------CcCCCCccCC
Confidence            45999999998865  7788 799999999999999999999999999887751                1234688999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEe-----ec---------------------------CCCCCCceEEEeecCccccc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGV-----IQ---------------------------PHKQGSFSKLILADSALVHK  152 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~---------------------------~~~~g~~a~~~~v~~~~~~~  152 (383)
                      ||++|+|+++|+++++|++||+|+..     |+                           ...+|+|+||++++.+.+++
T Consensus        69 ~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  148 (357)
T PLN02514         69 HEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVK  148 (357)
T ss_pred             ceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEE
Confidence            99999999999999999999999741     11                           01259999999999999999


Q ss_pred             CCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHh
Q psy9949         153 KPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTS  230 (383)
Q Consensus       153 ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~  230 (383)
                      +|+++++++++.+++++.|||+++......    +++++|+|+| +|++|++++|+|+.+|++|+++++++ +. ..+++
T Consensus       149 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~----~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~  223 (357)
T PLN02514        149 IPEGMAPEQAAPLLCAGVTVYSPLSHFGLK----QSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEH  223 (357)
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHHcccC----CCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh
Confidence            999999999999999999999999766665    7899999997 79999999999999999988888543 44 34567


Q ss_pred             cCCCeeeeCCChHHHHHHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949         231 LNPNLVIDYNEPEAMHSIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD  309 (383)
Q Consensus       231 lg~~~v~~~~~~~~~~~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  309 (383)
                      +|++.++++.+..   .+.+ ..++|++||++|.......+ +++++  ++|+++.+|.+.           +.    ..
T Consensus       224 ~Ga~~~i~~~~~~---~~~~~~~~~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~----~~  282 (357)
T PLN02514        224 LGADDYLVSSDAA---EMQEAADSLDYIIDTVPVFHPLEPY-LSLLK--LDGKLILMGVIN-----------TP----LQ  282 (357)
T ss_pred             cCCcEEecCCChH---HHHHhcCCCcEEEECCCchHHHHHH-HHHhc--cCCEEEEECCCC-----------CC----Cc
Confidence            9998877665432   2222 24799999999976544433 88999  999999986431           00    01


Q ss_pred             HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +....+    ..++..+ .+......++++++++++++|++++++ ++|||+++.+||+.+.+++..||++|++
T Consensus       283 ~~~~~~----~~~~~~i-~g~~~~~~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        283 FVTPML----MLGRKVI-TGSFIGSMKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             ccHHHH----hhCCcEE-EEEecCCHHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence            111111    1222222 233445567899999999999998776 5899999999999999999889999874

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=5.9e-41  Score=318.57  Aligned_cols=312  Identities=18%  Similarity=0.176  Sum_probs=244.3

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      +|||+++.+.+++  ++++ +.+.|+|+++||+|||.++|||++|++.+.|..                ....+|.++||
T Consensus         2 ~~ka~~~~~~~~~--~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~----------------~~~~~p~i~G~   62 (369)
T cd08301           2 TCKAAVAWEAGKP--LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKG----------------QTPLFPRILGH   62 (369)
T ss_pred             ccEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCC----------------CCCCCCccccc
Confidence            6999999987655  7788 899999999999999999999999999988751                22456899999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecC----------------------------------------------CCCCCc
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP----------------------------------------------HKQGSF  139 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~  139 (383)
                      |++|+|+++|+++++|++||||+++...                                              ...|+|
T Consensus        63 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~  142 (369)
T cd08301          63 EAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTF  142 (369)
T ss_pred             ccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccc
Confidence            9999999999999999999999875210                                              023789


Q ss_pred             eEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEE
Q psy9949         140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVT  218 (383)
Q Consensus       140 a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~  218 (383)
                      +||++++.+.++++|+++++++++++++++.|||+++....++    +++++|+|+| +|++|++++|+|+.+|+ +|++
T Consensus       143 aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~  217 (369)
T cd08301         143 SEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV----KKGSTVAIFG-LGAVGLAVAEGARIRGASRIIG  217 (369)
T ss_pred             eeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEE
Confidence            9999999999999999999999999999999999998777888    9999999998 69999999999999999 8999


Q ss_pred             EecC-chHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCcc
Q psy9949         219 TCSG-DAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLK  292 (383)
Q Consensus       219 ~~~~-~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~  292 (383)
                      ++++ ++.++++++|++.++++.+  .++.+.+++.  +++|++||++|+......+ +++++  ++ |+++.+|.....
T Consensus       218 ~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~-~~~~~--~~~g~~v~~g~~~~~  294 (369)
T cd08301         218 VDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISA-FECVH--DGWGVTVLLGVPHKD  294 (369)
T ss_pred             EcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHHhh--cCCCEEEEECcCCCC
Confidence            9854 5778889999998888765  3455555432  3799999999987544443 78888  85 999998643210


Q ss_pred             CCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHH
Q psy9949         293 NTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKV  370 (383)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l  370 (383)
                      .             .+++....+.++..++|...   .....+++++++++++.+++++.  +++++|||+++++||+.+
T Consensus       295 ~-------------~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~  358 (369)
T cd08301         295 A-------------VFSTHPMNLLNGRTLKGTLF---GGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLL  358 (369)
T ss_pred             c-------------ccccCHHHHhcCCeEEEEec---CCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHH
Confidence            0             01111111101222222110   00112467899999999998754  678999999999999999


Q ss_pred             hcCCCCCeEEE
Q psy9949         371 QQGHLRGKIIL  381 (383)
Q Consensus       371 ~~~~~~gkvvl  381 (383)
                      .+++.. |++|
T Consensus       359 ~~~~~~-k~~~  368 (369)
T cd08301         359 LKGECL-RCIL  368 (369)
T ss_pred             HCCCce-eEEe
Confidence            988864 8886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>KOG1198|consensus

Probab=100.00  E-value=8.6e-40  Score=302.13  Aligned_cols=327  Identities=34%  Similarity=0.467  Sum_probs=256.9

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      .++.+.+..+.+...+.+.++.+.|.|++++++|++.++++|+.|+.+.+|.....            .....+|.+++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~------------~~~~~~p~ii~~   71 (347)
T KOG1198|consen    4 KIRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPI------------PLGREFPGIIGR   71 (347)
T ss_pred             ccceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCC------------CCccCCCCcccc
Confidence            34444454444444445555899999999999999999999999999999873211            122357755555


Q ss_pred             ceeEE---EEecC-CCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhh-
Q psy9949         106 DFCGK---IVAKG-PRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITA-  180 (383)
Q Consensus       106 e~~G~---Vv~vG-~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~-  180 (383)
                      ++.|.   +...| ..+..+..||.+.....   .|+|+||+++|...++++|+++++++||++|.+++|||.+|.... 
T Consensus        72 ~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~---~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~  148 (347)
T KOG1198|consen   72 DGSGVVGAVESVGDDVVGGWVHGDAVVAFLS---SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAP  148 (347)
T ss_pred             ccCCceeEEeccccccccceEeeeEEeeccC---CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccc
Confidence            55444   44455 33445777777666653   699999999999999999999999999999999999999999888 


Q ss_pred             -----hcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhc--CC
Q psy9949         181 -----ALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAG--AG  252 (383)
Q Consensus       181 -----~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~  252 (383)
                           ++    ++|++|||+||+|++|++++|+|++.| .+|+++++.++.++++++|+++++||++.++.+.+++  ..
T Consensus       149 ~~~~~~~----~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~  224 (347)
T KOG1198|consen  149 GKRSKKL----SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGK  224 (347)
T ss_pred             ccccccc----CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCC
Confidence                 78    999999999999999999999999999 5888888999999999999999999999999999987  56


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceE--EEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKF--VTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF  330 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (383)
                      ++|+||||+|+.....+  ..++.  ..|+.  +.+.+....+...   . +...   +.....+ .....++..+.+..
T Consensus       225 ~~DvVlD~vg~~~~~~~--~~~l~--~~g~~~~i~~~~~~~~~~~~---~-~~~~---~~~~~~~-~~~~~~~~~~~~~~  292 (347)
T KOG1198|consen  225 GVDVVLDCVGGSTLTKS--LSCLL--KGGGGAYIGLVGDELANYKL---D-DLWQ---SANGIKL-YSLGLKGVNYRWLY  292 (347)
T ss_pred             CccEEEECCCCCccccc--hhhhc--cCCceEEEEecccccccccc---c-cchh---hhhhhhh-eeeeeeccceeeee
Confidence            89999999999876666  77887  66643  3332222111111   1 1111   1111111 24556667777888


Q ss_pred             EcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         331 FMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       331 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.+..+.++.+.+++++|++++.+.+.||++++.+|++.+.+++..||+++++
T Consensus       293 ~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  293 FVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             ecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence            88999999999999999999999999999999999999999999999999875

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=3.7e-40  Score=311.49  Aligned_cols=312  Identities=18%  Similarity=0.249  Sum_probs=227.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++...+ ++ ++++ +.|.|+|+++||||||.++|||++|++.+.|..+.             .+...+|.++|||
T Consensus         1 mka~~~~~~~-~~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~-------------~~~~~~p~i~G~e   64 (355)
T cd08230           1 MKAIAVKPGK-PG-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGT-------------APPGEDFLVLGHE   64 (355)
T ss_pred             CceeEecCCC-CC-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCC-------------CCCCCCCeeeccc
Confidence            6888888533 33 8888 89999999999999999999999999999885210             1122467899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC---------------------------CCCCCceEEEeecCcccccCCCCCCH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------HKQGSFSKLILADSALVHKKPSNISD  159 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~  159 (383)
                      ++|+|+++|++ +.|++||||+.....                           ..+|+|+||++++.+.++++|++++ 
T Consensus        65 ~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-  142 (355)
T cd08230          65 ALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-  142 (355)
T ss_pred             cceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-
Confidence            99999999999 899999999864211                           1359999999999999999999999 


Q ss_pred             HHHHhhhHHHHHHHHHHHHh------hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec----CchHHHHH
Q psy9949         160 EEAAGVLYTGLTAWSALQIT------AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS----GDAKDLVT  229 (383)
Q Consensus       160 ~~aa~l~~~~~tA~~~l~~~------~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~----~~~~~~~~  229 (383)
                      ++ +++..++.++++++...      ..+    +++++|+|+| +|++|++++|+||.+|++|+++++    ++++++++
T Consensus       143 ~~-a~~~~p~~~~~~a~~~~~~~~~~~~~----~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~  216 (355)
T cd08230         143 DV-GVLLEPLSVVEKAIEQAEAVQKRLPT----WNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE  216 (355)
T ss_pred             cc-eeecchHHHHHHHHHHHhhhhhhccc----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence            44 43334444444444321      223    6899999998 699999999999999999999885    34678889


Q ss_pred             hcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949         230 SLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD  309 (383)
Q Consensus       230 ~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  309 (383)
                      ++|++. +++.+.++.+ .....++|+|||++|+......+ +++++  ++|+++.+|......  ...+    ...  .
T Consensus       217 ~~Ga~~-v~~~~~~~~~-~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~G~~~~~~--~~~~----~~~--~  283 (355)
T cd08230         217 ELGATY-VNSSKTPVAE-VKLVGEFDLIIEATGVPPLAFEA-LPALA--PNGVVILFGVPGGGR--EFEV----DGG--E  283 (355)
T ss_pred             HcCCEE-ecCCccchhh-hhhcCCCCEEEECcCCHHHHHHH-HHHcc--CCcEEEEEecCCCCC--cccc----Chh--h
Confidence            999986 4665555443 33345899999999987543433 88999  999999986432100  0000    000  0


Q ss_pred             HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC------cccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ------IKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~------l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +..     .+..++..+ .+....+.++++++++++.++.      ++++++++|+++++++||+.+.++.  +|+||++
T Consensus       284 ~~~-----~~~~k~~~i-~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         284 LNR-----DLVLGNKAL-VGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             hhh-----hHhhcCcEE-EEecCCchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            000     112222222 2333445678899999998876      5667899999999999999887544  5999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-40  Score=307.13  Aligned_cols=320  Identities=17%  Similarity=0.225  Sum_probs=238.4

Q ss_pred             cceeeEEEee-cCC---CceeEeecc--ccCC-CCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949          25 TRTAAWQISS-YGG---ADELQFNDN--VKTP-ILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL   97 (383)
Q Consensus        25 ~~~~a~~~~~-~g~---~~~l~~~~~--~~~p-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~   97 (383)
                      .++|.|++.+ +.+   ++.|++++.  .+.| ++++|||||||.+++||+.|+....+.                ....
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~----------------~~~~   70 (348)
T PLN03154          7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDF----------------HDSY   70 (348)
T ss_pred             ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhcc----------------CCCC
Confidence            4578888853 322   355888832  3555 457999999999999999988654432                1112


Q ss_pred             CCCccccC--ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcc--c--ccCCCCCCHH-HHHhhhHHHH
Q psy9949          98 EFPLTLGR--DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSAL--V--HKKPSNISDE-EAAGVLYTGL  170 (383)
Q Consensus        98 ~~p~~~G~--e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~--~--~~ip~~~~~~-~aa~l~~~~~  170 (383)
                      .+|+++|+  |++|+|..+|+++++|++||+|+++      |+|+||++++.+.  +  +++|++++++ ++++++++++
T Consensus        71 ~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~  144 (348)
T PLN03154         71 LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGF  144 (348)
T ss_pred             CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHH
Confidence            35789998  8899999999999999999999875      7899999998753  5  4459999986 7889999999


Q ss_pred             HHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH-hcCCCeeeeCCC-hHHHHH
Q psy9949         171 TAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT-SLNPNLVIDYNE-PEAMHS  247 (383)
Q Consensus       171 tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~-~lg~~~v~~~~~-~~~~~~  247 (383)
                      |||+++.+.+++    ++|++|+|+|++|++|++++|+|+.+|++|++++++ ++.++++ ++|++.++++++ .++.+.
T Consensus       145 TA~~al~~~~~~----~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~  220 (348)
T PLN03154        145 TAYAGFYEVCSP----KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAA  220 (348)
T ss_pred             HHHHHHHHhcCC----CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHH
Confidence            999999877888    999999999988999999999999999999998855 4667776 799999999875 366666


Q ss_pred             HhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCcc
Q psy9949         248 IAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNT  325 (383)
Q Consensus       248 i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (383)
                      +.+.  +++|++||++|+......  +++++  ++|+++.+|........   ...+.. ....+..    +++.+.|..
T Consensus       221 i~~~~~~gvD~v~d~vG~~~~~~~--~~~l~--~~G~iv~~G~~~~~~~~---~~~~~~-~~~~~~~----k~~~i~g~~  288 (348)
T PLN03154        221 LKRYFPEGIDIYFDNVGGDMLDAA--LLNMK--IHGRIAVCGMVSLNSLS---ASQGIH-NLYNLIS----KRIRMQGFL  288 (348)
T ss_pred             HHHHCCCCcEEEEECCCHHHHHHH--HHHhc--cCCEEEEECccccCCCC---CCCCcc-cHHHHhh----ccceEEEEE
Confidence            6543  479999999998655444  89999  99999998642111000   000000 0011111    122222211


Q ss_pred             EEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         326 IRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .. .......+.++++++++++|++++.+..+|+|+++++|++.+.+++..||+||++
T Consensus       289 ~~-~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        289 QS-DYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence            00 0000124578899999999999988888899999999999999999999999974

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=9.8e-40  Score=310.96  Aligned_cols=320  Identities=14%  Similarity=0.144  Sum_probs=230.6

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCC-------CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILK-------SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE   98 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~   98 (383)
                      -|||+++..+++   ++++ ++|.|+|+       +|||||||.++|||++|++++.|..                 ...
T Consensus         2 ~mka~v~~~~~~---~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~-----------------~~~   60 (393)
T TIGR02819         2 GNRGVVYLGPGK---VEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT-----------------TAP   60 (393)
T ss_pred             CceEEEEecCCc---eeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC-----------------CCC
Confidence            489999987664   6788 88988874       6899999999999999999988751                 134


Q ss_pred             CCccccCceeEEEEecCCCCCCCCCCCEEEEee------------------cC----------------CCCCCceEEEe
Q psy9949          99 FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI------------------QP----------------HKQGSFSKLIL  144 (383)
Q Consensus        99 ~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------~~----------------~~~g~~a~~~~  144 (383)
                      +|.++|||++|+|+++|++|++|++||||+...                  ..                ..+|+|+||++
T Consensus        61 ~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~  140 (393)
T TIGR02819        61 TGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVM  140 (393)
T ss_pred             CCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEE
Confidence            689999999999999999999999999997521                  00                12599999999


Q ss_pred             ecCc--ccccCCCCCCH----HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE
Q psy9949         145 ADSA--LVHKKPSNISD----EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT  218 (383)
Q Consensus       145 v~~~--~~~~ip~~~~~----~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~  218 (383)
                      +|..  .++++|++++.    .+++++.+++.+||+++. ..++    +++++|+|.| +|++|++++|+|+.+|++++.
T Consensus       141 v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~----~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi  214 (393)
T TIGR02819       141 VPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGV----GPGSTVYIAG-AGPVGLAAAASAQLLGAAVVI  214 (393)
T ss_pred             echhhCceEECCCcccccccccceeeeccHHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEE
Confidence            9964  79999998753    456777788899999986 5777    8999999976 899999999999999996554


Q ss_pred             E-ec-CchHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCc--------------ccccccccccccCC
Q psy9949         219 T-CS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPL--------------DQINSYLPFLKTGK  279 (383)
Q Consensus       219 ~-~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~--------------~~~~~~~~~l~~~~  279 (383)
                      + ++ .++.++++++|++.+....+.++.+.+.+   ..++|++||++|.+.              ....+ +++++  +
T Consensus       215 ~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~  291 (393)
T TIGR02819       215 VGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSL-MEVTR--V  291 (393)
T ss_pred             EeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHH-HHHhh--C
Confidence            4 33 34778999999975333333455555543   347999999999862              34443 88999  9


Q ss_pred             CceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccc-e
Q psy9949         280 FSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VID-S  356 (383)
Q Consensus       280 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~-~  356 (383)
                      +|+++.+|.+..++.....  .......+++.....    ..++..+. +......+.+.++++++++|+++.  +++ +
T Consensus       292 ~G~i~~~G~~~~~~~~~~~--~~~~~~~~~i~~~~~----~~~~~~i~-g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~  364 (393)
T TIGR02819       292 GGAIGIPGLYVTEDPGAVD--AAAKTGSLSIRFGLG----WAKSHSFH-TGQTPVMKYNRNLMQAILHDRVQIAKAVNVT  364 (393)
T ss_pred             CCEEEEeeecCCccccccc--ccccccccccchHHh----hccCceEE-eccCChhhhHHHHHHHHHcCCCCHHHceecc
Confidence            9999999764211110000  000001111111111    11112221 111122344578999999999864  455 7


Q ss_pred             eecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         357 KYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       357 ~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +|||+++++||+.+.+++. +|++|++
T Consensus       365 ~~~l~~~~~a~~~~~~~~~-~Kvvi~~  390 (393)
T TIGR02819       365 VISLDDAPEGYAEFDAGAA-KKFVIDP  390 (393)
T ss_pred             eecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence            8999999999999987754 8999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>KOG0025|consensus

Probab=100.00  E-value=9.5e-40  Score=279.98  Aligned_cols=324  Identities=22%  Similarity=0.223  Sum_probs=263.3

Q ss_pred             cCCCcccceeeEEEeecCCC-ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949          19 NHLKYSTRTAAWQISSYGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL   97 (383)
Q Consensus        19 ~~~~~~~~~~a~~~~~~g~~-~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~   97 (383)
                      ..+.+|...|+++++..|+| +.++++ .+++|.....+|+||.+|+.|||+|+-.++|.+               ...+
T Consensus        12 sa~q~~~~~kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvY---------------pvrP   75 (354)
T KOG0025|consen   12 SASQMPARSKALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVY---------------PVRP   75 (354)
T ss_pred             cccccccccceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhcccc---------------CCCC
Confidence            34556778999999999998 458899 899998888889999999999999999999984               3557


Q ss_pred             CCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHH
Q psy9949          98 EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQ  177 (383)
Q Consensus        98 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~  177 (383)
                      ++|.+-|.|++|+|+.+|+++++|++||+|+-...  +.|.|++|.+.+++.+++++..++++.||.+..+.||||..|.
T Consensus        76 ~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a--~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~  153 (354)
T KOG0025|consen   76 ELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA--NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLK  153 (354)
T ss_pred             CCCcccCCcceEEEEEecCCcCccCCCCeEeecCC--CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHH
Confidence            78999999999999999999999999999998764  4599999999999999999999999999999999999999999


Q ss_pred             HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH----HHHHhcCCCeeeeCCC---hHHHHHHh
Q psy9949         178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK----DLVTSLNPNLVIDYNE---PEAMHSIA  249 (383)
Q Consensus       178 ~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~----~~~~~lg~~~v~~~~~---~~~~~~i~  249 (383)
                      +.-++    ++||+|+-.||.+++|.+.+|+||++|++-+-++|++ +.    +.++.+||++|+...+   ..+.....
T Consensus       154 dfv~L----~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~  229 (354)
T KOG0025|consen  154 DFVQL----NKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKG  229 (354)
T ss_pred             HHHhc----CCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhc
Confidence            99999    9999999999999999999999999999888888653 22    3556799999984222   12222212


Q ss_pred             cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhh-hccccccCCccEEE
Q psy9949         250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSN-FESGELCKTNTIRW  328 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  328 (383)
                      +..++.+.|||+|+..+...  .+.|.  ++|+.+.+|+              +++..+.+.... +|+.+.++|.+...
T Consensus       230 ~~~~prLalNcVGGksa~~i--ar~L~--~GgtmvTYGG--------------MSkqPv~~~ts~lIFKdl~~rGfWvt~  291 (354)
T KOG0025|consen  230 DNPRPRLALNCVGGKSATEI--ARYLE--RGGTMVTYGG--------------MSKQPVTVPTSLLIFKDLKLRGFWVTR  291 (354)
T ss_pred             cCCCceEEEeccCchhHHHH--HHHHh--cCceEEEecC--------------ccCCCcccccchheeccceeeeeeeee
Confidence            34579999999999988777  88999  9999999953              344444444433 36777888877654


Q ss_pred             EEEcC-----CHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCC-CCCeEEEe
Q psy9949         329 GFFMP-----IPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGH-LRGKIILN  382 (383)
Q Consensus       329 ~~~~~-----~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~-~~gkvvl~  382 (383)
                      +....     ..+.++++.++++.|+|........+|++...|++...... ..||-++.
T Consensus       292 W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~  351 (354)
T KOG0025|consen  292 WKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIV  351 (354)
T ss_pred             hhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEE
Confidence            43322     13578999999999999998888899999988888644332 22555543

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=306.84  Aligned_cols=312  Identities=19%  Similarity=0.270  Sum_probs=234.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      ||++++.+++.   ++++ +.|.|+| +++||+|||.++|+|++|++......                 ...+|.++||
T Consensus         1 Mka~~~~~~~~---~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-----------------~~~~p~i~G~   59 (347)
T PRK10309          1 MKSVVNDTDGI---VRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-----------------AHYYPITLGH   59 (347)
T ss_pred             CceEEEeCCCc---eEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-----------------CCCCCccccc
Confidence            78999987653   7888 7899987 59999999999999999997543220                 0235789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      |++|+|+++|+++++|++||+|+++..                        ...+|+|+||+.++.+.++++|+++++++
T Consensus        60 e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~  139 (347)
T PRK10309         60 EFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIED  139 (347)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHH
Confidence            999999999999999999999987521                        11359999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      ++.+. ...++|+++. ...+    +++++|+|+| +|++|++++|+|+.+|++ |++++++ ++.++++++|++.++++
T Consensus       140 aa~~~-~~~~~~~~~~-~~~~----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~  212 (347)
T PRK10309        140 GAFIE-PITVGLHAFH-LAQG----CEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNS  212 (347)
T ss_pred             hhhhh-HHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecC
Confidence            99874 3455788864 5666    8999999997 799999999999999996 6777744 56788899999999887


Q ss_pred             CChHHHHHHhc---CCCcc-EEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949         240 NEPEAMHSIAG---AGPYD-VILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF  315 (383)
Q Consensus       240 ~~~~~~~~i~~---~~g~d-~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (383)
                      ++.+ .+++.+   ..++| ++|||+|+......+ +++++  ++|+++.+|.+...      .  ..  ....+.. .+
T Consensus       213 ~~~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~~~------~--~~--~~~~~~~-~~  277 (347)
T PRK10309        213 REMS-APQIQSVLRELRFDQLILETAGVPQTVELA-IEIAG--PRAQLALVGTLHHD------L--HL--TSATFGK-IL  277 (347)
T ss_pred             cccC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHH-HHHhh--cCCEEEEEccCCCC------c--cc--ChhhhhH-Hh
Confidence            7644 333332   34788 999999987554443 89999  99999998643210      0  00  0000000 01


Q ss_pred             ccccccCCccEEEEEEcC-CHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         316 ESGELCKTNTIRWGFFMP-IPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .++..+.|...  +.... ..++++++++++++|+++  ++++++|+|+++++|++.+.+++..||+|+++
T Consensus       278 ~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        278 RKELTVIGSWM--NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hcCcEEEEEec--cccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            11223332111  00011 247789999999999884  67899999999999999999988889999875

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=4.3e-39  Score=305.20  Aligned_cols=311  Identities=20%  Similarity=0.183  Sum_probs=240.9

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      .|||+++.+.+++  ++++ +.|.|+++++||+|||.++|||++|++.+.|.                 ....+|.++||
T Consensus         2 ~~ka~~~~~~~~~--~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~-----------------~~~~~p~i~G~   61 (365)
T cd08277           2 KCKAAVAWEAGKP--LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGF-----------------KATLFPVILGH   61 (365)
T ss_pred             ccEEEEEccCCCC--cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCC-----------------CCCCCCeeccc
Confidence            5889998876654  7788 89999999999999999999999999998875                 11356889999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecC--------------------------------------------CCCCCceE
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP--------------------------------------------HKQGSFSK  141 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--------------------------------------------~~~g~~a~  141 (383)
                      |++|+|+++|++++++++||+|++....                                            ...|+|+|
T Consensus        62 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae  141 (365)
T cd08277          62 EGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQ  141 (365)
T ss_pred             ceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCccccccccccccee
Confidence            9999999999999999999999874210                                            01489999


Q ss_pred             EEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe
Q psy9949         142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC  220 (383)
Q Consensus       142 ~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~  220 (383)
                      |++++.+.++++|+++++++++.+++++.|||+++.+.+++    +++++|+|+| +|++|++++++|+.+|+ +|++++
T Consensus       142 ~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~  216 (365)
T cd08277         142 YTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKV----EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVD  216 (365)
T ss_pred             eEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEe
Confidence            99999999999999999999999999999999998777888    9999999997 79999999999999999 798888


Q ss_pred             cC-chHHHHHhcCCCeeeeCCCh--HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCCccCC
Q psy9949         221 SG-DAKDLVTSLNPNLVIDYNEP--EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPFLKNT  294 (383)
Q Consensus       221 ~~-~~~~~~~~lg~~~v~~~~~~--~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~~~~~  294 (383)
                      ++ ++.++++++|++.++++.+.  ++.+.+.+.  +++|++||++|+......+ +++++  ++ |+++.+|...... 
T Consensus       217 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~-~~~l~--~~~G~~v~~g~~~~~~-  292 (365)
T cd08277         217 INEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEA-LESTK--LGWGVSVVVGVPPGAE-  292 (365)
T ss_pred             CCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHhcc--cCCCEEEEEcCCCccc-
Confidence            54 57788899999999887652  334444432  5799999999976553433 88887  74 9999986431000 


Q ss_pred             CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc
Q psy9949         295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ  372 (383)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~  372 (383)
                        .    ...  ...+..     +..+.+..   ........+++++++++++++++  ++++++|+|+++++|++.+.+
T Consensus       293 --~----~~~--~~~~~~-----~~~i~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~  356 (365)
T cd08277         293 --L----SIR--PFQLIL-----GRTWKGSF---FGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKS  356 (365)
T ss_pred             --c----ccC--HhHHhh-----CCEEEeee---cCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHC
Confidence              0    000  011110     11111110   00001245789999999999764  578999999999999999988


Q ss_pred             CCCCCeEEEe
Q psy9949         373 GHLRGKIILN  382 (383)
Q Consensus       373 ~~~~gkvvl~  382 (383)
                      ++. .|+++.
T Consensus       357 ~~~-~k~~i~  365 (365)
T cd08277         357 GEC-IRTVIT  365 (365)
T ss_pred             CCC-ceEeeC
Confidence            874 588873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=9.5e-40  Score=302.36  Aligned_cols=297  Identities=20%  Similarity=0.194  Sum_probs=220.4

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeC-hhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVN-PIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~-~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      +||++++..++   .++++ +.+.|+|+++||+|||.++||| ++|++.++|..+.             .....+|.++|
T Consensus         1 ~~ka~~~~~~~---~l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~-------------~~~~~~P~i~G   63 (308)
T TIGR01202         1 KTQAIVLSGPN---QIELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPP-------------FPGMGYPLVPG   63 (308)
T ss_pred             CceEEEEeCCC---eEEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCC-------------CCCCCCCccCc
Confidence            47889887644   57888 8999999999999999999996 7999988876210             01135689999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecC------CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQP------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI  178 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~  178 (383)
                      ||++|+|+++|+++ +|++||||+.....      ...|+|+||+++|.+.++++|++++++. +.++ .+.|||+++..
T Consensus        64 hE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~  140 (308)
T TIGR01202        64 YESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG  140 (308)
T ss_pred             ceeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh
Confidence            99999999999998 69999999864210      1259999999999999999999999864 5454 46899999964


Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-C-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccE
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-G-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~  256 (383)
                       ..     .++++|+|+| +|++|++++|+|+.+|++++++++ . ++.+.+.+   ..++++.+.       ...++|+
T Consensus       141 -~~-----~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~~-------~~~g~Dv  203 (308)
T TIGR01202       141 -AE-----VKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEKD-------PRRDYRA  203 (308)
T ss_pred             -cc-----cCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhhc-------cCCCCCE
Confidence             32     4688999998 899999999999999997555443 2 23333333   344554321       2347999


Q ss_pred             EEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHH
Q psy9949         257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPY  336 (383)
Q Consensus       257 v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (383)
                      +|||+|++.....+ +++++  ++|+++.+|.+.           +.  ..+++.  .    ...++..+. +......+
T Consensus       204 vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~--~~~~~~--~----~~~~~~~i~-~~~~~~~~  260 (308)
T TIGR01202       204 IYDASGDPSLIDTL-VRRLA--KGGEIVLAGFYT-----------EP--VNFDFV--P----AFMKEARLR-IAAEWQPG  260 (308)
T ss_pred             EEECCCCHHHHHHH-HHhhh--cCcEEEEEeecC-----------CC--cccccc--h----hhhcceEEE-Eecccchh
Confidence            99999997653443 89999  999999986421           00  011111  1    112222222 33334577


Q ss_pred             HHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         337 AVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       337 ~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +++++++++++|++++  +++++|||+++++|++.+.++...+|++|+
T Consensus       261 ~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       261 DLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            8999999999999865  689999999999999998877777899874

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.5e-38  Score=300.19  Aligned_cols=344  Identities=49%  Similarity=0.796  Sum_probs=262.1

Q ss_pred             eeeEEEeecCCCc-eeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          27 TAAWQISSYGGAD-ELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        27 ~~a~~~~~~g~~~-~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      |||+++.++++++ .+.++ +.+.|+|. ++||+|||+++++|++|+.+..|.....+...++.. +..+....+|.++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~-~~~~~~~~~p~~~G   78 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQ-SCKYSGIEFPLTLG   78 (350)
T ss_pred             CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccc-cccccCCCCCeeec
Confidence            7889998888764 36777 79999994 999999999999999999988774110000000000 00000234588999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      ||++|+|+++|++++++++||+|+++......|+|++|+.++.+.++++|+++++++++.+++.++|||+++.+.+.+  
T Consensus        79 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~--  156 (350)
T cd08248          79 RDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGL--  156 (350)
T ss_pred             ceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccC--
Confidence            999999999999999999999999976433459999999999999999999999999999999999999999877766  


Q ss_pred             cCCC----CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         185 VYPR----DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       185 ~~~~----~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                        ++    +++|+|+|++|++|++++++|+.+|++|+++.++++.+.++++|.+.+++....++..++....++|++||+
T Consensus       157 --~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~  234 (350)
T cd08248         157 --NPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDT  234 (350)
T ss_pred             --CCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEEC
Confidence              54    999999999999999999999999999998887667778889999888888777777777766789999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE  340 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (383)
                      +|+......  +++++  ++|+++.++..........+.........+++....+  ....++....+.......+.+.+
T Consensus       235 ~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  308 (350)
T cd08248         235 VGGDTEKWA--LKLLK--KGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV--KSLLKGSHYRWGFFSPSGSALDE  308 (350)
T ss_pred             CChHHHHHH--HHHhc--cCCEEEEecCCcccccccccccchhhhhHHHHHHHHH--HHHhcCCCeeEEEECCCHHHHHH
Confidence            998754444  89999  9999999875432221111111111222333333322  11223333333333445788999


Q ss_pred             HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ++++++++.+.+.+.+.|++++++++++.+.+++..+|++++
T Consensus       309 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         309 LAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            999999999987788899999999999999988888898874

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.7e-39  Score=304.85  Aligned_cols=301  Identities=15%  Similarity=0.133  Sum_probs=217.1

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      ..+++++..++   +++++ +.+.|+ +++||+|||.++|||++|++++.|..+..            .....+|.++||
T Consensus         2 ~~~~~~~~~~~---~~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~------------~~~~~~P~i~Gh   64 (341)
T cd08237           2 INQVYRLVRPK---FFEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPE------------ALKKKLPMALIH   64 (341)
T ss_pred             cccceEEeccc---eEEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcc------------cccCCCCeeccc
Confidence            46788887655   47888 889995 99999999999999999999998852100            001357899999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeec---------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHh
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAG  164 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~  164 (383)
                      |++|+|+++|.+  +|++||||+....                     ...+|+|+||+++|.++++++|+++++++|+.
T Consensus        65 E~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~  142 (341)
T cd08237          65 EGIGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAF  142 (341)
T ss_pred             eeEEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhh
Confidence            999999998764  7999999986421                     12359999999999999999999999998875


Q ss_pred             hhHHHHHHHHHHHHh--hhcCccCCCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         165 VLYTGLTAWSALQIT--AALGLVYPRDKRVLVLGASGGVGTMAVQLLKA-WDI-EVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       165 l~~~~~tA~~~l~~~--~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~-~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      +. ++++||+++...  ..+    +++++|+|.| +|++|++++|+|+. +|+ +|++++++ ++++++++++++..++ 
T Consensus       143 ~~-~~~~a~~a~~~~~~~~~----~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~-  215 (341)
T cd08237         143 TE-LVSVGVHAISRFEQIAH----KDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID-  215 (341)
T ss_pred             hc-hHHHHHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh-
Confidence            54 677899998643  334    7899999999 79999999999986 664 89888854 5677777766653321 


Q ss_pred             CChHHHHHHhcCCCccEEEEcCCCC---cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIAGAGPYDVILDAAGIP---LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~~~~g~d~v~d~~g~~---~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                         ++.    +..++|+|||++|+.   .....+ +++++  ++|+++.+|.+.           +.  ..+..  ..+ 
T Consensus       216 ---~~~----~~~g~d~viD~~G~~~~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~--~~~~~--~~~-  269 (341)
T cd08237         216 ---DIP----EDLAVDHAFECVGGRGSQSAINQI-IDYIR--PQGTIGLMGVSE-----------YP--VPINT--RMV-  269 (341)
T ss_pred             ---hhh----hccCCcEEEECCCCCccHHHHHHH-HHhCc--CCcEEEEEeecC-----------CC--cccCH--HHH-
Confidence               111    223799999999963   233333 88999  999999986321           00  01111  111 


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcC-----CcccccceeecCCCH---HHHHHHHhcCCCCCeEEEeC
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERG-----QIKPVIDSKYNFCEL---PTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~l~~~~~~~~~l~~~---~~a~~~l~~~~~~gkvvl~~  383 (383)
                         ..++..+. +......+++++++++++++     .++++++++|+++++   +++|+.+.++ ..||+||++
T Consensus       270 ---~~k~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         270 ---LEKGLTLV-GSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             ---hhCceEEE-EecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence               12222222 22333467899999999998     577788999998655   5555544443 679999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3.1e-39  Score=304.38  Aligned_cols=305  Identities=20%  Similarity=0.290  Sum_probs=237.1

Q ss_pred             EEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeE
Q psy9949          30 WQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG  109 (383)
Q Consensus        30 ~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G  109 (383)
                      +++.+++++  ++++ +.|.|+++++||+|||.++|||++|++...+..               .....+|.++|||++|
T Consensus         2 ~~~~~~g~~--~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~---------------~~~~~~p~i~GhE~~G   63 (349)
T TIGR03201         2 WMMTEPGKP--MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGV---------------RTNHALPLALGHEISG   63 (349)
T ss_pred             ceEecCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCC---------------CccCCCCeeccccceE
Confidence            455666654  6778 899999999999999999999999998774320               1123568899999999


Q ss_pred             EEEecCCCCCCCCCCCEEEEe----------e--------------cCCCCCCceEEEeecCcccccCCC------CCCH
Q psy9949         110 KIVAKGPRVTDLNIDDVVYGV----------I--------------QPHKQGSFSKLILADSALVHKKPS------NISD  159 (383)
Q Consensus       110 ~Vv~vG~~v~~~~~Gd~V~~~----------~--------------~~~~~g~~a~~~~v~~~~~~~ip~------~~~~  159 (383)
                      +|+++|++++.+ +||||+..          |              +...+|+|+||+.++.+.++++|+      ++++
T Consensus        64 ~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~  142 (349)
T TIGR03201        64 RVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPL  142 (349)
T ss_pred             EEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCH
Confidence            999999999887 99999862          1              111359999999999999999999      8999


Q ss_pred             HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeee
Q psy9949         160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVID  238 (383)
Q Consensus       160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~  238 (383)
                      ++++.+++++.|||+++. ...+    +++++|+|+|+ |++|++++|+|+.+|++|++++++ ++.++++++|++.+++
T Consensus       143 ~~~a~~~~~~~ta~~a~~-~~~~----~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~  216 (349)
T TIGR03201       143 EHVSVVADAVTTPYQAAV-QAGL----KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLN  216 (349)
T ss_pred             HHhhhhcchHHHHHHHHH-hcCC----CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEec
Confidence            999999999999999997 4667    89999999996 999999999999999999988854 5778889999999888


Q ss_pred             CCCh---HHHHHHhcC---CCcc----EEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHH
Q psy9949         239 YNEP---EAMHSIAGA---GPYD----VILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF  308 (383)
Q Consensus       239 ~~~~---~~~~~i~~~---~g~d----~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~  308 (383)
                      +.+.   ++.+.+.+.   .|+|    ++|||+|+......+ +++++  ++|+++.+|.+...           .  .+
T Consensus       217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~~~-----------~--~~  280 (349)
T TIGR03201       217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESA-LSLLS--HGGTLVVVGYTMAK-----------T--EY  280 (349)
T ss_pred             CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHH-HHHHh--cCCeEEEECcCCCC-----------c--cc
Confidence            7653   455555432   3665    899999987765443 88999  99999998643110           0  11


Q ss_pred             HHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         309 DLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ++.  .+    ..++..+ .+......++++++++++++|++++  +++ .|+|+++++||+.+.+++..||++++.
T Consensus       281 ~~~--~~----~~~~~~~-~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       281 RLS--NL----MAFHARA-LGNWGCPPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             CHH--HH----hhcccEE-EEEecCCHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence            111  11    1111111 2333345678999999999999865  444 799999999999999999899999863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=4.8e-39  Score=300.90  Aligned_cols=312  Identities=20%  Similarity=0.252  Sum_probs=238.5

Q ss_pred             ceeeEEEeec--CCC--ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          26 RTAAWQISSY--GGA--DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        26 ~~~a~~~~~~--g~~--~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      .|++|++.+.  |++  +.++++ +.+.|+|+++||+|||.++|||+.|......                   ...+|.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-------------------~~~~p~   61 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-------------------LNEGDT   61 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-------------------CCCCCc
Confidence            5899999983  554  778999 8999999999999999999999876542111                   123578


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCc---ccccCCCCCC-----HHHHHhhhHHHHHHH
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA---LVHKKPSNIS-----DEEAAGVLYTGLTAW  173 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~---~~~~ip~~~~-----~~~aa~l~~~~~tA~  173 (383)
                      ++|+|++|+|++   .+++|++||||+++      ++|++|++++.+   .++++|++++     ...+++++++++|||
T Consensus        62 v~G~e~~G~V~~---~~~~~~~Gd~V~~~------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~  132 (329)
T cd08294          62 MIGTQVAKVIES---KNSKFPVGTIVVAS------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAY  132 (329)
T ss_pred             EecceEEEEEec---CCCCCCCCCEEEee------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHH
Confidence            999999999995   44679999999875      579999999999   9999999998     233446788999999


Q ss_pred             HHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC-
Q psy9949         174 SALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA-  251 (383)
Q Consensus       174 ~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~-  251 (383)
                      +++.+.+++    ++|++|+|+|++|++|++++|+|+.+|++|++++++ ++.++++++|++.++++++.++.+++++. 
T Consensus       133 ~al~~~~~~----~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~  208 (329)
T cd08294         133 FGLLEICKP----KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAA  208 (329)
T ss_pred             HHHHHhcCC----CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHC
Confidence            999878888    999999999999999999999999999999999855 56788899999999999888887777543 


Q ss_pred             -CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949         252 -GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF  330 (383)
Q Consensus       252 -~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (383)
                       .++|++||++|+......  +++++  ++|+++.+|........... ........+.+  .    ...+.+...  ..
T Consensus       209 ~~gvd~vld~~g~~~~~~~--~~~l~--~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~--~----~~~l~~~~~--~~  275 (329)
T cd08294         209 PDGIDCYFDNVGGEFSSTV--LSHMN--DFGRVAVCGSISTYNDKEPK-KGPYVQETIIF--K----QLKMEGFIV--YR  275 (329)
T ss_pred             CCCcEEEEECCCHHHHHHH--HHhhc--cCCEEEEEcchhccCCCCCC-cCcccHHHHhh--h----cceEEEEEh--hh
Confidence             479999999998665555  89999  99999998642111100000 00000001111  1    111111100  00


Q ss_pred             E-cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         331 F-MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       331 ~-~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      . ....+.++++++++++|++++.+..+|+++++++|++.+.+++..||+|+++
T Consensus       276 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         276 WQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             hHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            0 1124567889999999999877666799999999999999999999999985

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8.6e-39  Score=299.68  Aligned_cols=307  Identities=22%  Similarity=0.333  Sum_probs=247.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.++++.  ++++ +.+.|+++++||+||+.++++|++|+....|.                .+...+|.++|||
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~----------------~~~~~~p~~~g~e   61 (333)
T cd08296           1 YKAVQVTEPGGP--LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGA----------------MPGLSYPRVPGHE   61 (333)
T ss_pred             CeEEEEccCCCC--ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCC----------------CCCCCCCcccCcc
Confidence            789999987543  7888 89999999999999999999999999988875                1123457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++++++++||+|++...                         ...+|+|++|+.++.+.++++|+++++++
T Consensus        62 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  141 (333)
T cd08296          62 VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAE  141 (333)
T ss_pred             eeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHH
Confidence            99999999999999999999986210                         11258999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      ++.++++++|||+++.. .++    +++++|+|+| +|++|++++++|+.+|++|++++++ ++.++++++|+++++++.
T Consensus       142 aa~l~~~~~ta~~~~~~-~~~----~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~  215 (333)
T cd08296         142 AAPLLCAGVTTFNALRN-SGA----KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTS  215 (333)
T ss_pred             hhhhhhhhHHHHHHHHh-cCC----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCC
Confidence            99999999999999974 477    8999999999 8999999999999999999999865 567888999999999988


Q ss_pred             ChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccc
Q psy9949         241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGEL  320 (383)
Q Consensus       241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (383)
                      ..++.+.+.+..++|+++|++|........ +++++  ++|+++.++....               ..++....    +.
T Consensus       216 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~---------------~~~~~~~~----~~  273 (333)
T cd08296         216 KEDVAEALQELGGAKLILATAPNAKAISAL-VGGLA--PRGKLLILGAAGE---------------PVAVSPLQ----LI  273 (333)
T ss_pred             CccHHHHHHhcCCCCEEEECCCchHHHHHH-HHHcc--cCCEEEEEecCCC---------------CCCcCHHH----Hh
Confidence            777777776667899999998755443333 88999  9999999864320               00111110    11


Q ss_pred             cCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         321 CKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      .++..+. +......+++..++++++++++++.+ +.|+++++.+|++.+.+++..||+|++
T Consensus       274 ~~~~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         274 MGRKSIH-GWPSGTALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             hcccEEE-EeCcCCHHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            2222222 22234567889999999999988775 589999999999999999999999985

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=3.5e-39  Score=303.88  Aligned_cols=313  Identities=18%  Similarity=0.219  Sum_probs=230.4

Q ss_pred             CceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCC
Q psy9949          38 ADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGP  116 (383)
Q Consensus        38 ~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~  116 (383)
                      ++.++++ +.+.|+|. ++||||||.++|||+.|+........      .       .....+|.++|||++|+|+++|+
T Consensus        20 ~~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~------~-------~~~~~~~~~~G~e~~G~V~~vG~   85 (345)
T cd08293          20 AENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTG------T-------DYLAPWQLSQVLDGGGVGVVEES   85 (345)
T ss_pred             ccceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccc------c-------ccCCCccCCCceEeeEEEEEecc
Confidence            4668888 89999875 99999999999999999754322100      0       01124678899999999999999


Q ss_pred             CCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHH----HHhhhHHHHHHHHHHHHhhhcCccCCCC--C
Q psy9949         117 RVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEE----AAGVLYTGLTAWSALQITAALGLVYPRD--K  190 (383)
Q Consensus       117 ~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~~~~~~--~  190 (383)
                      ++++|++||+|+++.     ++|+||++++.+.++++|+++++.+    +++++.+++|||+++.+.+++    +++  +
T Consensus        86 ~v~~~~~Gd~V~~~~-----~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~----~~g~~~  156 (345)
T cd08293          86 KHQKFAVGDIVTSFN-----WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI----TPGANQ  156 (345)
T ss_pred             CCCCCCCCCEEEecC-----CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC----CCCCCC
Confidence            999999999998763     6899999999999999999864322    456677899999999877777    776  9


Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHh-cCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTS-LNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPL  265 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~  265 (383)
                      +|||+|++|++|++++|+|+++|+ +|++++++ ++.+++++ +|++.++++++.++.+.+.+.  .++|++||++|+..
T Consensus       157 ~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~  236 (345)
T cd08293         157 TMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEI  236 (345)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHH
Confidence            999999999999999999999999 89999865 45677765 999999999887777776543  57999999999876


Q ss_pred             ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE-cCCHHHHHHHHHH
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF-MPIPYAVKEINKF  344 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  344 (383)
                      ....  +++++  ++|+++.+|.......+ ...... ............  ....  ..+..... ....+.+++++++
T Consensus       237 ~~~~--~~~l~--~~G~iv~~G~~~~~~~~-~~~~~~-~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~l  306 (345)
T cd08293         237 SDTV--ISQMN--ENSHIILCGQISQYNKD-VPYPPP-LPEATEAILKER--NITR--ERFLVLNYKDKFEEAIAQLSQW  306 (345)
T ss_pred             HHHH--HHHhc--cCCEEEEEeeeecccCc-cCcccc-ccchhHHHhhhc--ceEE--EEEEeeccHhHHHHHHHHHHHH
Confidence            5444  89999  99999998632110000 000000 000000000000  1010  00000000 1124567888899


Q ss_pred             HHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         345 IERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       345 ~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++|++++.+..+++++++++|++.+.+++..||+|+++
T Consensus       307 ~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         307 VKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            999999877666679999999999999999899999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3.6e-39  Score=302.83  Aligned_cols=318  Identities=19%  Similarity=0.239  Sum_probs=238.5

Q ss_pred             ceeeEEEeecCCCceeEeeccccC----CCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKT----PILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~----p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      .+++|....+. ++.|+++ +.++    |+|+++||||||++++||+.|+....|...               ....+|+
T Consensus         7 ~~~~~~~~~~~-~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~---------------~~~~~p~   69 (338)
T cd08295           7 ILKAYVTGFPK-ESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDD---------------SLYLPPF   69 (338)
T ss_pred             EEecCCCCCCC-ccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCc---------------cccCCCc
Confidence            46677754443 5678888 7877    889999999999999999999998887511               1124577


Q ss_pred             cccCce--eEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecC-cccccCC-CCCCHH-HHHhhhHHHHHHHHHH
Q psy9949         102 TLGRDF--CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS-ALVHKKP-SNISDE-EAAGVLYTGLTAWSAL  176 (383)
Q Consensus       102 ~~G~e~--~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~-~~~~~ip-~~~~~~-~aa~l~~~~~tA~~~l  176 (383)
                      ++|++.  .|.+..+|+++++|++||+|+++      |+|+||+++|. ..++++| +++++. ++++++++++|||+++
T Consensus        70 ~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l  143 (338)
T cd08295          70 KPGEVITGYGVAKVVDSGNPDFKVGDLVWGF------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGF  143 (338)
T ss_pred             CCCCeEeccEEEEEEecCCCCCCCCCEEEec------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHH
Confidence            888754  45666678888899999999876      78999999999 7999995 678887 7999999999999999


Q ss_pred             HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh-cCCCeeeeCCC-hHHHHHHhcC--
Q psy9949         177 QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS-LNPNLVIDYNE-PEAMHSIAGA--  251 (383)
Q Consensus       177 ~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~-~~~~~~i~~~--  251 (383)
                      .+.+++    ++|++|+|+|++|++|++++|+|+.+|++|++++++ ++.+++++ +|+++++++++ .++.+.+...  
T Consensus       144 ~~~~~~----~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~  219 (338)
T cd08295         144 YEVCKP----KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP  219 (338)
T ss_pred             HHhcCC----CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC
Confidence            878888    999999999999999999999999999999998855 56678877 99999998764 4666665542  


Q ss_pred             CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE
Q psy9949         252 GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF  331 (383)
Q Consensus       252 ~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (383)
                      .++|++||++|+......  +++++  ++|+++.+|..........   ..... ...+..    +...+.+.... ...
T Consensus       220 ~gvd~v~d~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~~~~~---~~~~~-~~~~~~----~~~~i~g~~~~-~~~  286 (338)
T cd08295         220 NGIDIYFDNVGGKMLDAV--LLNMN--LHGRIAACGMISQYNLEWP---EGVRN-LLNIIY----KRVKIQGFLVG-DYL  286 (338)
T ss_pred             CCcEEEEECCCHHHHHHH--HHHhc--cCcEEEEecccccCCCCCC---CCccC-HHHHhh----ccceeeEEEeh-hhH
Confidence            579999999998655554  89999  9999999864211100000   00000 001111    11111111000 000


Q ss_pred             cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         332 MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       332 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ....+.++++++++++|++++.+...|+++++++|++.+.+++..||+|+++
T Consensus       287 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         287 HRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            0114567889999999999887767799999999999999999999999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=4.6e-39  Score=300.54  Aligned_cols=303  Identities=20%  Similarity=0.225  Sum_probs=229.1

Q ss_pred             CCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecC
Q psy9949          36 GGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKG  115 (383)
Q Consensus        36 g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG  115 (383)
                      ..++.|+++ +.+.|+|++|||||||.++|||+.++   .|..                .....|.++|.|++|+|+++|
T Consensus        14 ~~~~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~----------------~~~~~~~i~G~~~~g~v~~~~   73 (325)
T TIGR02825        14 PTDSDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAK----------------RLKEGDTMMGQQVARVVESKN   73 (325)
T ss_pred             CCCCceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccC----------------cCCCCCcEecceEEEEEEeCC
Confidence            346778888 89999999999999999999999654   3320                112246799999999999987


Q ss_pred             CCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccC----CCCCCHHHH-HhhhHHHHHHHHHHHHhhhcCccCCCCC
Q psy9949         116 PRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKK----PSNISDEEA-AGVLYTGLTAWSALQITAALGLVYPRDK  190 (383)
Q Consensus       116 ~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~i----p~~~~~~~a-a~l~~~~~tA~~~l~~~~~~~~~~~~~~  190 (383)
                      +   +|++||||+++      ++|++|++++.+.+.++    |++++++++ ++++++++|||+++.+.+++    ++++
T Consensus        74 ~---~~~~GdrV~~~------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~----~~g~  140 (325)
T TIGR02825        74 V---ALPKGTIVLAS------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGV----KGGE  140 (325)
T ss_pred             C---CCCCCCEEEEe------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCC----CCCC
Confidence            4   59999999986      46999999999887777    999999998 67889999999999878888    9999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCCh-HHHHHHhcC--CCccEEEEcCCCCcc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEP-EAMHSIAGA--GPYDVILDAAGIPLD  266 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~-~~~~~i~~~--~g~d~v~d~~g~~~~  266 (383)
                      +|||+|++|++|++++|+|+..|++|++++++ ++.++++++|++.++++++. ++.+.+...  +++|++||++|+...
T Consensus       141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~  220 (325)
T TIGR02825       141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFS  220 (325)
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHH
Confidence            99999999999999999999999999999855 56788899999999998764 455544432  479999999998766


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE  346 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (383)
                      ...  +++++  ++|+++.+|........ ...........+.+  .    ...+.+............+.+++++++++
T Consensus       221 ~~~--~~~l~--~~G~iv~~G~~~~~~~~-~~~~~~~~~~~~~~--~----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~  289 (325)
T TIGR02825       221 NTV--IGQMK--KFGRIAICGAISTYNRT-GPLPPGPPPEIVIY--Q----ELRMEGFIVNRWQGEVRQKALKELLKWVL  289 (325)
T ss_pred             HHH--HHHhC--cCcEEEEecchhhcccC-CCCCCCcchHHHhh--h----cceEeEEEehhhhhhhhHHHHHHHHHHHH
Confidence            554  89999  99999998642110000 00000000001111  1    11111110000000112457899999999


Q ss_pred             cCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         347 RGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       347 ~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +|++++.+..+|+++++++|++.+.+++..||+|++
T Consensus       290 ~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       290 EGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             CCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            999988777789999999999999999999999975

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=5.9e-39  Score=308.40  Aligned_cols=320  Identities=15%  Similarity=0.174  Sum_probs=234.7

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHh-ccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      |+||++++..++   .++++ +.|.|+++++||+|||.++|||++|++.+ .|....      ..+    .....+|.++
T Consensus         1 m~~~a~~~~~~~---~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~------~~~----~~~~~~p~i~   66 (410)
T cd08238           1 MKTKAWRMYGKG---DLRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHK------KVP----NDLAKEPVIL   66 (410)
T ss_pred             CCcEEEEEEcCC---ceEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccc------cCc----ccccCCCcee
Confidence            468999998765   37888 89999999999999999999999999976 443100      000    0112468899


Q ss_pred             cCceeEEEEecCCCCC-CCCCCCEEEEeec-------------CCCCCCceEEEeecCc----ccccCCCCCCHHHHHhh
Q psy9949         104 GRDFCGKIVAKGPRVT-DLNIDDVVYGVIQ-------------PHKQGSFSKLILADSA----LVHKKPSNISDEEAAGV  165 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~-~~~~Gd~V~~~~~-------------~~~~g~~a~~~~v~~~----~~~~ip~~~~~~~aa~l  165 (383)
                      |||++|+|+++|++++ +|++||||++...             ...+|+|+||++++.+    .++++|+++++++++.+
T Consensus        67 GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~  146 (410)
T cd08238          67 GHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLV  146 (410)
T ss_pred             ccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhc
Confidence            9999999999999998 5999999987521             1135999999999987    68999999999999865


Q ss_pred             hHHH--HHHHHHH--------HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecC-chHHHHHhc
Q psy9949         166 LYTG--LTAWSAL--------QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI---EVVTTCSG-DAKDLVTSL  231 (383)
Q Consensus       166 ~~~~--~tA~~~l--------~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~---~Vi~~~~~-~~~~~~~~l  231 (383)
                      ....  .+++.++        ...+++    +++++|+|+|++|++|++++|+|+.+|+   +|++++++ ++.++++++
T Consensus       147 epl~~~~~~~~a~~~~~~~~~~~~~~~----~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~  222 (410)
T cd08238         147 EPLSCVIGAYTANYHLQPGEYRHRMGI----KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRL  222 (410)
T ss_pred             chHHHHHHHhhhcccccccchhhhcCC----CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHh
Confidence            2211  2244332        234666    8999999999899999999999999754   79988854 567888886


Q ss_pred             --------CCC-eeeeCCC-hHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCC
Q psy9949         232 --------NPN-LVIDYNE-PEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG  298 (383)
Q Consensus       232 --------g~~-~v~~~~~-~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~  298 (383)
                              |++ .++++++ .++.+.+.+   ..++|++||++|+......+ +++++  ++|+++.++......     
T Consensus       223 ~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a-~~~l~--~~G~~v~~~g~~~~~-----  294 (410)
T cd08238         223 FPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEA-DTLLA--PDGCLNFFAGPVDKN-----  294 (410)
T ss_pred             ccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHH-HHHhc--cCCeEEEEEccCCCC-----
Confidence                    666 4677654 456665543   34799999999876654443 88999  999888764311000     


Q ss_pred             CchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCC
Q psy9949         299 LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLR  376 (383)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~  376 (383)
                           ....+++..      +..++..+ .+......++++++++++++|++++  +++++|+|+++++|++.+. ++..
T Consensus       295 -----~~~~~~~~~------~~~~~~~i-~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~  361 (410)
T cd08238         295 -----FSAPLNFYN------VHYNNTHY-VGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPG  361 (410)
T ss_pred             -----ccccccHHH------hhhcCcEE-EEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCC
Confidence                 000111111      12222222 2333446788999999999999977  6899999999999999998 7778


Q ss_pred             CeEEEeC
Q psy9949         377 GKIILNA  383 (383)
Q Consensus       377 gkvvl~~  383 (383)
                      ||+||..
T Consensus       362 gKvvl~~  368 (410)
T cd08238         362 GKKLIYT  368 (410)
T ss_pred             ceEEEEC
Confidence            9999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=2e-38  Score=296.03  Aligned_cols=310  Identities=21%  Similarity=0.232  Sum_probs=247.9

Q ss_pred             eeeEEEeecCCC-ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~-~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      ||++++.++++| +.++++ ++|.|.+.++||+|||.++++|++|+....|..+               .....|.++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~---------------~~~~~p~~~G~   64 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYG---------------YKPELPAIGGS   64 (324)
T ss_pred             CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC---------------CCCCCCCCCCc
Confidence            689999887765 458888 8999999999999999999999999998877511               12335789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV  185 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~  185 (383)
                      |++|+|+++|++++++++||+|+++..   .|+|++|+.++.+.++++|+++++++++.+++...|||+++. ..++   
T Consensus        65 e~~G~V~~~G~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~-~~~~---  137 (324)
T cd08292          65 EAVGVVDAVGEGVKGLQVGQRVAVAPV---HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLD-FLGV---  137 (324)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEeccC---CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHH-hhCC---
Confidence            999999999999999999999998752   499999999999999999999999999999988999999985 5777   


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA  261 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~  261 (383)
                       +++++|+|+|++|++|++++++|+++|+++++++++ ++.+.++++|++.++++++.++.+.+.+.   .++|++||++
T Consensus       138 -~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~  216 (324)
T cd08292         138 -KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSV  216 (324)
T ss_pred             -CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECC
Confidence             899999999999999999999999999999999855 45667777899999988887777766543   4799999999


Q ss_pred             CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc---------
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM---------  332 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  332 (383)
                      |+......  +++++  ++|+++.+|....   ....         +++..      ...++..+......         
T Consensus       217 g~~~~~~~--~~~l~--~~g~~v~~g~~~~---~~~~---------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  274 (324)
T cd08292         217 GGKLAGEL--LSLLG--EGGTLVSFGSMSG---EPMQ---------ISSGD------LIFKQATVRGFWGGRWSQEMSVE  274 (324)
T ss_pred             CChhHHHH--HHhhc--CCcEEEEEecCCC---CCCc---------CCHHH------HhhCCCEEEEEEcHHhhhhcCHH
Confidence            98765544  89999  9999999864310   0000         01000      01111222111110         


Q ss_pred             CCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         333 PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       333 ~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ...+.+.++++++++|.+++.+.+.|+++++.+|++.+.++...||+++.
T Consensus       275 ~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         275 YRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            12457889999999999986667889999999999999988888999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.8e-38  Score=299.70  Aligned_cols=316  Identities=22%  Similarity=0.306  Sum_probs=241.4

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++   .++++ +++.|+++++||+||+.++++|++|++...+....... .+.    .+.....+|.++|||
T Consensus         1 mka~~~~~~~---~l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~-~~~----~~~~~~~~p~i~G~e   71 (351)
T cd08233           1 MKAARYHGRK---DIRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPT-EGH----PHLTGETAPVTLGHE   71 (351)
T ss_pred             CceEEEecCC---ceEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccc-ccc----ccccccCCCceeccc
Confidence            7899998754   47888 89999999999999999999999999876542100000 000    000112368899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------C-CCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------P-HKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~-~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|+++++|++||+|++...                        . ..+|+|++|+.++.+.++++|+++++++
T Consensus        72 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~  151 (351)
T cd08233          72 FSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEE  151 (351)
T ss_pred             ceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHH
Confidence            99999999999999999999987321                        0 1259999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      ++.+ .++.|||+++ ...++    +++++|+|+| +|++|++++|+|+.+|+ +|++++++ ++.++++++|++.++++
T Consensus       152 aa~~-~~~~ta~~~l-~~~~~----~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~  224 (351)
T cd08233         152 AALV-EPLAVAWHAV-RRSGF----KPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP  224 (351)
T ss_pred             hhhc-cHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC
Confidence            9876 5678999999 57777    8999999998 69999999999999999 88888754 56778888999999998


Q ss_pred             CChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      ++.++.+++.+.   .++|++||++|+....... +++++  ++|+++.+|... ..              ..+....+ 
T Consensus       225 ~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~-~~--------------~~~~~~~~-  285 (351)
T cd08233         225 TEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTA-IDALR--PRGTAVNVAIWE-KP--------------ISFNPNDL-  285 (351)
T ss_pred             CccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHhcc--CCCEEEEEccCC-CC--------------CccCHHHH-
Confidence            887787777543   3699999999975443332 88999  999999986431 00              01111111 


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCH-HHHHHHHhcCCCC-CeEEE
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCEL-PTAFEKVQQGHLR-GKIIL  381 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~-~~a~~~l~~~~~~-gkvvl  381 (383)
                         ..++..+. +......++++++++++++|+++  +.++++|+++++ ++|++.+.+++.. ||+||
T Consensus       286 ---~~~~~~i~-g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         286 ---VLKEKTLT-GSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             ---HhhCcEEE-EEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence               11222222 22233467899999999999995  467889999996 7999999988875 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=5.4e-38  Score=294.67  Aligned_cols=312  Identities=24%  Similarity=0.355  Sum_probs=242.7

Q ss_pred             eeEEEeec---CCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          28 AAWQISSY---GGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        28 ~a~~~~~~---g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ||+++.++   ++++.++.. +.|.|+++++||+|||+++++|++|+....|..                ....+|.++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~----------------~~~~~~~~~g   63 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMA----------------PEAGQPKILG   63 (336)
T ss_pred             CceeeccccCCCCcccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCC----------------CCCCCCcccc
Confidence            57888887   778888888 899999999999999999999999998887751                2234578999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      +|++|+|+++|++++.|++||+|+++......|+|++|++++.+.++++|+++++++++.++++++|||+++....++  
T Consensus        64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~--  141 (336)
T TIGR02817        64 WDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGI--  141 (336)
T ss_pred             eeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCC--
Confidence            999999999999999999999999875322359999999999999999999999999999999999999999877877  


Q ss_pred             cCCC-----CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCcc
Q psy9949         185 VYPR-----DKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYD  255 (383)
Q Consensus       185 ~~~~-----~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d  255 (383)
                        ++     +++|+|+|++|++|++++|+|+.+ |++|++++++ ++.++++++|+++++++.. ++.+++.+.  .++|
T Consensus       142 --~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd  218 (336)
T TIGR02817       142 --NDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVS  218 (336)
T ss_pred             --CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCC
Confidence              66     899999999999999999999998 9999999865 4667888999999988654 566666543  4799


Q ss_pred             EEEEcCCCCc-ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEE--EEEEc
Q psy9949         256 VILDAAGIPL-DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR--WGFFM  332 (383)
Q Consensus       256 ~v~d~~g~~~-~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  332 (383)
                      +++|++++.. ....  +++++  ++|+++.++...       ..    ...  .+.....    ...+....  .....
T Consensus       219 ~vl~~~~~~~~~~~~--~~~l~--~~G~~v~~~~~~-------~~----~~~--~~~~~~~----~~~~~~~~~~~~~~~  277 (336)
T TIGR02817       219 YVFSLTHTDQHFKEI--VELLA--PQGRFALIDDPA-------EL----DIS--PFKRKSI----SLHWEFMFTRSMFQT  277 (336)
T ss_pred             EEEEcCCcHHHHHHH--HHHhc--cCCEEEEEcccc-------cc----cch--hhhhcce----EEEEEEeecccccch
Confidence            9999986543 3444  89999  999999874210       00    000  0000000    00000000  00000


Q ss_pred             C----CHHHHHHHHHHHHcCCcccccceeec---CCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         333 P----IPYAVKEINKFIERGQIKPVIDSKYN---FCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       333 ~----~~~~~~~~~~l~~~g~l~~~~~~~~~---l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +    ..+.+++++++++++.+++.+.+.++   ++++++|++.+.+++..||++++
T Consensus       278 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       278 ADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             hhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            0    12568899999999999876665664   68899999999999999999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2e-37  Score=292.48  Aligned_cols=328  Identities=27%  Similarity=0.350  Sum_probs=247.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcc---ccc-CCCCCCCCCcc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL---ETC-SVEPVLEFPLT  102 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~---~~~-~~~~~~~~p~~  102 (383)
                      ||++++..++.++.+.+.++.+.|++.+++|+|||.++++|++|+.+..|..+.......+-   +-+ .......+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            68888888777767777634577888999999999999999999998876421000000000   000 00013456889


Q ss_pred             ccCceeEEEEecCCCCCCCCCCCEEEEee----------------cCCCCCCceEEEeecCcccccCCCCCCHHHHHhhh
Q psy9949         103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVI----------------QPHKQGSFSKLILADSALVHKKPSNISDEEAAGVL  166 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~----------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~  166 (383)
                      +|||++|+|+++|+++++|++||+|++..                +...+|+|++|+.++.+.++++|+++++++++.++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~  160 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP  160 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence            99999999999999999999999998842                11235999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHH
Q psy9949         167 YTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMH  246 (383)
Q Consensus       167 ~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~  246 (383)
                      +++.|||+++ ...++    +++++|+|+|++|++|++++++|+.+|+++++++++++.+.++++|++.+.+.....+.+
T Consensus       161 ~~~~ta~~~~-~~~~~----~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  235 (350)
T cd08274         161 CSYSTAENML-ERAGV----GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLAD  235 (350)
T ss_pred             cHHHHHHHHH-hhcCC----CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHH
Confidence            9999999998 57788    899999999988999999999999999999999876677788889987666554433333


Q ss_pred             -HHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCcc
Q psy9949         247 -SIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNT  325 (383)
Q Consensus       247 -~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (383)
                       ......++|++||++|+......  +++++  ++|+++.++...           +.. ..+++.  .    ...++..
T Consensus       236 ~~~~~~~~~d~vi~~~g~~~~~~~--~~~l~--~~G~~v~~g~~~-----------~~~-~~~~~~--~----~~~~~~~  293 (350)
T cd08274         236 AKALGGEPVDVVADVVGGPLFPDL--LRLLR--PGGRYVTAGAIA-----------GPV-VELDLR--T----LYLKDLT  293 (350)
T ss_pred             HHhhCCCCCcEEEecCCHHHHHHH--HHHhc--cCCEEEEecccC-----------Ccc-ccCCHH--H----hhhcceE
Confidence             12223579999999998655555  89999  999999985321           000 001111  1    1122222


Q ss_pred             EEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         326 IRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +. +......+.+.+++++++++++++.+.++|+++++++|++.+.++...||+|++
T Consensus       294 ~~-~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         294 LF-GSTLGTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             EE-EeecCCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            21 223345788999999999999988788899999999999999988888999885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.5e-37  Score=294.51  Aligned_cols=310  Identities=24%  Similarity=0.342  Sum_probs=239.3

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      |++++.++++  .++++ +.+.|+++++||+|||.++++|++|+....|..                ....+|.++|||+
T Consensus         2 ka~~~~~~~~--~l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~----------------~~~~~p~~~G~e~   62 (361)
T cd08231           2 RAAVLTGPGK--PLEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRR----------------PRVPLPIILGHEG   62 (361)
T ss_pred             eEEEEcCCCC--CCEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCC----------------CCCCCCcccccCC
Confidence            6888888774  47888 899999999999999999999999999888761                1135678999999


Q ss_pred             eEEEEecCCCCCC------CCCCCEEEEeec-------------------------------CCCCCCceEEEeecCc-c
Q psy9949         108 CGKIVAKGPRVTD------LNIDDVVYGVIQ-------------------------------PHKQGSFSKLILADSA-L  149 (383)
Q Consensus       108 ~G~Vv~vG~~v~~------~~~Gd~V~~~~~-------------------------------~~~~g~~a~~~~v~~~-~  149 (383)
                      +|+|+++|+++++      |++||+|+++..                               ....|+|++|++++.+ .
T Consensus        63 ~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  142 (361)
T cd08231          63 VGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA  142 (361)
T ss_pred             ceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCc
Confidence            9999999999986      999999988621                               0125999999999986 7


Q ss_pred             cccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHH
Q psy9949         150 VHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDL  227 (383)
Q Consensus       150 ~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~  227 (383)
                      ++++|++++.+++++++++++|||+++.....+    +++++|||+| +|++|++++++|+.+|+ +|++++++ ++.++
T Consensus       143 ~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~----~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~  217 (361)
T cd08231         143 IVRVPDNVPDEVAAPANCALATVLAALDRAGPV----GAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLEL  217 (361)
T ss_pred             eEECCCCCCHHHHHHhcCHHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            999999999999999989999999999866665    6999999997 79999999999999999 99998855 45678


Q ss_pred             HHhcCCCeeeeCCChHHH---HHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCch
Q psy9949         228 VTSLNPNLVIDYNEPEAM---HSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVP  301 (383)
Q Consensus       228 ~~~lg~~~v~~~~~~~~~---~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~  301 (383)
                      ++++|++.+++++..++.   ..+.+   ..++|++||++|+......+ +++++  ++|+++.+|......    .   
T Consensus       218 ~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~----~---  287 (361)
T cd08231         218 AREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEG-LELLR--RGGTYVLVGSVAPAG----T---  287 (361)
T ss_pred             HHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHH-HHHhc--cCCEEEEEcCCCCCC----c---
Confidence            889999988887654332   34433   34799999999875543332 88999  999999986432100    0   


Q ss_pred             hhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcC--C--cccccceeecCCCHHHHHHHHhcCCCCC
Q psy9949         302 GLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG--Q--IKPVIDSKYNFCELPTAFEKVQQGHLRG  377 (383)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~--l~~~~~~~~~l~~~~~a~~~l~~~~~~g  377 (383)
                            .++....+    ..++..+. +......+.++++++++.++  .  +..+++++|+++++++||+.+.+++. +
T Consensus       288 ------~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~  355 (361)
T cd08231         288 ------VPLDPERI----VRKNLTII-GVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-L  355 (361)
T ss_pred             ------cccCHHHH----hhcccEEE-EcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-e
Confidence                  00100001    11222221 22223466788899999887  3  34567889999999999999988774 7


Q ss_pred             eEEEeC
Q psy9949         378 KIILNA  383 (383)
Q Consensus       378 kvvl~~  383 (383)
                      |+||+.
T Consensus       356 k~vi~~  361 (361)
T cd08231         356 KVVIDP  361 (361)
T ss_pred             EEEeCC
Confidence            999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=3e-37  Score=291.41  Aligned_cols=313  Identities=19%  Similarity=0.227  Sum_probs=242.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++.   +.++ +.+.|.++++||+|||.++++|++|++...+..                ....+|.++|||
T Consensus         1 mka~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~----------------~~~~~~~~~G~e   60 (351)
T cd08285           1 MKAFAMLGIGK---VGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGA----------------PGERHGMILGHE   60 (351)
T ss_pred             CceEEEccCCc---cEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCC----------------CCCCCCcccCcc
Confidence            78999988764   5677 788888999999999999999999998887651                123457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec---------------------------CCCCCCceEEEeecCc--ccccCCCCC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------PHKQGSFSKLILADSA--LVHKKPSNI  157 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~g~~a~~~~v~~~--~~~~ip~~~  157 (383)
                      ++|+|+++|++++++++||+|++...                           ...+|+|++|++++.+  .++++|+++
T Consensus        61 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~  140 (351)
T cd08285          61 AVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGL  140 (351)
T ss_pred             eEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCC
Confidence            99999999999999999999997421                           1135899999999974  899999999


Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      ++++++.++..++|||+++ ....+    +++++|+|+| +|++|++++|+|+.+|+ .|++++++ ++.++++++|++.
T Consensus       141 ~~~~aa~~~~~~~ta~~~~-~~~~~----~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~  214 (351)
T cd08285         141 TDEQAVMLPDMMSTGFHGA-ELANI----KLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATD  214 (351)
T ss_pred             CHHHhhhhccchhhHHHHH-HccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCce
Confidence            9999999999999999997 46777    8999999997 79999999999999999 58887755 4667889999999


Q ss_pred             eeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949         236 VIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK  312 (383)
Q Consensus       236 v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (383)
                      +++++..++.+++..   ..++|+++|++|+....... +++++  ++|+++.++......  ...+    ....+..  
T Consensus       215 ~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~--~~~~----~~~~~~~--  283 (351)
T cd08285         215 IVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQA-LKVLK--PGGTISNVNYYGEDD--YLPI----PREEWGV--  283 (351)
T ss_pred             EecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHH-HHHhh--cCCEEEEecccCCCc--eeec----Chhhhhh--
Confidence            998887777666643   24799999999986543333 88999  999999986432100  0000    0000110  


Q ss_pred             hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc---ccceeecCCCHHHHHHHHhcCCC-CCeEEEeC
Q psy9949         313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP---VIDSKYNFCELPTAFEKVQQGHL-RGKIILNA  383 (383)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~---~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~~  383 (383)
                             ......+.........++++++++++++|++++   .+.++|+++++++|++.+.+++. .+|++|++
T Consensus       284 -------~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         284 -------GMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             -------hccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence                   011112211111224678999999999999887   34567999999999999988874 57999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2.9e-37  Score=290.32  Aligned_cols=317  Identities=22%  Similarity=0.239  Sum_probs=248.7

Q ss_pred             eeeEEEeecCCC-ceeEeeccccCCCCCC-CeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          27 TAAWQISSYGGA-DELQFNDNVKTPILKS-KDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        27 ~~a~~~~~~g~~-~~l~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      |||+.+.+.+++ +.+.++ +.|.|++.+ ++|+||+.++|+|++|+....|..+..       +    ......|.++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~-------~----~~~~~~~~~~g   68 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIK-------P----PTTPEPPAVGG   68 (341)
T ss_pred             CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCC-------C----cccCCCCCCCC
Confidence            789999988876 357888 789998887 999999999999999999887751100       0    00012577999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      ||++|+|+++|+++..|++||+|++...  ..|+|++|+.++.+.++++|+++++++++.+++.++|||+++.....+  
T Consensus        69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~--  144 (341)
T cd08290          69 NEGVGEVVKVGSGVKSLKPGDWVIPLRP--GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKL--  144 (341)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEecCC--CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhccc--
Confidence            9999999999999999999999998752  249999999999999999999999999999999999999999877778  


Q ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-----chHHHHHhcCCCeeeeCCCh---HHHHHHhcC--CCc
Q psy9949         185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-----DAKDLVTSLNPNLVIDYNEP---EAMHSIAGA--GPY  254 (383)
Q Consensus       185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-----~~~~~~~~lg~~~v~~~~~~---~~~~~i~~~--~g~  254 (383)
                        +++++|+|+|++|++|++++++|+..|+++++++++     ++.+.++++|++.+++++..   ++...+...  +++
T Consensus       145 --~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~  222 (341)
T cd08290         145 --QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRP  222 (341)
T ss_pred             --CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCc
Confidence              899999999989999999999999999999999865     34677788999999887765   566666543  279


Q ss_pred             cEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--
Q psy9949         255 DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--  332 (383)
Q Consensus       255 d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  332 (383)
                      |++|||+|+......  +++++  ++|+++.++...... .           .+....      ...++..+......  
T Consensus       223 d~vld~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~-~-----------~~~~~~------~~~~~~~~~~~~~~~~  280 (341)
T cd08290         223 KLALNCVGGKSATEL--ARLLS--PGGTMVTYGGMSGQP-V-----------TVPTSL------LIFKDITLRGFWLTRW  280 (341)
T ss_pred             eEEEECcCcHhHHHH--HHHhC--CCCEEEEEeccCCCC-c-----------ccCHHH------HhhCCceEEEEecHHH
Confidence            999999998765554  89999  999999986421110 0           000000      01111122111100  


Q ss_pred             -------CCHHHHHHHHHHHHcCCcccccceee---cCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         333 -------PIPYAVKEINKFIERGQIKPVIDSKY---NFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       333 -------~~~~~~~~~~~l~~~g~l~~~~~~~~---~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                             ...+.+.++++++.++.+.+...+.+   ++++++++++.+.+++..||+|++|
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         281 LKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence                   01236888999999999987666667   9999999999999999999999986

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=7.3e-37  Score=292.97  Aligned_cols=326  Identities=24%  Similarity=0.288  Sum_probs=246.7

Q ss_pred             cccceeeEEEe--ecCCCc-eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          23 YSTRTAAWQIS--SYGGAD-ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        23 ~~~~~~a~~~~--~~g~~~-~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      .|.+|+|+++.  +.|++. .++++ +.+.|+++++||+||+.+++||++|++...|.....+. .+.    . ......
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~-~~~----~-~~~~~~   81 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFA-ARQ----R-RGRDEP   81 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccc-ccc----c-cCCCCC
Confidence            68899999886  345553 47888 88999999999999999999999999887664110000 000    0 000112


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEeecC-------------------------CCCCCceEEEeecCcccccCC
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP-------------------------HKQGSFSKLILADSALVHKKP  154 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~a~~~~v~~~~~~~ip  154 (383)
                      +.++|||++|+|+++|++++.+++||+|+++...                         ..+|+|++|++++...++++|
T Consensus        82 ~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP  161 (393)
T cd08246          82 YHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKP  161 (393)
T ss_pred             ccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECC
Confidence            3589999999999999999999999999886420                         124999999999999999999


Q ss_pred             CCCCHHHHHhhhHHHHHHHHHHHHh--hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhc
Q psy9949         155 SNISDEEAAGVLYTGLTAWSALQIT--AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSL  231 (383)
Q Consensus       155 ~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~l  231 (383)
                      +++++++++.+++++.|||+++...  +++    +++++|+|+|++|++|++++++|+.+|+++++++++ ++.+.++++
T Consensus       162 ~~l~~~~aa~l~~~~~tA~~al~~~~~~~~----~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~  237 (393)
T cd08246         162 KHLSWEEAAAYMLVGATAYRMLFGWNPNTV----KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRAL  237 (393)
T ss_pred             CCCCHHHHhhhcccHHHHHHHHhhcccccC----CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHc
Confidence            9999999999999999999998754  567    899999999988999999999999999998888754 567888899


Q ss_pred             CCCeeeeCCCh----------------------HHHHHHhc---CC-CccEEEEcCCCCcccccccccccccCCCceEEE
Q psy9949         232 NPNLVIDYNEP----------------------EAMHSIAG---AG-PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       232 g~~~v~~~~~~----------------------~~~~~i~~---~~-g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~  285 (383)
                      |++.+++++..                      .+.+.+.+   .. ++|++||++|+......  +++++  ++|+++.
T Consensus       238 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~--~~~l~--~~G~~v~  313 (393)
T cd08246         238 GAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTS--VFVCD--RGGMVVI  313 (393)
T ss_pred             CCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHH--HHHhc--cCCEEEE
Confidence            99988876432                      23344433   23 79999999998554444  89999  9999999


Q ss_pred             ecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHH
Q psy9949         286 LRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPT  365 (383)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~  365 (383)
                      ++......            ..+.+...      ..++..+ .+......+++.+++++++++.+.+.++++|+++++++
T Consensus       314 ~g~~~~~~------------~~~~~~~l------~~~~~~i-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~  374 (393)
T cd08246         314 CAGTTGYN------------HTYDNRYL------WMRQKRI-QGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPD  374 (393)
T ss_pred             EcccCCCC------------CCCcHHHH------hhheeEE-EecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHH
Confidence            86431100            00111110      1111111 12222346788999999999999877888999999999


Q ss_pred             HHHHHhcC-CCCCeEEEe
Q psy9949         366 AFEKVQQG-HLRGKIILN  382 (383)
Q Consensus       366 a~~~l~~~-~~~gkvvl~  382 (383)
                      |++.+.++ +..||+++-
T Consensus       375 a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         375 AHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             HHHHHHhCccccceEEEe
Confidence            99999988 788999875

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=3.5e-37  Score=288.58  Aligned_cols=310  Identities=21%  Similarity=0.244  Sum_probs=222.6

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc-cccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL-TLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~-~~G~  105 (383)
                      |+++++..+++.  ..++ +.+.|.++|+||+|||.++|||+||++.++|..+                ....|. ++||
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~----------------~~~~~~~i~GH   61 (350)
T COG1063           1 MKAAVVYVGGGD--VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEP----------------FVPPGDIILGH   61 (350)
T ss_pred             CceeEEEecCCc--cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCC----------------CCCCCCcccCc
Confidence            566666665543  2255 6666778899999999999999999999998622                233344 9999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEe------------------ec-----------CCCCCCceEEEeecCccccc-CCC
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGV------------------IQ-----------PHKQGSFSKLILADSALVHK-KPS  155 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~------------------~~-----------~~~~g~~a~~~~v~~~~~~~-ip~  155 (383)
                      |++|+|+++| .++.+++||||+..                  |.           ...+|+|+||+.+|.+++++ +|+
T Consensus        62 E~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd  140 (350)
T COG1063          62 EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPD  140 (350)
T ss_pred             cceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCC
Confidence            9999999999 77789999999743                  11           01469999999999755555 588


Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe-cCchHHHHHh-cC
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC-SGDAKDLVTS-LN  232 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~-~~~~~~~~~~-lg  232 (383)
                      ++ +.+++++..++.+++++.......    +++++|+|+| +|++|++++++|+.+|+ +|++++ +++|++++++ .+
T Consensus       141 ~~-~~~~aal~epla~~~~~~a~~~~~----~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g  214 (350)
T COG1063         141 GI-DEEAAALTEPLATAYHGHAERAAV----RPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGG  214 (350)
T ss_pred             CC-ChhhhhhcChhhhhhhhhhhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCC
Confidence            88 455555556778897774334444    5666999999 99999999999999998 788887 4568899988 66


Q ss_pred             CCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949         233 PNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD  309 (383)
Q Consensus       233 ~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  309 (383)
                      ++.+++....+....+.+.   .|+|++|||+|.+....++ +++++  ++|+++.+|-+.....         ......
T Consensus       215 ~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~a-i~~~r--~gG~v~~vGv~~~~~~---------~~~~~~  282 (350)
T COG1063         215 ADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQA-LEALR--PGGTVVVVGVYGGEDI---------PLPAGL  282 (350)
T ss_pred             CeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhc--CCCEEEEEeccCCccC---------ccCHHH
Confidence            6666655443444444332   3799999999977655554 88999  9999999864321100         000111


Q ss_pred             HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCC-CCeEEEeC
Q psy9949         310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHL-RGKIILNA  383 (383)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~~  383 (383)
                      +.    .+++.++|.     ........++.+++++++|++.+  ++++.++++++++||+.+.+.+. ..|++|+.
T Consensus       283 ~~----~kel~l~gs-----~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         283 VV----SKELTLRGS-----LRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HH----hcccEEEec-----cCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            11    123333332     11134678999999999999865  56889999999999999987554 45888863

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1.2e-36  Score=291.76  Aligned_cols=328  Identities=24%  Similarity=0.276  Sum_probs=247.9

Q ss_pred             CcccceeeEEEee--cCCC-ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949          22 KYSTRTAAWQISS--YGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE   98 (383)
Q Consensus        22 ~~~~~~~a~~~~~--~g~~-~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~   98 (383)
                      .+|.+||||++..  .++| +.+++. +.+.|.+++++|+||++++++|++|++...+.........+.      .....
T Consensus         3 ~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~------~~~~~   75 (398)
T TIGR01751         3 VVPETMYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRK------YGRDD   75 (398)
T ss_pred             ccchhhhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcc------cCCCC
Confidence            3578899999965  6765 568888 899999999999999999999999998776642110000000      00112


Q ss_pred             CC-ccccCceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCccccc
Q psy9949          99 FP-LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHK  152 (383)
Q Consensus        99 ~p-~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~  152 (383)
                      .| .++|||++|+|+++|++++.|++||+|++.+.                         ...+|+|++|+.++.+++++
T Consensus        76 ~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~  155 (398)
T TIGR01751        76 LPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMP  155 (398)
T ss_pred             CCceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEE
Confidence            23 37999999999999999999999999988642                         01358999999999999999


Q ss_pred             CCCCCCHHHHHhhhHHHHHHHHHHHH--hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH
Q psy9949         153 KPSNISDEEAAGVLYTGLTAWSALQI--TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT  229 (383)
Q Consensus       153 ip~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~  229 (383)
                      +|+++++++++.+++.+.|||+++..  .+++    +++++|+|+|++|++|++++++|+++|+++++++++ ++.+.++
T Consensus       156 vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~----~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~  231 (398)
T TIGR01751       156 KPKHLTWEEAACPGLTGATAYRQLVGWNPATV----KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR  231 (398)
T ss_pred             CCCCCCHHHHhhccchHHHHHHHHhhhhccCC----CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            99999999999999999999999864  3566    899999999988999999999999999998887744 5667888


Q ss_pred             hcCCCeeeeCCCh----------------------HHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEE
Q psy9949         230 SLNPNLVIDYNEP----------------------EAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFV  284 (383)
Q Consensus       230 ~lg~~~v~~~~~~----------------------~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v  284 (383)
                      ++|++.++|+++.                      .+.+.+.+   ..++|++|||+|+......  +++++  ++|+++
T Consensus       232 ~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~--~~~l~--~~G~~v  307 (398)
T TIGR01751       232 ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTS--VFVCR--RGGMVV  307 (398)
T ss_pred             HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHH--HHhhc--cCCEEE
Confidence            8999999887542                      13333332   2469999999997554444  88999  999999


Q ss_pred             EecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHH
Q psy9949         285 TLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELP  364 (383)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~  364 (383)
                      .++.+....       ..     ++...... +...+.+      ......+++++++++++++++.+.+.+++++++++
T Consensus       308 ~~g~~~~~~-------~~-----~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~  368 (398)
T TIGR01751       308 ICGGTTGYN-------HD-----YDNRYLWM-RQKRIQG------SHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIG  368 (398)
T ss_pred             EEccccCCC-------CC-----cCHHHHhh-cccEEEc------cccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHH
Confidence            996532110       00     00000000 0111111      11223556789999999999988888899999999


Q ss_pred             HHHHHHhcCCCCCeEEEeC
Q psy9949         365 TAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       365 ~a~~~l~~~~~~gkvvl~~  383 (383)
                      ++++.+.+++..||+|+++
T Consensus       369 ~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       369 QAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             HHHHHHHcCCCCceEEEEe
Confidence            9999999999999999874

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2e-36  Score=282.98  Aligned_cols=317  Identities=23%  Similarity=0.289  Sum_probs=249.7

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      +||++.+.++|.+..++++ +++.|.++++||+||+.++|+|++|+.+..|..                ....+|.++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~----------------~~~~~~~~~g~   63 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLY----------------PPPSLPSGLGT   63 (327)
T ss_pred             CceEEEEeccCChhHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCC----------------CCCCCCCccCc
Confidence            4899999999988889999 899999999999999999999999998887651                12345778999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV  185 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~  185 (383)
                      |++|+|+++|++++.+++||+|+++..  ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++...+++   
T Consensus        64 e~~G~v~~vG~~v~~~~~Gd~V~~~~~--~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~---  138 (327)
T PRK10754         64 EAAGVVSKVGSGVKHIKVGDRVVYAQS--ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI---  138 (327)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEECCC--CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCC---
Confidence            999999999999999999999986532  248999999999999999999999999999999999999999877888   


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA  261 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~  261 (383)
                       +++++|+|+|++|.+|++++++|+.+|++|++++++ ++.++++++|++.+++.+..++.+.+...   .++|+++||+
T Consensus       139 -~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~  217 (327)
T PRK10754        139 -KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSV  217 (327)
T ss_pred             -CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECC
Confidence             899999999999999999999999999999998855 45677888999888888777777766543   4799999999


Q ss_pred             CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc---CCHHHH
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM---PIPYAV  338 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  338 (383)
                      |+......  +++++  ++|+++.++.....   .......    .  +.....   ........ .+...   ...+.+
T Consensus       218 ~~~~~~~~--~~~l~--~~g~~v~~g~~~~~---~~~~~~~----~--~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~  280 (327)
T PRK10754        218 GKDTWEAS--LDCLQ--RRGLMVSFGNASGP---VTGVNLG----I--LNQKGS---LYVTRPSL-QGYITTREELTEAS  280 (327)
T ss_pred             cHHHHHHH--HHHhc--cCCEEEEEccCCCC---CCCcCHH----H--HhccCc---eEEeccee-ecccCCHHHHHHHH
Confidence            98655554  88999  99999998643210   0000000    0  000000   00000000 00000   113446


Q ss_pred             HHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         339 KEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       339 ~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      .++++++++|.+++  ...+.|++++++++++.+.+++..||+||.
T Consensus       281 ~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        281 NELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            67899999999875  357889999999999999999999999984

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.7e-36  Score=287.40  Aligned_cols=312  Identities=21%  Similarity=0.215  Sum_probs=242.0

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||+++.+++++  ++++ +.+.|+++++||+|||.++++|++|++...|..                 ...+|.++|
T Consensus         1 ~~~~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~-----------------~~~~p~v~G   60 (365)
T cd08278           1 MKTTAAVVREPGGP--FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGL-----------------PTPLPAVLG   60 (365)
T ss_pred             CccEEeeeccCCCc--ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCC-----------------CCCCCcccc
Confidence            47999999987654  6777 789999999999999999999999999988751                 134578999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeec----------------------------------------------CCCCCC
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ----------------------------------------------PHKQGS  138 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~----------------------------------------------~~~~g~  138 (383)
                      ||++|+|+++|++++++++||+|++...                                              ....|+
T Consensus        61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  140 (365)
T cd08278          61 HEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSS  140 (365)
T ss_pred             cceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccc
Confidence            9999999999999999999999985210                                              001489


Q ss_pred             ceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEE
Q psy9949         139 FSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVV  217 (383)
Q Consensus       139 ~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi  217 (383)
                      |++|+.++.++++++|+++++++++.++++++|||+++.....+    +++++|+|+| +|++|++++++|+..|+ +++
T Consensus       141 ~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~----~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~  215 (365)
T cd08278         141 FATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKP----RPGSSIAVFG-AGAVGLAAVMAAKIAGCTTII  215 (365)
T ss_pred             eeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEE
Confidence            99999999999999999999999999999999999998877888    8999999997 79999999999999999 577


Q ss_pred             EEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCC
Q psy9949         218 TTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNT  294 (383)
Q Consensus       218 ~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~  294 (383)
                      +++++ ++.++++++|++.+++++..++.+.+.+  ..++|+++||+|+......+ +++++  ++|+++.+|.......
T Consensus       216 ~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~~  292 (365)
T cd08278         216 AVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQA-VDALA--PRGTLALVGAPPPGAE  292 (365)
T ss_pred             EEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHH-HHHhc--cCCEEEEeCcCCCCCc
Confidence            77754 4667888999999998887666666543  35799999999976553433 89999  9999999864321100


Q ss_pred             CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHHHHHHHHHHcCCccc-ccceeecCCCHHHHHHHHh
Q psy9949         295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAVKEINKFIERGQIKP-VIDSKYNFCELPTAFEKVQ  371 (383)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~-~~~~~~~l~~~~~a~~~l~  371 (383)
                                 ..+++..  +    ..++..+.....  ....+.+.+++++++++++.. .+...|+++++++|++.+.
T Consensus       293 -----------~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~  355 (365)
T cd08278         293 -----------VTLDVND--L----LVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSE  355 (365)
T ss_pred             -----------cccCHHH--H----hhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHH
Confidence                       0011111  0    011112211111  112567788999999999854 2445899999999999998


Q ss_pred             cCCCCCeEEEe
Q psy9949         372 QGHLRGKIILN  382 (383)
Q Consensus       372 ~~~~~gkvvl~  382 (383)
                      +++.. |+|++
T Consensus       356 ~~~~~-k~~~~  365 (365)
T cd08278         356 SGKVI-KPVLR  365 (365)
T ss_pred             CCCce-EEEEC
Confidence            87764 88764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2.8e-36  Score=281.52  Aligned_cols=320  Identities=24%  Similarity=0.300  Sum_probs=249.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++.+..+.+. +.+.|.+.+++|+|++.++++|++|+....|..+.             .+...+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~p~~~g~e   66 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPG-------------PFPPELPYVPGGE   66 (324)
T ss_pred             CeEEEEcCCCCccceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCC-------------CCCCCCCcCCccc
Confidence            689999887877778887 67778889999999999999999999988775110             0123457889999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|+++.++++||+|+++.. ...|+|++|+.++.++++++|+++++++++.++++++||| ++....++    
T Consensus        67 ~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~----  140 (324)
T cd08244          67 VAGVVDAVGPGVDPAWLGRRVVAHTG-RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATL----  140 (324)
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEccC-CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCC----
Confidence            99999999999999999999998852 1249999999999999999999999999999999999995 55557787    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g  262 (383)
                      +++++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++.++++++.++.+.+.+.   .++|+++|++|
T Consensus       141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g  220 (324)
T cd08244         141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVG  220 (324)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCC
Confidence            899999999999999999999999999999999855 45677788999888888877777666532   47999999999


Q ss_pred             CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHH
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEIN  342 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (383)
                      +......  +++++  ++|+++.++.......   .+.      .......    ...+.+............+.+++++
T Consensus       221 ~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~---~~~------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  283 (324)
T cd08244         221 GAIGRAA--LALLA--PGGRFLTYGWASGEWT---ALD------EDDARRR----GVTVVGLLGVQAERGGLRALEARAL  283 (324)
T ss_pred             hHhHHHH--HHHhc--cCcEEEEEecCCCCCC---ccC------HHHHhhC----CcEEEEeecccCCHHHHHHHHHHHH
Confidence            8766444  89999  9999999864311100   000      0011111    1111111100000001246788899


Q ss_pred             HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ++++++.+.+.+.+.|+++++++|++.+.+++..||++++.
T Consensus       284 ~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         284 AEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999877888999999999999999999999999863

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=278.58  Aligned_cols=319  Identities=24%  Similarity=0.322  Sum_probs=247.8

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      +|||+++.+++.+..+.++ +.+.|++.++||+|||.++++|+.|+....|..+               .....|.++||
T Consensus         1 ~m~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~   64 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYP---------------PPPGSSEILGL   64 (334)
T ss_pred             CcEEEEEEecCCCcceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCcccce
Confidence            6999999998887778888 6788889999999999999999999988876411               12334678999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV  185 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~  185 (383)
                      |++|+|+++|++++++++||+|+++..   +|+|++|++++.++++++|+++++++++.+++++.|||+++...+++   
T Consensus        65 e~~G~v~~vG~~v~~~~~Gd~V~~~~~---~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~---  138 (334)
T PTZ00354         65 EVAGYVEDVGSDVKRFKEGDRVMALLP---GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDV---  138 (334)
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEecC---CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence            999999999999999999999998853   59999999999999999999999999999999999999999877888   


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChH-HHHHHhc---CCCccEEEEc
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPE-AMHSIAG---AGPYDVILDA  260 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~-~~~~i~~---~~g~d~v~d~  260 (383)
                       +++++|+|+|++|++|++++++|+.+|++++.+.++ ++.+++.++|++.++++...+ +.+++..   ..++|++||+
T Consensus       139 -~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  217 (334)
T PTZ00354        139 -KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDC  217 (334)
T ss_pred             -CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEEC
Confidence             899999999999999999999999999987776644 566778889998888877654 6666553   2479999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc----CCHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM----PIPY  336 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  336 (383)
                      +|+......  +++++  ++|+++.++......     .      ..+++..... +...+.+.........    ...+
T Consensus       218 ~~~~~~~~~--~~~l~--~~g~~i~~~~~~~~~-----~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  281 (334)
T PTZ00354        218 VGGSYLSET--AEVLA--VDGKWIVYGFMGGAK-----V------EKFNLLPLLR-KRASIIFSTLRSRSDEYKADLVAS  281 (334)
T ss_pred             CchHHHHHH--HHHhc--cCCeEEEEecCCCCc-----c------cccCHHHHHh-hCCEEEeeeccccchhhhHHHHHH
Confidence            987665555  88999  999999985321000     0      0011110000 0111111111000000    0124


Q ss_pred             HHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         337 AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       337 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .+++++++++++.+.+.+.+.+++++++++++.+.+++..||+|+++
T Consensus       282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        282 FEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             HHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEec
Confidence            56788899999999877888999999999999999888889999863

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1e-35  Score=279.33  Aligned_cols=303  Identities=24%  Similarity=0.343  Sum_probs=241.2

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      |+|++++.+  .+|+++ +.+.|++.++||+||+.++++|++|+....|.                .....+|.++|||+
T Consensus         1 ~~~~~~~~~--~~~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~----------------~~~~~~p~~~g~e~   61 (337)
T cd05283           1 KGYAARDAS--GKLEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNE----------------WGPTKYPLVPGHEI   61 (337)
T ss_pred             CceEEecCC--CCceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCC----------------cCCCCCCcccCcce
Confidence            467788766  458888 89999999999999999999999999988775                12234588999999


Q ss_pred             eEEEEecCCCCCCCCCCCEEEEe-e-------------------------------cCCCCCCceEEEeecCcccccCCC
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGV-I-------------------------------QPHKQGSFSKLILADSALVHKKPS  155 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~-~-------------------------------~~~~~g~~a~~~~v~~~~~~~ip~  155 (383)
                      +|+|+++|+++++|++||+|+.. .                               .....|+|++|+.++.+.++++|+
T Consensus        62 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~  141 (337)
T cd05283          62 VGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPE  141 (337)
T ss_pred             eeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCC
Confidence            99999999999999999999731 0                               012358999999999999999999


Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCC
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      ++++++++.+.+.+.|||+++.. ..+    +++++++|.| +|++|++++++|+.+|++|++++++ ++.++++++|++
T Consensus       142 ~~~~~~aa~l~~~~~ta~~~~~~-~~~----~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~  215 (337)
T cd05283         142 GLDSAAAAPLLCAGITVYSPLKR-NGV----GPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGAD  215 (337)
T ss_pred             CCCHHHhhhhhhHHHHHHHHHHh-cCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999874 457    8999999977 8999999999999999999999865 566788889999


Q ss_pred             eeeeCCChHHHHHHhcCCCccEEEEcCCCCc-ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949         235 LVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS  313 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (383)
                      .+++....++....  ..++|++|||+|+.. ....  +++++  ++|+++.+|.+....             .++..  
T Consensus       216 ~vi~~~~~~~~~~~--~~~~d~v~~~~g~~~~~~~~--~~~l~--~~G~~v~~g~~~~~~-------------~~~~~--  274 (337)
T cd05283         216 EFIATKDPEAMKKA--AGSLDLIIDTVSASHDLDPY--LSLLK--PGGTLVLVGAPEEPL-------------PVPPF--  274 (337)
T ss_pred             EEecCcchhhhhhc--cCCceEEEECCCCcchHHHH--HHHhc--CCCEEEEEeccCCCC-------------ccCHH--
Confidence            88887765543322  357999999999875 3444  88999  999999986431110             01111  


Q ss_pred             hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      .    +..++..+. +......+.++.++++++++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus       275 ~----~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         275 P----LIFGRKSVA-GSLIGGRKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             H----HhcCceEEE-EecccCHHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            0    011222222 22233578899999999999998765 689999999999999999999999985

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=282.75  Aligned_cols=307  Identities=23%  Similarity=0.351  Sum_probs=244.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+++++.+++++  +.++ +.+.|+++++|++||+.++++|++|+....|.                .+...+|.++|||
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g~e   61 (334)
T PRK13771          1 MKAVILPGFKQG--YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGF----------------YPRMKYPVILGHE   61 (334)
T ss_pred             CeeEEEcCCCCC--cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCC----------------CCCCCCCeecccc
Confidence            789999888763  7788 78999999999999999999999999888775                1223557889999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++.+++||+|+++...                        ..+|+|++|+.++.+.++++|+++++.++
T Consensus        62 ~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~  141 (334)
T PRK13771         62 VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGA  141 (334)
T ss_pred             ceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHh
Confidence            999999999999889999999986310                        11589999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      +.+++.+.+||+++... ++    +++++|+|+|++|++|++++++|+..|++|++++++ ++.+.++++ ++.+++++ 
T Consensus       142 a~l~~~~~~a~~~~~~~-~~----~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~-  214 (334)
T PRK13771        142 VIVPCVTGMVYRGLRRA-GV----KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS-  214 (334)
T ss_pred             hcccchHHHHHHHHHhc-CC----CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence            99999999999999755 77    899999999988999999999999999999988854 456777777 76666655 


Q ss_pred             hHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949         242 PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC  321 (383)
Q Consensus       242 ~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (383)
                       ++.+.+.+.+++|+++||+|+......  +++++  ++|+++.+|......    .+  .     ..+... +     .
T Consensus       215 -~~~~~v~~~~~~d~~ld~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~----~~--~-----~~~~~~-~-----~  272 (334)
T PRK13771        215 -KFSEEVKKIGGADIVIETVGTPTLEES--LRSLN--MGGKIIQIGNVDPSP----TY--S-----LRLGYI-I-----L  272 (334)
T ss_pred             -hHHHHHHhcCCCcEEEEcCChHHHHHH--HHHHh--cCCEEEEEeccCCCC----Cc--c-----cCHHHH-H-----h
Confidence             455556555579999999998765444  88999  999999986421100    00  0     000000 0     1


Q ss_pred             CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ++..+. +......+++++++++++++.++..+.+.|+++++++|++.+.++...||++++
T Consensus       273 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (334)
T PRK13771        273 KDIEII-GHISATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVK  332 (334)
T ss_pred             cccEEE-EecCCCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            111211 112345788999999999999987788899999999999999988888999986

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=7.4e-36  Score=280.58  Aligned_cols=306  Identities=20%  Similarity=0.268  Sum_probs=234.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++   .+.++ +.+.|+|+++||+||+.+++||++|++...|..                ....+|.++|||
T Consensus         1 m~a~~~~~~~---~~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~----------------~~~~~p~i~G~e   60 (339)
T PRK10083          1 MKSIVIEKPN---SLAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHN----------------PFAKYPRVIGHE   60 (339)
T ss_pred             CeEEEEecCC---eeEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCC----------------CcCCCCcccccc
Confidence            6888888755   47888 899999999999999999999999999887751                123468899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee------------------------cCCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI------------------------QPHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++.+++||+|+...                        ....+|+|++|+.++.+.++++|++++++++
T Consensus        61 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a  140 (339)
T PRK10083         61 FFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYA  140 (339)
T ss_pred             eEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHH
Confidence            9999999999999999999998421                        0112589999999999999999999999887


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHH-CCCE-EEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA-WDIE-VVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~-~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      + +...+.++|+++ ...++    +++++|+|+| +|++|++++|+|+. +|++ ++++.++ ++.++++++|++.++++
T Consensus       141 ~-~~~~~~~a~~~~-~~~~~----~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~  213 (339)
T PRK10083        141 V-MVEPFTIAANVT-GRTGP----TEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINN  213 (339)
T ss_pred             h-hhchHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence            6 445677788654 46777    8999999999 89999999999996 6995 6666644 46678899999999988


Q ss_pred             CChHHHHHHhcCC-CccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         240 NEPEAMHSIAGAG-PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       240 ~~~~~~~~i~~~~-g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      ++.++.+.+...+ ++|++||++|+....... +++++  ++|+++.+|....    ..    .....  .+.       
T Consensus       214 ~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~----~~----~~~~~--~~~-------  273 (339)
T PRK10083        214 AQEPLGEALEEKGIKPTLIIDAACHPSILEEA-VTLAS--PAARIVLMGFSSE----PS----EIVQQ--GIT-------  273 (339)
T ss_pred             ccccHHHHHhcCCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEccCCC----Cc----eecHH--HHh-------
Confidence            8777777765432 467999999976543333 88999  9999999864310    00    00000  111       


Q ss_pred             cccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcC-CCCCeEEEeC
Q psy9949         319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQG-HLRGKIILNA  383 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~-~~~gkvvl~~  383 (383)
                        .++..+. +. ....+.+.+++++++++++.+  ++.++|+++++++|++.+.++ ...+|+++++
T Consensus       274 --~~~~~~~-~~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        274 --GKELSIF-SS-RLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             --hcceEEE-EE-ecChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence              1111221 11 124678999999999999987  478899999999999999855 3558999864

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=8.7e-36  Score=280.20  Aligned_cols=309  Identities=23%  Similarity=0.325  Sum_probs=243.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++.+++++  +.+. +.+.|++++++|+||+.++++|++|+....|..+.             .....+|.++|+|
T Consensus         1 ~ka~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~~~~~G~e   64 (340)
T cd05284           1 MKAARLYEYGKP--LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGG-------------ILPYKLPFTLGHE   64 (340)
T ss_pred             CeeeEeccCCCC--ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcc-------------cccCCCCeecccc
Confidence            689999987654  6777 78889999999999999999999999988775110             0234567899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|+++..|++||+|+++..                        ...+|+|++|+.++.++++++|++++++++
T Consensus        65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~a  144 (340)
T cd05284          65 NAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEA  144 (340)
T ss_pred             eeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHh
Confidence            99999999999999999999987641                        112589999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHh-hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         163 AGVLYTGLTAWSALQIT-AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~-~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      +.+++.++|||+++... ..+    .++++|+|+| +|++|++++++|+.+| ++|++++++ ++.+.++++|+++++++
T Consensus       145 a~l~~~~~ta~~~l~~~~~~~----~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~  219 (340)
T cd05284         145 APLADAGLTAYHAVKKALPYL----DPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNA  219 (340)
T ss_pred             hhhcchHHHHHHHHHHhcccC----CCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence            99999999999999765 456    7899999999 6779999999999999 799988854 56677889999999988


Q ss_pred             CChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      +.. +.+++.+.   .++|+++|++|+....... +++++  ++|+++.++....   .  ..  .    .....     
T Consensus       220 ~~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~-~~~l~--~~g~~i~~g~~~~---~--~~--~----~~~~~-----  279 (340)
T cd05284         220 SDD-VVEEVRELTGGRGADAVIDFVGSDETLALA-AKLLA--KGGRYVIVGYGGH---G--RL--P----TSDLV-----  279 (340)
T ss_pred             Ccc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHH-HHHhh--cCCEEEEEcCCCC---C--cc--C----HHHhh-----
Confidence            776 66666542   4799999999974433332 88999  9999999864211   0  00  0    00001     


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                          .++..+. +......+.+.+++++++++.+++ ..+.|+++++++|++.+.+++..||+++.
T Consensus       280 ----~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~  339 (340)
T cd05284         280 ----PTEISVI-GSLWGTRAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLV  339 (340)
T ss_pred             ----hcceEEE-EEecccHHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEec
Confidence                1111221 111224678899999999999876 44579999999999999999999999986

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-35  Score=277.79  Aligned_cols=307  Identities=27%  Similarity=0.370  Sum_probs=245.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+++++..++  +.+.++ +.|.|++.+++|+|+++++++|++|++...|.                .+....|.++|||
T Consensus         1 m~a~~~~~~~--~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g~e   61 (332)
T cd08259           1 MKAAILHKPN--KPLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGF----------------FPRGKYPLILGHE   61 (332)
T ss_pred             CeEEEEecCC--CceEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCC----------------CCCCCCCeecccc
Confidence            6889988643  347888 78999999999999999999999999988775                1223457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++++++||+|+++...                        ...|+|++|++++.+.++++|++++++++
T Consensus        62 ~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~  141 (332)
T cd08259          62 IVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESA  141 (332)
T ss_pred             ceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHH
Confidence            999999999999999999999987410                        12589999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      +.+++++.|||+++.. .++    +++++++|+|++|++|++++++++..|++|++++++ ++.+.+.+++.+.+++..+
T Consensus       142 ~~~~~~~~ta~~~l~~-~~~----~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (332)
T cd08259         142 ALAACVVGTAVHALKR-AGV----KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK  216 (332)
T ss_pred             hhhccHHHHHHHHHHH-hCC----CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence            9999999999999986 777    899999999999999999999999999999998855 4566778888887776554


Q ss_pred             hHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949         242 PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC  321 (383)
Q Consensus       242 ~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (383)
                        +.+.+....++|++++++|.......  +++++  ++|+++.++......       .. .......          .
T Consensus       217 --~~~~~~~~~~~d~v~~~~g~~~~~~~--~~~~~--~~g~~v~~g~~~~~~-------~~-~~~~~~~----------~  272 (332)
T cd08259         217 --FSEDVKKLGGADVVIELVGSPTIEES--LRSLN--KGGRLVLIGNVTPDP-------AP-LRPGLLI----------L  272 (332)
T ss_pred             --HHHHHHhccCCCEEEECCChHHHHHH--HHHhh--cCCEEEEEcCCCCCC-------cC-CCHHHHH----------h
Confidence              66666655689999999998775444  88999  999999886421110       00 0000000          0


Q ss_pred             CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ++..+ .+......+++++++++++++.+++.+.++|+++++++||+.+.+++..||++++
T Consensus       273 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         273 KEIRI-IGSISATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             CCcEE-EEecCCCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            11111 1222345788999999999999988888899999999999999999888999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-36  Score=285.46  Aligned_cols=309  Identities=22%  Similarity=0.361  Sum_probs=245.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||||++.+++.+  +.++ +.|.|.++++||+||+.++++|++|+....|.                 ....+|.++|||
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~-----------------~~~~~p~~~g~e   60 (367)
T cd08263           1 MKAAVLKGPNPP--LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGE-----------------LPFPPPFVLGHE   60 (367)
T ss_pred             CeeEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCC-----------------CCCCCCcccccc
Confidence            789999987643  6777 78999999999999999999999999988775                 113567899999


Q ss_pred             eeEEEEecCCCCCC---CCCCCEEEEeec----------------------------------------------CCCCC
Q psy9949         107 FCGKIVAKGPRVTD---LNIDDVVYGVIQ----------------------------------------------PHKQG  137 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~---~~~Gd~V~~~~~----------------------------------------------~~~~g  137 (383)
                      ++|+|+++|+++++   |++||+|++...                                              ....|
T Consensus        61 ~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  140 (367)
T cd08263          61 ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMG  140 (367)
T ss_pred             cceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCC
Confidence            99999999999988   999999988310                                              01258


Q ss_pred             CceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-E
Q psy9949         138 SFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-V  216 (383)
Q Consensus       138 ~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-V  216 (383)
                      +|++|+.++.+.++++|+++++.+++.++.+++|||+++.+.+.+    +++++|+|+| +|++|++++++|+.+|++ +
T Consensus       141 ~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~----~~g~~VlI~g-~g~vG~~~~~lak~~G~~~v  215 (367)
T cd08263         141 GLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADV----RPGETVAVIG-VGGVGSSAIQLAKAFGASPI  215 (367)
T ss_pred             cceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeE
Confidence            999999999999999999999999999999999999999877877    8999999996 899999999999999996 8


Q ss_pred             EEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCC-cccccccccccccCCCceEEEecCCCc
Q psy9949         217 VTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIP-LDQINSYLPFLKTGKFSKFVTLRSPFL  291 (383)
Q Consensus       217 i~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~-~~~~~~~~~~l~~~~~G~~v~~~~~~~  291 (383)
                      ++++++ ++.++++++|++.+++++..++.+++..   ..++|++||++++. .....  +++++  ++|+++.++....
T Consensus       216 i~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~--~~~l~--~~G~~v~~g~~~~  291 (367)
T cd08263         216 IAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLA--LDVVR--DGGRAVVVGLAPG  291 (367)
T ss_pred             EEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHH--HHHHh--cCCEEEEEccCCC
Confidence            888754 4667888899999999887777766654   24699999999987 44444  89999  9999999864211


Q ss_pred             cCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-CCHHHHHHHHHHHHcCCcccc--cceeecCCCHHHHHH
Q psy9949         292 KNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-PIPYAVKEINKFIERGQIKPV--IDSKYNFCELPTAFE  368 (383)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~  368 (383)
                      ..  ..         .+++..  +    ..++..+. +... ...+.+++++++++++.+++.  +++.++++++.++++
T Consensus       292 ~~--~~---------~~~~~~--~----~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~  353 (367)
T cd08263         292 GA--TA---------EIPITR--L----VRRGIKII-GSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYE  353 (367)
T ss_pred             CC--cc---------ccCHHH--H----hhCCeEEE-ecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHH
Confidence            10  00         011110  0    01111111 1111 125789999999999998763  578899999999999


Q ss_pred             HHhcCCCCCeEEEe
Q psy9949         369 KVQQGHLRGKIILN  382 (383)
Q Consensus       369 ~l~~~~~~gkvvl~  382 (383)
                      .+.+++..||+|++
T Consensus       354 ~~~~~~~~g~~~~~  367 (367)
T cd08263         354 NLRKGLIHGRAIVE  367 (367)
T ss_pred             HHhcCCccceeeeC
Confidence            99999988999974

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=2.2e-36  Score=262.07  Aligned_cols=304  Identities=22%  Similarity=0.307  Sum_probs=233.1

Q ss_pred             CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce----eEEEEe
Q psy9949          38 ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF----CGKIVA  113 (383)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~----~G~Vv~  113 (383)
                      +++|+++ +.++|+|++||||+|+.|.+++|.    ++|.       |.+      .+..-.|+-+|-..    +|+|++
T Consensus        24 ~d~F~le-e~~vp~p~~GqvLl~~~ylS~DPy----mRgr-------m~d------~~SY~~P~~lG~~~~gg~V~~Vv~   85 (340)
T COG2130          24 PDDFRLE-EVDVPEPGEGQVLLRTLYLSLDPY----MRGR-------MSD------APSYAPPVELGEVMVGGTVAKVVA   85 (340)
T ss_pred             CCCceeE-eccCCCCCcCceEEEEEEeccCHH----Heec-------ccC------CcccCCCcCCCceeECCeeEEEEe
Confidence            3568999 899999999999999999999983    3333       222      11223355555544    556665


Q ss_pred             cCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCH--HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCE
Q psy9949         114 KGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISD--EEAAGVLYTGLTAWSALQITAALGLVYPRDKR  191 (383)
Q Consensus       114 vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~--~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~  191 (383)
                        ++..+|++||.|.+.      .+|++|.+++.+.+.|++++.-+  .....+..++.|||.+|.+.++.    ++|++
T Consensus        86 --S~~~~f~~GD~V~~~------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp----k~Get  153 (340)
T COG2130          86 --SNHPGFQPGDIVVGV------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP----KAGET  153 (340)
T ss_pred             --cCCCCCCCCCEEEec------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC----CCCCE
Confidence              677889999999988      47999999999999999866422  22334567889999999999999    99999


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh-cCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCccc
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS-LNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPLDQ  267 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~~~  267 (383)
                      |+|.+|+|++|..+.|+||..|++|++++.+ ++.+++.+ +|.|.++||+..++.+.+++.  .|+|++||++|++...
T Consensus       154 vvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~D  233 (340)
T COG2130         154 VVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLD  233 (340)
T ss_pred             EEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHH
Confidence            9999999999999999999999999999955 56678766 999999999999999999876  5899999999999987


Q ss_pred             ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-CCHHHHHHHHHHHH
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-PIPYAVKEINKFIE  346 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~  346 (383)
                      ..  +..|+  ..+|++.||.-...+....  +.++     ......+.+.+.++|.-.. ..+. ...+.++++.++++
T Consensus       234 Av--~~~ln--~~aRi~~CG~IS~YN~~~~--~~gp-----~~l~~l~~kr~~v~Gfiv~-~~~~~~~~e~~~~l~~wv~  301 (340)
T COG2130         234 AV--LPLLN--LFARIPVCGAISQYNAPEL--PPGP-----RRLPLLMAKRLRVQGFIVA-SDYDQRFPEALRELGGWVK  301 (340)
T ss_pred             HH--HHhhc--cccceeeeeehhhcCCCCC--CCCc-----chhhHHHhhhheeEEEEec-hhhhhhhHHHHHHHHHHHH
Confidence            77  88999  9999999974222221110  0111     1111111123344443221 1112 23588899999999


Q ss_pred             cCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         347 RGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       347 ~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +|+|+...+-+-.|+++++||.-|.++++.||.|+++
T Consensus       302 ~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         302 EGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             cCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEe
Confidence            9999887776678999999999999999999999985

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=7.6e-36  Score=280.38  Aligned_cols=306  Identities=18%  Similarity=0.273  Sum_probs=238.6

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++++++++..  ++ +.|.|+++++||+|||.++++|++|+....|..                . ...|.++|||
T Consensus         1 mka~~~~~~~~~~~--~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~----------------~-~~~~~~~g~e   60 (338)
T PRK09422          1 MKAAVVNKDHTGDV--VV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDF----------------G-DKTGRILGHE   60 (338)
T ss_pred             CeEEEecCCCCCce--EE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCC----------------C-CCCCccCCcc
Confidence            78999998776522  67 789999999999999999999999999887751                1 1236789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEE-----------eec--------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYG-----------VIQ--------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~-----------~~~--------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++++.|++||+|++           ++.              ...+|+|++|+.++.+.++++|+++++++
T Consensus        61 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~  140 (338)
T PRK09422         61 GIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQ  140 (338)
T ss_pred             cceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHH
Confidence            99999999999999999999986           220              11259999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      ++.++.+++|||+++ ..+++    +++++|+|+| +|++|++++++|+. .|++|++++++ ++.++++++|++.++++
T Consensus       141 aa~l~~~~~ta~~~~-~~~~~----~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  214 (338)
T PRK09422        141 ASSITCAGVTTYKAI-KVSGI----KPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINS  214 (338)
T ss_pred             eehhhcchhHHHHHH-HhcCC----CCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecc
Confidence            999999999999998 57788    9999999999 79999999999998 59999999855 57788899999988887


Q ss_pred             CC-hHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949         240 NE-PEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES  317 (383)
Q Consensus       240 ~~-~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (383)
                      +. .++.+.+.+. +++|.++++.++......+ +++++  ++|+++.+|....    ...         ++....    
T Consensus       215 ~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~~----~~~---------~~~~~~----  274 (338)
T PRK09422        215 KRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQA-VDAVR--AGGRVVAVGLPPE----SMD---------LSIPRL----  274 (338)
T ss_pred             cccccHHHHHHHhcCCCcEEEEeCCCHHHHHHH-HHhcc--CCCEEEEEeeCCC----Cce---------ecHHHH----
Confidence            54 5555666543 4788555555544443433 88999  9999999864210    000         011110    


Q ss_pred             ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                        ..++..+ .+......++++.+++++++|++.+.+. .++++++++|++.+.+++..||++++
T Consensus       275 --~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~  335 (338)
T PRK09422        275 --VLDGIEV-VGSLVGTRQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID  335 (338)
T ss_pred             --hhcCcEE-EEecCCCHHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence              1111122 1222234678999999999999876655 58999999999999999999999986

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=9.2e-36  Score=282.89  Aligned_cols=312  Identities=17%  Similarity=0.184  Sum_probs=236.9

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      +||++++...+++  ++++ +.|.|++.++||+|||.++|||++|++...|..                 ...+|.++||
T Consensus         7 ~~~a~~~~~~~~~--~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~-----------------~~~~p~v~G~   66 (373)
T cd08299           7 KCKAAVLWEPKKP--FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL-----------------VTPFPVILGH   66 (373)
T ss_pred             eeEEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC-----------------CCCCCccccc
Confidence            4889988876654  6788 899999999999999999999999999988751                 1346789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCce
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFS  140 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a  140 (383)
                      |++|+|+++|++++.+++||+|+++...                                             ...|+|+
T Consensus        67 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~  146 (373)
T cd08299          67 EAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFS  146 (373)
T ss_pred             cceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCccc
Confidence            9999999999999999999999875100                                             0248999


Q ss_pred             EEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q psy9949         141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTT  219 (383)
Q Consensus       141 ~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~  219 (383)
                      ||++++.+.++++|+++++++++.++++++|||+++...+++    +++++|+|+| +|++|++++++|+.+|+ +|+++
T Consensus       147 e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~----~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~  221 (373)
T cd08299         147 EYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKV----TPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAV  221 (373)
T ss_pred             ceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999999999999999999999999999998777888    9999999997 79999999999999999 89999


Q ss_pred             ecC-chHHHHHhcCCCeeeeCCChH--HHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCC
Q psy9949         220 CSG-DAKDLVTSLNPNLVIDYNEPE--AMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNT  294 (383)
Q Consensus       220 ~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~  294 (383)
                      +++ ++++.++++|+++++++.+.+  +.+.+.+  .+++|+++||+|++.....++..++.  ++|+++.+|.....  
T Consensus       222 ~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~--~~G~~v~~g~~~~~--  297 (373)
T cd08299         222 DINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHE--GYGVSVIVGVPPSS--  297 (373)
T ss_pred             cCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhcc--CCCEEEEEccCCCC--
Confidence            854 567888999999988876432  4444432  24799999999976543333133456  78999998642100  


Q ss_pred             CCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHH
Q psy9949         295 DSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKV  370 (383)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l  370 (383)
                                 ..+++....+     .++..+......  ...+.+.++++.+.++.+  ++++.++|+++++++|++.+
T Consensus       298 -----------~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~  361 (373)
T cd08299         298 -----------QNLSINPMLL-----LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLL  361 (373)
T ss_pred             -----------ceeecCHHHH-----hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHH
Confidence                       0011111111     111111111111  124567777777777754  44678899999999999999


Q ss_pred             hcCCCCCeEEEeC
Q psy9949         371 QQGHLRGKIILNA  383 (383)
Q Consensus       371 ~~~~~~gkvvl~~  383 (383)
                      .+++. .|+++.+
T Consensus       362 ~~~~~-~k~~~~~  373 (373)
T cd08299         362 RSGKS-IRTVLTF  373 (373)
T ss_pred             hCCCc-ceEEEeC
Confidence            87765 5888865

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=1.3e-35  Score=277.17  Aligned_cols=317  Identities=20%  Similarity=0.190  Sum_probs=236.4

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++..+++++.++++ +.|.|.+++++|+||+.++++|++|+....|..+               ....+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e   64 (325)
T cd05280           1 FKALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGG---------------VTRNYPHTPGID   64 (325)
T ss_pred             CceEEEcccCCCCcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCC---------------CCCCCCCccCcc
Confidence            789999998876678898 8999999999999999999999999998877521               113457789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee---cCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI---QPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~---~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      ++|+|+++  +++.+++||+|++..   +...+|+|++|++++.+.++++|+++++++++.+++.+.|||+++....+..
T Consensus        65 ~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  142 (325)
T cd05280          65 AAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNG  142 (325)
T ss_pred             cEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence            99999998  456799999999863   1122599999999999999999999999999999999999999987543221


Q ss_pred             ccCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHH-HHHhcCCCccEEEEc
Q psy9949         184 LVYP-RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAM-HSIAGAGPYDVILDA  260 (383)
Q Consensus       184 ~~~~-~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~-~~i~~~~g~d~v~d~  260 (383)
                      .  + .+++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|+++++++++.... .......++|+++|+
T Consensus       143 ~--~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd05280         143 Q--TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDT  220 (325)
T ss_pred             C--CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEEC
Confidence            0  3 35799999988999999999999999999988855 46678889999988876653211 111123479999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAV  338 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  338 (383)
                      +|+......  +++++  ++|+++.+|.......            .++... .+.++..+.+...  ....  ...+.+
T Consensus       221 ~~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~------------~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~  281 (325)
T cd05280         221 VGGDVLANL--LKQTK--YGGVVASCGNAAGPEL------------TTTVLP-FILRGVSLLGIDS--VNCPMELRKQVW  281 (325)
T ss_pred             CchHHHHHH--HHhhc--CCCEEEEEecCCCCcc------------ccccch-heeeeeEEEEEEe--ecCchhHHHHHH
Confidence            998665555  89999  9999999865321110            000000 0011222222111  0000  112445


Q ss_pred             HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.+.+++..+ +...+.++|++++++++++.+.+++..||+|++|
T Consensus       282 ~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         282 QKLATEWKPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHHHHhcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            6666666666 3345778999999999999999999999999986

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3.7e-36  Score=282.47  Aligned_cols=320  Identities=28%  Similarity=0.316  Sum_probs=247.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+|+++..+| +..++++ +++.|+++++||+||+.++++|++|+....+.                . ....|.++|||
T Consensus         1 m~a~~~~~~~-~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~----------------~-~~~~~~~~g~e   61 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYG----------------F-IPSYPAILGCD   61 (339)
T ss_pred             CceEEeccCC-CCccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeecc----------------c-ccCCCceeeee
Confidence            7899999887 6778888 89999999999999999999999999876553                1 12246789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC-----CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP-----HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA  181 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~-----~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~  181 (383)
                      ++|+|+.+|++++.+++||+|+++...     ..+|+|++|++++.+.++++|+++++++++.+++.+.|||+++....+
T Consensus        62 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~  141 (339)
T cd08249          62 FAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLG  141 (339)
T ss_pred             eeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhcccc
Confidence            999999999999999999999998631     225899999999999999999999999999999999999999875543


Q ss_pred             cC------ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC--CC
Q psy9949         182 LG------LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GP  253 (383)
Q Consensus       182 ~~------~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g  253 (383)
                      +.      ...+++++|+|+|++|++|++++++|+.+|++|++++++++.+.++++|++.++++.+.++.+.+.+.  ++
T Consensus       142 ~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~  221 (339)
T cd08249         142 LPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGK  221 (339)
T ss_pred             CCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCC
Confidence            30      01158899999998899999999999999999998887677888889999999998887777777543  57


Q ss_pred             ccEEEEcCCC-CcccccccccccccCC--CceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949         254 YDVILDAAGI-PLDQINSYLPFLKTGK--FSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF  330 (383)
Q Consensus       254 ~d~v~d~~g~-~~~~~~~~~~~l~~~~--~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (383)
                      +|+++|++|+ ......  +++++  +  +|+++.++......         .............   ..+.+. + ...
T Consensus       222 ~d~vl~~~g~~~~~~~~--~~~l~--~~~~g~~v~~g~~~~~~---------~~~~~~~~~~~~~---~~~~~~-~-~~~  283 (339)
T cd08249         222 LRYALDCISTPESAQLC--AEALG--RSGGGKLVSLLPVPEET---------EPRKGVKVKFVLG---YTVFGE-I-PED  283 (339)
T ss_pred             eeEEEEeeccchHHHHH--HHHHh--ccCCCEEEEecCCCccc---------cCCCCceEEEEEe---eeeccc-c-ccc
Confidence            9999999998 443444  89999  9  99999986432110         0000000000000   000000 0 000


Q ss_pred             EcCCHHHHHHHHHHHHcCCcccccceeec--CCCHHHHHHHHhcCC-CCCeEEEeC
Q psy9949         331 FMPIPYAVKEINKFIERGQIKPVIDSKYN--FCELPTAFEKVQQGH-LRGKIILNA  383 (383)
Q Consensus       331 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~--l~~~~~a~~~l~~~~-~~gkvvl~~  383 (383)
                      .......++++.++++++++.+.+...++  ++++++|++.+.+++ ..+|+|+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         284 REFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             ccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            01124678889999999999876666778  999999999999988 889999975

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.4e-35  Score=277.36  Aligned_cols=312  Identities=26%  Similarity=0.401  Sum_probs=247.4

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++ +..+.++ +.+.|.+.++|++||+.++++|++|+.+..|..+               .....|..+|||
T Consensus         1 m~a~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e   63 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWP---------------VKPKLPLIGGHE   63 (341)
T ss_pred             CceEEeeccC-CCCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCC---------------cCCCCCccCCcc
Confidence            7899999877 5568888 7899999999999999999999999998877511               113446789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee-------------------------cCCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI-------------------------QPHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++++.+++||+|+...                         +....|++++|+.++.+.++++|+++++++
T Consensus        64 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~  143 (341)
T cd08297          64 GAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQ  143 (341)
T ss_pred             cceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHH
Confidence            9999999999999999999998741                         001258999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      ++.++..+.|||+++.. .++    +++++|+|+|+++++|++++++|+.+|++|++++++ ++.+.++++|++.++++.
T Consensus       144 ~a~l~~~~~ta~~~~~~-~~~----~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~  218 (341)
T cd08297         144 AAPLLCAGVTVYKALKK-AGL----KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFK  218 (341)
T ss_pred             HHHHHcchHHHHHHHHh-cCC----CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCC
Confidence            99999999999999875 466    899999999988889999999999999999999865 456777889999999888


Q ss_pred             ChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949         241 EPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES  317 (383)
Q Consensus       241 ~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (383)
                      +.++.+++.+   ..++|+++|+.++....... +++++  ++|+++.++......   ..    .  ....+       
T Consensus       219 ~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~-~~~l~--~~g~~v~~g~~~~~~---~~----~--~~~~~-------  279 (341)
T cd08297         219 KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQA-LDYLR--PGGTLVCVGLPPGGF---IP----L--DPFDL-------  279 (341)
T ss_pred             CccHHHHHHHHhcCCCCCEEEEcCCchHHHHHH-HHHhh--cCCEEEEecCCCCCC---CC----C--CHHHH-------
Confidence            7777766654   35799999987765543333 88999  999999986421000   00    0  00111       


Q ss_pred             ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                        ..++..+. +......+++++++++++++.+.+.+ +.|++++++++++.+.++...||+++++
T Consensus       280 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         280 --VLRGITIV-GSLVGTRQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             --HhcccEEE-EeccCCHHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence              11222221 11222468899999999999987644 5799999999999999999999999985

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-35  Score=275.28  Aligned_cols=301  Identities=22%  Similarity=0.280  Sum_probs=237.6

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++.+.+ |..++++ +.+.|.++++||+||+.++++|+.|++...+.                    ..|.++|||
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~--------------------~~~~~~g~e   58 (305)
T cd08270           1 MRALVVDPDA-PLRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER--------------------PDGAVPGWD   58 (305)
T ss_pred             CeEEEEccCC-CceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC--------------------CCCCcccce
Confidence            6889998765 7778888 78999999999999999999999999876422                    125689999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|+++..|++||+|+++..   +|+|++|+.++.++++++|+++++++++.+++.+.|||+++.....     
T Consensus        59 ~~G~v~~~G~~v~~~~~Gd~V~~~~~---~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~-----  130 (305)
T cd08270          59 AAGVVERAAADGSGPAVGARVVGLGA---MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGP-----  130 (305)
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEecC---CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCC-----
Confidence            99999999999999999999999852   5999999999999999999999999999999999999999986554     


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .++++|+|+|+.|++|++++++|+..|++|++++++ ++.+.++++|++.+++...     .+.. +++|+++|++|+..
T Consensus       131 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~-~~~d~vl~~~g~~~  204 (305)
T cd08270         131 LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-----ELSG-APVDLVVDSVGGPQ  204 (305)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-----cccC-CCceEEEECCCcHH
Confidence            459999999988999999999999999999999864 5678888899876654322     1112 47999999999876


Q ss_pred             ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE---cCCHHHHHHHH
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF---MPIPYAVKEIN  342 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  342 (383)
                      ....  +++++  ++|+++.+|.... ...  ..  .    ...+..       ..++..+.....   ....+.+..++
T Consensus       205 ~~~~--~~~l~--~~G~~v~~g~~~~-~~~--~~--~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
T cd08270         205 LARA--LELLA--PGGTVVSVGSSSG-EPA--VF--N----PAAFVG-------GGGGRRLYTFFLYDGEPLAADLARLL  264 (305)
T ss_pred             HHHH--HHHhc--CCCEEEEEeccCC-Ccc--cc--c----HHHHhc-------ccccceEEEEEccCHHHHHHHHHHHH
Confidence            5555  99999  9999999864320 000  00  0    000100       001111111111   11256789999


Q ss_pred             HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ++++++++.+.+.++++++++++|++.+.+++..||+|++|
T Consensus       265 ~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         265 GLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999877788999999999999999999999999976

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=2e-35  Score=278.83  Aligned_cols=321  Identities=22%  Similarity=0.349  Sum_probs=245.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++..++.+  ++++ +.|.|+++++||+||+.++++|++|++...|..+.. .  +. +.........+|.++|||
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~-~--~~-~~~~~~~~~~~~~~~g~e   73 (350)
T cd08240           1 MKAAAVVEPGKP--LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLG-G--GK-TMSLDDRGVKLPLVLGHE   73 (350)
T ss_pred             CeeEEeccCCCC--ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCcc-c--cc-cccccccCCCCCcccccc
Confidence            789988877755  6788 789999999999999999999999999887741100 0  00 000000123456789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++++++||+|+++...                        ...|++++|+.++.+.++++|+++++.++
T Consensus        74 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~a  153 (350)
T cd08240          74 IVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALA  153 (350)
T ss_pred             eeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHe
Confidence            999999999999999999999876210                        13589999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      +.+.+.++|||+++.....+    +++++|+|+| +|++|++++|+|+.+|+ +|+++.++ ++.+.++++|++.+++++
T Consensus       154 a~l~~~~~tA~~~~~~~~~~----~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~  228 (350)
T cd08240         154 ATLACSGLTAYSAVKKLMPL----VADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS  228 (350)
T ss_pred             ehhhchhhhHHHHHHhcccC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC
Confidence            99999999999999877666    6899999996 89999999999999999 78888754 567788889998888877


Q ss_pred             ChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         241 EPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       241 ~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      +.++.+.+.+.  +++|++||++|+......+ +++++  ++|+++.++......        ..   ....  .     
T Consensus       229 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~~~--------~~---~~~~--~-----  287 (350)
T cd08240         229 DPDAAKRIIKAAGGGVDAVIDFVNNSATASLA-FDILA--KGGKLVLVGLFGGEA--------TL---PLPL--L-----  287 (350)
T ss_pred             CccHHHHHHHHhCCCCcEEEECCCCHHHHHHH-HHHhh--cCCeEEEECCCCCCC--------cc---cHHH--H-----
Confidence            76665555432  3799999999965443332 89999  999999986421100        00   0010  0     


Q ss_pred             cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                       ..++..+. +......+++.+++++++++.+++...+.|+++++++|++.+.+++..||++++
T Consensus       288 -~~~~~~i~-~~~~~~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         288 -PLRALTIQ-GSYVGSLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             -hhcCcEEE-EcccCCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence             11111221 222234578999999999999887777789999999999999999989999985

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.3e-35  Score=273.59  Aligned_cols=314  Identities=21%  Similarity=0.241  Sum_probs=243.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++.+.+.+..+.+. +.+.|.+.++||+||+.++++|++|+....|.                ......|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~----------------~~~~~~~~~~g~e   63 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGH----------------SPSVKFPRVLGIE   63 (320)
T ss_pred             CeEEEEcCCCCccceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCC----------------CCCCCCCccccce
Confidence            688899887776677887 77888899999999999999999999988775                1123457889999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      ++|+|+++|.  ..+++||+|+++..   ...+|+|++|+.++.+.++++|+++++++++.+++++.|||+++.....+ 
T Consensus        64 ~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-  140 (320)
T cd08243          64 AVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGL-  140 (320)
T ss_pred             eEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCC-
Confidence            9999999995  57999999998852   12348999999999999999999999999999999999999999877777 


Q ss_pred             ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC-CCccEEEEcC
Q psy9949         184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA-GPYDVILDAA  261 (383)
Q Consensus       184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~-~g~d~v~d~~  261 (383)
                         +++++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++.+++. ..++.+.+.+. .++|+++|++
T Consensus       141 ---~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~~~~~d~vl~~~  216 (320)
T cd08243         141 ---QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAAPGGFDKVLELV  216 (320)
T ss_pred             ---CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHhCCCceEEEECC
Confidence               899999999999999999999999999999999855 45677888999888754 44555555543 5799999999


Q ss_pred             CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHH
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEI  341 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (383)
                      |+......  +++++  ++|+++.+|........ .    .  ...........  .....+..    ......+.++++
T Consensus       217 ~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~~-~----~--~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~  279 (320)
T cd08243         217 GTATLKDS--LRHLR--PGGIVCMTGLLGGQWTL-E----D--FNPMDDIPSGV--NLTLTGSS----SGDVPQTPLQEL  279 (320)
T ss_pred             ChHHHHHH--HHHhc--cCCEEEEEccCCCCccc-C----C--cchhhhhhhcc--ceEEEecc----hhhhhHHHHHHH
Confidence            98654544  89999  99999998643111000 0    0  00111110000  11111110    001124578889


Q ss_pred             HHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         342 NKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       342 ~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      +++++++.+++.+.+.|+++++++|++.+.+++..||+|+
T Consensus       280 ~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         280 FDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            9999999998777789999999999999998888899886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-35  Score=277.87  Aligned_cols=312  Identities=22%  Similarity=0.268  Sum_probs=245.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||||++.+++.+  +.++ +.+.|.+.+++|+||+.++++|++|+....|..                ....+|.++|+|
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~----------------~~~~~~~~~g~e   61 (345)
T cd08260           1 MRAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHD----------------PDVTLPHVPGHE   61 (345)
T ss_pred             CeeEEEecCCCC--cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCC----------------CCCCCCeeeccc
Confidence            799999987765  7777 789999999999999999999999999888761                123457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEe----------e--------------cCCCCCCceEEEeecCc--ccccCCCCCCHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGV----------I--------------QPHKQGSFSKLILADSA--LVHKKPSNISDE  160 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~----------~--------------~~~~~g~~a~~~~v~~~--~~~~ip~~~~~~  160 (383)
                      ++|+|+++|+++..|++||+|++.          +              +...+|+|++|++++..  .++++|++++++
T Consensus        62 ~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~  141 (345)
T cd08260          62 FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFV  141 (345)
T ss_pred             eeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHH
Confidence            999999999999999999999861          0              01125999999999974  999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      +++.++.+++|||+++....++    +++++|+|+| +|++|++++++|+..|++|++++++ ++.+.++++|++.++++
T Consensus       142 ~aa~l~~~~~ta~~~l~~~~~~----~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~  216 (345)
T cd08260         142 TAAGLGCRFATAFRALVHQARV----KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNA  216 (345)
T ss_pred             HhhhhccchHHHHHHHHHccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEcc
Confidence            9999999999999999777787    8999999999 8999999999999999999999854 56778888999999988


Q ss_pred             CC-hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NE-PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~-~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      +. .++.+.+...  +++|++||++|+....... +++++  ++|+++.+|........          ..+++... +.
T Consensus       217 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~-~~~l~--~~g~~i~~g~~~~~~~~----------~~~~~~~~-~~  282 (345)
T cd08260         217 SEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNS-VASLR--KRGRHVQVGLTLGEEAG----------VALPMDRV-VA  282 (345)
T ss_pred             ccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHH-HHHhh--cCCEEEEeCCcCCCCCc----------cccCHHHH-hh
Confidence            87 6666665532  2799999999864433332 88999  99999998643211100          00011000 00


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccc--cceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPV--IDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +...+.+      ......+.+++++++++++++.+.  +.+.++++++++|++.+.+++..||+|++
T Consensus       283 ~~~~~~~------~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         283 RELEIVG------SHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             cccEEEe------CCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            1111111      112346789999999999988753  57889999999999999999999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.8e-35  Score=276.44  Aligned_cols=320  Identities=22%  Similarity=0.206  Sum_probs=232.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+.|++..+.++ +.+.|.+.++||+||+.++++|++|.....+.+.               ....+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e   64 (326)
T cd08289           1 FQALVVEKDEDDVSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK---------------IVKRYPFIPGID   64 (326)
T ss_pred             CeeEEEeccCCcceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc---------------ccCCCCcCcccc
Confidence            789999998887778888 8999999999999999999999999876643210               113457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      ++|+|+++|  +.+|++||+|++...   ...+|+|++|+.++.+.++++|+++++++++.++++++|||+++....+..
T Consensus        65 ~~G~V~~~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~  142 (326)
T cd08289          65 LAGTVVESN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENG  142 (326)
T ss_pred             eeEEEEEcC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence            999999964  567999999998741   113599999999999999999999999999999999999999986443310


Q ss_pred             ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc--CCCccEEEEc
Q psy9949         184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYDVILDA  260 (383)
Q Consensus       184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d~v~d~  260 (383)
                      . ..++++|+|+|++|++|++++++|+.+|++|++++++ ++.++++++|++.++++++. ..+.+..  ..++|+++|+
T Consensus       143 ~-~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~d~vld~  220 (326)
T cd08289         143 L-TPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPLEKQRWAGAVDP  220 (326)
T ss_pred             C-CCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhhccCCcCEEEEC
Confidence            0 0357899999988999999999999999999999854 56788889999888887654 2333333  2479999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE  340 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (383)
                      +|+......  +++++  ++|+++.+|......   .    ..  ....+..    +...+.+............+.+..
T Consensus       221 ~g~~~~~~~--~~~l~--~~G~~i~~g~~~~~~---~----~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  283 (326)
T cd08289         221 VGGKTLAYL--LSTLQ--YGGSVAVSGLTGGGE---V----ET--TVFPFIL----RGVNLLGIDSVECPMELRRRIWRR  283 (326)
T ss_pred             CcHHHHHHH--HHHhh--cCCEEEEEeecCCCC---C----Cc--chhhhhh----ccceEEEEEeEecCchHHHHHHHH
Confidence            998655554  89999  999999996431100   0    00  0000101    122222211100000111233344


Q ss_pred             HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +...+....+...+.++|+++++++||+.+.+++..||+|+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         284 LATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             HHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            4333332333335688999999999999999999999999875

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=3.9e-35  Score=273.78  Aligned_cols=316  Identities=21%  Similarity=0.239  Sum_probs=236.4

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      ||+++...+.++.++++ +.|.|.+.+++|+||+.++++|++|+....|..+               ....+|..+|||+
T Consensus         1 ~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e~   64 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG---------------VVRSYPMIPGIDA   64 (323)
T ss_pred             CeEEEccCCCCcceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC---------------CCCCCCccceeee
Confidence            57888887877788999 8999999999999999999999999998877511               1124578899999


Q ss_pred             eEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh--c
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA--L  182 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~--~  182 (383)
                      +|+|++  .++..|++||+|+++..   ...+|+|++|+.++.+.++++|+++++++++.+++.+.+||+++....+  +
T Consensus        65 ~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~  142 (323)
T TIGR02823        65 AGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGL  142 (323)
T ss_pred             EEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCC
Confidence            999998  56678999999998741   1125899999999999999999999999999999999999988764433  5


Q ss_pred             CccCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         183 GLVYPRDK-RVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       183 ~~~~~~~~-~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                          .+++ +|+|+|++|++|++++++|+.+|++++++++ .++.+.++++|++.+++.++.+..-.....+++|+++||
T Consensus       143 ----~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~  218 (323)
T TIGR02823       143 ----TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDT  218 (323)
T ss_pred             ----CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEEC
Confidence                7888 9999998899999999999999999888874 455678889999888877654431111122359999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE  340 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (383)
                      +|+......  +++++  ++|+++.+|......   .    ..  ....+...    ...+.+............+.+..
T Consensus       219 ~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~---~----~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  281 (323)
T TIGR02823       219 VGGHTLANV--LAQLK--YGGAVAACGLAGGPD---L----PT--TVLPFILR----GVSLLGIDSVYCPMALREAAWQR  281 (323)
T ss_pred             ccHHHHHHH--HHHhC--CCCEEEEEcccCCCC---c----cc--cHHHHhhc----ceEEEEEeccccCchhHHHHHHH
Confidence            998765444  89999  999999996431100   0    00  00011111    11222211100000111345667


Q ss_pred             HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.+++..+.+... .+.|+++++++|++.+.+++..||+|+++
T Consensus       282 ~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       282 LATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            7777888887655 45899999999999999999999999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=2.5e-35  Score=275.77  Aligned_cols=318  Identities=22%  Similarity=0.293  Sum_probs=245.0

Q ss_pred             ceeeEEEeecCC--CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          26 RTAAWQISSYGG--ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        26 ~~~a~~~~~~g~--~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      .|||+++.+++.  ++.++++ +.+.|.+.++||+|||.++|+|++|+....|...               ....+|.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~---------------~~~~~p~~~   64 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYD---------------PGVKPPFDC   64 (329)
T ss_pred             CceEEEeccCCCCcccCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCC---------------CCCCCCccc
Confidence            489999999887  6778899 7899999999999999999999999998877511               123568899


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      |||++|+|+++|++++++++||+|+++.    .|+|++|+.++.+.++++|+.  +.+++.++.++.|||+++.+..++ 
T Consensus        65 g~e~~G~v~~vG~~v~~~~~Gd~V~~~~----~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~-  137 (329)
T cd08250          65 GFEGVGEVVAVGEGVTDFKVGDAVATMS----FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEM-  137 (329)
T ss_pred             CceeEEEEEEECCCCCCCCCCCEEEEec----CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCC-
Confidence            9999999999999999999999999986    499999999999999999997  356778889999999999877888 


Q ss_pred             ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEc
Q psy9949         184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDA  260 (383)
Q Consensus       184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~  260 (383)
                         +++++|+|+|++|++|++++++|+..|++|++++++ ++.+.++++|++.+++.+..++.+.+...  .++|++||+
T Consensus       138 ---~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~  214 (329)
T cd08250         138 ---KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYES  214 (329)
T ss_pred             ---CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEEC
Confidence               999999999999999999999999999999999865 45677788999888887776665555432  479999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcC----CHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP----IPY  336 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  336 (383)
                      +|+......  +++++  ++|+++.++........ .+.. ......+..       ....++..+.......    ..+
T Consensus       215 ~g~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~~-~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  281 (329)
T cd08250         215 VGGEMFDTC--VDNLA--LKGRLIVIGFISGYQSG-TGPS-PVKGATLPP-------KLLAKSASVRGFFLPHYAKLIPQ  281 (329)
T ss_pred             CcHHHHHHH--HHHhc--cCCeEEEEecccCCccc-Cccc-ccccccccH-------HHhhcCceEEEEEhHHHHHHHHH
Confidence            997554444  89999  99999998643211000 0000 000000000       0011122221111110    245


Q ss_pred             HHHHHHHHHHcCCcccc--cceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         337 AVKEINKFIERGQIKPV--IDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       337 ~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      .+.+++++++++.+++.  +.+.++++++++|++.+.+++..||++++
T Consensus       282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         282 HLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            67889999999988763  45569999999999999988888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.1e-35  Score=275.54  Aligned_cols=314  Identities=19%  Similarity=0.264  Sum_probs=235.4

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++..++   .++++ +.+.|++.+++|+||+.+++||++|+....|....+    .. .  .......+|.++|||
T Consensus         1 mka~~~~~~~---~~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~----~~-~--~~~~~~~~p~~~g~e   69 (350)
T cd08256           1 MRAVVCHGPQ---DYRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFW----GD-E--NQPPYVKPPMIPGHE   69 (350)
T ss_pred             CeeEEEecCC---ceEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccc----cc-c--ccCccCCCCcccCcc
Confidence            6899998655   37888 899999999999999999999999999887751000    00 0  000112457789999


Q ss_pred             eeEEEEecCCCCC--CCCCCCEEEEeec--------------------------CCCCCCceEEEeecCc-ccccCCCCC
Q psy9949         107 FCGKIVAKGPRVT--DLNIDDVVYGVIQ--------------------------PHKQGSFSKLILADSA-LVHKKPSNI  157 (383)
Q Consensus       107 ~~G~Vv~vG~~v~--~~~~Gd~V~~~~~--------------------------~~~~g~~a~~~~v~~~-~~~~ip~~~  157 (383)
                      ++|+|+++|++++  +|++||+|++...                          ....|+|++|+.++.+ .++++|+++
T Consensus        70 ~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~  149 (350)
T cd08256          70 FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDI  149 (350)
T ss_pred             eeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCC
Confidence            9999999999998  8999999987210                          0135999999999987 678999999


Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      ++++++.+ .++.|+|+++ +..++    +++++|+|.| +|++|++++++|+.+|++ +++++++ ++.++++++|++.
T Consensus       150 ~~~~aa~~-~~~~ta~~a~-~~~~~----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~  222 (350)
T cd08256         150 PPEDAILI-EPLACALHAV-DRANI----KFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADV  222 (350)
T ss_pred             CHHHHhhh-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcE
Confidence            99999988 7889999998 57888    8999999955 899999999999999985 5566644 4567778899998


Q ss_pred             eeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949         236 VIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK  312 (383)
Q Consensus       236 v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (383)
                      +++++..++.+.+.+.   .++|++||++|+....... +++++  ++|+++.++.....        ..     +.+..
T Consensus       223 v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~--------~~-----~~~~~  286 (350)
T cd08256         223 VLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQG-LNMIR--KLGRFVEFSVFGDP--------VT-----VDWSI  286 (350)
T ss_pred             EecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEccCCCC--------Cc-----cChhH
Confidence            8888776676666543   4699999999975433332 88999  99999998642100        00     01110


Q ss_pred             hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      ..     ..++..+. + .......+.+++++++++.+++  .+.+.|+++++++|++.+++++..+|+++
T Consensus       287 ~~-----~~~~~~i~-~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         287 IG-----DRKELDVL-G-SHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             hh-----cccccEEE-E-eccCchhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            00     01111111 1 1122457888999999999976  36889999999999999999888889874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=6.2e-35  Score=272.32  Aligned_cols=310  Identities=21%  Similarity=0.260  Sum_probs=243.1

Q ss_pred             eecCCCc--eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEE
Q psy9949          33 SSYGGAD--ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGK  110 (383)
Q Consensus        33 ~~~g~~~--~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~  110 (383)
                      ++++.+.  .+.++ +.+.|++.+++|+|||+++++|+.|+....|..+               .....|.++|||++|+
T Consensus         4 ~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~e~~G~   67 (323)
T cd05282           4 TQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYG---------------SRPPLPAVPGNEGVGV   67 (323)
T ss_pred             CcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCC---------------CCCCCCCcCCcceEEE
Confidence            4455554  68888 7889999999999999999999999998876511               1123578999999999


Q ss_pred             EEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCC
Q psy9949         111 IVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDK  190 (383)
Q Consensus       111 Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~  190 (383)
                      |+++|++++++++||+|+++..   .|+|++|+.++.+.++++|+++++.+++.+++.+++||+++...+.+    ++++
T Consensus        68 v~~~G~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~----~~~~  140 (323)
T cd05282          68 VVEVGSGVSGLLVGQRVLPLGG---EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKL----PPGD  140 (323)
T ss_pred             EEEeCCCCCCCCCCCEEEEeCC---CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccC----CCCC
Confidence            9999999999999999999862   39999999999999999999999999999999999999999877777    8999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLD  266 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~  266 (383)
                      +|+|+|++|++|++++++|+.+|+++++++++ ++.+.++++|++.++++.+.++...+..   ..++|+++||+|+...
T Consensus       141 ~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~  220 (323)
T cd05282         141 WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESA  220 (323)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHH
Confidence            99999988999999999999999999998855 4667788899999998887677766653   3479999999998776


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE----EcCCHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF----FMPIPYAVKEIN  342 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  342 (383)
                      ...  +++++  ++|+++.++..... .  ..+.      ...+...    ...+.+.......    .....+.+.+++
T Consensus       221 ~~~--~~~l~--~~g~~v~~g~~~~~-~--~~~~------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (323)
T cd05282         221 TRL--ARSLR--PGGTLVNYGLLSGE-P--VPFP------RSVFIFK----DITVRGFWLRQWLHSATKEAKQETFAEVI  283 (323)
T ss_pred             HHH--HHhhC--CCCEEEEEccCCCC-C--CCCC------HHHHhhc----CceEEEEEehHhhccCCHHHHHHHHHHHH
Confidence            554  89999  99999998642211 0  0000      0001101    1111111100000    001135788899


Q ss_pred             HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ++++++++.+...+.|+++++++|++.+.+++..||+|++
T Consensus       284 ~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         284 KLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            9999999987778899999999999999988888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.1e-34  Score=273.57  Aligned_cols=307  Identities=19%  Similarity=0.239  Sum_probs=240.1

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      ||++++.+++.   +.+. +.|.|.+ .++||+|||.++++|++|+....|.                .....+|.++|+
T Consensus         1 ~ka~~~~~~~~---~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g~   60 (347)
T cd05278           1 MKALVYLGPGK---IGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGG----------------VPGAKHGMILGH   60 (347)
T ss_pred             CceEEEecCCc---eEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCC----------------CCCCCCCceecc
Confidence            67888887654   6778 7899989 8999999999999999999988775                122456789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeec---------------------------CCCCCCceEEEeecCc--ccccCCCC
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------PHKQGSFSKLILADSA--LVHKKPSN  156 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~g~~a~~~~v~~~--~~~~ip~~  156 (383)
                      |++|+|+++|++++++++||+|++...                           ...+|+|++|++++.+  +++++|++
T Consensus        61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~  140 (347)
T cd05278          61 EFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDG  140 (347)
T ss_pred             ceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCC
Confidence            999999999999999999999987311                           0225899999999987  99999999


Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      +++++++.++.+++|||+++ ...++    +++++|+|.| +|++|++++|+|+.+|+ +++++.++ ++.++++++|++
T Consensus       141 ~~~~~aa~l~~~~~ta~~~~-~~~~~----~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~  214 (347)
T cd05278         141 LPDEDALMLSDILPTGFHGA-ELAGI----KPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGAT  214 (347)
T ss_pred             CCHHHHhhhcchhhheeehh-hhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCc
Confidence            99999999999999999998 47777    8999999976 79999999999999997 88888644 456778889999


Q ss_pred             eeeeCCChHHHHHHhc---CCCccEEEEcCCCC-cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949         235 LVIDYNEPEAMHSIAG---AGPYDVILDAAGIP-LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL  310 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~-~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (383)
                      .++++++.++.+.+..   ..++|++||++|+. .....  +++++  ++|+++.++...... .      . .. ....
T Consensus       215 ~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~--~~~l~--~~G~~v~~g~~~~~~-~------~-~~-~~~~  281 (347)
T cd05278         215 DIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQA--VKVVR--PGGTIANVGVYGKPD-P------L-PL-LGEW  281 (347)
T ss_pred             EEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHH--HHHhh--cCCEEEEEcCCCCCc-c------c-Cc-cchh
Confidence            9998888777776654   25799999999874 33444  88999  999999885321000 0      0 00 0000


Q ss_pred             hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccc--cceeecCCCHHHHHHHHhcCCC-CCeEEEe
Q psy9949         311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPV--IDSKYNFCELPTAFEKVQQGHL-RGKIILN  382 (383)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~  382 (383)
                               ..++..+. +...+..+.+++++++++++.+++.  +...|+++++++|++.+..++. .+|+|++
T Consensus       282 ---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         282 ---------FGKNLTFK-TGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             ---------hhceeEEE-eeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence                     01111211 1112236789999999999998763  5678999999999999988877 6798875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.3e-34  Score=272.78  Aligned_cols=308  Identities=17%  Similarity=0.254  Sum_probs=238.1

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      ||++++.+++.   ++++ +.+.|+| .++||+||++++++|++|+....|..                ....+|.++||
T Consensus         1 m~a~~~~~~~~---~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~----------------~~~~~~~~~g~   60 (345)
T cd08286           1 MKALVYHGPGK---ISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDV----------------PTVTPGRILGH   60 (345)
T ss_pred             CceEEEecCCc---eeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCC----------------CCCCCCceecc
Confidence            68899987664   7888 7899886 79999999999999999999988861                22344789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCc--ccccCCCCCC
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSA--LVHKKPSNIS  158 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~--~~~~ip~~~~  158 (383)
                      |++|+|+++|++++.+++||+|++...                         ...+|+|++|+.++.+  .++++|++++
T Consensus        61 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~  140 (345)
T cd08286          61 EGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVD  140 (345)
T ss_pred             cceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCC
Confidence            999999999999999999999987531                         0124899999999987  8999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcCCCee
Q psy9949         159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLNPNLV  236 (383)
Q Consensus       159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg~~~v  236 (383)
                      ..+++.++++++|||+++....++    +++++|+|.| +|++|++++|+|+.+| .+|+++.++ ++.++++++|++.+
T Consensus       141 ~~~aa~l~~~~~ta~~~~~~~~~~----~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~  215 (345)
T cd08286         141 EEAAVMLSDILPTGYECGVLNGKV----KPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHT  215 (345)
T ss_pred             HHHhhhccchhHHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCce
Confidence            999999999999999987767777    8999999987 6999999999999999 688887654 45677889999999


Q ss_pred             eeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949         237 IDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS  313 (383)
Q Consensus       237 ~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (383)
                      ++++..++.+.+.+   ..++|++||++|........ +++++  ++|+++.+|.....    .         .++... 
T Consensus       216 v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~~----~---------~~~~~~-  278 (345)
T cd08286         216 VNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELC-QELVA--PGGHIANVGVHGKP----V---------DLHLEK-  278 (345)
T ss_pred             eccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHhcc--CCcEEEEecccCCC----C---------CcCHHH-
Confidence            98877666665543   34799999999875543332 68899  99999998642100    0         011111 


Q ss_pred             hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCC--CCeEEEeC
Q psy9949         314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHL--RGKIILNA  383 (383)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~--~gkvvl~~  383 (383)
                           ...++..+...  ....+.+++++++++++.+++  ++.++|++++++++++.+.+...  ..|++|++
T Consensus       279 -----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         279 -----LWIKNITITTG--LVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             -----HhhcCcEEEee--cCchhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence                 01122222111  112367888999999998865  36789999999999999987642  34999874

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=2.2e-34  Score=270.14  Aligned_cols=315  Identities=26%  Similarity=0.350  Sum_probs=243.0

Q ss_pred             eeeEEEeecCCCc---eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          27 TAAWQISSYGGAD---ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        27 ~~a~~~~~~g~~~---~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      ||++++++++++.   .+.++ +.+.|++.+++|+||+.++++|++|+....+.                .+...+|.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~----------------~~~~~~~~~~   63 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGG----------------APVPGQPKIL   63 (336)
T ss_pred             CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCC----------------CCCCCCCccc
Confidence            6899999988775   47777 78888999999999999999999999887664                1123356789


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      |||++|+|+++|+++..|++||+|+++.....+|+|++|+.++.++++++|+++++++++.+++.+.|||+++.+.+.+ 
T Consensus        64 g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~-  142 (336)
T cd08252          64 GWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGI-  142 (336)
T ss_pred             ccceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCC-
Confidence            9999999999999999999999999874222369999999999999999999999999999999999999998777777 


Q ss_pred             ccCCC-----CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCc
Q psy9949         184 LVYPR-----DKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPY  254 (383)
Q Consensus       184 ~~~~~-----~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~  254 (383)
                         ++     +++|+|+|++|++|++++++|+.+| ++|++++++ ++.++++++|++.++++.. ++.+++...  .++
T Consensus       143 ---~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~  218 (336)
T cd08252         143 ---SEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPV  218 (336)
T ss_pred             ---CCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCC
Confidence               66     9999999999999999999999999 899999855 5677888899998888764 455555432  479


Q ss_pred             cEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEE-E-EEc
Q psy9949         255 DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW-G-FFM  332 (383)
Q Consensus       255 d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~  332 (383)
                      |+++|++|+....... +++++  ++|+++.++...      ......      .+..    +...+.+..... . ...
T Consensus       219 d~vl~~~~~~~~~~~~-~~~l~--~~g~~v~~g~~~------~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~  279 (336)
T cd08252         219 DYIFCLTDTDQHWDAM-AELIA--PQGHICLIVDPQ------EPLDLG------PLKS----KSASFHWEFMFTRSMFQT  279 (336)
T ss_pred             CEEEEccCcHHHHHHH-HHHhc--CCCEEEEecCCC------Ccccch------hhhc----ccceEEEEEeeccccccc
Confidence            9999999964443332 88999  999999986421      000000      0000    011111110000 0 000


Q ss_pred             ----CCHHHHHHHHHHHHcCCcccccc---eeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         333 ----PIPYAVKEINKFIERGQIKPVID---SKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       333 ----~~~~~~~~~~~l~~~g~l~~~~~---~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                          ...+.++++++++.+|.+.+.+.   +.++++++++|++.+.++...||++++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         280 PDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             cchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence                12356889999999999886533   347999999999999999989999875

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-34  Score=272.51  Aligned_cols=315  Identities=20%  Similarity=0.264  Sum_probs=233.6

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++..+    .++++ +.+.|++++++|+|||.++++|++|+....|.... .+-.+. .   ......+|.++|+|
T Consensus         1 m~a~~~~~~----~~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~-~~~~~~-~---~~~~~~~~~~~g~e   70 (341)
T cd08262           1 MRAAVFRDG----PLVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAM-VDDAGG-P---SLMDLGADIVLGHE   70 (341)
T ss_pred             CceEEEeCC----ceEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcc-cccccc-c---ccccCCCCcccccc
Confidence            688888754    47888 89999999999999999999999999988773100 000000 0   00112357889999


Q ss_pred             eeEEEEecCCCCCC-CCCCCEEEEeecC--------------CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHH
Q psy9949         107 FCGKIVAKGPRVTD-LNIDDVVYGVIQP--------------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLT  171 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~-~~~Gd~V~~~~~~--------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~t  171 (383)
                      ++|+|+++|+++++ |++||+|+++...              ..+|+|++|++++.+.++++|+++++++++ ++.++.+
T Consensus        71 ~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~  149 (341)
T cd08262          71 FCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAV  149 (341)
T ss_pred             eeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHH
Confidence            99999999999987 9999999987210              135999999999999999999999999887 6678889


Q ss_pred             HHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec-CchHHHHHhcCCCeeeeCCChHHHH---
Q psy9949         172 AWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMH---  246 (383)
Q Consensus       172 A~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~---  246 (383)
                      ||+++ ..+++    +++++|+|+| +|++|.+++|+|+.+|++ ++++.+ +++.++++++|++++++++..+...   
T Consensus       150 a~~~~-~~~~~----~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~  223 (341)
T cd08262         150 GLHAV-RRARL----TPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA  223 (341)
T ss_pred             HHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH
Confidence            99986 57888    9999999997 699999999999999996 555553 4466788899998888877642211   


Q ss_pred             HH---hcCCCccEEEEcCCCC-cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccC
Q psy9949         247 SI---AGAGPYDVILDAAGIP-LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK  322 (383)
Q Consensus       247 ~i---~~~~g~d~v~d~~g~~-~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (383)
                      .+   ....++|+++|++|+. .....  +++++  ++|+++.++......        ...  ....         ..+
T Consensus       224 ~~~~~~~~~~~d~vid~~g~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~--------~~~--~~~~---------~~~  280 (341)
T cd08262         224 AELARAGGPKPAVIFECVGAPGLIQQI--IEGAP--PGGRIVVVGVCMESD--------NIE--PALA---------IRK  280 (341)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHH--HHHhc--cCCEEEEECCCCCCC--------ccC--HHHH---------hhc
Confidence            12   2234799999999874 33333  88999  999999986431110        000  0000         111


Q ss_pred             CccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         323 TNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +..+. .......+.+.++++++++|.+.+  .+.+.+++++++++++.+.+++..||+|++
T Consensus       281 ~~~~~-~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         281 ELTLQ-FSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             ceEEE-EEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            11221 122334668899999999999875  457899999999999999999999999975

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.9e-34  Score=270.84  Aligned_cols=306  Identities=21%  Similarity=0.324  Sum_probs=239.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++++++   .+.++ +.+.|+++++||+|||.++++|+.|+.+..|..                ....+|.++|+|
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~----------------~~~~~~~~~g~e   60 (337)
T cd08261           1 MKALVCEKPG---RLEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRN----------------PFASYPRILGHE   60 (337)
T ss_pred             CeEEEEeCCC---ceEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCC----------------CcCCCCcccccc
Confidence            6888888654   47788 789999999999999999999999999887751                122447789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++.|++||+|++...                        ....|+|++|+.++.+ ++++|++++++++
T Consensus        61 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~a  139 (337)
T cd08261          61 LSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQA  139 (337)
T ss_pred             cEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHh
Confidence            99999999999999999999987310                        0125999999999999 9999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      +.+ ..++++++++ ...++    +++++|||+| +|++|.+++++|+.+|++|+++.++ ++.++++++|++++++++.
T Consensus       140 a~~-~~~~~a~~~~-~~~~l----~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~  212 (337)
T cd08261         140 ALV-EPLAIGAHAV-RRAGV----TAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGD  212 (337)
T ss_pred             hhh-chHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcc
Confidence            877 5677888888 57888    8999999996 7999999999999999999999744 4567788899999999887


Q ss_pred             hHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         242 PEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       242 ~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      .++.+.+...   .++|+++|++|+....... +++++  ++|+++.++... ..   ...  .  .  ..+....+   
T Consensus       213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~-~~~l~--~~G~~i~~g~~~-~~---~~~--~--~--~~~~~~~~---  276 (337)
T cd08261         213 EDVAARLRELTDGEGADVVIDATGNPASMEEA-VELVA--HGGRVVLVGLSK-GP---VTF--P--D--PEFHKKEL---  276 (337)
T ss_pred             cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEcCCC-CC---Ccc--C--H--HHHHhCCC---
Confidence            7777766543   4699999999875443332 88999  999999886432 00   000  0  0  01111111   


Q ss_pred             cccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcC-CCCCeEEEeC
Q psy9949         319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQG-HLRGKIILNA  383 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~-~~~gkvvl~~  383 (383)
                            .+. +......+.+++++++++++.+++  .+..++++++++++++.+.++ ...+|+|+++
T Consensus       277 ------~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         277 ------TIL-GSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             ------EEE-EeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence                  111 111234678899999999999987  677889999999999999988 4778999874

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.9e-34  Score=275.28  Aligned_cols=308  Identities=20%  Similarity=0.243  Sum_probs=237.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      |||+++..+   +.++++ +.+.|.+. +++|+||+.+++||++|+....|..                ...++|.++||
T Consensus         1 m~a~~~~~~---~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~----------------~~~~~p~~~G~   60 (386)
T cd08283           1 MKALVWHGK---GDVRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYI----------------PGMKKGDILGH   60 (386)
T ss_pred             CeeEEEecC---CCceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCC----------------CCCCCCccccc
Confidence            788998754   457888 78999884 9999999999999999999988861                12345789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecC--------------------------------------------CCCCCceE
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP--------------------------------------------HKQGSFSK  141 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--------------------------------------------~~~g~~a~  141 (383)
                      |++|+|+++|++++++++||+|++....                                            ..+|+|++
T Consensus        61 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  140 (386)
T cd08283          61 EFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAE  140 (386)
T ss_pred             cceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEE
Confidence            9999999999999999999999875310                                            12589999


Q ss_pred             EEeecCc--ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEE
Q psy9949         142 LILADSA--LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVT  218 (383)
Q Consensus       142 ~~~v~~~--~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~  218 (383)
                      |++++.+  .++++|+++++++++.++..++|||+++ ...++    +++++|+|+| +|++|++++++|+..|+ +|++
T Consensus       141 ~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~----~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~  214 (386)
T cd08283         141 YVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEV----KPGDTVAVWG-CGPVGLFAARSAKLLGAERVIA  214 (386)
T ss_pred             EEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEE
Confidence            9999987  8999999999999999999999999999 57888    8999999997 79999999999999998 6999


Q ss_pred             EecC-chHHHHHhcCCCeeeeCCCh-HHHHHHhcC---CCccEEEEcCCCCc---------------------ccccccc
Q psy9949         219 TCSG-DAKDLVTSLNPNLVIDYNEP-EAMHSIAGA---GPYDVILDAAGIPL---------------------DQINSYL  272 (383)
Q Consensus       219 ~~~~-~~~~~~~~lg~~~v~~~~~~-~~~~~i~~~---~g~d~v~d~~g~~~---------------------~~~~~~~  272 (383)
                      ++++ ++.+++++++...++++... ++.+.+.+.   .++|++||++|+..                     .... .+
T Consensus       215 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  293 (386)
T cd08283         215 IDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALRE-AI  293 (386)
T ss_pred             EcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHH-HH
Confidence            8854 56788888844467777765 366666543   37999999998642                     1122 27


Q ss_pred             cccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc
Q psy9949         273 PFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP  352 (383)
Q Consensus       273 ~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  352 (383)
                      ++++  ++|+++.++.....            ...++... .     ..++..+. +......+.+.+++++++++++.+
T Consensus       294 ~~l~--~~G~iv~~g~~~~~------------~~~~~~~~-~-----~~~~~~i~-~~~~~~~~~~~~~~~~l~~g~l~~  352 (386)
T cd08283         294 QAVR--KGGTVSIIGVYGGT------------VNKFPIGA-A-----MNKGLTLR-MGQTHVQRYLPRLLELIESGELDP  352 (386)
T ss_pred             HHhc--cCCEEEEEcCCCCC------------cCccCHHH-H-----HhCCcEEE-eccCCchHHHHHHHHHHHcCCCCh
Confidence            8899  99999998642110            00001100 0     11111111 111223678899999999999876


Q ss_pred             --ccceeecCCCHHHHHHHHhcCC-CCCeEEEe
Q psy9949         353 --VIDSKYNFCELPTAFEKVQQGH-LRGKIILN  382 (383)
Q Consensus       353 --~~~~~~~l~~~~~a~~~l~~~~-~~gkvvl~  382 (383)
                        ++.+.|+++++++|++.+.+++ ..+|+||+
T Consensus       353 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         353 SFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             hHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence              3568899999999999998877 45899986

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.2e-34  Score=273.90  Aligned_cols=316  Identities=19%  Similarity=0.222  Sum_probs=236.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      ||++++.+++   .++++ ++|.|++ +++||+|||.+++||++|++...|..                . ..+|.++||
T Consensus         1 m~~~~~~~~~---~~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~----------------~-~~~p~~~g~   59 (375)
T cd08282           1 MKAVVYGGPG---NVAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRT----------------G-AEPGLVLGH   59 (375)
T ss_pred             CceEEEecCC---ceeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCC----------------C-CCCCceecc
Confidence            6788887654   47888 7899986 79999999999999999999988751                1 345789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEe-------ec---------------------------CCCCCCceEEEeecCc--c
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGV-------IQ---------------------------PHKQGSFSKLILADSA--L  149 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~-------~~---------------------------~~~~g~~a~~~~v~~~--~  149 (383)
                      |++|+|+++|++++.+++||+|++.       +.                           ...+|+|++|++++.+  .
T Consensus        60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~  139 (375)
T cd08282          60 EAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFN  139 (375)
T ss_pred             ccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCc
Confidence            9999999999999999999999862       10                           0124899999999976  8


Q ss_pred             cccCCCCCCHH---HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-ch
Q psy9949         150 VHKKPSNISDE---EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DA  224 (383)
Q Consensus       150 ~~~ip~~~~~~---~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~  224 (383)
                      ++++|++++++   +++.+..++.|||+++ ..+++    +++++|+|.| +|++|++++++|+++|+ +|++++++ ++
T Consensus       140 ~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~----~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~  213 (375)
T cd08282         140 LLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGV----QPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPER  213 (375)
T ss_pred             EEECCCCCChhhhhheeeecchHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence            99999999998   4677788899999999 57888    8999999976 79999999999999998 79887754 46


Q ss_pred             HHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCc------------ccccccccccccCCCceEEEecCCC
Q psy9949         225 KDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPL------------DQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       225 ~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~------------~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      .++++++|++ .+++++.++.+.+.+.  +++|+++||+|+..            ....  +++++  ++|+++.++...
T Consensus       214 ~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~--~~g~~~~~g~~~  288 (375)
T cd08282         214 LDLAESIGAI-PIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQL--IRVTR--PGGGIGIVGVYV  288 (375)
T ss_pred             HHHHHHcCCe-EeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHH--HHHhh--cCcEEEEEeccC
Confidence            6788899984 5677666666665543  47999999999864            2333  78899  999998776432


Q ss_pred             ccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHH
Q psy9949         291 LKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFE  368 (383)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~  368 (383)
                      ....+............+++..  +    ..++... .+......+.+.+++++++++++++  ++.+.|+++++++|++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~  361 (375)
T cd08282         289 AEDPGAGDAAAKQGELSFDFGL--L----WAKGLSF-GTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYA  361 (375)
T ss_pred             CcccccccccccCccccccHHH--H----HhcCcEE-EEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHH
Confidence            1111100000000001111111  1    1111111 1222234678899999999999986  3789999999999999


Q ss_pred             HHhcCCCCCeEEEe
Q psy9949         369 KVQQGHLRGKIILN  382 (383)
Q Consensus       369 ~l~~~~~~gkvvl~  382 (383)
                      .+.+++ .+|+|++
T Consensus       362 ~~~~~~-~~kvvv~  374 (375)
T cd08282         362 RFDKRL-ETKVVIK  374 (375)
T ss_pred             HHhcCC-ceEEEeC
Confidence            999888 8899986

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.6e-34  Score=273.86  Aligned_cols=309  Identities=19%  Similarity=0.226  Sum_probs=240.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++++  ++++ +++.|++++++|+||+.++++|++|+.+..|.                 ....+|.++|+|
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~-----------------~~~~~~~~~g~e   60 (363)
T cd08279           1 MRAAVLHEVGKP--LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGD-----------------LPAPLPAVLGHE   60 (363)
T ss_pred             CeEEEEecCCCC--ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCC-----------------CCCCCCcccccc
Confidence            789999988765  7787 78999999999999999999999999988775                 113456789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec--------------------------------------------CCCCCCceEE
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ--------------------------------------------PHKQGSFSKL  142 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~--------------------------------------------~~~~g~~a~~  142 (383)
                      ++|+|+++|++++.+++||+|++...                                            ....|+|++|
T Consensus        61 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  140 (363)
T cd08279          61 GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEY  140 (363)
T ss_pred             ceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceee
Confidence            99999999999999999999998310                                            0125899999


Q ss_pred             EeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec
Q psy9949         143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS  221 (383)
Q Consensus       143 ~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~  221 (383)
                      +.++.+.++++|+++++++++.++++++|||+++....++    +++++|+|+| +|++|++++++|+..|++ |+++.+
T Consensus       141 ~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~----~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~  215 (363)
T cd08279         141 TVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARV----RPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDP  215 (363)
T ss_pred             EEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcC
Confidence            9999999999999999999999999999999998877888    8999999996 799999999999999995 888875


Q ss_pred             C-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCC
Q psy9949         222 G-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSL  297 (383)
Q Consensus       222 ~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~  297 (383)
                      + ++.++++++|++++++++..++..++..   ..++|+++|++++....... +++++  ++|+++.++.....     
T Consensus       216 ~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~~~-----  287 (363)
T cd08279         216 VPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQA-LAMTR--KGGTAVVVGMGPPG-----  287 (363)
T ss_pred             CHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHH-HHHhh--cCCeEEEEecCCCC-----
Confidence            5 4567778899999998887677666654   35799999999965443332 88999  99999998542110     


Q ss_pred             CCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcC
Q psy9949         298 GLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQG  373 (383)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~  373 (383)
                         .     ...+....+    ...+..+....+  ....+.+++++++++++.+.+  .+.++|+++++++|++.+.++
T Consensus       288 ---~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~  355 (363)
T cd08279         288 ---E-----TVSLPALEL----FLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAG  355 (363)
T ss_pred             ---c-----ccccCHHHH----hhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcC
Confidence               0     001111111    011111111111  123678999999999999876  367889999999999999988


Q ss_pred             CCCCeEE
Q psy9949         374 HLRGKII  380 (383)
Q Consensus       374 ~~~gkvv  380 (383)
                      +..+.++
T Consensus       356 ~~~~~~~  362 (363)
T cd08279         356 ENARGVI  362 (363)
T ss_pred             CceeEEe
Confidence            8764443

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.2e-34  Score=266.47  Aligned_cols=313  Identities=27%  Similarity=0.362  Sum_probs=249.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++...+.++.+.++ +.+.|.++++|++|++.++++|++|+....|..+               .....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e   64 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP---------------PPVKDPLIPLSD   64 (336)
T ss_pred             CeEEEEeccCCCcceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCC---------------CCCCCCcccccc
Confidence            789999987766778888 7888889999999999999999999998877511               122367889999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYT  168 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~  168 (383)
                      ++|+|+++|+++.++++||+|++...                  ...+|+|++|+.++.+.++++|+++++.+++.+++.
T Consensus        65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~  144 (336)
T cd08276          65 GAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCA  144 (336)
T ss_pred             eeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHH
Confidence            99999999999999999999998641                  112588999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC-hHHHH
Q psy9949         169 GLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE-PEAMH  246 (383)
Q Consensus       169 ~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~-~~~~~  246 (383)
                      +++||+++...+.+    +++++|+|+| +|++|++++++|++.|++|++++++ ++.+.+.++|.+.++++.. .++.+
T Consensus       145 ~~~a~~~l~~~~~~----~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  219 (336)
T cd08276         145 GLTAWNALFGLGPL----KPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGE  219 (336)
T ss_pred             HHHHHHHHHhhcCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHH
Confidence            99999999877888    8999999996 8999999999999999999999865 4567777789998888776 56666


Q ss_pred             HHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCC
Q psy9949         247 SIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT  323 (383)
Q Consensus       247 ~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (383)
                      .+...   .++|+++|+++.......  +++++  ++|+++.++.......         ......+         ..++
T Consensus       220 ~~~~~~~~~~~d~~i~~~~~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~---------~~~~~~~---------~~~~  277 (336)
T cd08276         220 EVLKLTGGRGVDHVVEVGGPGTLAQS--IKAVA--PGGVISLIGFLSGFEA---------PVLLLPL---------LTKG  277 (336)
T ss_pred             HHHHHcCCCCCcEEEECCChHHHHHH--HHhhc--CCCEEEEEccCCCCcc---------CcCHHHH---------hhcc
Confidence            65532   479999999987655555  89999  9999999864211100         0001111         1122


Q ss_pred             ccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         324 NTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..+. +......+.+.+++++++++.+.+...+.+++++++++++.+.+++..||+++++
T Consensus       278 ~~~~-~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         278 ATLR-GIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             eEEE-EEecCcHHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            2221 1222346789999999999988777778999999999999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-33  Score=264.99  Aligned_cols=326  Identities=22%  Similarity=0.265  Sum_probs=245.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      .|++.+.+.+.+..++++ +.+.|.|.+++|+|++.++++|++|+.+..|..+               ....+|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e   64 (331)
T cd08273           1 NREVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP---------------DQPPLPFTPGYD   64 (331)
T ss_pred             CeeEEEccCCCcccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCcccccc
Confidence            478999988888889999 7899999999999999999999999998877511               112467899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|++++.|++||+|+++..   .|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+    
T Consensus        65 ~~G~v~~vG~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~----  137 (331)
T cd08273          65 LVGRVDALGSGVTGFEVGDRVAALTR---VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKV----  137 (331)
T ss_pred             eEEEEEEeCCCCccCCCCCEEEEeCC---CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC----
Confidence            99999999999999999999999863   48999999999999999999999999999999999999999877788    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +++++|+|+|++|++|++++++|+..|++|++++++++.++++++|++. +++...++.......+++|+++|++|+...
T Consensus       138 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~  216 (331)
T cd08273         138 LTGQRVLIHGASGGVGQALLELALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGESY  216 (331)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHHH
Confidence            8999999999889999999999999999999998844567778888753 455544444331112579999999998875


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchh-hhhhHHH-HhhhhhccccccCCccEEEEEEc--CCHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG-LVKNAFD-LLKSNFESGELCKTNTIRWGFFM--PIPYAVKEIN  342 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  342 (383)
                      ...  +++++  ++|+++.++...........+... ....... +....+.+.....+... .....  ...+.+.+++
T Consensus       217 ~~~--~~~l~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~  291 (331)
T cd08273         217 EES--YAALA--PGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR-DRAEDPKLFRQDLTELL  291 (331)
T ss_pred             HHH--HHHhc--CCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech-hcccCHHHHHHHHHHHH
Confidence            444  89999  999999987543221110000000 0000000 00000000000000000 00000  1246788999


Q ss_pred             HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      ++++++.+.+.+.+++++++++++++.+.+++..||+|+
T Consensus       292 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         292 DLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            999999998878889999999999999998888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=5.2e-34  Score=268.44  Aligned_cols=307  Identities=25%  Similarity=0.323  Sum_probs=238.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++.+++++   .+.++ +.+.|++.+++|+||+.++++|+.|+.+..|..                .....|.++|+|
T Consensus         1 ~~~~~~~~~~---~~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~----------------~~~~~~~~~g~~   60 (343)
T cd08235           1 MKAAVLHGPN---DVRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH----------------TDLKPPRILGHE   60 (343)
T ss_pred             CeEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCC----------------ccCCCCcccccc
Confidence            6899998765   37788 789999999999999999999999999887751                113446789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcc-----cccCCCCC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSAL-----VHKKPSNI  157 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~-----~~~ip~~~  157 (383)
                      ++|+|+++|++++.+++||+|+++..                        ....|+|++|+.++.+.     ++++|+++
T Consensus        61 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~  140 (343)
T cd08235          61 IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNV  140 (343)
T ss_pred             eEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCC
Confidence            99999999999999999999998621                        11359999999999998     99999999


Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      ++.+++.+ ..+.+||+++. ..++    +++++|+|+| +|++|++++++|+..|++ |+++.++ ++.+.+.++|.+.
T Consensus       141 ~~~~aa~~-~~~~~a~~~l~-~~~~----~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~  213 (343)
T cd08235         141 SFEEAALV-EPLACCINAQR-KAGI----KPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY  213 (343)
T ss_pred             CHHHHHhh-hHHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcE
Confidence            99999876 78889999996 4477    8999999997 799999999999999998 8887744 5567778899999


Q ss_pred             eeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949         236 VIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK  312 (383)
Q Consensus       236 v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (383)
                      ++++++.++.+.+.+.   .++|++||++++....... +++++  ++|+++.++........      .......    
T Consensus       214 ~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~-~~~l~--~~g~~v~~~~~~~~~~~------~~~~~~~----  280 (343)
T cd08235         214 TIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQA-LELVR--KGGRILFFGGLPKGSTV------NIDPNLI----  280 (343)
T ss_pred             EecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEeccCCCCCc------ccCHHHH----
Confidence            9988887777766542   4699999999976433332 88999  99999998642111000      0000111    


Q ss_pred             hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                             ..++..+ .+......+.++.++++++++.+.+  .+..+|+++++.++++.+.+++ .||+|+.
T Consensus       281 -------~~~~~~l-~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         281 -------HYREITI-TGSYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             -------hhCceEE-EEEecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence                   1111111 1222334678899999999999863  4567899999999999999998 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=4.4e-34  Score=266.78  Aligned_cols=315  Identities=20%  Similarity=0.224  Sum_probs=236.4

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++..+|+++.++++ +.|.|+++++||+||+.++++|++|+.+..|..+               ....+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e   64 (324)
T cd08288           1 FKALVLEKDDGGTSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG---------------IVRTFPLVPGID   64 (324)
T ss_pred             CeeEEEeccCCCcceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc---------------ccCCCCCccccc
Confidence            789999998887778899 8999999999999999999999999998877510               112357789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH--hhh
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI--TAA  181 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~--~~~  181 (383)
                      ++|+|++  ++++++++||+|+++..   ...+|+|++|++++.+.++++|+++++++++.+++++++|++++..  ...
T Consensus        65 ~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~  142 (324)
T cd08288          65 LAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHG  142 (324)
T ss_pred             eEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcC
Confidence            9999999  77778999999998631   0125899999999999999999999999999999999999877641  123


Q ss_pred             cCccCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhc--CCCccEE
Q psy9949         182 LGLVYP-RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYDVI  257 (383)
Q Consensus       182 ~~~~~~-~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d~v  257 (383)
                      .    . ++++|+|+|++|++|++++++|+.+|++|+++++ +++.+.++++|++.++++++...  .+..  .+++|.+
T Consensus       143 ~----~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~  216 (324)
T cd08288         143 V----TPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKERWAGA  216 (324)
T ss_pred             c----CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccCcccEE
Confidence            3    4 5789999998899999999999999999999884 45678888999999998876433  3322  2368899


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHH
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYA  337 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (383)
                      +|++++......  +.+++  .+|+++.+|.....     ...       +++.. .+.+...+.+............+.
T Consensus       217 ~d~~~~~~~~~~--~~~~~--~~g~~~~~G~~~~~-----~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  279 (324)
T cd08288         217 VDTVGGHTLANV--LAQTR--YGGAVAACGLAGGA-----DLP-------TTVMP-FILRGVTLLGIDSVMAPIERRRAA  279 (324)
T ss_pred             EECCcHHHHHHH--HHHhc--CCCEEEEEEecCCC-----CCC-------cchhh-hhccccEEEEEEeecccchhhHHH
Confidence            999997443333  66777  88999988653110     000       01100 001122222211100000112456


Q ss_pred             HHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         338 VKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       338 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ++.+.+++.++.+.+. .+.++++++++|++.+.+++..||+++++
T Consensus       280 ~~~~~~~~~~~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         280 WARLARDLDPALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHHHHHHhcCCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            7778888888888764 67899999999999999999999999875

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.7e-34  Score=265.35  Aligned_cols=319  Identities=28%  Similarity=0.408  Sum_probs=249.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++.++++.+.+.++ +.+.|++.+++|+||+.++++|++|+....+..                ....+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~----------------~~~~~~~~~g~e   63 (325)
T cd08271           1 MKAWVLPKPGAALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGP----------------PAWSYPHVPGVD   63 (325)
T ss_pred             CeeEEEccCCCcceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC----------------CCCCCCcccccc
Confidence            789999988854468888 899999999999999999999999998876641                112236789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+.+|++++++++||+|+++......|+|++|+.++.+.++++|++++..+++.+.+.+.+|++++.+.+.+    
T Consensus        64 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~----  139 (325)
T cd08271          64 GAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRI----  139 (325)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCC----
Confidence            9999999999999999999999985333359999999999999999999999999999999999999999878888    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~  263 (383)
                      +++++++|+|++|++|++++++++..|++|+++.++++.+.+.++|++.+++....++.+.+...   .++|++++++++
T Consensus       140 ~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~  219 (325)
T cd08271         140 EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGG  219 (325)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCc
Confidence            89999999998899999999999999999888876566677788999888887776666666542   479999999998


Q ss_pred             CcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE---cCCHHHHHH
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF---MPIPYAVKE  340 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  340 (383)
                      ......  +++++  ++|+++.++......      .......+..+.      ...+..... ....   ....+.+.+
T Consensus       220 ~~~~~~--~~~l~--~~G~~v~~~~~~~~~------~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~  282 (325)
T cd08271         220 ETAAAL--APTLA--FNGHLVCIQGRPDAS------PDPPFTRALSVH------EVALGAAHD-HGDPAAWQDLRYAGEE  282 (325)
T ss_pred             HhHHHH--HHhhc--cCCEEEEEcCCCCCc------chhHHhhcceEE------EEEeccccc-ccchhhHHHHHHHHHH
Confidence            765554  89999  999999885321100      000000000110      111111100 0000   112456788


Q ss_pred             HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ++++++++.+.+...+.|+++++.++++.+.++...+|+++++
T Consensus       283 ~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         283 LLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            9999999998877778899999999999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8.5e-34  Score=265.46  Aligned_cols=301  Identities=24%  Similarity=0.317  Sum_probs=236.9

Q ss_pred             eeeEEEeecCCC--ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          27 TAAWQISSYGGA--DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        27 ~~a~~~~~~g~~--~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ||++++.+++.+  ..+.++ +.+.|.++++||+||+.++++|++|+....|.                .+...+|.++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~----------------~~~~~~~~~~g   63 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGD----------------LPPPKLPLIPG   63 (329)
T ss_pred             CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCC----------------CCCCCCCcccc
Confidence            789999888753  347777 67888899999999999999999999988775                12234578999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEe-----------e--------------cCCCCCCceEEEeecCcccccCCCCCCH
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGV-----------I--------------QPHKQGSFSKLILADSALVHKKPSNISD  159 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~-----------~--------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~  159 (383)
                      ||++|+|+++|+++.++++||+|++.           +              +...+|+|++|+.++.+.++++|+++++
T Consensus        64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~  143 (329)
T cd08298          64 HEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDD  143 (329)
T ss_pred             ccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCH
Confidence            99999999999999999999999762           1              0112589999999999999999999999


Q ss_pred             HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeee
Q psy9949         160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVID  238 (383)
Q Consensus       160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~  238 (383)
                      .+++.++++++|||+++ ..+++    +++++|+|+| +|++|++++++|+..|++|++++++ ++.+.++++|++.+++
T Consensus       144 ~~~~~~~~~~~ta~~~~-~~~~~----~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~  217 (329)
T cd08298         144 EEAAPLLCAGIIGYRAL-KLAGL----KPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGD  217 (329)
T ss_pred             HHhhHhhhhhHHHHHHH-HhhCC----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEec
Confidence            99999999999999999 68888    9999999997 8999999999999999999999855 5667888899988776


Q ss_pred             CCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         239 YNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       239 ~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      .+..       ...++|+++++++........ +++++  ++|+++.++...           . ....+++..      
T Consensus       218 ~~~~-------~~~~vD~vi~~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~-----------~-~~~~~~~~~------  269 (329)
T cd08298         218 SDDL-------PPEPLDAAIIFAPVGALVPAA-LRAVK--KGGRVVLAGIHM-----------S-DIPAFDYEL------  269 (329)
T ss_pred             cCcc-------CCCcccEEEEcCCcHHHHHHH-HHHhh--cCCEEEEEcCCC-----------C-CCCccchhh------
Confidence            6542       124799999987655443333 89999  999999875210           0 000111111      


Q ss_pred             cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                       ......+ .+......+.+.+++++++++.+++. .++|+++++++|++.+.+++..||+|+
T Consensus       270 -~~~~~~i-~~~~~~~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         270 -LWGEKTI-RSVANLTRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             -hhCceEE-EEecCCCHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence             1111111 12223457788999999999998774 578999999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.5e-33  Score=264.74  Aligned_cols=331  Identities=27%  Similarity=0.378  Sum_probs=236.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCC-CCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPI-LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      .|++++.+++++..++.. +.|.|+ +.+++|+||+.++++|++|+....+...               .....|.++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~   64 (352)
T cd08247           1 YKALTFKNNTSPLTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF---------------HFKVKEKGLGR   64 (352)
T ss_pred             CceEEEecCCCcceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc---------------ccccCCCccCc
Confidence            368899988888665555 455553 4899999999999999999987654310               11123678999


Q ss_pred             ceeEEEEecCCCCC-CCCCCCEEEEeecCC--CCCCceEEEeecCc----ccccCCCCCCHHHHHhhhHHHHHHHHHHHH
Q psy9949         106 DFCGKIVAKGPRVT-DLNIDDVVYGVIQPH--KQGSFSKLILADSA----LVHKKPSNISDEEAAGVLYTGLTAWSALQI  178 (383)
Q Consensus       106 e~~G~Vv~vG~~v~-~~~~Gd~V~~~~~~~--~~g~~a~~~~v~~~----~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~  178 (383)
                      |++|+|+++|++++ .|++||+|+++....  ..|+|++|++++..    .++++|+++++++++.++.++.|||+++.+
T Consensus        65 e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~  144 (352)
T cd08247          65 DYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILED  144 (352)
T ss_pred             eeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHH
Confidence            99999999999998 899999999875211  24899999999987    789999999999999999999999999987


Q ss_pred             hh-hcCccCCCCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEEecCchHHHHHhcCCCeeeeCCChH---HHHHHh-c-
Q psy9949         179 TA-ALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DI-EVVTTCSGDAKDLVTSLNPNLVIDYNEPE---AMHSIA-G-  250 (383)
Q Consensus       179 ~~-~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~-G~-~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~---~~~~i~-~-  250 (383)
                      .. ++    +++++|+|+|++|++|++++++|+.+ |. +++++.+.++.+.++++|++.++++++.+   +..++. . 
T Consensus       145 ~~~~~----~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  220 (352)
T cd08247         145 LGQKL----GPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENV  220 (352)
T ss_pred             hhhcc----CCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhh
Confidence            76 78    89999999999999999999999987 55 67777766666677889999888876654   333332 2 


Q ss_pred             --CCCccEEEEcCCCCcccccc--cccccccCCCceEEEecCCCccCCCCCCCchhhh-hhHHHHhhhhhccccccCCcc
Q psy9949         251 --AGPYDVILDAAGIPLDQINS--YLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLV-KNAFDLLKSNFESGELCKTNT  325 (383)
Q Consensus       251 --~~g~d~v~d~~g~~~~~~~~--~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  325 (383)
                        ..++|++|||+|+.......  .+++..  ++|+++.+++.......  ....... .......  .+.+...+....
T Consensus       221 ~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~--~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~  294 (352)
T cd08247         221 KGQGKFDLILDCVGGYDLFPHINSILKPKS--KNGHYVTIVGDYKANYK--KDTFNSWDNPSANAR--KLFGSLGLWSYN  294 (352)
T ss_pred             cCCCCceEEEECCCCHHHHHHHHHHhCccC--CCCEEEEEeCCCccccc--chhhhhccccchhhh--hhhhhhcCCCcc
Confidence              35799999999984332111  033334  78999987422100000  0000000 0000000  000011112222


Q ss_pred             EEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         326 IRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +......+..+.+.++++++.++.+++.+.+.++++++++|++.+.+++..||+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         295 YQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             eEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            2211122234678999999999999887888999999999999999999899999874

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-33  Score=262.17  Aligned_cols=315  Identities=29%  Similarity=0.431  Sum_probs=248.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++.+++.++.+.++ +.+.|++.+++|+|++.++++|++|+....+...               .....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e   64 (326)
T cd08272           1 MKALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA---------------ARPPLPAILGCD   64 (326)
T ss_pred             CeEEEEccCCCchheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCcccccc
Confidence            789999998888778888 7888889999999999999999999988776511               112347789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC--CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP--HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      ++|+|+++|+++.+|++||+|+++...  ...|+|++|+.++.++++++|+++++.+++.++..+.+||+++.+..++  
T Consensus        65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~--  142 (326)
T cd08272          65 VAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV--  142 (326)
T ss_pred             eeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC--
Confidence            999999999999999999999987521  1148999999999999999999999999999999999999998878888  


Q ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949         185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA  261 (383)
Q Consensus       185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~  261 (383)
                        +++++++|+|++|++|++++++|+..|++|++++++++.+.++++|.+.+++.... +...+...   .++|.++|++
T Consensus       143 --~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~  219 (326)
T cd08272         143 --QAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTV  219 (326)
T ss_pred             --CCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECC
Confidence              89999999999999999999999999999999986666677888999888887766 66666543   4799999999


Q ss_pred             CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEE----E-EEEcCCHH
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR----W-GFFMPIPY  336 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~  336 (383)
                      |+......  +++++  ++|+++.++...  .   .    ...    .....    ...+.+....    . .......+
T Consensus       220 ~~~~~~~~--~~~l~--~~g~~v~~~~~~--~---~----~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T cd08272         220 GGETLDAS--FEAVA--LYGRVVSILGGA--T---H----DLA----PLSFR----NATYSGVFTLLPLLTGEGRAHHGE  278 (326)
T ss_pred             ChHHHHHH--HHHhc--cCCEEEEEecCC--c---c----chh----hHhhh----cceEEEEEcccccccccchhhHHH
Confidence            98654444  88999  999999985431  0   0    000    00001    1111110000    0 00001256


Q ss_pred             HHHHHHHHHHcCCcccccc-eeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         337 AVKEINKFIERGQIKPVID-SKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       337 ~~~~~~~l~~~g~l~~~~~-~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .+.+++++++++.+.+.++ +.|++++++++++.+.+++..+|+++++
T Consensus       279 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         279 ILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            7888999999999887655 8999999999999999888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.9e-34  Score=265.24  Aligned_cols=300  Identities=26%  Similarity=0.362  Sum_probs=231.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++..++ ++.++++ +.+.|+++++||+||+.++++|++|+....+.                 ....+|.++|||
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-----------------~~~~~~~~~g~e   61 (325)
T cd08264           1 MKALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-----------------KVKPMPHIPGAE   61 (325)
T ss_pred             CeeEEeccCC-CCceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCC-----------------CCCCCCeecccc
Confidence            6889888776 5668888 77888899999999999999999999887643                 112346789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++.|++||+|+++..                        ....|+|++|+.++.+.++++|++++++++
T Consensus        62 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~  141 (325)
T cd08264          62 FAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELA  141 (325)
T ss_pred             eeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHh
Confidence            99999999999999999999987511                        012589999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCCh
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEP  242 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~  242 (383)
                      +.+++++.+||+++. ..++    +++++|+|+|++|++|++++++|+.+|++|+++++   .+.++++|+++++++++ 
T Consensus       142 ~~~~~~~~~a~~~l~-~~~~----~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~-  212 (325)
T cd08264         142 ASLPVAALTAYHALK-TAGL----GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDE-  212 (325)
T ss_pred             hhhhhhhHHHHHHHH-hcCC----CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchH-
Confidence            999999999999996 4777    99999999998899999999999999999988873   36667899988887654 


Q ss_pred             HHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949         243 EAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC  321 (383)
Q Consensus       243 ~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (383)
                       ..+.+.+. .++|+++|++|+......  +++++  ++|+++.++.....     .       ..+++..  +    ..
T Consensus       213 -~~~~l~~~~~~~d~vl~~~g~~~~~~~--~~~l~--~~g~~v~~g~~~~~-----~-------~~~~~~~--~----~~  269 (325)
T cd08264         213 -VEEKVKEITKMADVVINSLGSSFWDLS--LSVLG--RGGRLVTFGTLTGG-----E-------VKLDLSD--L----YS  269 (325)
T ss_pred             -HHHHHHHHhCCCCEEEECCCHHHHHHH--HHhhc--cCCEEEEEecCCCC-----C-------CccCHHH--H----hh
Confidence             22333221 679999999998544444  89999  99999998642100     0       0111111  0    11


Q ss_pred             CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEE
Q psy9949         322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKII  380 (383)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvv  380 (383)
                      .+... .+.....++++.++++++...+  ..+.+.|+++++++|++.+.+++..||++
T Consensus       270 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         270 KQISI-IGSTGGTRKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             cCcEE-EEccCCCHHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCccccC
Confidence            11111 1223345778999999996443  45678899999999999999888777753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=8.4e-34  Score=266.35  Aligned_cols=311  Identities=25%  Similarity=0.369  Sum_probs=245.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++..++++. +.++ +.+.|.+++++|+|++.++++|+.|+....|..+               .....|.++|+|
T Consensus         1 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~---------------~~~~~~~~~g~~   63 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP---------------TLTKLPLTLGHE   63 (338)
T ss_pred             CeeEEEecCCCCc-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc---------------ccCCCCEecccc
Confidence            7899999888876 6777 7899999999999999999999999998877511               123457789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEE------------------eec------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYG------------------VIQ------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~------------------~~~------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++.+++||+|++                  ++.      ...+|+|++|+.++.+.++++|++++++++
T Consensus        64 ~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a  143 (338)
T cd08254          64 IAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQA  143 (338)
T ss_pred             ccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHh
Confidence            99999999999999999999986                  210      112489999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      +.++.++.|||+++....++    +++++|+|.| +|++|++++++|+..|++|++++++ ++.+.++++|.+.++++.+
T Consensus       144 ~~~~~~~~ta~~~l~~~~~~----~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~  218 (338)
T cd08254         144 AVATDAVLTPYHAVVRAGEV----KPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLD  218 (338)
T ss_pred             hhhcchHHHHHHHHHhccCC----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCC
Confidence            99999999999999877778    8999999976 7999999999999999999999855 4567778899988887776


Q ss_pred             hHHHHHHh--cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccc
Q psy9949         242 PEAMHSIA--GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGE  319 (383)
Q Consensus       242 ~~~~~~i~--~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (383)
                      ..+.+.+.  ...++|+++||+|........ +++++  ++|+++.++.....    ..         ++..  .+    
T Consensus       219 ~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~~----~~---------~~~~--~~----  276 (338)
T cd08254         219 DSPKDKKAAGLGGGFDVIFDFVGTQPTFEDA-QKAVK--PGGRIVVVGLGRDK----LT---------VDLS--DL----  276 (338)
T ss_pred             cCHHHHHHHhcCCCceEEEECCCCHHHHHHH-HHHhh--cCCEEEEECCCCCC----Cc---------cCHH--HH----
Confidence            55555442  235799999999876443333 89999  99999998532100    00         0000  00    


Q ss_pred             ccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         320 LCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..++.... +.+....+.+..++++++++.+.+. .+.+++++++++++.+.+++..||+|++.
T Consensus       277 ~~~~~~~~-~~~~~~~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         277 IARELRII-GSFGGTPEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             hhCccEEE-EeccCCHHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            11111121 2223347889999999999998876 67899999999999999999999999863

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=7.1e-34  Score=269.50  Aligned_cols=310  Identities=18%  Similarity=0.193  Sum_probs=235.3

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      ||+++.+.+++  +.++ +.+.|++++++|+||+.++++|++|++...|.                 ....+|.++|||+
T Consensus         2 ~a~~~~~~~~~--~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~-----------------~~~~~~~i~g~e~   61 (365)
T cd05279           2 KAAVLWEKGKP--LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGK-----------------LPTPLPVILGHEG   61 (365)
T ss_pred             ceeEEecCCCC--cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCC-----------------CCCCCCcccccce
Confidence            57777776654  7788 89999999999999999999999999988775                 1134578999999


Q ss_pred             eEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CCCCCceEE
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HKQGSFSKL  142 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~a~~  142 (383)
                      +|+|+++|++++.+++||+|+++...                                             ...|+|++|
T Consensus        62 ~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~  141 (365)
T cd05279          62 AGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEY  141 (365)
T ss_pred             eEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccce
Confidence            99999999999999999999876210                                             013789999


Q ss_pred             EeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEe-
Q psy9949         143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTC-  220 (383)
Q Consensus       143 ~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~-  220 (383)
                      +.++.+.++++|+++++++++.+.+++.+||+++...+++    +++++|+|+| +|++|++++++|+.+|++ |+++. 
T Consensus       142 ~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~----~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~  216 (365)
T cd05279         142 TVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKV----TPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDI  216 (365)
T ss_pred             EEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeC
Confidence            9999999999999999999999999999999998878888    9999999997 799999999999999995 67766 


Q ss_pred             cCchHHHHHhcCCCeeeeCCCh--HHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCC
Q psy9949         221 SGDAKDLVTSLNPNLVIDYNEP--EAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDS  296 (383)
Q Consensus       221 ~~~~~~~~~~lg~~~v~~~~~~--~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~  296 (383)
                      ++++.++++++|++.++++++.  ++.+.+.+  ..++|+++|++|.......+ +++++. ++|+++.++.....    
T Consensus       217 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~-~~~l~~-~~G~~v~~g~~~~~----  290 (365)
T cd05279         217 NKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQA-LDATRL-GGGTSVVVGVPPSG----  290 (365)
T ss_pred             CHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHH-HHHhcc-CCCEEEEEecCCCC----
Confidence            4456788899999988887765  56555543  25799999999864443332 556542 67899987532100    


Q ss_pred             CCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCC
Q psy9949         297 LGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGH  374 (383)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~  374 (383)
                          .+.......+ ..    ...++|..   .......+.+.+++++++++.++.  .+.++|+++++++||+.+.+++
T Consensus       291 ----~~~~~~~~~~-~~----~~~l~g~~---~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~  358 (365)
T cd05279         291 ----TEATLDPNDL-LT----GRTIKGTV---FGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGE  358 (365)
T ss_pred             ----CceeeCHHHH-hc----CCeEEEEe---ccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCC
Confidence                0000011111 11    11122210   001124678999999999998875  5788999999999999998776


Q ss_pred             CCCeEEE
Q psy9949         375 LRGKIIL  381 (383)
Q Consensus       375 ~~gkvvl  381 (383)
                      .. |+++
T Consensus       359 ~~-~~~~  364 (365)
T cd05279         359 SI-RTIL  364 (365)
T ss_pred             ce-eeee
Confidence            64 6665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=7.5e-34  Score=267.16  Aligned_cols=310  Identities=21%  Similarity=0.281  Sum_probs=231.6

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++.++++  .+++. +.|.|+|+++||+||++++++|++|+.++.+...      .       .....+|.++|||
T Consensus         1 ~~~~~~~~~~~--~~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~------~-------~~~~~~p~~~g~e   64 (341)
T PRK05396          1 MKALVKLKAEP--GLWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEW------A-------QKTIPVPMVVGHE   64 (341)
T ss_pred             CceEEEecCCC--ceEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCc------c-------cccCCCCccccee
Confidence            68999988664  47888 7899999999999999999999999987765300      0       0123467889999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++++++||+|++...                        ...+|+|++|+.++.+.++++|++++++++
T Consensus        65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~  144 (341)
T PRK05396         65 FVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLA  144 (341)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHh
Confidence            99999999999999999999987511                        013599999999999999999999999988


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      +.+ ..+.++++++..  ..    .++++|+|.| +|++|++++++|+.+|+ +|+++.++ ++.++++++|++.+++++
T Consensus       145 ~~~-~~~~~~~~~~~~--~~----~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~  216 (341)
T PRK05396        145 AIF-DPFGNAVHTALS--FD----LVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA  216 (341)
T ss_pred             Hhh-hHHHHHHHHHHc--CC----CCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence            855 455556665542  23    6899999987 79999999999999999 67777644 456788899999999888


Q ss_pred             ChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949         241 EPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES  317 (383)
Q Consensus       241 ~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (383)
                      +.++.+.+.+.   .++|++|||.|+....... +++++  ++|+++.++....      ..  .     +++.      
T Consensus       217 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~------~~--~-----~~~~------  274 (341)
T PRK05396        217 KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQM-LDNMN--HGGRIAMLGIPPG------DM--A-----IDWN------  274 (341)
T ss_pred             cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEecCCC------CC--c-----ccHH------
Confidence            77777776542   4799999999876543332 88999  9999999864320      00  0     0110      


Q ss_pred             ccccCCccEEEEEEcCCHHHHHHHHHHHHcC-CcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         318 GELCKTNTIRWGFFMPIPYAVKEINKFIERG-QIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ....++..+.........+.+..++++++++ ++.+.+.+.++++++++|++.+.+++ .||++++.
T Consensus       275 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        275 KVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             HHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence            0111111221111111234566788899988 45556778999999999999998877 79999863

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.7e-33  Score=262.90  Aligned_cols=314  Identities=28%  Similarity=0.393  Sum_probs=248.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++...+.+..+.++ +.+.|++.+++|+|++.++++|++|+.+..|..+               ....+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e   64 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG---------------IKLPLPHILGSD   64 (342)
T ss_pred             CeEEEEecCCCccceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC---------------CCCCCCeecccc
Confidence            688888876666778888 6788889999999999999999999998877511               123457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|+++++|++||+|+++..                        ....|++++|+.++.+.++++|++++++++
T Consensus        65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a  144 (342)
T cd08266          65 GAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEA  144 (342)
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHH
Confidence            99999999999999999999987611                        012588999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      +.+++++.+||+++.+..++    +++++++|+|+++++|++++++++..|++|+.++++ ++.+.+.+++.+.+++..+
T Consensus       145 ~~~~~~~~~a~~~l~~~~~~----~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (342)
T cd08266         145 AAAPLTFLTAWHMLVTRARL----RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRK  220 (342)
T ss_pred             HhhhhHHHHHHHHHHHhcCC----CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCC
Confidence            99999999999998877888    899999999998999999999999999999988855 4566777788877787776


Q ss_pred             hHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         242 PEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       242 ~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      .++...+..   ..++|++++++|+......  +++++  ++|+++.++......        .    ..+...      
T Consensus       221 ~~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~--~~~l~--~~G~~v~~~~~~~~~--------~----~~~~~~------  278 (342)
T cd08266         221 EDFVREVRELTGKRGVDVVVEHVGAATWEKS--LKSLA--RGGRLVTCGATTGYE--------A----PIDLRH------  278 (342)
T ss_pred             hHHHHHHHHHhCCCCCcEEEECCcHHHHHHH--HHHhh--cCCEEEEEecCCCCC--------C----CcCHHH------
Confidence            666665543   2479999999998655444  88999  999999986432110        0    000000      


Q ss_pred             cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ...++..+ .+........+.+++++++++.+.+.+.+.|+++++++|++.+.++...+|++++.
T Consensus       279 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         279 VFWRQLSI-LGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HhhcceEE-EEEecCCHHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            01112222 12233346788999999999999888888999999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=3.2e-33  Score=258.56  Aligned_cols=309  Identities=32%  Similarity=0.525  Sum_probs=246.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+++++..++..+.+.++ +.+.|++++++|+||+.++++|++|+....|....             .....+|..+|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~~~~~g~e   66 (309)
T cd05289           1 MKAVRIHEYGGPEVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKA-------------AFPLTLPLIPGHD   66 (309)
T ss_pred             CceEEEcccCCccceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccc-------------cCCCCCCCccccc
Confidence            688899888877667777 67888899999999999999999999988765110             0123457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|+++..+++||+|+++.....+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++....++    
T Consensus        67 ~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~----  142 (309)
T cd05289          67 VAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGL----  142 (309)
T ss_pred             eeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCC----
Confidence            9999999999999999999999986222349999999999999999999999999999999999999999877777    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .++++|+|+|++|++|++++++++..|++|++++++++.+.++++|.+.+++....++.. .....++|+++|++|+...
T Consensus       143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~d~v~~~~~~~~~  221 (309)
T cd05289         143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAANADFLRSLGADEVIDYTKGDFER-AAAPGGVDAVLDTVGGETL  221 (309)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEEEeCCCCchhh-ccCCCCceEEEECCchHHH
Confidence            899999999988999999999999999999998865566777889988888777655544 2233579999999998855


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE  346 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (383)
                      ...  +++++  ++|+++.++....           .. .  ....         .+..+......+..+.+.+++++++
T Consensus       222 ~~~--~~~l~--~~g~~v~~g~~~~-----------~~-~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  274 (309)
T cd05289         222 ARS--LALVK--PGGRLVSIAGPPP-----------AE-Q--AAKR---------RGVRAGFVFVEPDGEQLAELAELVE  274 (309)
T ss_pred             HHH--HHHHh--cCcEEEEEcCCCc-----------ch-h--hhhh---------ccceEEEEEecccHHHHHHHHHHHH
Confidence            555  88999  9999999854210           00 0  0000         1111111111222678999999999


Q ss_pred             cCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         347 RGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       347 ~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      ++.+.+.+++.|++++++++++.+.+++..+|+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         275 AGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             CCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            99988778889999999999999998888888874

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.4e-33  Score=265.67  Aligned_cols=305  Identities=21%  Similarity=0.281  Sum_probs=236.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      |+++++..++   .++++ +.+.|+|. ++||+||+.++++|+.|+....|..                 ...+|.++|+
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~-----------------~~~~~~~~g~   59 (344)
T cd08284           1 MKAVVFKGPG---DVRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHI-----------------PSTPGFVLGH   59 (344)
T ss_pred             CeeEEEecCC---CceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCC-----------------CCCCCccccc
Confidence            6788887653   47888 89999885 9999999999999999998887751                 1334678999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeec----------------------------CCCCCCceEEEeecCc--ccccCCC
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ----------------------------PHKQGSFSKLILADSA--LVHKKPS  155 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~----------------------------~~~~g~~a~~~~v~~~--~~~~ip~  155 (383)
                      |++|+|+++|++++.+++||+|++...                            ...+|+|++|+.++.+  .++++|+
T Consensus        60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~  139 (344)
T cd08284          60 EFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPD  139 (344)
T ss_pred             ceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCC
Confidence            999999999999999999999998531                            0114899999999864  9999999


Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCC
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNP  233 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~  233 (383)
                      ++++++++.++.+++|||+++. ..++    +++++|+|+| +|++|++++++|+.+|+ +|+++++. ++.++++++|+
T Consensus       140 ~l~~~~a~~l~~~~~ta~~~~~-~~~~----~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~  213 (344)
T cd08284         140 GLSDEAALLLGDILPTGYFGAK-RAQV----RPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGA  213 (344)
T ss_pred             CCCHHHhhhhcCchHHHHhhhH-hcCC----ccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCC
Confidence            9999999999999999999996 4777    8999999997 89999999999999997 89998744 45677788997


Q ss_pred             CeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949         234 NLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL  310 (383)
Q Consensus       234 ~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (383)
                      . .++++..++...+.+   ..++|++||++|+......+ +++++  ++|+++.+|.......       .  ......
T Consensus       214 ~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~-~~~l~--~~g~~v~~g~~~~~~~-------~--~~~~~~  280 (344)
T cd08284         214 E-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLA-FDLVR--PGGVISSVGVHTAEEF-------P--FPGLDA  280 (344)
T ss_pred             e-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHhcc--cCCEEEEECcCCCCCc-------c--ccHHHH
Confidence            5 466666556665543   35799999999975443332 88999  9999999864321100       0  000111


Q ss_pred             hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                               ..++..+. .......+.+++++++++++.+++  ++.+++++++++++++.+.+++. ||+|++
T Consensus       281 ---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         281 ---------YNKNLTLR-FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             ---------hhcCcEEE-EecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence                     11111221 112335788999999999999875  46788999999999999988877 999875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-33  Score=263.82  Aligned_cols=290  Identities=21%  Similarity=0.292  Sum_probs=221.1

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++   +++++ +.+.|+++++||+||+.++++|++|+....|.                   ...|.++|||
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~-------------------~~~~~~~G~e   57 (319)
T cd08242           1 MKALVLDGGL---DLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGY-------------------YPFPGVPGHE   57 (319)
T ss_pred             CeeEEEeCCC---cEEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCC-------------------CCCCCccCce
Confidence            6899998744   47888 89999999999999999999999999988775                   2257899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++   +++||+|.....                         ...+|+|++|++++.++++++|++++.++
T Consensus        58 ~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~  134 (319)
T cd08242          58 FVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQ  134 (319)
T ss_pred             EEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHH
Confidence            99999999988   679999974210                         01258999999999999999999999998


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      ++.+ ....++|+.+ ...++    +++++|+|+| +|++|++++|+|+.+|++|++++++ ++.+.++++|++.+++++
T Consensus       135 aa~~-~~~~~~~~~~-~~~~~----~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~  207 (319)
T cd08242         135 AVFA-EPLAAALEIL-EQVPI----TPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDE  207 (319)
T ss_pred             hhhh-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcc
Confidence            8864 3444566655 47777    8999999997 8999999999999999999988854 567888889998887764


Q ss_pred             ChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccc
Q psy9949         241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGEL  320 (383)
Q Consensus       241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (383)
                      ..      ....++|+++|++|+....... +++++  ++|+++..+....           ..  .+++..  +    .
T Consensus       208 ~~------~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~g~~v~~~~~~~-----------~~--~~~~~~--~----~  259 (319)
T cd08242         208 AE------SEGGGFDVVVEATGSPSGLELA-LRLVR--PRGTVVLKSTYAG-----------PA--SFDLTK--A----V  259 (319)
T ss_pred             cc------ccCCCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEcccCC-----------CC--ccCHHH--h----e
Confidence            32      2335799999999885543332 78999  9999997643210           00  011111  1    1


Q ss_pred             cCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         321 CKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      .+...+. +..   ...+++++++++++++  .+.+.+.|+++++++||+.+.++. .+|+|++
T Consensus       260 ~~~~~i~-~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         260 VNEITLV-GSR---CGPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             ecceEEE-EEe---cccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence            1111221 111   1137889999999998  456788999999999999998666 4799885

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1.2e-33  Score=263.20  Aligned_cols=317  Identities=25%  Similarity=0.320  Sum_probs=248.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++...+.+..+.++ +++.|++.+++|+|++.++++|++|+....|..+               .....|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e   64 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYP---------------GLPPLPYVPGSD   64 (325)
T ss_pred             CceEEEcccCCcccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCC---------------CCCCCCeecccc
Confidence            678888877766678888 7899999999999999999999999988877511               123467899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecC--CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQP--HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      ++|+|+++|+++.+|++||+|+++...  ...|++++|+.++.+.++++|+++++++++.+++++.+||+++....++  
T Consensus        65 ~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~--  142 (325)
T cd08253          65 GAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGA--  142 (325)
T ss_pred             eEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCC--
Confidence            999999999999999999999988511  1248999999999999999999999999999999999999999877888  


Q ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEc
Q psy9949         185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDA  260 (383)
Q Consensus       185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~  260 (383)
                        +++++++|+|++|++|++++++++..|++|++++++ ++.+.+.++|++.+++....++...+.+   ..++|+++++
T Consensus       143 --~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd08253         143 --KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEV  220 (325)
T ss_pred             --CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEEC
Confidence              899999999999999999999999999999999865 4567778899988888777666666543   3479999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAV  338 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  338 (383)
                      +|+......  +++++  ++|+++.++... .. .  ..  .  ..  .+...    ...+.+...  ...  ....+.+
T Consensus       221 ~~~~~~~~~--~~~l~--~~g~~v~~~~~~-~~-~--~~--~--~~--~~~~~----~~~~~~~~~--~~~~~~~~~~~~  280 (325)
T cd08253         221 LANVNLAKD--LDVLA--PGGRIVVYGSGG-LR-G--TI--P--IN--PLMAK----EASIRGVLL--YTATPEERAAAA  280 (325)
T ss_pred             CchHHHHHH--HHhhC--CCCEEEEEeecC-Cc-C--CC--C--hh--HHHhc----CceEEeeeh--hhcCHHHHHHHH
Confidence            998765544  78899  999999986432 00 0  00  0  00  00111    111111100  000  0113456


Q ss_pred             HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.+.+++.++.+++...+.|++++++++++.+.++...||++++.
T Consensus       281 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         281 EAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            777788888888877888999999999999999988899999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.4e-33  Score=265.55  Aligned_cols=311  Identities=23%  Similarity=0.338  Sum_probs=235.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++++.+   .+.++ +.+.|++.++||+||+.++++|++|+....+..                 ....|.++|+|
T Consensus         1 ~~a~~~~~~~---~l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-----------------~~~~~~~~g~~   59 (343)
T cd08236           1 MKALVLTGPG---DLRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-----------------AYHPPLVLGHE   59 (343)
T ss_pred             CeeEEEecCC---ceeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-----------------CCCCCcccCcc
Confidence            6899998865   37787 789999999999999999999999998877651                 23356789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++.|++||+|+++..                        ....|+|++|+.++.+.++++|++++++++
T Consensus        60 ~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~a  139 (343)
T cd08236          60 FSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEA  139 (343)
T ss_pred             eEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHH
Confidence            99999999999999999999998621                        113599999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      +.+ ..++|||+++. ..++    +++++|+|+| +|.+|++++++|+.+|++ |++++++ ++.++++++|++.+++++
T Consensus       140 a~~-~~~~ta~~~l~-~~~~----~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~  212 (343)
T cd08236         140 AMI-EPAAVALHAVR-LAGI----TLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK  212 (343)
T ss_pred             Hhc-chHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc
Confidence            888 57789999996 7777    8999999997 799999999999999996 9888855 456777889998888887


Q ss_pred             ChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949         241 EPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES  317 (383)
Q Consensus       241 ~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (383)
                      ... ..++..   ..++|+++||+|+....... +++++  ++|+++.++.... . .  .......   ..+..    +
T Consensus       213 ~~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~-~-~--~~~~~~~---~~~~~----~  277 (343)
T cd08236         213 EED-VEKVRELTEGRGADLVIEAAGSPATIEQA-LALAR--PGGKVVLVGIPYG-D-V--TLSEEAF---EKILR----K  277 (343)
T ss_pred             ccc-HHHHHHHhCCCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEEcccCC-C-c--ccccCCH---HHHHh----c
Confidence            655 555443   24699999999875443332 89999  9999999864320 0 0  0000000   00001    1


Q ss_pred             ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhc-CCCCCeEEE
Q psy9949         318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQ-GHLRGKIIL  381 (383)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~-~~~~gkvvl  381 (383)
                      ...+.+... ........+.+.++.++++++++.  +.+.+.+++++++++++.+.+ +...||+|+
T Consensus       278 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         278 ELTIQGSWN-SYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             CcEEEEEee-ccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            112221111 000001256788899999999875  456788999999999999998 667788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=3.4e-33  Score=259.82  Aligned_cols=315  Identities=26%  Similarity=0.336  Sum_probs=246.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++.+.+.+..+++. +.+.|.+.+++|+||+.++++|++|+....|..+               ....+|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e   64 (323)
T cd05276           1 MKAIVIKEPGGPEVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP---------------PPPGASDILGLE   64 (323)
T ss_pred             CeEEEEecCCCcccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC---------------CCCCCCCcccce
Confidence            799999988877778888 7787888999999999999999999988866411               123457899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|+++..+++||+|+++..   +|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.+...+    
T Consensus        65 ~~G~v~~vg~~~~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~----  137 (323)
T cd05276          65 VAGVVVAVGPGVTGWKVGDRVCALLA---GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGL----  137 (323)
T ss_pred             eEEEEEeeCCCCCCCCCCCEEEEecC---CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCC----
Confidence            99999999999999999999998853   59999999999999999999999999999999999999998877788    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g  262 (383)
                      +++++|+|+|++|++|++++++++..|++|+++.++ ++.+.++++|.+.+++....++.+.+..   ..++|++||++|
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVG  217 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCc
Confidence            899999999999999999999999999999998865 4566778889888888877666666543   247999999999


Q ss_pred             CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEE--EEcC--CHHHH
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWG--FFMP--IPYAV  338 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~  338 (383)
                      +......  +++++  ++|+++.++.......   ..  .    ...+...    ...+.+......  ...+  ..+.+
T Consensus       218 ~~~~~~~--~~~~~--~~g~~i~~~~~~~~~~---~~--~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05276         218 GDYLARN--LRALA--PDGRLVLIGLLGGAKA---EL--D----LAPLLRK----RLTLTGSTLRSRSLEEKAALAAAFR  280 (323)
T ss_pred             hHHHHHH--HHhhc--cCCEEEEEecCCCCCC---CC--c----hHHHHHh----CCeEEEeeccchhhhccHHHHHHHH
Confidence            8775544  78888  9999998864211110   00  0    0001111    111121111000  0000  13456


Q ss_pred             HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      .++.++++++++.+...+.|++++++++++.+.++...||+++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         281 EHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            7888899999998778889999999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.9e-33  Score=259.03  Aligned_cols=313  Identities=26%  Similarity=0.346  Sum_probs=244.0

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      +|+....++.+..+.+. +.+.|.+.+++|+|+|.++++|++|+....+..                 ...+|.++|||+
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~-----------------~~~~~~~~g~e~   62 (320)
T cd05286           1 KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLY-----------------PLPLPFVLGVEG   62 (320)
T ss_pred             CeEEEecCCCccceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCC-----------------CCCCCccCCcce
Confidence            46677777777677787 677778899999999999999999998887751                 123467899999


Q ss_pred             eEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCC
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP  187 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  187 (383)
                      +|+|+.+|+++.++++||+|+++.   ..|+|++|+.++.+.++++|++++..+++.+++..++||+++....++    +
T Consensus        63 ~G~v~~~g~~~~~~~~G~~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~----~  135 (320)
T cd05286          63 AGVVEAVGPGVTGFKVGDRVAYAG---PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV----K  135 (320)
T ss_pred             eEEEEEECCCCCCCCCCCEEEEec---CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC----C
Confidence            999999999999999999999885   148999999999999999999999999999999999999999877888    8


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~  263 (383)
                      ++++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++.+++....++.+.+..   ..++|++++|+++
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~  215 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGK  215 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCc
Confidence            99999999999999999999999999999999855 4567778899998888877777766654   2479999999998


Q ss_pred             CcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHH
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEI  341 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  341 (383)
                      ......  +++++  ++|+++.++...... .  .+    ..  ..+....+    .+.+.........  ...+.+.++
T Consensus       216 ~~~~~~--~~~l~--~~g~~v~~g~~~~~~-~--~~----~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  278 (320)
T cd05286         216 DTFEGS--LDSLR--PRGTLVSFGNASGPV-P--PF----DL--LRLSKGSL----FLTRPSLFHYIATREELLARAAEL  278 (320)
T ss_pred             HhHHHH--HHhhc--cCcEEEEEecCCCCC-C--cc----CH--HHHHhcCc----EEEEEehhhhcCCHHHHHHHHHHH
Confidence            654444  89999  999999986421110 0  00    00  00101111    1111000000000  113456788


Q ss_pred             HHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         342 NKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       342 ~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +++++++.+.+.+.+.|++++++++++.+.++...||++++
T Consensus       279 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         279 FDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             HHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            89999999887777889999999999999988888999874

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.9e-33  Score=257.82  Aligned_cols=315  Identities=33%  Similarity=0.479  Sum_probs=237.3

Q ss_pred             EeecCCCcee--EeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeE
Q psy9949          32 ISSYGGADEL--QFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG  109 (383)
Q Consensus        32 ~~~~g~~~~l--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G  109 (383)
                      ++..++++++  +++ +.+.|++.++||+|++.++++|++|+....|..+.             ......|..+|||++|
T Consensus         3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-------------~~~~~~~~~~g~e~~G   68 (319)
T cd08267           3 YTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKL-------------LLGRPFPPIPGMDFAG   68 (319)
T ss_pred             eCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcc-------------cccCCCCCcccceeeE
Confidence            4455665554  777 78999999999999999999999999988765110             0112346789999999


Q ss_pred             EEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCC
Q psy9949         110 KIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRD  189 (383)
Q Consensus       110 ~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~  189 (383)
                      +|+++|+++.++++||+|+++......|+|++|+.++.+.++++|+++++++++.+++.+.+||+++....++    +++
T Consensus        69 ~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~g  144 (319)
T cd08267          69 EVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKV----KPG  144 (319)
T ss_pred             EEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC----CCC
Confidence            9999999999999999999886322358999999999999999999999999999999999999999877778    899


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccccc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQIN  269 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~  269 (383)
                      ++|+|+|++|++|++++++|+..|++|++++++++.+.++++|.+++++....++........++|++++|+|+......
T Consensus       145 ~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~  224 (319)
T cd08267         145 QRVLINGASGGVGTFAVQIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLY  224 (319)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHH
Confidence            99999998899999999999999999999887666677888998888876655443112223579999999985432222


Q ss_pred             ccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC
Q psy9949         270 SYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ  349 (383)
Q Consensus       270 ~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  349 (383)
                      .....++  ++|+++.++.........      ....  .+..       .............+..+.+.++++++++++
T Consensus       225 ~~~~~l~--~~g~~i~~g~~~~~~~~~------~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  287 (319)
T cd08267         225 RASLALK--PGGRYVSVGGGPSGLLLV------LLLL--PLTL-------GGGGRRLKFFLAKPNAEDLEQLAELVEEGK  287 (319)
T ss_pred             HhhhccC--CCCEEEEecccccccccc------cccc--chhh-------ccccceEEEEEecCCHHHHHHHHHHHHCCC
Confidence            0033377  999999986432111000      0000  0000       000011111112233788999999999999


Q ss_pred             cccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         350 IKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       350 l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      +.+.+.+.|+++++++|++.+.+++..+|+++
T Consensus       288 ~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         288 LKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             eeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            98888889999999999999998888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=4.2e-33  Score=262.49  Aligned_cols=305  Identities=19%  Similarity=0.268  Sum_probs=231.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      ||++++.+++   .+.++ +.|.|+| +++||+||+.++++|++|+....|..                 ....|.++||
T Consensus         1 m~~~~~~~~~---~~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-----------------~~~~~~~~g~   59 (345)
T cd08287           1 MRATVIHGPG---DIRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVS-----------------PTRAPAPIGH   59 (345)
T ss_pred             CceeEEecCC---ceeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCC-----------------CCCCCccccc
Confidence            6889998655   37888 7899986 89999999999999999998887751                 1234789999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEE-eec-----------------------CCCCCCceEEEeecCc--ccccCCCCCCH
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYG-VIQ-----------------------PHKQGSFSKLILADSA--LVHKKPSNISD  159 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~-~~~-----------------------~~~~g~~a~~~~v~~~--~~~~ip~~~~~  159 (383)
                      |++|+|+++|+++..+++||+|++ +..                       ...+|+|++|+.++.+  .++++|+++++
T Consensus        60 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~  139 (345)
T cd08287          60 EFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSD  139 (345)
T ss_pred             ceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCCh
Confidence            999999999999999999999987 211                       0123899999999974  99999999988


Q ss_pred             HHHH-----hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCc-hHHHHHhcC
Q psy9949         160 EEAA-----GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSGD-AKDLVTSLN  232 (383)
Q Consensus       160 ~~aa-----~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~~-~~~~~~~lg  232 (383)
                      +.+.     ++...+.+||+++. .+++    +++++|+|.| +|++|++++++|+..|++ ++++++++ +.++++++|
T Consensus       140 ~~~~~~~~~~l~~~~~~a~~~~~-~~~~----~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g  213 (345)
T cd08287         140 DEDLLPSLLALSDVMGTGHHAAV-SAGV----RPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFG  213 (345)
T ss_pred             hhhhhhhhHhhhcHHHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence            3221     22256788999985 6777    8999999976 899999999999999995 77776554 567788999


Q ss_pred             CCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949         233 PNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD  309 (383)
Q Consensus       233 ~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  309 (383)
                      ++.+++++..++.+.+...   .++|+++|++|+......+ +++++  ++|+++.++.+.. .   .         .++
T Consensus       214 a~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~-~---~---------~~~  277 (345)
T cd08287         214 ATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQA-IAIAR--PGGRVGYVGVPHG-G---V---------ELD  277 (345)
T ss_pred             CceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHH-HHhhc--cCCEEEEecccCC-C---C---------ccC
Confidence            9999998877777666542   4799999999875543333 88999  9999998854320 0   0         011


Q ss_pred             HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      .. ..     ..++..+. +......+.+.+++++++++++++  ++.+.++++++++|++.+.+++.. |++|+
T Consensus       278 ~~-~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         278 VR-EL-----FFRNVGLA-GGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             HH-HH-----HhcceEEE-EecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence            10 00     11122221 222334678999999999999876  457889999999999998877664 98875

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.1e-32  Score=258.38  Aligned_cols=304  Identities=23%  Similarity=0.322  Sum_probs=234.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++   .++++ +.+.|++.++||+||+.++++|++|+....|..                 ...+|.++|+|
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~-----------------~~~~p~~~g~~   59 (334)
T cd08234           1 MKALVYEGPG---ELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEF-----------------GAAPPLVPGHE   59 (334)
T ss_pred             CeeEEecCCC---ceEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCC-----------------CCCCCcccccc
Confidence            6899998766   47888 899999999999999999999999999888751                 12367899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++.+++||+|++...                        ....|+|++|++++.++++++|+++++.++
T Consensus        60 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~a  139 (334)
T cd08234          60 FAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEA  139 (334)
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHH
Confidence            99999999999999999999987210                        113589999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      +.+ ..+.++++++ +.+++    +++++|+|+| +|++|.+++++|+..|++ |+++.++ ++.+.++++|++.+++++
T Consensus       140 a~~-~~~~~a~~~l-~~~~~----~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~  212 (334)
T cd08234         140 ALA-EPLSCAVHGL-DLLGI----KPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS  212 (334)
T ss_pred             hhh-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC
Confidence            876 6778899998 67888    8999999997 799999999999999996 7777754 456777889988888877


Q ss_pred             ChHHHHH-HhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccc
Q psy9949         241 EPEAMHS-IAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGE  319 (383)
Q Consensus       241 ~~~~~~~-i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (383)
                      ..++..+ .....++|++||++|........ +++++  ++|+++.++......        ......+.+.        
T Consensus       213 ~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~~~~--------~~~~~~~~~~--------  273 (334)
T cd08234         213 REDPEAQKEDNPYGFDVVIEATGVPKTLEQA-IEYAR--RGGTVLVFGVYAPDA--------RVSISPFEIF--------  273 (334)
T ss_pred             CCCHHHHHHhcCCCCcEEEECCCChHHHHHH-HHHHh--cCCEEEEEecCCCCC--------CcccCHHHHH--------
Confidence            6554443 22335799999999865443332 88999  999999986432100        0000011111        


Q ss_pred             ccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         320 LCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                       .++..+. + .....+.+++++++++++++.+  .+.+++++++++++++.+.+ ...||+|+
T Consensus       274 -~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         274 -QKELTII-G-SFINPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             -hCCcEEE-E-eccCHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence             0111111 1 1123677899999999999864  35678999999999999998 77889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=5.8e-33  Score=259.78  Aligned_cols=316  Identities=21%  Similarity=0.280  Sum_probs=234.3

Q ss_pred             eeeEEEeecC----CCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          27 TAAWQISSYG----GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        27 ~~a~~~~~~g----~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      +++|++...+    .++.+.++ +.+.|++.+++|+||+.++++|+.|.....+....             ..+...+.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~-------------~~~~~~~~~   67 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSY-------------SPPVQLGEP   67 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCccc-------------CCCccCCCc
Confidence            5677777544    45678998 89999999999999999999999887665553110             011223567


Q ss_pred             ccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecC-cccccCCCCCC--HHHHHh-hhHHHHHHHHHHHH
Q psy9949         103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS-ALVHKKPSNIS--DEEAAG-VLYTGLTAWSALQI  178 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~-~~~~~ip~~~~--~~~aa~-l~~~~~tA~~~l~~  178 (383)
                      +|+|++|+|+++|++  ++++||+|+++      ++|++|+.++. +.++++|++++  +.+++. +++++.|||+++..
T Consensus        68 ~g~e~~G~V~~~G~~--~~~~Gd~V~~~------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~  139 (329)
T cd05288          68 MRGGGVGEVVESRSP--DFKVGDLVSGF------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTE  139 (329)
T ss_pred             ccCceEEEEEecCCC--CCCCCCEEecc------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHh
Confidence            899999999999964  79999999876      58999999999 99999999995  555555 88899999999987


Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh-cCCCeeeeCCChHHHHHHhcC--CCc
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS-LNPNLVIDYNEPEAMHSIAGA--GPY  254 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~-lg~~~v~~~~~~~~~~~i~~~--~g~  254 (383)
                      ...+    .++++|+|+|++|++|++++++|+..|++|++++++ ++.+.+++ +|++.++++++.++.+++...  +++
T Consensus       140 ~~~~----~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~  215 (329)
T cd05288         140 IGKP----KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGI  215 (329)
T ss_pred             ccCC----CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCc
Confidence            7777    899999999999999999999999999999999865 46677777 999999988877777666543  579


Q ss_pred             cEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCC
Q psy9949         255 DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPI  334 (383)
Q Consensus       255 d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (383)
                      |++|||+|+......  +++++  ++|+++.++.........  . .+.. .......    ++..+.+.... ......
T Consensus       216 d~vi~~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~~~--~-~~~~-~~~~~~~----~~~~~~~~~~~-~~~~~~  282 (329)
T cd05288         216 DVYFDNVGGEILDAA--LTLLN--KGGRIALCGAISQYNATE--P-PGPK-NLGNIIT----KRLTMQGFIVS-DYADRF  282 (329)
T ss_pred             eEEEEcchHHHHHHH--HHhcC--CCceEEEEeeccCccccc--c-cccc-cHHHHhh----CcceEEeecch-hhHHHH
Confidence            999999998655544  88999  999999986421110000  0 0000 0000001    11111111100 000001


Q ss_pred             HHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         335 PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       335 ~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      .+.+.+++++++++.+++.....+++++++++++.+.+++..||+++
T Consensus       283 ~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         283 PEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            35688899999999998766667899999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=8.7e-33  Score=259.90  Aligned_cols=309  Identities=22%  Similarity=0.286  Sum_probs=230.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++..++.  .+++. +.+.|+++++|++||+.++++|++|+.+..+...      .       .....+|.++|||
T Consensus         1 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~------~-------~~~~~~~~~~g~e   64 (341)
T cd05281           1 MKAIVKTKAGP--GAELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEW------A-------QSRIKPPLIFGHE   64 (341)
T ss_pred             CcceEEecCCC--ceEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCC------c-------cccCCCCcccccc
Confidence            68899997764  47888 7899999999999999999999999987654210      0       0112356789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|+++..+++||+|+++..                        ....|+|++|++++.+.++++|++++++.+
T Consensus        65 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a  144 (341)
T cd05281          65 FAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA  144 (341)
T ss_pred             eEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh
Confidence            99999999999999999999988510                        012589999999999999999999998555


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                       +++..+.++++++.  ...    +++++|+|+| +|++|++++++|+.+|+ +|+++.++ ++.++++++|++.+++++
T Consensus       145 -~~~~~~~~a~~~~~--~~~----~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~  216 (341)
T cd05281         145 -SIQEPLGNAVHTVL--AGD----VSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR  216 (341)
T ss_pred             -hhhhHHHHHHHHHH--hcC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence             56667778888875  344    7899999987 79999999999999999 78888644 456778899998888877


Q ss_pred             ChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcc
Q psy9949         241 EPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES  317 (383)
Q Consensus       241 ~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (383)
                      ..++. ++.+   .+++|++||++|+....... +++++  ++|+++.++.... .   ..         +.+..     
T Consensus       217 ~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~-~---~~---------~~~~~-----  274 (341)
T cd05281         217 EEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQG-LKALT--PGGRVSILGLPPG-P---VD---------IDLNN-----  274 (341)
T ss_pred             cccHH-HHHHHcCCCCCCEEEECCCCHHHHHHH-HHHhc--cCCEEEEEccCCC-C---cc---------cccch-----
Confidence            66665 5543   34799999999876543332 88999  9999998864211 0   00         00000     


Q ss_pred             ccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         318 GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ....++..+.........+.+.+++++++++.+.  +.+.+.++++++++||+.+.+++ .||+|++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         275 LVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             hhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence            0111222221111122245678899999999876  45677899999999999999988 8999975

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=3e-32  Score=258.48  Aligned_cols=308  Identities=23%  Similarity=0.322  Sum_probs=224.0

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      .|++|.. .+   ..++++ +.+.|+++++||+||+.++++|++|+....+....             .....+|.++||
T Consensus        18 ~~~~~~~-~~---~~l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-------------~~~~~~p~~~G~   79 (364)
T PLN02702         18 NMAAWLV-GV---NTLKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCA-------------DFVVKEPMVIGH   79 (364)
T ss_pred             cceEEEe-cC---CceEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCc-------------cccCCCCccccc
Confidence            3555554 32   347787 78888899999999999999999999988763100             001235788999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEe-------------------------ecCCCCCCceEEEeecCcccccCCCCCCHH
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGV-------------------------IQPHKQGSFSKLILADSALVHKKPSNISDE  160 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~-------------------------~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~  160 (383)
                      |++|+|+++|+++++|++||+|++.                         .....+|+|++|+.++.+.++++|++++++
T Consensus        80 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~  159 (364)
T PLN02702         80 ECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLE  159 (364)
T ss_pred             ceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHH
Confidence            9999999999999999999999862                         111125899999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeee
Q psy9949         161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVID  238 (383)
Q Consensus       161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~  238 (383)
                      +++... .+.++|+++ ...++    +++++|+|+| +|++|++++++|+.+|++ ++++.++ ++.++++++|++.+++
T Consensus       160 ~aa~~~-~~~~a~~~~-~~~~~----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~  232 (364)
T PLN02702        160 EGAMCE-PLSVGVHAC-RRANI----GPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL  232 (364)
T ss_pred             HHhhhh-HHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEe
Confidence            988632 334588887 57777    8999999997 799999999999999995 5555544 4567888999988766


Q ss_pred             CC--ChHHHHHHhc-----CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHh
Q psy9949         239 YN--EPEAMHSIAG-----AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL  311 (383)
Q Consensus       239 ~~--~~~~~~~i~~-----~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (383)
                      ++  ..++.+++..     .+++|++||++|+....... +++++  ++|+++.+|....   . .    .....  ...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~---~-~----~~~~~--~~~  299 (364)
T PLN02702        233 VSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTA-LEATR--AGGKVCLVGMGHN---E-M----TVPLT--PAA  299 (364)
T ss_pred             cCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEccCCC---C-C----cccHH--HHH
Confidence            43  3455555432     24799999999965443333 89999  9999999864210   0 0    00111  111


Q ss_pred             hhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecC--CCHHHHHHHHhcCCCCCeEEEe
Q psy9949         312 KSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNF--CELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                               .++..+. +.. .....++.++++++++++.  +.+.++|++  +++++|++.+.+++..+|+|+.
T Consensus       300 ---------~~~~~i~-~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        300 ---------AREVDVV-GVF-RYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             ---------hCccEEE-Eec-cChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence                     1111221 111 1246788999999999885  456778665  7999999999988888999985

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2.1e-32  Score=257.48  Aligned_cols=304  Identities=23%  Similarity=0.296  Sum_probs=227.9

Q ss_pred             EEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeE
Q psy9949          30 WQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG  109 (383)
Q Consensus        30 ~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G  109 (383)
                      +++++++   .+.++ +.+.|++.++||+|||.++++|+.|++...+...      .       .....+|.++|+|++|
T Consensus         2 ~~~~~~~---~~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~------~-------~~~~~~~~~~g~e~~G   64 (343)
T cd05285           2 AVLHGPG---DLRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRI------G-------DFVVKEPMVLGHESAG   64 (343)
T ss_pred             ceEecCC---ceeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCC------c-------ccCCCCCcccCcceeE
Confidence            4555543   47888 8899999999999999999999999987643200      0       0012356789999999


Q ss_pred             EEEecCCCCCCCCCCCEEEEee------------------------c-CCCCCCceEEEeecCcccccCCCCCCHHHHHh
Q psy9949         110 KIVAKGPRVTDLNIDDVVYGVI------------------------Q-PHKQGSFSKLILADSALVHKKPSNISDEEAAG  164 (383)
Q Consensus       110 ~Vv~vG~~v~~~~~Gd~V~~~~------------------------~-~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~  164 (383)
                      +|+++|+++++|++||+|++..                        . ....|+|++|++++.+.++++|+++++++++.
T Consensus        65 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~  144 (343)
T cd05285          65 TVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGAL  144 (343)
T ss_pred             EEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhh
Confidence            9999999999999999998621                        0 11358999999999999999999999999987


Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCCCh
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYNEP  242 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~~~  242 (383)
                      + .++.+||+++ ..+++    +++++|+|+| +|++|++++++|+.+|++ |++++++ ++.++++++|++.+++++..
T Consensus       145 ~-~~~~~a~~~~-~~~~~----~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~  217 (343)
T cd05285         145 V-EPLSVGVHAC-RRAGV----RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTE  217 (343)
T ss_pred             h-hHHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccc
Confidence            7 5778899997 57888    9999999987 799999999999999996 8888755 46677888999999988765


Q ss_pred             HH---HHHHhc---CCCccEEEEcCCCCc-ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949         243 EA---MHSIAG---AGPYDVILDAAGIPL-DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF  315 (383)
Q Consensus       243 ~~---~~~i~~---~~g~d~v~d~~g~~~-~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (383)
                      ++   .+++.+   ..++|++|||+|+.. ....  +++++  ++|+++.++.....    ...  .  .....      
T Consensus       218 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~--~~~l~--~~G~~v~~g~~~~~----~~~--~--~~~~~------  279 (343)
T cd05285         218 DTPESAEKIAELLGGKGPDVVIECTGAESCIQTA--IYATR--PGGTVVLVGMGKPE----VTL--P--LSAAS------  279 (343)
T ss_pred             cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHH--HHHhh--cCCEEEEEccCCCC----Ccc--C--HHHHh------
Confidence            53   555543   246999999999863 3334  88999  99999988632110    000  0  00111      


Q ss_pred             ccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCC-CCCeEEEe
Q psy9949         316 ESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGH-LRGKIILN  382 (383)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~-~~gkvvl~  382 (383)
                           .++.... +.. ...+.+.+++++++++.+.  +.+.++|+++++.+|++.+.+++ ..+|++|.
T Consensus       280 -----~~~~~~~-~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         280 -----LREIDIR-GVF-RYANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             -----hCCcEEE-Eec-cChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence                 1111111 111 1237788999999999875  45677899999999999998775 34899874

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.9e-32  Score=255.25  Aligned_cols=304  Identities=26%  Similarity=0.352  Sum_probs=236.0

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      |+++++++|.  .+.++ +.+.|.+.+++|+|++.++++|++|+....|..                ....+|.++|||+
T Consensus         1 ~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~----------------~~~~~p~~~g~e~   61 (330)
T cd08245           1 KAAVVHAAGG--PLEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDW----------------GGSKYPLVPGHEI   61 (330)
T ss_pred             CeEEEecCCC--CceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCC----------------CCCCCCcccCccc
Confidence            5788888764  37888 889999999999999999999999999887751                2234578999999


Q ss_pred             eEEEEecCCCCCCCCCCCEEEEee-------------------------cCCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGVI-------------------------QPHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      +|+|+++|+++++|++||+|+...                         ....+|+|++|+.++.++++++|+++++.++
T Consensus        62 ~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~  141 (330)
T cd08245          62 VGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQA  141 (330)
T ss_pred             eEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHh
Confidence            999999999999999999997421                         1113589999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      +.+++.++|||+++.. .++    +++++|+|+| +|++|++++++|+.+|++|++++++ ++.+.++++|++.+++...
T Consensus       142 ~~l~~~~~ta~~~l~~-~~~----~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~  215 (330)
T cd08245         142 APLLCAGITVYSALRD-AGP----RPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGA  215 (330)
T ss_pred             hhhhhhHHHHHHHHHh-hCC----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCC
Confidence            9999999999999964 677    8999999997 7889999999999999999999855 4567778899888887665


Q ss_pred             hHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccccc
Q psy9949         242 PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELC  321 (383)
Q Consensus       242 ~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (383)
                      ......  ...++|+++|+++........ +++++  ++|+++.++.....     +  ...  ....+         ..
T Consensus       216 ~~~~~~--~~~~~d~vi~~~~~~~~~~~~-~~~l~--~~G~~i~~~~~~~~-----~--~~~--~~~~~---------~~  272 (330)
T cd08245         216 ELDEQA--AAGGADVILVTVVSGAAAEAA-LGGLR--RGGRIVLVGLPESP-----P--FSP--DIFPL---------IM  272 (330)
T ss_pred             cchHHh--ccCCCCEEEECCCcHHHHHHH-HHhcc--cCCEEEEECCCCCC-----c--ccc--chHHH---------Hh
Confidence            444333  224799999998865443333 88999  99999998642111     0  000  00111         11


Q ss_pred             CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      ++..+. +......+.+++++++++++.+.+ ..+.+++++++++++.+.+++..||+|+
T Consensus       273 ~~~~~~-~~~~~~~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         273 KRQSIA-GSTHGGRADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             CCCEEE-EeccCCHHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            111221 122234678899999999999875 4568999999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.7e-32  Score=256.36  Aligned_cols=299  Identities=22%  Similarity=0.269  Sum_probs=224.3

Q ss_pred             ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhc-cCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCC
Q psy9949          39 DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLG-GYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPR  117 (383)
Q Consensus        39 ~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~  117 (383)
                      +++.++ +.+.|+++++||+||+.++++|++|+...+ |...              .....+|.++|+|++|+|+++|++
T Consensus         7 ~~~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~--------------~~~~~~p~~~g~e~~G~v~~vG~~   71 (339)
T cd08232           7 GDLRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFG--------------TVRLREPMVLGHEVSGVVEAVGPG   71 (339)
T ss_pred             CceEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCC--------------cccccCCeecCccceEEEEeeCCC
Confidence            457888 789999999999999999999999998763 3200              011235778999999999999999


Q ss_pred             CCCCCCCCEEEEeec-----------------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHH
Q psy9949         118 VTDLNIDDVVYGVIQ-----------------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYT  168 (383)
Q Consensus       118 v~~~~~Gd~V~~~~~-----------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~  168 (383)
                      +++|++||+|++...                             ...+|+|++|++++.+.++++|+++++++|+. ..+
T Consensus        72 v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~  150 (339)
T cd08232          72 VTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEP  150 (339)
T ss_pred             CCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cch
Confidence            999999999987210                             01359999999999999999999999999876 567


Q ss_pred             HHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCCChHHHH
Q psy9949         169 GLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMH  246 (383)
Q Consensus       169 ~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~  246 (383)
                      +++||+++.... .    .++++|+|.| +|++|++++++|+.+|+ ++++++++ ++.++++++|++.++++++.++..
T Consensus       151 ~~~a~~~l~~~~-~----~~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~  224 (339)
T cd08232         151 LAVALHAVNRAG-D----LAGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAA  224 (339)
T ss_pred             HHHHHHHHHhcC-C----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhh
Confidence            789999986443 3    5789999977 79999999999999999 88888855 455778889999998887655332


Q ss_pred             HHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccE
Q psy9949         247 SIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTI  326 (383)
Q Consensus       247 ~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (383)
                      .....+++|+++|++|+....... +++++  ++|+++.++... ..     .....    ..+         ..++..+
T Consensus       225 ~~~~~~~vd~vld~~g~~~~~~~~-~~~L~--~~G~~v~~g~~~-~~-----~~~~~----~~~---------~~~~~~~  282 (339)
T cd08232         225 YAADKGDFDVVFEASGAPAALASA-LRVVR--PGGTVVQVGMLG-GP-----VPLPL----NAL---------VAKELDL  282 (339)
T ss_pred             hhccCCCccEEEECCCCHHHHHHH-HHHHh--cCCEEEEEecCC-CC-----ccCcH----HHH---------hhcceEE
Confidence            222234699999999864433332 88999  999999986321 00     00000    001         1111122


Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         327 RWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      . +.. ...+.+++++++++++.+++  .+.++|+++++++|++.+.+++..||+|++.
T Consensus       283 ~-~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         283 R-GSF-RFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             E-EEe-cCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            1 111 23567899999999998864  4678899999999999999888889999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=6e-32  Score=251.86  Aligned_cols=317  Identities=26%  Similarity=0.338  Sum_probs=245.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+++.+..++.+..+.++ +.+.|.+++++++||+.++++|++|+....+..+               ....+|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~e   64 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYP---------------PPPGASDILGLE   64 (325)
T ss_pred             CceEEEccCCCcccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---------------CCCCCCCCccce
Confidence            678888877777777777 6677778999999999999999999988766411               112347899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|+++.++++||+|+++..   +|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.+...+    
T Consensus        65 ~~G~v~~vg~~~~~~~~Gd~V~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~----  137 (325)
T TIGR02824        65 VAGEVVAVGEGVSRWKVGDRVCALVA---GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGL----  137 (325)
T ss_pred             eEEEEEEeCCCCCCCCCCCEEEEccC---CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCC----
Confidence            99999999999999999999999853   48999999999999999999999999999999999999998878888    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g  262 (383)
                      +++++++|+|++|++|++++++++..|++|+++++++ +.+.++++|.+.+++....++...+..   ..++|++++++|
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~  217 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVG  217 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCc
Confidence            8999999999999999999999999999999988654 556778889888887776666666553   246999999999


Q ss_pred             CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc----CCHHHH
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM----PIPYAV  338 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  338 (383)
                      +......  +++++  ++|+++.++.......   .  ..    ...+..    ++..+.+.........    ...+.+
T Consensus       218 ~~~~~~~--~~~l~--~~g~~v~~g~~~~~~~---~--~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (325)
T TIGR02824       218 GSYLNRN--IKALA--LDGRIVQIGFQGGRKA---E--LD----LGPLLA----KRLTITGSTLRARPVAEKAAIAAELR  280 (325)
T ss_pred             hHHHHHH--HHhhc--cCcEEEEEecCCCCcC---C--CC----hHHHHh----cCCEEEEEehhhcchhhhHHHHHHHH
Confidence            8655544  88999  9999999864211100   0  00    000101    1112221111000000    013456


Q ss_pred             HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .+++++++++.+.+..++.+++++++++++.+.++...||+++++
T Consensus       281 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       281 EHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            778889999998877888899999999999999888889999875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.1e-32  Score=259.10  Aligned_cols=311  Identities=18%  Similarity=0.235  Sum_probs=226.1

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      +...++...    .++++ +.|.|++++++|+||++++++|++|++...+.....   . .     +.....+|.++|||
T Consensus        29 ~~~~~~~~~----~~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~---~-~-----~~~~~~~~~~~g~e   94 (384)
T cd08265          29 LGSKVWRYP----ELRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGY---I-L-----YPGLTEFPVVIGHE   94 (384)
T ss_pred             ceeEEEeCC----CEEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcc---c-c-----cCcccCCCcccccc
Confidence            444455432    37888 899999999999999999999999998876320000   0 0     00113467899999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCC------
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSN------  156 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~------  156 (383)
                      ++|+|+++|++++.|++||+|++...                        ...+|+|++|+.++.+.++++|++      
T Consensus        95 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~  174 (384)
T cd08265          95 FSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSE  174 (384)
T ss_pred             eEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCcccccccc
Confidence            99999999999999999999986110                        012599999999999999999986      


Q ss_pred             -CCHHHHHhhhHHHHHHHHHHHHh-hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcC
Q psy9949         157 -ISDEEAAGVLYTGLTAWSALQIT-AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLN  232 (383)
Q Consensus       157 -~~~~~aa~l~~~~~tA~~~l~~~-~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg  232 (383)
                       ++.+ +++++.++++||+++... .++    +++++|+|+| +|++|++++++|+.+|+ +|++++++ ++.++++++|
T Consensus       175 ~~~~~-~a~~~~~~~ta~~al~~~~~~~----~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g  248 (384)
T cd08265         175 DKAFE-AGALVEPTSVAYNGLFIRGGGF----RPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMG  248 (384)
T ss_pred             CCCHH-HhhhhhHHHHHHHHHHhhcCCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC
Confidence             3455 556667888999998655 677    8999999996 79999999999999999 79888854 4667889999


Q ss_pred             CCeeeeCCCh---HHHHHHhc---CCCccEEEEcCCCCc-c-cccccccccccCCCceEEEecCCCccCCCCCCCchhhh
Q psy9949         233 PNLVIDYNEP---EAMHSIAG---AGPYDVILDAAGIPL-D-QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLV  304 (383)
Q Consensus       233 ~~~v~~~~~~---~~~~~i~~---~~g~d~v~d~~g~~~-~-~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~  304 (383)
                      ++.++++++.   ++.+.+.+   ..++|+++|++|+.. . ...  +++++  ++|+++.+|....    ...      
T Consensus       249 ~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~--~~~l~--~~G~~v~~g~~~~----~~~------  314 (384)
T cd08265         249 ADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQM--EKSIA--INGKIVYIGRAAT----TVP------  314 (384)
T ss_pred             CCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHH--HHHHH--cCCEEEEECCCCC----CCc------
Confidence            9988887643   55555543   347999999999742 2 333  78999  9999999864211    000      


Q ss_pred             hhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         305 KNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                         +.....      ..++..+...........+.+++++++++.+++  ++.+.|+++++++|++.+.++ ..||+|+
T Consensus       315 ---~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         315 ---LHLEVL------QVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             ---ccHHHH------hhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence               000000      111111111111123457899999999999876  367889999999999997654 5789886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.3e-32  Score=254.44  Aligned_cols=325  Identities=26%  Similarity=0.324  Sum_probs=241.9

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      |++++...+.+..+.++ +.+.|++.+++|+||+.++++|++|+....|..+               ....+|..+|||+
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~e~   64 (337)
T cd08275           1 RAVVLTGFGGLDKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYD---------------SAPKPPFVPGFEC   64 (337)
T ss_pred             CeEEEcCCCCccceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC---------------CCCCCCCCCccee
Confidence            46667766666678887 6777889999999999999999999998876511               1234577899999


Q ss_pred             eEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCC
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP  187 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~  187 (383)
                      +|+|+.+|+++.++++||+|+++..   +|+|++|+.++.+.++++|+++++++++.++++..+||+++....++    +
T Consensus        65 ~G~v~~~g~~~~~~~~G~~V~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~  137 (337)
T cd08275          65 AGTVEAVGEGVKDFKVGDRVMGLTR---FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL----R  137 (337)
T ss_pred             EEEEEEECCCCcCCCCCCEEEEecC---CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC----C
Confidence            9999999999999999999999863   48999999999999999999999999999999999999999878888    8


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~  264 (383)
                      ++++|+|+|++|++|++++++|+.. +..++...++++.+.+.++|.+.+++....++.+.+...  .++|+++|++|+.
T Consensus       138 ~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~  217 (337)
T cd08275         138 PGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE  217 (337)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH
Confidence            9999999998899999999999998 333332223235677788999888888777776666532  5799999999987


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCch--hhhhhHHHHhhhhhccccccCCccEEEEEE----c---CCH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVP--GLVKNAFDLLKSNFESGELCKTNTIRWGFF----M---PIP  335 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~  335 (383)
                      .....  +++++  ++|+++.+|.....+........  ......+.+...    ....++..+.....    .   ...
T Consensus       218 ~~~~~--~~~l~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  289 (337)
T cd08275         218 DTRKS--YDLLK--PMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPM----KLISENKSVLGFNLGWLFEERELLT  289 (337)
T ss_pred             HHHHH--HHhhc--cCcEEEEEeecCCcCcccccccccccccccccccCHH----HHhhcCceEEEeechhhhhChHHHH
Confidence            65444  88999  99999998753322111100000  000000000000    00111111111110    0   112


Q ss_pred             HHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         336 YAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       336 ~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..+.+++++++++.+.+...+.|++++++++++.+.+++..||+++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         290 EVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            457888999999998877778999999999999999888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-32  Score=252.49  Aligned_cols=298  Identities=19%  Similarity=0.175  Sum_probs=225.5

Q ss_pred             ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHh-ccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCC
Q psy9949          39 DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPR  117 (383)
Q Consensus        39 ~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~  117 (383)
                      ++++++ +++.|++.++||+||+.++++|++|+... .|...              ......|.++|+|++|+|+++|++
T Consensus         5 ~~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~--------------~~~~~~~~~~g~e~~G~V~~vG~~   69 (312)
T cd08269           5 GRFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPW--------------FVYPAEPGGPGHEGWGRVVALGPG   69 (312)
T ss_pred             CeeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCC--------------cccCCCCcccceeeEEEEEEECCC
Confidence            357888 78999999999999999999999999887 55410              011234788999999999999999


Q ss_pred             CCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcC
Q psy9949         118 VTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGA  197 (383)
Q Consensus       118 v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga  197 (383)
                      ++++++||+|+++.    .|+|++|+.++.+.++++|+++  ..++....++.+|++++. ..++    +++++|+|+| 
T Consensus        70 v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~----~~~~~vlI~g-  137 (312)
T cd08269          70 VRGLAVGDRVAGLS----GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWI----RAGKTVAVIG-  137 (312)
T ss_pred             CcCCCCCCEEEEec----CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCC----CCCCEEEEEC-
Confidence            99999999999986    3999999999999999999998  233332367788999987 7787    8999999997 


Q ss_pred             CchHHHHHHHHHHHCCCE-EEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccc
Q psy9949         198 SGGVGTMAVQLLKAWDIE-VVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYL  272 (383)
Q Consensus       198 ~g~vG~~ai~la~~~G~~-Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~  272 (383)
                      +|++|++++++|+.+|++ |+++.+++ +.++++++|++.+++++..++.+.+.+.   .++|+++||+|+....... +
T Consensus       138 ~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~-~  216 (312)
T cd08269         138 AGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLA-G  216 (312)
T ss_pred             CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHH-H
Confidence            799999999999999998 98888654 5677888999888887776777766543   4799999999876443332 8


Q ss_pred             cccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc
Q psy9949         273 PFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP  352 (383)
Q Consensus       273 ~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  352 (383)
                      ++++  ++|+++.++... ..  ...+    ....+.+....+      .+...  .......+.+++++++++++.+++
T Consensus       217 ~~l~--~~g~~~~~g~~~-~~--~~~~----~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~  279 (312)
T cd08269         217 ELVA--ERGRLVIFGYHQ-DG--PRPV----PFQTWNWKGIDL------INAVE--RDPRIGLEGMREAVKLIADGRLDL  279 (312)
T ss_pred             HHhc--cCCEEEEEccCC-CC--Cccc----CHHHHhhcCCEE------EEecc--cCccchhhHHHHHHHHHHcCCCCc
Confidence            8999  999999986432 00  0000    001111111111      11000  001112578999999999999876


Q ss_pred             --ccceeecCCCHHHHHHHHhcCCC-CCeEEE
Q psy9949         353 --VIDSKYNFCELPTAFEKVQQGHL-RGKIIL  381 (383)
Q Consensus       353 --~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl  381 (383)
                        .+.+.|++++++++++.+.+++. .+|+++
T Consensus       280 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         280 GSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             hhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence              45778999999999999988865 478876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9e-32  Score=251.00  Aligned_cols=320  Identities=24%  Similarity=0.280  Sum_probs=245.4

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||++++...+.+..++++ +.+.|.+.+++++|+|.++++|+.|+....|...               ....+|.++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~---------------~~~~~~~~~g~e   64 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI---------------EPPPLPARLGYE   64 (328)
T ss_pred             CeEEEEeccCCcceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccC---------------CCCCCCCCCCcc
Confidence            688899887777778888 7888889999999999999999999988766411               113447789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec--CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ--PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~--~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      ++|+|+.+|+++.++++||+|+++..  ....|++++|+.++.+.++++|+++++++++.+++.+.+||+++.....+  
T Consensus        65 ~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~--  142 (328)
T cd08268          65 AAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGL--  142 (328)
T ss_pred             eEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCC--
Confidence            99999999999999999999998742  12348999999999999999999999999999999999999999877887  


Q ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEc
Q psy9949         185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDA  260 (383)
Q Consensus       185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~  260 (383)
                        +++++++|+|++|++|++++++++..|+++++++++ ++.+.++++|.+.+++.+..++...+.+.   .++|+++++
T Consensus       143 --~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (328)
T cd08268         143 --RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP  220 (328)
T ss_pred             --CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence              889999999999999999999999999999999855 45667778888888887776666655432   379999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE--cCCHHHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF--MPIPYAV  338 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  338 (383)
                      +|+......  +++++  ++|+++.++...... .  .+.     ....+ .    +...+.+........  ....+.+
T Consensus       221 ~~~~~~~~~--~~~l~--~~g~~v~~g~~~~~~-~--~~~-----~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~  283 (328)
T cd08268         221 VGGPQFAKL--ADALA--PGGTLVVYGALSGEP-T--PFP-----LKAAL-K----KSLTFRGYSLDEITLDPEARRRAI  283 (328)
T ss_pred             CchHhHHHH--HHhhc--cCCEEEEEEeCCCCC-C--CCc-----hHHHh-h----cCCEEEEEecccccCCHHHHHHHH
Confidence            998655555  88999  999999886432110 0  000     00000 0    011111111000000  0113456


Q ss_pred             HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.+.+++.++.+.+...+.|++++++++++.+.+++..||++++.
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         284 AFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             HHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            666777888888777778899999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=4.4e-32  Score=255.04  Aligned_cols=305  Identities=22%  Similarity=0.300  Sum_probs=226.5

Q ss_pred             eecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEE
Q psy9949          33 SSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIV  112 (383)
Q Consensus        33 ~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv  112 (383)
                      ++++.+  ++++ +.|.|+++++||+||+.++++|++|+.+..+...      .       .....+|.++|+|++|+|+
T Consensus         5 ~~~~~~--~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~------~-------~~~~~~~~~~g~e~~G~V~   68 (340)
T TIGR00692         5 TKPGYG--AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEW------A-------QSRIKPPQVVGHEVAGEVV   68 (340)
T ss_pred             ccCCCC--cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCC------C-------CCCCCCCcccccceEEEEE
Confidence            355655  6777 7899999999999999999999999987755310      0       0112356789999999999


Q ss_pred             ecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHH
Q psy9949         113 AKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYT  168 (383)
Q Consensus       113 ~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~  168 (383)
                      ++|+++++|++||+|++...                        ....|+|++|++++.+.++++|++++.+++ +++..
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~  147 (340)
T TIGR00692        69 GIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEP  147 (340)
T ss_pred             EECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcch
Confidence            99999999999999987310                        113589999999999999999999998655 56677


Q ss_pred             HHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCeeeeCCChHHHH
Q psy9949         169 GLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMH  246 (383)
Q Consensus       169 ~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~  246 (383)
                      +.+|++++.  ..+    +++++|+|.| +|++|++++++|+.+|++ |+++.++ ++.++++++|++.++++...++.+
T Consensus       148 ~~~a~~~~~--~~~----~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~  220 (340)
T TIGR00692       148 LGNAVHTVL--AGP----ISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVK  220 (340)
T ss_pred             HHHHHHHHH--ccC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHH
Confidence            888998863  345    7899999976 799999999999999996 8888544 356777889998888887777777


Q ss_pred             HHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCC
Q psy9949         247 SIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT  323 (383)
Q Consensus       247 ~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (383)
                      .+.+   ..++|+++|++|+....... +++++  ++|+++.+|....    ....  . ....+           ..++
T Consensus       221 ~l~~~~~~~~~d~vld~~g~~~~~~~~-~~~l~--~~g~~v~~g~~~~----~~~~--~-~~~~~-----------~~~~  279 (340)
T TIGR00692       221 EVADLTDGEGVDVFLEMSGAPKALEQG-LQAVT--PGGRVSLLGLPPG----KVTI--D-FTNKV-----------IFKG  279 (340)
T ss_pred             HHHHhcCCCCCCEEEECCCCHHHHHHH-HHhhc--CCCEEEEEccCCC----Cccc--c-hhhhh-----------hhcc
Confidence            6654   34799999998875443332 88999  9999999864310    0000  0 00011           1111


Q ss_pred             ccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         324 NTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..+.........+.+.++++++++++++  +.+.+.++++++.++++.+.+++. ||+|+++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       280 LTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             eEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            1111111112345678899999999986  457889999999999999988874 9999874

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=6.4e-32  Score=249.30  Aligned_cols=298  Identities=24%  Similarity=0.307  Sum_probs=230.2

Q ss_pred             CCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEE
Q psy9949          49 TPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVY  128 (383)
Q Consensus        49 ~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~  128 (383)
                      .|++.+++++||+.++++|++|+....|..+               ....+|.++|+|++|+|+++|+++.+|++||+|+
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~   66 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP---------------TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVI   66 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCC---------------CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEE
Confidence            5778999999999999999999998877511               1124578999999999999999999999999999


Q ss_pred             EeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHH
Q psy9949         129 GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL  208 (383)
Q Consensus       129 ~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~l  208 (383)
                      ++.. ..+|+|++|++++.+.++++|+++++++++.++..+++||+++. ...+    +++++|+|++++|++|++++++
T Consensus        67 ~~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~----~~g~~vli~~~~~~~g~~~~~~  140 (303)
T cd08251          67 AGTG-ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGL----AKGEHILIQTATGGTGLMAVQL  140 (303)
T ss_pred             EecC-CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCC----CCCCEEEEecCCcHHHHHHHHH
Confidence            8863 23589999999999999999999999999999999999999985 7777    9999999999999999999999


Q ss_pred             HHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEE
Q psy9949         209 LKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFV  284 (383)
Q Consensus       209 a~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v  284 (383)
                      ++.+|++|++++++ ++.+.++++|++.+++....++.+.+..   ..++|+++|++++......  +++++  ++|+++
T Consensus       141 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~--~~~l~--~~g~~v  216 (303)
T cd08251         141 ARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKG--LNCLA--PGGRYV  216 (303)
T ss_pred             HHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHH--HHHhc--cCcEEE
Confidence            99999999999865 4567778899999998877777666653   3479999999987655555  88999  999999


Q ss_pred             EecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHH
Q psy9949         285 TLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELP  364 (383)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~  364 (383)
                      .++...........  ......+..+..      ..+.+...  .......+.+.++.++++++.+++...+.|++++++
T Consensus       217 ~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  286 (303)
T cd08251         217 EIAMTALKSAPSVD--LSVLSNNQSFHS------VDLRKLLL--LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIG  286 (303)
T ss_pred             EEeccCCCccCccC--hhHhhcCceEEE------EehHHhhh--hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHH
Confidence            88643211110000  000000000000      00000000  000012456788999999999988788899999999


Q ss_pred             HHHHHHhcCCCCCeEEE
Q psy9949         365 TAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       365 ~a~~~l~~~~~~gkvvl  381 (383)
                      ++++.+.+++..||+++
T Consensus       287 ~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         287 EAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHhCCCcceEeC
Confidence            99999999888889874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.2e-30  Score=242.83  Aligned_cols=313  Identities=26%  Similarity=0.349  Sum_probs=242.4

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCC-CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      |+|+++..++.+..+.+. +.+ |.+. +++++|++.++++|++|+....|...               .....|..+||
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~g~   63 (323)
T cd08241           1 MKAVVCKELGGPEDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQ---------------VKPPLPFVPGS   63 (323)
T ss_pred             CeEEEEecCCCcceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCC---------------CCCCCCCcccc
Confidence            688888877777778887 667 7666 59999999999999999998876511               11234678999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV  185 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~  185 (383)
                      |++|+|+.+|+++..+++||+|+++..   .|++++|+.++.+.++++|+++++.+++.+...+.+||+++.+...+   
T Consensus        64 e~~G~v~~~g~~~~~~~~G~~V~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~---  137 (323)
T cd08241          64 EVAGVVEAVGEGVTGFKVGDRVVALTG---QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARL---  137 (323)
T ss_pred             eeEEEEEEeCCCCCCCCCCCEEEEecC---CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC---
Confidence            999999999999999999999999862   38999999999999999999999999999999999999999877887   


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcC
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAA  261 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~  261 (383)
                       +++++|+|+|++|++|++++++|+..|++|++++++ ++.+.++++|++.+++....++.+.+...   .++|.+++++
T Consensus       138 -~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~  216 (323)
T cd08241         138 -QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPV  216 (323)
T ss_pred             -CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECc
Confidence             899999999988999999999999999999999855 45677788898888887776666666542   4799999999


Q ss_pred             CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-----CCHH
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-----PIPY  336 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  336 (383)
                      |+......  +++++  ++|+++.++......        ...... .....    .....+...  ....     ...+
T Consensus       217 g~~~~~~~--~~~~~--~~g~~v~~~~~~~~~--------~~~~~~-~~~~~----~~~~~~~~~--~~~~~~~~~~~~~  277 (323)
T cd08241         217 GGDVFEAS--LRSLA--WGGRLLVIGFASGEI--------PQIPAN-LLLLK----NISVVGVYW--GAYARREPELLRA  277 (323)
T ss_pred             cHHHHHHH--HHhhc--cCCEEEEEccCCCCc--------CcCCHH-HHhhc----CcEEEEEec--ccccchhHHHHHH
Confidence            98554444  88999  999999885321000        000000 00011    111111110  0000     0236


Q ss_pred             HHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         337 AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       337 ~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      .+.+++++++++.+.+...+.|+++++.++++.+.++...||++++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         278 NLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            7788999999999887788899999999999999888888898874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.9e-31  Score=242.09  Aligned_cols=275  Identities=22%  Similarity=0.297  Sum_probs=212.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||+++..+.+ +..++++ +++.|++.+++|+||+.++++|++|+....|..                .....|.++|+|
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~----------------~~~~~p~~~G~e   62 (306)
T cd08258           1 MKALVKTGPG-PGNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDY----------------DPVETPVVLGHE   62 (306)
T ss_pred             CeeEEEecCC-CCceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCC----------------CcCCCCeeeccc
Confidence            5788887643 4568898 899999999999999999999999998887751                123457889999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++++.|++||+|+++..                         ....|+|++|++++.+.++++|+++++++
T Consensus        63 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~  142 (306)
T cd08258          63 FSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEA  142 (306)
T ss_pred             eEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHH
Confidence            99999999999999999999988642                         01248999999999999999999999998


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc--hHHHHHhcCCCeeee
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD--AKDLVTSLNPNLVID  238 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~--~~~~~~~lg~~~v~~  238 (383)
                      ++ ++..+++||+++...+++    +++++|+|.| +|++|++++++|+.+|++|+++. +++  +.++++++|++.+ +
T Consensus       143 aa-~~~~~~~a~~~l~~~~~~----~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~  215 (306)
T cd08258         143 AA-LTEPLAVAVHAVAERSGI----RPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-N  215 (306)
T ss_pred             HH-hhchHHHHHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-C
Confidence            87 667888999999878888    8999999976 89999999999999999988874 222  4567788999888 8


Q ss_pred             CCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949         239 YNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF  315 (383)
Q Consensus       239 ~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (383)
                      +...++.+.+..   ..++|+++|++|+....... +++++  ++|+++.++... ..             ...+.... 
T Consensus       216 ~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~-~~-------------~~~~~~~~-  277 (306)
T cd08258         216 GGEEDLAELVNEITDGDGADVVIECSGAVPALEQA-LELLR--KGGRIVQVGIFG-PL-------------AASIDVER-  277 (306)
T ss_pred             CCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHH-HHHhh--cCCEEEEEcccC-CC-------------CcccCHHH-
Confidence            777777766654   24799999999865443332 88999  999999986531 00             00111011 


Q ss_pred             ccccccCCccEEEEEEcCCHHHHHHHHHHHHcC
Q psy9949         316 ESGELCKTNTIRWGFFMPIPYAVKEINKFIERG  348 (383)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  348 (383)
                         +..++..++ +....+.+++++++++++.|
T Consensus       278 ---~~~~~~~i~-g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         278 ---IIQKELSVI-GSRSSTPASWETALRLLASG  306 (306)
T ss_pred             ---HhhcCcEEE-EEecCchHhHHHHHHHHhcC
Confidence               122333433 34445688899999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=3.1e-30  Score=236.23  Aligned_cols=287  Identities=26%  Similarity=0.302  Sum_probs=222.7

Q ss_pred             CeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCC
Q psy9949          55 KDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPH  134 (383)
Q Consensus        55 ~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~  134 (383)
                      +||+||+.++++|++|++...|.                .  ..+|.++|||++|+|+++|+++.++++||+|+++.   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~----------------~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~---   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGL----------------L--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA---   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCC----------------C--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---
Confidence            58999999999999999988764                1  23467899999999999999999999999999986   


Q ss_pred             CCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q psy9949         135 KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI  214 (383)
Q Consensus       135 ~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~  214 (383)
                       .|+|++|+.++.+.++++|+++++.+++.+++++.+||+++.+...+    +++++|+|+|++|++|++++++|+.+|+
T Consensus        60 -~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~g~~vlv~g~~g~~g~~~~~~a~~~g~  134 (293)
T cd05195          60 -PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL----QKGESVLIHAAAGGVGQAAIQLAQHLGA  134 (293)
T ss_pred             -cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc----CCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence             49999999999999999999999999999999999999999877888    9999999999999999999999999999


Q ss_pred             EEEEEecC-chHHHHHhcC--CCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         215 EVVTTCSG-DAKDLVTSLN--PNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       215 ~Vi~~~~~-~~~~~~~~lg--~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +|++++++ ++.+.+++++  ++.++++...++.+++.+   ..++|+++|++|+......  +++++  ++|+++.++.
T Consensus       135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~--~~~l~--~~g~~v~~g~  210 (293)
T cd05195         135 EVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRAS--WRCLA--PFGRFVEIGK  210 (293)
T ss_pred             EEEEEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHH--HHhcc--cCceEEEeec
Confidence            99999866 4567777777  677888877777776654   2479999999998854544  89999  9999998864


Q ss_pred             CCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHH
Q psy9949         289 PFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFE  368 (383)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~  368 (383)
                      ....+..  ............+.      ...+.+...  .......+.+.++.++++++++.+...+.+++++++++++
T Consensus       211 ~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  280 (293)
T cd05195         211 RDILSNS--KLGMRPFLRNVSFS------SVDLDQLAR--ERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFR  280 (293)
T ss_pred             cccccCC--ccchhhhccCCeEE------EEeHHHHhh--hChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHH
Confidence            3211100  00000000000000      000000000  0001124567889999999999888888899999999999


Q ss_pred             HHhcCCCCCeEEE
Q psy9949         369 KVQQGHLRGKIIL  381 (383)
Q Consensus       369 ~l~~~~~~gkvvl  381 (383)
                      .+.+++..||+++
T Consensus       281 ~~~~~~~~~~ivv  293 (293)
T cd05195         281 LMQSGKHIGKVVL  293 (293)
T ss_pred             HHhcCCCCceecC
Confidence            9998888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=3.4e-29  Score=229.02  Aligned_cols=279  Identities=27%  Similarity=0.357  Sum_probs=216.2

Q ss_pred             EEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCC
Q psy9949          59 VEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGS  138 (383)
Q Consensus        59 Vkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~  138 (383)
                      ||+.++++|++|++...|.                   ...|.++|||++|+|+++|++++.|++||+|+++.    .|+
T Consensus         2 i~v~~~~i~~~d~~~~~g~-------------------~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----~g~   58 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGL-------------------LPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----PGS   58 (288)
T ss_pred             eeEEEEecCHHHHHHhcCC-------------------CCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----CCc
Confidence            8999999999999988765                   11357899999999999999999999999999986    399


Q ss_pred             ceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE
Q psy9949         139 FSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT  218 (383)
Q Consensus       139 ~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~  218 (383)
                      |++|+.++.+.++++|+++++++++.+++.+.++|+++.+...+    +++++|+|+|++|++|++++++|+..|++|++
T Consensus        59 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~  134 (288)
T smart00829       59 FATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARL----RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFA  134 (288)
T ss_pred             eeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCC----CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEE
Confidence            99999999999999999999999999999999999999777888    89999999999999999999999999999999


Q ss_pred             EecC-chHHHHHhcCC--CeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCcc
Q psy9949         219 TCSG-DAKDLVTSLNP--NLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLK  292 (383)
Q Consensus       219 ~~~~-~~~~~~~~lg~--~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~  292 (383)
                      ++++ ++.+.++++|+  +.++++...++.+++.+.   .++|+++|++|+......  +++++  ++|+++.++.....
T Consensus       135 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~--~~~l~--~~g~~v~~g~~~~~  210 (288)
T smart00829      135 TAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDAS--LRCLA--PGGRFVEIGKRDIR  210 (288)
T ss_pred             EeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHH--HHhcc--CCcEEEEEcCcCCc
Confidence            9954 56777888998  678887776676666542   469999999997554444  88999  99999998643211


Q ss_pred             CCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc--CCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHH
Q psy9949         293 NTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM--PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKV  370 (383)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l  370 (383)
                      +...           ++...  +.+....++..+......  ...+.+.+++++++++++.+...+.|++++++++++.+
T Consensus       211 ~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (288)
T smart00829      211 DNSQ-----------LGMAP--FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYM  277 (288)
T ss_pred             cccc-----------cchhh--hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHH
Confidence            1000           00000  000111111000000000  12346788889999998877667789999999999999


Q ss_pred             hcCCCCCeEEE
Q psy9949         371 QQGHLRGKIIL  381 (383)
Q Consensus       371 ~~~~~~gkvvl  381 (383)
                      ..++..||+++
T Consensus       278 ~~~~~~~~ivv  288 (288)
T smart00829      278 QQGKHIGKVVL  288 (288)
T ss_pred             hcCCCcceEeC
Confidence            98887788774

Enoylreductase in Polyketide synthases.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.97  E-value=1.2e-29  Score=231.85  Aligned_cols=233  Identities=20%  Similarity=0.241  Sum_probs=174.9

Q ss_pred             cccCceeEEEEecCCCCC------CCCCCCEEEEeec------------------C-------------CCCCCceEEEe
Q psy9949         102 TLGRDFCGKIVAKGPRVT------DLNIDDVVYGVIQ------------------P-------------HKQGSFSKLIL  144 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~------------------~-------------~~~g~~a~~~~  144 (383)
                      ++|||++|+|+++|++|+      +|++||||+....                  .             ..+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999999      8999999975311                  0             12599999999


Q ss_pred             ecCc-ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec-
Q psy9949         145 ADSA-LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS-  221 (383)
Q Consensus       145 v~~~-~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~-  221 (383)
                      +|.+ .++++|+++++++++++++.+.|||+++. ....    .++++|+|+| +|++|++++|+|+.+|++ |+++.+ 
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~----~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~~  154 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGD----LKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADPS  154 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            9997 79999999999999999999999999997 4445    7899999998 699999999999999995 888874 


Q ss_pred             CchHHHHHhcCCCeeeeCCChHHHHHHh---cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCC
Q psy9949         222 GDAKDLVTSLNPNLVIDYNEPEAMHSIA---GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG  298 (383)
Q Consensus       222 ~~~~~~~~~lg~~~v~~~~~~~~~~~i~---~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~  298 (383)
                      +++.++++++|++.++++.+.  .+.+.   ...++|++||++|++.....+ +++++  ++|+++.+|.....      
T Consensus       155 ~~r~~~a~~~Ga~~~i~~~~~--~~~~~~~~~~~g~d~vid~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~~~------  223 (280)
T TIGR03366       155 PDRRELALSFGATALAEPEVL--AERQGGLQNGRGVDVALEFSGATAAVRAC-LESLD--VGGTAVLAGSVFPG------  223 (280)
T ss_pred             HHHHHHHHHcCCcEecCchhh--HHHHHHHhCCCCCCEEEECCCChHHHHHH-HHHhc--CCCEEEEeccCCCC------
Confidence            456789999999988876542  23332   234799999999987654443 88999  99999998642100      


Q ss_pred             CchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcC--Cc--ccccceeecCCCH
Q psy9949         299 LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG--QI--KPVIDSKYNFCEL  363 (383)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~l--~~~~~~~~~l~~~  363 (383)
                         .    ..++....+    ..++..+ .+....+.+++++++++++++  ++  +.+++++|||+++
T Consensus       224 ---~----~~~i~~~~~----~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       224 ---G----PVALDPEQV----VRRWLTI-RGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             ---C----ceeeCHHHH----HhCCcEE-EecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence               0    001111111    1122222 233344578899999999974  43  3578999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>KOG1202|consensus

Probab=99.96  E-value=6.2e-30  Score=251.79  Aligned_cols=303  Identities=18%  Similarity=0.247  Sum_probs=244.0

Q ss_pred             CCCceeEeeccccCC---CCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEE
Q psy9949          36 GGADELQFNDNVKTP---ILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIV  112 (383)
Q Consensus        36 g~~~~l~~~~~~~~p---~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv  112 (383)
                      |+...|+|. +.|..   +..++.=+.-|.|+.||..|++...|+-+     ...+|    ..-....+++|-|++|+  
T Consensus      1424 GDlsSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~-----~DAiP----G~~a~qdclLGmEFsGR-- 1491 (2376)
T KOG1202|consen 1424 GDLSSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLS-----PDAIP----GDLASQDCLLGMEFSGR-- 1491 (2376)
T ss_pred             ccccceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCC-----cccCC----Cccchhhheeceeeccc--
Confidence            566677887 56643   45688888999999999999999998721     01112    22234467899999997  


Q ss_pred             ecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEE
Q psy9949         113 AKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRV  192 (383)
Q Consensus       113 ~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~V  192 (383)
                              .+-|.||+++.+   .-++|+-+.++.+++|.+|+...+++|+..|+.+.||||+|..++..    ++|+++
T Consensus      1492 --------d~~GrRvM~mvp---AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~m----kkGeki 1556 (2376)
T KOG1202|consen 1492 --------DASGRRVMGMVP---AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQM----KKGEKI 1556 (2376)
T ss_pred             --------cCCCcEEEEeee---hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccc----cCCcEE
Confidence                    456999999986   47899999999999999999999999999999999999999989988    999999


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHH----hcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCC
Q psy9949         193 LVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVT----SLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIP  264 (383)
Q Consensus       193 lI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~----~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~  264 (383)
                      |||+|+|++|++||.+|.++|++|+.++ +.++++++.    ++...++-|+++.+|...+..   +.|+|+|++....+
T Consensus      1557 LIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeE 1636 (2376)
T KOG1202|consen 1557 LIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEE 1636 (2376)
T ss_pred             EEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHH
Confidence            9999999999999999999999999999 556677664    345667788999999988764   35899999999988


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKF  344 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  344 (383)
                      ....+  ++|++  .+|||..+|..++++.++.|.  ..+-.+.+|....+            -..++...++..++..+
T Consensus      1637 kLQAS--iRCLa--~~GRFLEIGKfDLSqNspLGM--avfLkNvsfHGiLL------------Dsvmege~e~~~ev~~L 1698 (2376)
T KOG1202|consen 1637 KLQAS--IRCLA--LHGRFLEIGKFDLSQNSPLGM--AVFLKNVSFHGILL------------DSVMEGEEEMWREVAAL 1698 (2376)
T ss_pred             HHHHH--HHHHH--hcCeeeeecceecccCCcchh--hhhhcccceeeeeh------------hhhhcCcHHHHHHHHHH
Confidence            87777  99999  999999999887777665542  11112222222222            12334567888888888


Q ss_pred             HHcC----CcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         345 IERG----QIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       345 ~~~g----~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++|    ..+|+.+++|+-+++++||+.|.+++++||+|+++
T Consensus      1699 v~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1699 VAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             HHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence            8876    57889999999999999999999999999999975

>KOG1196|consensus

Probab=99.96  E-value=6.7e-27  Score=202.41  Aligned_cols=298  Identities=18%  Similarity=0.195  Sum_probs=214.9

Q ss_pred             CCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEE
Q psy9949          50 PILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYG  129 (383)
Q Consensus        50 p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~  129 (383)
                      .++++++||||.+|.+..|.-...++--.+           .+|.+...+-...-..++|+|++  ++..++++||.|.+
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~-----------~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g   99 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDP-----------SDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWG   99 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCc-----------ccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEE
Confidence            457899999999999999876544432211           11122222211122378999999  56678999999999


Q ss_pred             eecCCCCCCceEEEeecCc--ccccCC--CCCCHHHHH-hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHH
Q psy9949         130 VIQPHKQGSFSKLILADSA--LVHKKP--SNISDEEAA-GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTM  204 (383)
Q Consensus       130 ~~~~~~~g~~a~~~~v~~~--~~~~ip--~~~~~~~aa-~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~  204 (383)
                      +.      +|.||.+++.+  ..++++  .++++.-.. .+..+++|||.++.+....    ++|++|+|.||+|++|++
T Consensus       100 ~~------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p----k~geTv~VSaAsGAvGql  169 (343)
T KOG1196|consen  100 IV------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP----KKGETVFVSAASGAVGQL  169 (343)
T ss_pred             ec------cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC----CCCCEEEEeeccchhHHH
Confidence            96      69999999765  334443  344444333 3457889999999999998    999999999999999999


Q ss_pred             HHHHHHHCCCEEEEEe-cCchHHHH-HhcCCCeeeeCCCh-HHHHHHhcC--CCccEEEEcCCCCcccccccccccccCC
Q psy9949         205 AVQLLKAWDIEVVTTC-SGDAKDLV-TSLNPNLVIDYNEP-EAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGK  279 (383)
Q Consensus       205 ai~la~~~G~~Vi~~~-~~~~~~~~-~~lg~~~v~~~~~~-~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~  279 (383)
                      +.|+|+.+|++|++++ ++++.+++ +++|.|..+||+++ +..+.+.+.  .|+|+.||.+|+......  +..|.  .
T Consensus       170 ~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDav--l~nM~--~  245 (343)
T KOG1196|consen  170 VGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAV--LLNMN--L  245 (343)
T ss_pred             HHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHH--HHhhh--h
Confidence            9999999999999999 45566766 56899999999997 777777764  589999999999987776  88889  9


Q ss_pred             CceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeec
Q psy9949         280 FSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYN  359 (383)
Q Consensus       280 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  359 (383)
                      .||++.+|.-...+.+..   .+ .++...+..    +++.+.|... ..+.....+.++.+..++++|+|+..-+-.-.
T Consensus       246 ~gri~~CG~ISqYN~~~~---~~-~~~l~~ii~----Kr~~iqgflv-~d~~d~~~k~ld~l~~~ikegKI~y~edi~~G  316 (343)
T KOG1196|consen  246 HGRIAVCGMISQYNLENP---EG-LHNLSTIIY----KRIRIQGFLV-SDYLDKYPKFLDFLLPYIKEGKITYVEDIADG  316 (343)
T ss_pred             ccceEeeeeehhccccCC---cc-ccchhhhee----eeEEeeeEEe-echhhhhHHHHHHHHHHHhcCceEEehhHHHH
Confidence            999999974222221100   00 111111111    2223333211 12223357888999999999999775554557


Q ss_pred             CCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         360 FCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       360 l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      |++.++||.-|.++++.||.++++
T Consensus       317 len~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  317 LENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             HhccHHHHHHHhccCcccceEEEe
Confidence            999999999999999999998874

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=5.5e-27  Score=212.83  Aligned_cols=209  Identities=31%  Similarity=0.411  Sum_probs=176.7

Q ss_pred             eEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecC--
Q psy9949          56 DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP--  133 (383)
Q Consensus        56 eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--  133 (383)
                      ||+|+|.++++|+.|+....|..+               ....+|.++|||++|+|+++|++++.|++||+|+++...  
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~---------------~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~   65 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP---------------PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGC   65 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC---------------cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCC
Confidence            689999999999999998887511               123457889999999999999999999999999987521  


Q ss_pred             ------------------CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEE
Q psy9949         134 ------------------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL  195 (383)
Q Consensus       134 ------------------~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~  195 (383)
                                        ...|+|++|+.++.+.++++|+++++++++.++.++.|||+++.....+    +++++|+|+
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~----~~~~~vli~  141 (271)
T cd05188          66 GTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVL----KPGDTVLVL  141 (271)
T ss_pred             CCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCC----CCCCEEEEE
Confidence                              1259999999999999999999999999999999999999999877777    889999999


Q ss_pred             cCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHh--cCCCccEEEEcCCC-Cccccccc
Q psy9949         196 GASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIA--GAGPYDVILDAAGI-PLDQINSY  271 (383)
Q Consensus       196 ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~--~~~g~d~v~d~~g~-~~~~~~~~  271 (383)
                      |+++ +|++++++++..|.+|++++++ ++.+.++++|++.++++.+.++.+.+.  ...++|++++++++ ......  
T Consensus       142 g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~--  218 (271)
T cd05188         142 GAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQA--  218 (271)
T ss_pred             CCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHH--
Confidence            9666 9999999999999999999965 466778889988888877766655543  23579999999998 443444  


Q ss_pred             ccccccCCCceEEEecC
Q psy9949         272 LPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       272 ~~~l~~~~~G~~v~~~~  288 (383)
                      +++++  ++|+++.++.
T Consensus       219 ~~~l~--~~G~~v~~~~  233 (271)
T cd05188         219 LRLLR--PGGRIVVVGG  233 (271)
T ss_pred             HHhcc--cCCEEEEEcc
Confidence            88999  9999999864

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.94  E-value=4.7e-26  Score=207.89  Aligned_cols=250  Identities=23%  Similarity=0.306  Sum_probs=186.6

Q ss_pred             CCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHH
Q psy9949          97 LEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSAL  176 (383)
Q Consensus        97 ~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l  176 (383)
                      .++|.++|||++|+|+++|+++++|++||+|+++      +.|++|+.++.+.++++|+++++++++.+ ++++|||+++
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~   90 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV   90 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH
Confidence            4588999999999999999999999999999987      46999999999999999999999999988 7899999998


Q ss_pred             HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcC-CCeeeeCCChHHHHHHhcCCC
Q psy9949         177 QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLN-PNLVIDYNEPEAMHSIAGAGP  253 (383)
Q Consensus       177 ~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg-~~~v~~~~~~~~~~~i~~~~g  253 (383)
                      . ..++    +++++++|+| +|++|++++++|+.+|++ |++++++ ++.++++++| ++.+++....     .....+
T Consensus        91 ~-~~~~----~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~  159 (277)
T cd08255          91 R-DAEP----RLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTAD-----EIGGRG  159 (277)
T ss_pred             H-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchh-----hhcCCC
Confidence            6 6787    8999999997 799999999999999997 9999855 5667888898 5555544321     123457


Q ss_pred             ccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEE-EEE-
Q psy9949         254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW-GFF-  331 (383)
Q Consensus       254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  331 (383)
                      +|++||+++........ +++++  ++|+++.++..... .  ..     ..  ..+.....    .+.+..... ... 
T Consensus       160 ~d~vl~~~~~~~~~~~~-~~~l~--~~g~~~~~g~~~~~-~--~~-----~~--~~~~~~~~----~~~~~~~~~~~~~~  222 (277)
T cd08255         160 ADVVIEASGSPSALETA-LRLLR--DRGRVVLVGWYGLK-P--LL-----LG--EEFHFKRL----PIRSSQVYGIGRYD  222 (277)
T ss_pred             CCEEEEccCChHHHHHH-HHHhc--CCcEEEEEeccCCC-c--cc-----cH--HHHHhccC----eEEeeccccccccc
Confidence            99999998865543332 88999  99999998653211 0  00     00  01111110    111110000 000 


Q ss_pred             ----cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcC-CCCCeEEE
Q psy9949         332 ----MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQG-HLRGKIIL  381 (383)
Q Consensus       332 ----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~-~~~gkvvl  381 (383)
                          ....+.+++++++++++.+++.+.+.|+++++++|++.+.++ ....|+++
T Consensus       223 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         223 RPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             ccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence                012367899999999999988788899999999999999876 23356653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.74  E-value=1e-17  Score=130.43  Aligned_cols=85  Identities=28%  Similarity=0.416  Sum_probs=70.9

Q ss_pred             CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEee--
Q psy9949          54 SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI--  131 (383)
Q Consensus        54 ~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~--  131 (383)
                      |+||||||+++|||++|++++.|..               .....+|.++|||++|+|+++|+++++|++||||+...  
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~---------------~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~   65 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGP---------------PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI   65 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSS---------------SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhcc---------------ccCCCCCcccccceeeeeeeeccccccccccceeeeeccc
Confidence            7899999999999999999998841               24467899999999999999999999999999998631  


Q ss_pred             ----------------------cCCCCCCceEEEeecCcccccC
Q psy9949         132 ----------------------QPHKQGSFSKLILADSALVHKK  153 (383)
Q Consensus       132 ----------------------~~~~~g~~a~~~~v~~~~~~~i  153 (383)
                                            +...+|+||||++++.++++|+
T Consensus        66 ~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   66 GCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             ETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                                  1245799999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.38  E-value=5.5e-13  Score=107.18  Aligned_cols=126  Identities=25%  Similarity=0.322  Sum_probs=93.0

Q ss_pred             hHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCccccccccccc
Q psy9949         200 GVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFL  275 (383)
Q Consensus       200 ~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l  275 (383)
                      ++|++++|+|+.+|++|+++++++ ++++++++|++.++++++.++.+++++.   .++|+||||+|+......+ ++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~-~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEA-IKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHH-HHHE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHH-HHHh
Confidence            589999999999999999999665 7789999999999999999899988864   3799999999966655554 9999


Q ss_pred             ccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949         276 KTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER  347 (383)
Q Consensus       276 ~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (383)
                      +  ++|+++.+|.+.       +.       ...+....    +..++..+ .+....+.++++++++++++
T Consensus        80 ~--~~G~~v~vg~~~-------~~-------~~~~~~~~----~~~~~~~i-~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   80 R--PGGRIVVVGVYG-------GD-------PISFNLMN----LMFKEITI-RGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             E--EEEEEEEESSTS-------TS-------EEEEEHHH----HHHTTEEE-EEESSGGHHHHHHHHHHHH-
T ss_pred             c--cCCEEEEEEccC-------CC-------CCCCCHHH----HHhCCcEE-EEEccCCHHHHHHHHHHhcC
Confidence            9  999999997542       00       01111111    12222233 24444567899999988763

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.38  E-value=2e-12  Score=103.51  Aligned_cols=121  Identities=28%  Similarity=0.418  Sum_probs=75.6

Q ss_pred             cCCCeeeeCCChHHHHHHhcCCCccEEEEcCC--CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHH
Q psy9949         231 LNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG--IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF  308 (383)
Q Consensus       231 lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g--~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~  308 (383)
                      ||++.++||+..++    ...+++|+|||++|  +....... .+++   ++|++|.++.               ....+
T Consensus         1 LGAd~vidy~~~~~----~~~~~~D~ViD~~g~~~~~~~~~~-~~~l---~~G~~v~i~~---------------~~~~~   57 (127)
T PF13602_consen    1 LGADEVIDYRDTDF----AGPGGVDVVIDTVGQTGESLLDAS-RKLL---PGGRVVSIGG---------------DLPSF   57 (127)
T ss_dssp             CT-SEEEETTCSHH----HTTS-EEEEEESS-CCHHHCGGGC-CCTE---EEEEEEEE-S---------------HHHHH
T ss_pred             CCcCEEecCCCccc----cCCCCceEEEECCCCccHHHHHHH-HHHC---CCCEEEEECC---------------cccch
Confidence            68999999998777    44578999999999  43332221 4554   6799988842               00011


Q ss_pred             HHhhhhhccccccCCccEEEEE-Ec---CCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         309 DLLKSNFESGELCKTNTIRWGF-FM---PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      .......  .     ..+.... ..   ...+.++++.+++++|++++.+.++||++++++|++.+++++..||+||
T Consensus        58 ~~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   58 ARRLKGR--S-----IRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHHHHCH--H-----CEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             hhhhccc--c-----eEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            1100000  0     0110000 01   1356799999999999999999999999999999999999999999997

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.96  E-value=5.4e-09  Score=98.89  Aligned_cols=173  Identities=10%  Similarity=0.021  Sum_probs=114.0

Q ss_pred             HHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949         172 AWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       172 A~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~  250 (383)
                      .+.++.+..++   .-+|++|+|.| .|.+|+.+++.++.+|++|+++.. +.+.+.++.+|++.+ +     ..+.+  
T Consensus       188 ~~~~i~r~t~~---~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~~e~v--  255 (413)
T cd00401         188 LIDGIKRATDV---MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----MEEAV--  255 (413)
T ss_pred             hHHHHHHhcCC---CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----HHHHH--
Confidence            34454444333   15899999999 999999999999999999999874 456788888998433 2     12222  


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF  330 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (383)
                       .++|+||+|+|.......+.+++++  ++|+++.+|...               ..+++..... ++..+.+      .
T Consensus       256 -~~aDVVI~atG~~~~i~~~~l~~mk--~GgilvnvG~~~---------------~eId~~~L~~-~el~i~g------~  310 (413)
T cd00401         256 -KEGDIFVTTTGNKDIITGEHFEQMK--DGAIVCNIGHFD---------------VEIDVKGLKE-NAVEVVN------I  310 (413)
T ss_pred             -cCCCEEEECCCCHHHHHHHHHhcCC--CCcEEEEeCCCC---------------CccCHHHHHh-hccEEEE------c
Confidence             3689999999988765544478889  999999985320               0111111100 1111111      1


Q ss_pred             EcCCHH-HHH--HHHHHHHcCCc---cccccee-----ecCC-CHHHHHHHHhcCCCC-CeEEE
Q psy9949         331 FMPIPY-AVK--EINKFIERGQI---KPVIDSK-----YNFC-ELPTAFEKVQQGHLR-GKIIL  381 (383)
Q Consensus       331 ~~~~~~-~~~--~~~~l~~~g~l---~~~~~~~-----~~l~-~~~~a~~~l~~~~~~-gkvvl  381 (383)
                      .....+ .++  ..+.++++|++   ...++|.     ++|+ |+.+++..+.++... -|+++
T Consensus       311 ~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~  374 (413)
T cd00401         311 KPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYF  374 (413)
T ss_pred             cCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEE
Confidence            111112 344  68999999987   4567787     8999 999999999876542 35554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=98.95  E-value=1.8e-08  Score=97.82  Aligned_cols=98  Identities=23%  Similarity=0.279  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCee-eeCCCh-------------HHHHHH---
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLV-IDYNEP-------------EAMHSI---  248 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v-~~~~~~-------------~~~~~i---  248 (383)
                      .++++|+|.| +|.+|+++++.|+.+|++|++++ ++++++.++++|++.+ ++..+.             ++.+..   
T Consensus       163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            5799999999 99999999999999999999998 5567899999999854 554321             222211   


Q ss_pred             -hcC-CCccEEEEcCCCCc-----c-cccccccccccCCCceEEEecC
Q psy9949         249 -AGA-GPYDVILDAAGIPL-----D-QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       249 -~~~-~g~d~v~d~~g~~~-----~-~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                       .+. .++|++|+|+|.+.     . ... .++.++  ++|++++++.
T Consensus       242 ~~~~~~gaDVVIetag~pg~~aP~lit~~-~v~~mk--pGgvIVdvg~  286 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPGKPAPKLITAE-MVASMK--PGSVIVDLAA  286 (509)
T ss_pred             HHhccCCCCEEEECCCCCcccCcchHHHH-HHHhcC--CCCEEEEEcc
Confidence             121 57999999999753     2 122 288999  9999999864

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.95  E-value=4.5e-05  Score=74.22  Aligned_cols=99  Identities=25%  Similarity=0.340  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCee-eeCCC-------------hHHHHH----
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLV-IDYNE-------------PEAMHS----  247 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v-~~~~~-------------~~~~~~----  247 (383)
                      .++++|+|.| +|.+|++++++++.+|++|++++. .++++.++++|++.+ ++..+             .++.+.    
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            3578999999 899999999999999999999884 457788888998754 33211             122211    


Q ss_pred             Hhc-CCCccEEEEcC---CCCc--ccccccccccccCCCceEEEecC
Q psy9949         248 IAG-AGPYDVILDAA---GIPL--DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       248 i~~-~~g~d~v~d~~---g~~~--~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +.+ ..++|++|+|+   |.+.  ......++.++  +++.+|+++.
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MK--pGsvIVDlA~  285 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMK--AGSVIVDLAA  285 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCC--CCCEEEEeee
Confidence            111 25799999999   5433  22222278899  9999998853

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.92  E-value=9.2e-05  Score=70.66  Aligned_cols=104  Identities=15%  Similarity=0.083  Sum_probs=73.4

Q ss_pred             HHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHh
Q psy9949         171 TAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIA  249 (383)
Q Consensus       171 tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~  249 (383)
                      .+|.++.+..++.   -.|++|+|.| .|.+|..+++.++.+|++|+++..+. +...+...|+. +.+     +.+.+ 
T Consensus       197 s~~~ai~rat~~~---l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal-  265 (425)
T PRK05476        197 SLLDGIKRATNVL---IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT-----MEEAA-  265 (425)
T ss_pred             hhHHHHHHhccCC---CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHH-
Confidence            3566766443441   3899999999 89999999999999999999988554 43444445654 221     22222 


Q ss_pred             cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                        .++|++|+++|.........+..++  +++.++..|..
T Consensus       266 --~~aDVVI~aTG~~~vI~~~~~~~mK--~GailiNvG~~  301 (425)
T PRK05476        266 --ELGDIFVTATGNKDVITAEHMEAMK--DGAILANIGHF  301 (425)
T ss_pred             --hCCCEEEECCCCHHHHHHHHHhcCC--CCCEEEEcCCC
Confidence              3799999999987654322377888  88888888654

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.87  E-value=0.00054  Score=62.33  Aligned_cols=151  Identities=17%  Similarity=0.127  Sum_probs=95.1

Q ss_pred             eEEEEecCCCCCCCCCCCEEEEeecCC----------CCC--------------CceEEEeecCcccccCCCCCCHHHHH
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGVIQPH----------KQG--------------SFSKLILADSALVHKKPSNISDEEAA  163 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~----------~~g--------------~~a~~~~v~~~~~~~ip~~~~~~~aa  163 (383)
                      -++|++  +.+.++.+|+||+++.+..          ..+              .|.+|.++..+..+.   .-....-+
T Consensus        38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~---~~~e~~~~  112 (314)
T PF11017_consen   38 FATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD---PEREDWQM  112 (314)
T ss_pred             EEEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC---cchhHHHH
Confidence            377787  8889999999999986520          112              334444444333221   11122222


Q ss_pred             hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEecCchHHHHHhcCC-CeeeeCC
Q psy9949         164 GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLK-AWDI-EVVTTCSGDAKDLVTSLNP-NLVIDYN  240 (383)
Q Consensus       164 ~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~-~~G~-~Vi~~~~~~~~~~~~~lg~-~~v~~~~  240 (383)
                      .+-..+.|.|.. .+...-. .+-..+.|+|..|++-.++.++.+++ ..+. +++++.|..+.++.+++|. |.|+.|+
T Consensus       113 LlrPLf~Tsfll-~d~l~~~-~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd  190 (314)
T PF11017_consen  113 LLRPLFITSFLL-DDFLFDN-DFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGCYDEVLTYD  190 (314)
T ss_pred             HHHHHHHHHHHH-HHHhccc-ccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCCceEEeehh
Confidence            333345555543 2222110 00245789999999999999999988 4554 9999999999999999995 6788776


Q ss_pred             ChHHHHHHhcCCCccEEEEcCCCCccccc
Q psy9949         241 EPEAMHSIAGAGPYDVILDAAGIPLDQIN  269 (383)
Q Consensus       241 ~~~~~~~i~~~~g~d~v~d~~g~~~~~~~  269 (383)
                      +-+..    +....-+++|.+|.......
T Consensus       191 ~i~~l----~~~~~~v~VDfaG~~~~~~~  215 (314)
T PF11017_consen  191 DIDSL----DAPQPVVIVDFAGNGEVLAA  215 (314)
T ss_pred             hhhhc----cCCCCEEEEECCCCHHHHHH
Confidence            52211    11457789999998876433

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.64  E-value=0.00063  Score=62.43  Aligned_cols=91  Identities=21%  Similarity=0.234  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .+++|+|.| .|.+|+.+++.++.+|++|++.+++. +.+.++++|+..+ .+  .++.+.   ..++|+||++++....
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~---l~~aDiVI~t~p~~~i  223 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL--SELAEE---VGKIDIIFNTIPALVL  223 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHH---hCCCCEEEECCChhhh
Confidence            588999999 89999999999999999999998664 5566777886533 21  122222   2479999999875543


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ... .++.++  +++.+++++.
T Consensus       224 ~~~-~l~~~~--~g~vIIDla~  242 (296)
T PRK08306        224 TKE-VLSKMP--PEALIIDLAS  242 (296)
T ss_pred             hHH-HHHcCC--CCcEEEEEcc
Confidence            322 266788  8888988853

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.62  E-value=0.0004  Score=65.97  Aligned_cols=91  Identities=14%  Similarity=-0.002  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      ..|++|+|.| .|.+|+.+++.++.+|++|+++..+ .+...+...|+. +.+     ..+.+   .+.|++|+++|...
T Consensus       193 l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal---~~aDVVItaTG~~~  262 (406)
T TIGR00936       193 IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAA---KIGDIFITATGNKD  262 (406)
T ss_pred             CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHH---hcCCEEEECCCCHH
Confidence            5799999999 9999999999999999999998744 344445556653 321     12222   36899999999887


Q ss_pred             ccccccccccccCCCceEEEecCC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ......+..++  +++.++.+|..
T Consensus       263 vI~~~~~~~mK--~GailiN~G~~  284 (406)
T TIGR00936       263 VIRGEHFENMK--DGAIVANIGHF  284 (406)
T ss_pred             HHHHHHHhcCC--CCcEEEEECCC
Confidence            64433378888  89999888653

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.57  E-value=0.00038  Score=63.24  Aligned_cols=95  Identities=18%  Similarity=0.093  Sum_probs=57.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecC-chHHHHHh----cCCCeeeeCCChHHHHHHh-cCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSG-DAKDLVTS----LNPNLVIDYNEPEAMHSIA-GAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~-~~~~~~~~----lg~~~v~~~~~~~~~~~i~-~~~g~d~v~  258 (383)
                      +++++||..| +|+ |..++++++..|.  +|++++.+ +..+.+++    .+.+.+-.. ..++. .+. ..+.+|+|+
T Consensus        76 ~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~-~~d~~-~l~~~~~~fD~Vi  151 (272)
T PRK11873         76 KPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR-LGEIE-ALPVADNSVDVII  151 (272)
T ss_pred             CCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE-Ecchh-hCCCCCCceeEEE
Confidence            8999999999 666 8888888887765  79999854 44455443    444333111 11111 111 124699998


Q ss_pred             EcCC-----CCcccccccccccccCCCceEEEec
Q psy9949         259 DAAG-----IPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       259 d~~g-----~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ....     ........+.++|+  ++|+++..+
T Consensus       152 ~~~v~~~~~d~~~~l~~~~r~Lk--pGG~l~i~~  183 (272)
T PRK11873        152 SNCVINLSPDKERVFKEAFRVLK--PGGRFAISD  183 (272)
T ss_pred             EcCcccCCCCHHHHHHHHHHHcC--CCcEEEEEE
Confidence            6532     11111122278899  999998864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.56  E-value=0.00058  Score=59.35  Aligned_cols=78  Identities=23%  Similarity=0.426  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chH-HHHHhcCC----CeeeeCCChHH----HHHHh-cCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAK-DLVTSLNP----NLVIDYNEPEA----MHSIA-GAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~-~~~~~lg~----~~v~~~~~~~~----~~~i~-~~~g~d  255 (383)
                      -+++.++|+||++|+|.++++.+...|++|+.+.|. +++ +++.+++.    ...+|..+..-    .+.+. +.+.+|
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            356889999999999999999999999999999966 455 46677883    12356555422    22222 246799


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      +.++++|..
T Consensus        84 iLvNNAGl~   92 (246)
T COG4221          84 ILVNNAGLA   92 (246)
T ss_pred             EEEecCCCC
Confidence            999999964

>PLN02494 adenosylhomocysteinase

Probab=97.50  E-value=0.00069  Score=65.05  Aligned_cols=90  Identities=13%  Similarity=0.087  Sum_probs=67.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.|++|+|.| .|.+|..+++.++.+|++|+++..+. +...+...|+.. .     +..+.+   ...|++++++|...
T Consensus       252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v-----~leEal---~~ADVVI~tTGt~~  321 (477)
T PLN02494        252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV-L-----TLEDVV---SEADIFVTTTGNKD  321 (477)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCee-c-----cHHHHH---hhCCEEEECCCCcc
Confidence            4789999999 99999999999999999999987554 444555666642 2     122222   35899999999876


Q ss_pred             ccccccccccccCCCceEEEecC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ......++.++  +++.++.+|.
T Consensus       322 vI~~e~L~~MK--~GAiLiNvGr  342 (477)
T PLN02494        322 IIMVDHMRKMK--NNAIVCNIGH  342 (477)
T ss_pred             chHHHHHhcCC--CCCEEEEcCC
Confidence            53222388999  9999999875

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.46  E-value=0.00061  Score=68.58  Aligned_cols=77  Identities=22%  Similarity=0.339  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----------------------chHHHHHhcCCCeeeeCCC-hH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----------------------DAKDLVTSLNPNLVIDYNE-PE  243 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----------------------~~~~~~~~lg~~~v~~~~~-~~  243 (383)
                      +.|++|+|.| +|.+|+++++.++..|++|+++...                      .+.+.++++|++..++... .+
T Consensus       135 ~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~  213 (564)
T PRK12771        135 DTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED  213 (564)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence            6789999999 8999999999999999998888732                      1235667889876555332 22


Q ss_pred             H-HHHHhcCCCccEEEEcCCCCcc
Q psy9949         244 A-MHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       244 ~-~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      . .+.+  ..++|+||+++|....
T Consensus       214 ~~~~~~--~~~~D~Vi~AtG~~~~  235 (564)
T PRK12771        214 ITLEQL--EGEFDAVFVAIGAQLG  235 (564)
T ss_pred             CCHHHH--HhhCCEEEEeeCCCCC
Confidence            1 1122  1369999999998754

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.33  E-value=0.0043  Score=59.85  Aligned_cols=90  Identities=18%  Similarity=0.126  Sum_probs=65.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.|++|+|.| .|.+|..+++.++.+|++|+++.++. +...+...|+.. .     ++.+.+   ...|+|+.++|...
T Consensus       252 LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell---~~ADIVI~atGt~~  321 (476)
T PTZ00075        252 IAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-V-----TLEDVV---ETADIFVTATGNKD  321 (476)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHH---hcCCEEEECCCccc
Confidence            4789999999 89999999999999999998887543 332333456532 1     122222   36899999998876


Q ss_pred             ccccccccccccCCCceEEEecC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ......++.++  +++.++.+|.
T Consensus       322 iI~~e~~~~MK--pGAiLINvGr  342 (476)
T PTZ00075        322 IITLEHMRRMK--NNAIVGNIGH  342 (476)
T ss_pred             ccCHHHHhccC--CCcEEEEcCC
Confidence            54322388899  9999999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.31  E-value=0.0018  Score=52.06  Aligned_cols=90  Identities=22%  Similarity=0.294  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCC--eeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPN--LVIDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~--~v~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      ++.+++|.| +|++|.+++..+...|+ +|+.+.|+. +. ++++.++..  .++.+++  +.+.   ...+|+||.|++
T Consensus        11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~~~---~~~~DivI~aT~   84 (135)
T PF01488_consen   11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LEEA---LQEADIVINATP   84 (135)
T ss_dssp             TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HCHH---HHTESEEEE-SS
T ss_pred             CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HHHH---HhhCCeEEEecC
Confidence            688999999 79999999999999999 588888774 33 466667443  2344432  2222   236999999998


Q ss_pred             CCcccccccccccccCCC----ceEEEec
Q psy9949         263 IPLDQINSYLPFLKTGKF----SKFVTLR  287 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~----G~~v~~~  287 (383)
                      .......  -..+.  ..    +.+++++
T Consensus        85 ~~~~~i~--~~~~~--~~~~~~~~v~Dla  109 (135)
T PF01488_consen   85 SGMPIIT--EEMLK--KASKKLRLVIDLA  109 (135)
T ss_dssp             TTSTSST--HHHHT--TTCHHCSEEEES-
T ss_pred             CCCcccC--HHHHH--HHHhhhhceeccc
Confidence            8754333  33444  33    4667764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.14  E-value=0.0019  Score=57.66  Aligned_cols=78  Identities=27%  Similarity=0.484  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcC----CC-ee--eeCCChHHHHHHh----cC-C
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLN----PN-LV--IDYNEPEAMHSIA----GA-G  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg----~~-~v--~~~~~~~~~~~i~----~~-~  252 (383)
                      ..+.+++|+||++|+|...+..+...|.+++.++|++ +++ +++++.    .. .+  .|..+.+-.+.+.    .. .
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            5678999999999999999999999999999999775 443 334433    21 23  3555544444433    22 4


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      .+|+.++++|-.
T Consensus        84 ~IdvLVNNAG~g   95 (265)
T COG0300          84 PIDVLVNNAGFG   95 (265)
T ss_pred             cccEEEECCCcC
Confidence            799999999964

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.12  E-value=0.0011  Score=61.36  Aligned_cols=110  Identities=21%  Similarity=0.298  Sum_probs=75.8

Q ss_pred             cccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-
Q psy9949         148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-  224 (383)
Q Consensus       148 ~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-  224 (383)
                      +.++++|+.+..+.++... +...+++++...... ....++.+|+|.| +|.+|..+++.++..|+ +|+++.++. + 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~-~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKI-FGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHH-hCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            4678889999888887765 344566666532221 0002689999999 79999999999998886 777777664 3 


Q ss_pred             HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         225 KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       225 ~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .++++++|.. +.+.  .++.+.+   ..+|+||.|++.+..
T Consensus       216 ~~la~~~g~~-~~~~--~~~~~~l---~~aDvVi~at~~~~~  251 (311)
T cd05213         216 EELAKELGGN-AVPL--DELLELL---NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHHHcCCe-EEeH--HHHHHHH---hcCCEEEECCCCCch
Confidence            4677888874 3332  1233322   358999999998775

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.11  E-value=0.00018  Score=69.31  Aligned_cols=144  Identities=14%  Similarity=0.225  Sum_probs=93.0

Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEE--------------EeecCCCCCCceEEEeecCccccc---C-CCCCCHHHHH
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVY--------------GVIQPHKQGSFSKLILADSALVHK---K-PSNISDEEAA  163 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~--------------~~~~~~~~g~~a~~~~v~~~~~~~---i-p~~~~~~~aa  163 (383)
                      --|.|+++.+.+|++++++.-+|+.-+              +.++...++.|++++.++. .+..   + +..+|...+|
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A  167 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA  167 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence            458899999999999988766666543              1122233468888888875 3332   4 3344443333


Q ss_pred             hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCC
Q psy9949         164 GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYN  240 (383)
Q Consensus       164 ~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~  240 (383)
                      .-        .+.. ....    .++++|+|.| +|.+|..+++.++..|+ +|+++.++. + .++++++|.. .++. 
T Consensus       168 v~--------la~~-~~~~----l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~-  231 (417)
T TIGR01035       168 VE--------LAER-IFGS----LKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF-  231 (417)
T ss_pred             HH--------HHHH-HhCC----ccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-
Confidence            11        1112 2222    4778999999 79999999999999995 888888664 3 3467777764 3322 


Q ss_pred             ChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         241 EPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       241 ~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                       .+..+.+   .++|+||+|++.+..
T Consensus       232 -~~l~~~l---~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       232 -EDLEEYL---AEADIVISSTGAPHP  253 (417)
T ss_pred             -HHHHHHH---hhCCEEEECCCCCCc
Confidence             1222222   479999999987764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.07  E-value=0.0022  Score=66.11  Aligned_cols=112  Identities=23%  Similarity=0.212  Sum_probs=72.5

Q ss_pred             CCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEE
Q psy9949         137 GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV  216 (383)
Q Consensus       137 g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~V  216 (383)
                      -++++|..++...++.+ +..+.+++..            ......  ...++++++|+||+|++|..+++.+...|++|
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l------------~~~~~~--~~l~gk~vLVTGasggIG~~la~~L~~~Ga~V  449 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKL------------QRMPKP--KPLAGKVALVTGAAGGIGKATAKRLAAEGACV  449 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhh------------hcCCCC--cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEE
Confidence            46678888888777777 6666666641            111111  00367999999999999999999999999999


Q ss_pred             EEEecCc-hHH-HHHhcCC--C-e--eeeCCChHHHHHHh-----cCCCccEEEEcCCC
Q psy9949         217 VTTCSGD-AKD-LVTSLNP--N-L--VIDYNEPEAMHSIA-----GAGPYDVILDAAGI  263 (383)
Q Consensus       217 i~~~~~~-~~~-~~~~lg~--~-~--v~~~~~~~~~~~i~-----~~~g~d~v~d~~g~  263 (383)
                      ++++++. +.+ ....++.  . .  ..|..+.+-...+.     ..+++|++|+++|.
T Consensus       450 vl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~  508 (681)
T PRK08324        450 VLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI  508 (681)
T ss_pred             EEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            9999664 333 2333432  1 1  13444433222221     23689999999984

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.06  E-value=0.0034  Score=52.99  Aligned_cols=77  Identities=16%  Similarity=0.249  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcC--C-CeeeeCCChH----HHHHHhcC-CCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLN--P-NLVIDYNEPE----AMHSIAGA-GPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg--~-~~v~~~~~~~----~~~~i~~~-~g~d~v~  258 (383)
                      .|.+|||+||++|+|+.+++-...+|-+||...+++ +++.++..-  . ..+.|..+.+    +.+.+++. ...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            578999999999999999999999999999998775 455444322  1 2445655544    55555543 4689999


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      +++|-.
T Consensus        84 NNAGIq   89 (245)
T COG3967          84 NNAGIQ   89 (245)
T ss_pred             eccccc
Confidence            999863

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.97  E-value=0.0071  Score=57.37  Aligned_cols=95  Identities=20%  Similarity=0.219  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH-HhcCCCeeeeCCC-hHHHHHHhcCCCccEEEEcCCC-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV-TSLNPNLVIDYNE-PEAMHSIAGAGPYDVILDAAGI-  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~-~~lg~~~v~~~~~-~~~~~~i~~~~g~d~v~d~~g~-  263 (383)
                      ++.+|+|.| +|.+|+.+++.++.+|++|++++++ ++.+.+ ..++......+.+ ..+.+.+   ..+|++|++++. 
T Consensus       166 ~~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l---~~aDvVI~a~~~~  241 (370)
T TIGR00518       166 EPGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV---KRADLLIGAVLIP  241 (370)
T ss_pred             CCceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH---ccCCEEEEccccC
Confidence            345699999 7999999999999999998888855 344444 4455432222222 2223222   479999999843 


Q ss_pred             ----CcccccccccccccCCCceEEEecC
Q psy9949         264 ----PLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       264 ----~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                          +.......++.++  +++.+++++.
T Consensus       242 g~~~p~lit~~~l~~mk--~g~vIvDva~  268 (370)
T TIGR00518       242 GAKAPKLVSNSLVAQMK--PGAVIVDVAI  268 (370)
T ss_pred             CCCCCcCcCHHHHhcCC--CCCEEEEEec
Confidence                2111121266778  8999998853

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0049  Score=56.03  Aligned_cols=76  Identities=21%  Similarity=0.461  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHH----Hhc-C-CCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHS----IAG-A-GPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~----i~~-~-~g~d~v~d  259 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. ..+.+.+.+...+ .|..+....+.    +.+ . +.+|++|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            467899999999999999999888999999999664 3444444454433 45555432222    211 2 46999999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      ++|.
T Consensus        83 ~Ag~   86 (277)
T PRK05993         83 NGAY   86 (277)
T ss_pred             CCCc
Confidence            9874

>PRK12742 oxidoreductase; Provisional

Probab=96.95  E-value=0.0064  Score=53.68  Aligned_cols=77  Identities=29%  Similarity=0.437  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-HHHHhcCCCee-eeCCChH-HHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-DLVTSLNPNLV-IDYNEPE-AMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~~~~~lg~~~v-~~~~~~~-~~~~i~~~~g~d~v~d~~g  262 (383)
                      ++++++|+||+|++|..+++.+...|++|+.+.+..  +. ++..+++...+ .|..+.. +.+.+.+.+++|++|+++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            578999999999999999999999999988876432  22 33345554432 3443432 3333334467999999988


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        85 ~~   86 (237)
T PRK12742         85 IA   86 (237)
T ss_pred             CC
Confidence            63

>PRK06182 short chain dehydrogenase; Validated

Probab=96.87  E-value=0.0077  Score=54.56  Aligned_cols=77  Identities=25%  Similarity=0.354  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHh-----cCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIA-----GAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~-----~~~g~d~v~d~  260 (383)
                      ++++++|+|++|++|..+++.+...|++|++++++. +.+.+...+...+ .|..+.+..+.+.     ..+++|++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            357899999999999999999888999999998664 3333333343322 4555543332222     23589999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus        82 ag~~   85 (273)
T PRK06182         82 AGYG   85 (273)
T ss_pred             CCcC
Confidence            9853

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0072  Score=53.94  Aligned_cols=73  Identities=22%  Similarity=0.348  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. + .+.... +....  .|..+.+-..  ...+++|++|+++|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~--~~~~~iDilVnnAG~   89 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLD--KQLASLDVLILNHGI   89 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHH--HhcCCCCEEEECCcc
Confidence            468999999999999999999989999999988654 2 111111 11122  3444332221  123579999999985

>KOG1205|consensus

Probab=96.84  E-value=0.0063  Score=54.77  Aligned_cols=77  Identities=27%  Similarity=0.368  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHH----HHHhcCCCe-e----eeCCChHHHH----H-HhcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKD----LVTSLNPNL-V----IDYNEPEAMH----S-IAGAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~----~~~~lg~~~-v----~~~~~~~~~~----~-i~~~~  252 (383)
                      .+++|+|+||++|+|.+++.-....|++++.+++ .++++    .+++.+... +    .|-.+.+..+    + +...+
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            6889999999999999988888888998888884 44444    334444332 3    2444433222    2 23468


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|+.++++|-.
T Consensus        91 ~vDvLVNNAG~~  102 (282)
T KOG1205|consen   91 RVDVLVNNAGIS  102 (282)
T ss_pred             CCCEEEecCccc
Confidence            999999999863

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.0064  Score=55.13  Aligned_cols=74  Identities=27%  Similarity=0.392  Sum_probs=51.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHH----h-cCCCccEEEEcCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSI----A-GAGPYDVILDAAG  262 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i----~-~~~g~d~v~d~~g  262 (383)
                      ++++|+||+|++|..+++.+...|++|++++++. +.+.+.+.+...+ .|..+.....++    . ..+++|++|+++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            4799999999999999999988999999998664 3343344444333 465553333222    2 2357999999998


Q ss_pred             C
Q psy9949         263 I  263 (383)
Q Consensus       263 ~  263 (383)
                      .
T Consensus        82 ~   82 (274)
T PRK05693         82 Y   82 (274)
T ss_pred             C
Confidence            4

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0095  Score=55.70  Aligned_cols=76  Identities=21%  Similarity=0.412  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCe-e--eeCCChHHHHHHh----c-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNL-V--IDYNEPEAMHSIA----G-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~-v--~~~~~~~~~~~i~----~-~~g~  254 (383)
                      .+++++|+||+|++|.++++.+...|++|+++++++ +.+    .+++.|.+. +  .|..+.+-.+.+.    + .+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            568999999999999999999999999999998764 322    223445432 1  3555543333322    2 2679


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999985

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=96.76  E-value=0.0045  Score=52.87  Aligned_cols=98  Identities=23%  Similarity=0.194  Sum_probs=70.2

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-----HHHHhcCCCeeeeCCChHHHHHHhcCCC
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-----DLVTSLNPNLVIDYNEPEAMHSIAGAGP  253 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-----~~~~~lg~~~v~~~~~~~~~~~i~~~~g  253 (383)
                      ...+    +++++||=.|  .|.|+.++-+|+..| +|+.+.+.+++     ..++.+|..+|.....+ -.....+.+.
T Consensus        67 ~L~~----~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD-G~~G~~~~aP  138 (209)
T COG2518          67 LLEL----KPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGD-GSKGWPEEAP  138 (209)
T ss_pred             HhCC----CCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC-cccCCCCCCC
Confidence            5566    8999999998  567999999999888 99999877653     34567888655322211 1112223357


Q ss_pred             ccEEEEcCCCCcccccccccccccCCCceEEEec
Q psy9949         254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ||.|+-+.+.+..... +++.|+  ++|++|...
T Consensus       139 yD~I~Vtaaa~~vP~~-Ll~QL~--~gGrlv~Pv  169 (209)
T COG2518         139 YDRIIVTAAAPEVPEA-LLDQLK--PGGRLVIPV  169 (209)
T ss_pred             cCEEEEeeccCCCCHH-HHHhcc--cCCEEEEEE
Confidence            9999988888776554 388999  999998763

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.013  Score=52.56  Aligned_cols=76  Identities=20%  Similarity=0.315  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCCee-eeCCChHHHHHHhc-----CCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPNLV-IDYNEPEAMHSIAG-----AGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~~v-~~~~~~~~~~~i~~-----~~g~d~v~d  259 (383)
                      ++++|+|+||+|++|..+++.+...|++|+++++++. .+ ...+++...+ .|..+.+..+++.+     .+++|++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999999999999999986643 22 3344543322 35555433322221     257999999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9875

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.69  E-value=0.012  Score=51.97  Aligned_cols=76  Identities=16%  Similarity=0.232  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH-Hh---cCCCeee--eCCChHHHHHH----hc-CCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV-TS---LNPNLVI--DYNEPEAMHSI----AG-AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~-~~---lg~~~v~--~~~~~~~~~~i----~~-~~g~d  255 (383)
                      .+++|+|+|++|++|..+++.+...|++|+.+++++. .+.+ .+   .+....+  |..+.+-.+.+    .. .+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999997643 2222 22   2222222  33333322222    11 25689


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      .++.++|.
T Consensus        84 ~ii~~ag~   91 (238)
T PRK05786         84 GLVVTVGG   91 (238)
T ss_pred             EEEEcCCC
Confidence            99999875

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.013  Score=51.95  Aligned_cols=76  Identities=29%  Similarity=0.426  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee-eeCCChHHHHHHh-cCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV-IDYNEPEAMHSIA-GAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v-~~~~~~~~~~~i~-~~~g~d~v~d~~g~  263 (383)
                      .+++++|+|++|++|..+++.+...|++|++++++. +. ++....+...+ .|..+.+....+. ..+++|++|.++|.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~   87 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI   87 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            568999999999999999999999999999988664 33 33344454322 3555443333332 33579999999985

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.67  E-value=0.021  Score=52.20  Aligned_cols=90  Identities=16%  Similarity=0.201  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .+++++|.| .|.+|.+++..++.+|++|++..++. +.+.+.++|... +.+  .++.+.   ..++|+||+++.....
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-~~~--~~l~~~---l~~aDiVint~P~~ii  222 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-FPL--NKLEEK---VAEIDIVINTIPALVL  222 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-ecH--HHHHHH---hccCCEEEECCChHHh
Confidence            578999999 89999999999999999999888764 334445566432 211  122222   2479999999876543


Q ss_pred             cccccccccccCCCceEEEec
Q psy9949         267 QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ... .++.++  ++..+++++
T Consensus       223 ~~~-~l~~~k--~~aliIDla  240 (287)
T TIGR02853       223 TAD-VLSKLP--KHAVIIDLA  240 (287)
T ss_pred             CHH-HHhcCC--CCeEEEEeC
Confidence            222 266777  887888874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=96.65  E-value=0.008  Score=53.82  Aligned_cols=139  Identities=17%  Similarity=0.068  Sum_probs=82.3

Q ss_pred             CCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCC
Q psy9949         119 TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGAS  198 (383)
Q Consensus       119 ~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~  198 (383)
                      +.+++||+++...      +|.+|.. +...++++++++++..+.--... . ....+..  .+    .++++||-.| +
T Consensus        65 ~p~~~g~~~~i~p------~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~-~l~~l~~--~~----~~~~~VLDiG-c  128 (250)
T PRK00517         65 HPIRIGDRLWIVP------SWEDPPD-PDEINIELDPGMAFGTGTHPTTR-L-CLEALEK--LV----LPGKTVLDVG-C  128 (250)
T ss_pred             CCEEEcCCEEEEC------CCcCCCC-CCeEEEEECCCCccCCCCCHHHH-H-HHHHHHh--hc----CCCCEEEEeC-C
Confidence            3467888877663      4666644 77788999998887765522211 1 2223321  23    6889999999 6


Q ss_pred             chHHHHHHHHHHHCCC-EEEEEecCc-hHHHHHh----cCC-CeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc--ccc
Q psy9949         199 GGVGTMAVQLLKAWDI-EVVTTCSGD-AKDLVTS----LNP-NLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD--QIN  269 (383)
Q Consensus       199 g~vG~~ai~la~~~G~-~Vi~~~~~~-~~~~~~~----lg~-~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~--~~~  269 (383)
                      |. |.+++.+++ .|+ +|++++.++ ..+.+++    .+. +.+.-...         ...+|+|+.+......  ...
T Consensus       129 Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~---------~~~fD~Vvani~~~~~~~l~~  197 (250)
T PRK00517        129 GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG---------DLKADVIVANILANPLLELAP  197 (250)
T ss_pred             cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC---------CCCcCEEEEcCcHHHHHHHHH
Confidence            65 888776655 566 699998543 3444332    232 11110100         0158999876554322  111


Q ss_pred             ccccccccCCCceEEEe
Q psy9949         270 SYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       270 ~~~~~l~~~~~G~~v~~  286 (383)
                      .+.++++  ++|+++..
T Consensus       198 ~~~~~Lk--pgG~lils  212 (250)
T PRK00517        198 DLARLLK--PGGRLILS  212 (250)
T ss_pred             HHHHhcC--CCcEEEEE
Confidence            1267789  99999986

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.012  Score=54.19  Aligned_cols=76  Identities=28%  Similarity=0.352  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC--Ce-e--eeCCChHHH----HHHhc-CCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP--NL-V--IDYNEPEAM----HSIAG-AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~--~~-v--~~~~~~~~~----~~i~~-~~g~d  255 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++.. . +..++++.  .. .  .|..+.+-.    +++.+ .+++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999986643 3 34444542  11 1  344443222    22222 36799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|+++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999986

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.59  E-value=0.0065  Score=58.82  Aligned_cols=150  Identities=15%  Similarity=0.246  Sum_probs=91.0

Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEE-E-------------eecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhh
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVY-G-------------VIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVL  166 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~-~-------------~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~  166 (383)
                      .--|||+++.+.+|+++.++.-+|+.-+ +             .++...++.|++.        +++|+.+..+.+..- 
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~i~~-  160 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETGIGA-  160 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcCCCC-
Confidence            3459999999999999988755665532 1             1111112333332        444554443333222 


Q ss_pred             HHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChH
Q psy9949         167 YTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPE  243 (383)
Q Consensus       167 ~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~  243 (383)
                      .+...+++++...... ....++++|+|.| +|.+|.++++.++..|+ +|+++.++. + .+++.++|.+ +++.  .+
T Consensus       161 ~~~Sv~~~Av~~a~~~-~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~  235 (423)
T PRK00045        161 GAVSVASAAVELAKQI-FGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--DE  235 (423)
T ss_pred             CCcCHHHHHHHHHHHh-hCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HH
Confidence            1334456666432221 0003678999999 89999999999999998 788777653 4 3477778764 3332  12


Q ss_pred             HHHHHhcCCCccEEEEcCCCCccc
Q psy9949         244 AMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       244 ~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      ..+.   ..++|+||+|+|.+...
T Consensus       236 ~~~~---l~~aDvVI~aT~s~~~~  256 (423)
T PRK00045        236 LPEA---LAEADIVISSTGAPHPI  256 (423)
T ss_pred             HHHH---hccCCEEEECCCCCCcE
Confidence            2222   24799999999987643

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.57  E-value=0.013  Score=49.57  Aligned_cols=93  Identities=24%  Similarity=0.317  Sum_probs=57.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCCccc--
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ--  267 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~--  267 (383)
                      |+|+||+|.+|..+++.+...|.+|+++++++. .+.  ..+.+.+ .|..+.+....  ...++|.||.+.|.....  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~--al~~~d~vi~~~~~~~~~~~   76 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKA--ALKGADAVIHAAGPPPKDVD   76 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHH--HHTTSSEEEECCHSTTTHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhh--hhhhcchhhhhhhhhccccc
Confidence            789999999999999999999999999997754 333  3333322 24444322222  235899999999853321  


Q ss_pred             -ccccccccccCCCceEEEecC
Q psy9949         268 -INSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       268 -~~~~~~~l~~~~~G~~v~~~~  288 (383)
                       ...+++.++...-.+++.+++
T Consensus        77 ~~~~~~~a~~~~~~~~~v~~s~   98 (183)
T PF13460_consen   77 AAKNIIEAAKKAGVKRVVYLSS   98 (183)
T ss_dssp             HHHHHHHHHHHTTSSEEEEEEE
T ss_pred             ccccccccccccccccceeeec
Confidence             111134443112337777654

...

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.019  Score=52.73  Aligned_cols=77  Identities=23%  Similarity=0.438  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHHHHhc-----CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMHSIAG-----AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~~i~~-----~~g~  254 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +.+ ...   +.+.+ .+  .|..+.+....+.+     .+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999998888899999999764 222 222   22322 12  34444333322222     3579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus       119 d~li~~AG~~  128 (293)
T PRK05866        119 DILINNAGRS  128 (293)
T ss_pred             CEEEECCCCC
Confidence            9999999854

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.43  E-value=0.014  Score=57.92  Aligned_cols=76  Identities=22%  Similarity=0.331  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh--------cCC-----Cee--eeCCChHHHHHHh
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS--------LNP-----NLV--IDYNEPEAMHSIA  249 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~--------lg~-----~~v--~~~~~~~~~~~i~  249 (383)
                      +.+++|+|+||+|++|..+++.+...|++|++++++.. .+ ++..        .|.     ..+  .|..+.+...  .
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~--~  155 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG--P  155 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH--H
Confidence            68899999999999999999999889999999987643 22 2221        121     112  3444322211  1


Q ss_pred             cCCCccEEEEcCCCC
Q psy9949         250 GAGPYDVILDAAGIP  264 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~  264 (383)
                      ..+++|+||.++|..
T Consensus       156 aLggiDiVVn~AG~~  170 (576)
T PLN03209        156 ALGNASVVICCIGAS  170 (576)
T ss_pred             HhcCCCEEEEccccc
Confidence            236899999999864

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.02  Score=51.78  Aligned_cols=76  Identities=24%  Similarity=0.421  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcC-CCe-eeeCCChHHH----HHHhc-CCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLN-PNL-VIDYNEPEAM----HSIAG-AGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg-~~~-v~~~~~~~~~----~~i~~-~~g~d~v~  258 (383)
                      .+.+++|+||+|++|..+++.+...|++|+++.+++ +. +...+++ ... ..|..+.+-.    +.+.+ .+++|+++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467999999999999999988888899999888654 32 2334444 221 1354443322    22222 36799999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      .++|.
T Consensus        84 ~~ag~   88 (273)
T PRK07825         84 NNAGV   88 (273)
T ss_pred             ECCCc
Confidence            99985

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.024  Score=49.94  Aligned_cols=76  Identities=25%  Similarity=0.371  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH--HHHH---hcCCCee-eeCCChHHHH----HHhc-CCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--DLVT---SLNPNLV-IDYNEPEAMH----SIAG-AGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~--~~~~---~lg~~~v-~~~~~~~~~~----~i~~-~~g~d~  256 (383)
                      +++++||+|++|++|..+++.+...|++|++++++...  +...   ..+...+ .|..+....+    .+.+ .+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            47899999999999999999988889999999975422  2222   2233221 3444322222    2222 357999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|.++|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9999875

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.029  Score=50.36  Aligned_cols=78  Identities=24%  Similarity=0.346  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCC--e--eeeCCChHHHHHH----h-cCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPN--L--VIDYNEPEAMHSI----A-GAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~--~--v~~~~~~~~~~~i----~-~~~g~d  255 (383)
                      -++.++||+||+|++|..++..+...|++|+++.++++ .+ ........  .  ..|..+......+    . ..+++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999999999999999999987643 22 22222211  1  1344443322222    1 136899


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      +||.++|..
T Consensus        89 ~vi~~ag~~   97 (264)
T PRK12829         89 VLVNNAGIA   97 (264)
T ss_pred             EEEECCCCC
Confidence            999999865

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.025  Score=50.81  Aligned_cols=77  Identities=23%  Similarity=0.309  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEecCc-hHHH----HHh-cCCCee----eeCCChHHHHHHh-----c
Q psy9949         187 PRDKRVLVLGASG-GVGTMAVQLLKAWDIEVVTTCSGD-AKDL----VTS-LNPNLV----IDYNEPEAMHSIA-----G  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g-~vG~~ai~la~~~G~~Vi~~~~~~-~~~~----~~~-lg~~~v----~~~~~~~~~~~i~-----~  250 (383)
                      .++++++|+||+| ++|.++++.+...|++|+++++++ +.+.    +++ ++...+    .|..+.+-.+.+.     .
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999886 899999999999999999888654 2221    112 443322    2444433222222     2


Q ss_pred             CCCccEEEEcCCC
Q psy9949         251 AGPYDVILDAAGI  263 (383)
Q Consensus       251 ~~g~d~v~d~~g~  263 (383)
                      .+++|++|.++|.
T Consensus        95 ~g~id~li~~ag~  107 (262)
T PRK07831         95 LGRLDVLVNNAGL  107 (262)
T ss_pred             cCCCCEEEECCCC
Confidence            3579999999985

>KOG1199|consensus

Probab=96.32  E-value=0.017  Score=47.32  Aligned_cols=80  Identities=20%  Similarity=0.320  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe--cCchHHHHHhcCCCeeeeCCC----hHHHHHHh----cCCCccE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC--SGDAKDLVTSLNPNLVIDYNE----PEAMHSIA----GAGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~--~~~~~~~~~~lg~~~v~~~~~----~~~~~~i~----~~~g~d~  256 (383)
                      .++-.-+|+|+++++|.+++.-+...|+.|+..+  .+...+.++++|..-++.+.+    ++....+.    +.+..|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            4667789999999999999999999999999888  334567889999876765444    22222222    2357899


Q ss_pred             EEEcCCCCcc
Q psy9949         257 ILDAAGIPLD  266 (383)
Q Consensus       257 v~d~~g~~~~  266 (383)
                      .++|+|....
T Consensus        87 ~vncagia~a   96 (260)
T KOG1199|consen   87 LVNCAGIAYA   96 (260)
T ss_pred             eeeccceeee
Confidence            9999998543

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.029  Score=50.29  Aligned_cols=78  Identities=21%  Similarity=0.287  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch--HH-HH---HhcCCC--ee--eeCCChHH----HHHHhcC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA--KD-LV---TSLNPN--LV--IDYNEPEA----MHSIAGA  251 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~--~~-~~---~~lg~~--~v--~~~~~~~~----~~~i~~~  251 (383)
                      ..+++|+|+||+|++|..+++-+... |++|+++++++.  .+ ..   ++.+..  .+  .|..+.+.    .+.+.+.
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            56789999999999999998876666 489999986532  22 22   233321  22  34444332    2333333


Q ss_pred             CCccEEEEcCCCC
Q psy9949         252 GPYDVILDAAGIP  264 (383)
Q Consensus       252 ~g~d~v~d~~g~~  264 (383)
                      +++|+++.++|..
T Consensus        86 g~id~li~~ag~~   98 (253)
T PRK07904         86 GDVDVAIVAFGLL   98 (253)
T ss_pred             CCCCEEEEeeecC
Confidence            5799999888763

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.019  Score=51.80  Aligned_cols=76  Identities=26%  Similarity=0.375  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHHHHh-----cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMHSIA-----GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~i~-----~~~g~d~v~d~~  261 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++..... ...+... ..|..+.+-.+++.     ..+.+|++|.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a   81 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA   81 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence            4578999999999999999988888999999987642211 1112222 23554433222222     235799999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        82 g~~   84 (270)
T PRK06179         82 GVG   84 (270)
T ss_pred             CCC
Confidence            863

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.30  E-value=0.081  Score=43.46  Aligned_cols=102  Identities=17%  Similarity=0.092  Sum_probs=58.7

Q ss_pred             HHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949         172 AWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       172 A~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~i~~  250 (383)
                      .+.++.+..++.   -.|++++|.| -|-+|..+++.++.+|++|+++..+.- .-.+.--|.. +.     .+.+.   
T Consensus         9 ~~d~i~r~t~~~---l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~-----~~~~a---   75 (162)
T PF00670_consen    9 LVDGIMRATNLM---LAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VM-----TLEEA---   75 (162)
T ss_dssp             HHHHHHHHH-S-----TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE------HHHH---
T ss_pred             HHHHHHhcCcee---eCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ec-----CHHHH---
Confidence            334444444441   4789999999 999999999999999999999985543 2223333432 32     12222   


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ....|++|-++|.........++.|+  ++..+..++.
T Consensus        76 ~~~adi~vtaTG~~~vi~~e~~~~mk--dgail~n~Gh  111 (162)
T PF00670_consen   76 LRDADIFVTATGNKDVITGEHFRQMK--DGAILANAGH  111 (162)
T ss_dssp             TTT-SEEEE-SSSSSSB-HHHHHHS---TTEEEEESSS
T ss_pred             HhhCCEEEECCCCccccCHHHHHHhc--CCeEEeccCc
Confidence            23689999999987753333367777  6656655543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.30  E-value=0.052  Score=46.52  Aligned_cols=75  Identities=23%  Similarity=0.283  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhc----CCCe-eeeCCC-hHHHHHHhcCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSL----NPNL-VIDYNE-PEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~l----g~~~-v~~~~~-~~~~~~i~~~~g~d~v~d  259 (383)
                      ++.+++|.|++|++|..++..+...|++|+.+.++. +. ++...+    +... ..+..+ .+..+.   ..++|+||.
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~diVi~  103 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAA---IKGADVVFA  103 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHH---HhcCCEEEE
Confidence            678999999899999998888888889999888653 22 233333    2221 122222 222222   247899999


Q ss_pred             cCCCCc
Q psy9949         260 AAGIPL  265 (383)
Q Consensus       260 ~~g~~~  265 (383)
                      +++...
T Consensus       104 at~~g~  109 (194)
T cd01078         104 AGAAGV  109 (194)
T ss_pred             CCCCCc
Confidence            887655

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08017 oxidoreductase; Provisional

Probab=96.29  E-value=0.025  Score=50.46  Aligned_cols=74  Identities=26%  Similarity=0.409  Sum_probs=51.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHH----HHHHhc--CCCccEEEEcC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEA----MHSIAG--AGPYDVILDAA  261 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~----~~~i~~--~~g~d~v~d~~  261 (383)
                      ++++|+|++|++|..+++.+...|++|++++++. +.+.+.+.+...+ .|..+.+.    .+.+..  .+.+|.++.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            5799999999999999999999999999988654 4455555665433 35544322    222222  14689999988


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        83 g~   84 (256)
T PRK08017         83 GF   84 (256)
T ss_pred             CC
Confidence            74

>PRK06196 oxidoreductase; Provisional

Probab=96.28  E-value=0.024  Score=52.57  Aligned_cols=76  Identities=17%  Similarity=0.333  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCee--eeCCChHHH----HHHhc-CCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g~d~v~  258 (383)
                      .+++++|+||+|++|..++..+...|++|++++++.+ . +.+.++.....  .|..+..-.    +.+.+ .+++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            5689999999999999999988889999999987643 2 23333321122  344443322    22222 35799999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      .++|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            99984

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.25  E-value=0.099  Score=43.58  Aligned_cols=77  Identities=19%  Similarity=0.193  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGG-VGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~-vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.+.+|+|.| +|. +|..++..++..|++|+.+.+..                  .++.+.   ...+|+||.+++.+.
T Consensus        42 l~gk~vlViG-~G~~~G~~~a~~L~~~g~~V~v~~r~~------------------~~l~~~---l~~aDiVIsat~~~~   99 (168)
T cd01080          42 LAGKKVVVVG-RSNIVGKPLAALLLNRNATVTVCHSKT------------------KNLKEH---TKQADIVIVAVGKPG   99 (168)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHhhCCCEEEEEECCc------------------hhHHHH---HhhCCEEEEcCCCCc
Confidence            4789999999 565 69989999999999877776541                  112222   235899999999987


Q ss_pred             ccccccccccccCCCceEEEecCCC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      . ..  .+.++  ++-.+++++.+.
T Consensus       100 i-i~--~~~~~--~~~viIDla~pr  119 (168)
T cd01080         100 L-VK--GDMVK--PGAVVIDVGINR  119 (168)
T ss_pred             e-ec--HHHcc--CCeEEEEccCCC
Confidence            3 33  44566  666777776543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.25  E-value=0.028  Score=50.53  Aligned_cols=76  Identities=21%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCC-ee--eeCCChHHHH----HHh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPN-LV--IDYNEPEAMH----SIA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~-~v--~~~~~~~~~~----~i~-~~~g~d~v  257 (383)
                      ++++++|+||++++|..+++.+...|++|+.+++++ +.+ ...+++.. ..  .|..+....+    .+. ..+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            578999999999999999999999999999998664 333 33344421 12  2444432222    222 23579999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            999984

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.033  Score=52.15  Aligned_cols=76  Identities=25%  Similarity=0.405  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCee---eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNLV---IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~v---~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++++ .+ .   +++.|....   .|..+..-.+.+.     ..+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            5679999999999999999999989999999987642 22 2   233454321   3554543333222     23679


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999985

>KOG1200|consensus

Probab=96.22  E-value=0.036  Score=46.51  Aligned_cols=77  Identities=23%  Similarity=0.256  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hHHHHHhcCC--Cee---eeCCChH-----HHHHHhcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AKDLVTSLNP--NLV---IDYNEPE-----AMHSIAGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~~~~~~lg~--~~v---~~~~~~~-----~~~~i~~~~g~d  255 (383)
                      ..+.++|+||++++|.+..+.+...|++|.+.+.+ . .++.++.++.  ++.   .|..+..     +.+..+..+.++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            45678999999999999999999999999999843 3 3456677765  332   2333222     233333457899


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      ++++|+|..
T Consensus        93 vlVncAGIt  101 (256)
T KOG1200|consen   93 VLVNCAGIT  101 (256)
T ss_pred             EEEEcCccc
Confidence            999999974

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.21  E-value=0.032  Score=49.26  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhcCCCee-eeCCChH----HHHHHhc-CCCccEEEEc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSLNPNLV-IDYNEPE----AMHSIAG-AGPYDVILDA  260 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~lg~~~v-~~~~~~~----~~~~i~~-~~g~d~v~d~  260 (383)
                      +++++|+||+|++|..+++.+...|++|++++++..  .+.+++.+...+ .|..+.+    +.+.+.+ .+++|+++.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            468999999999999999988889999999986542  233344453222 3433322    2222222 3569999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            885

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.20  E-value=0.036  Score=49.23  Aligned_cols=76  Identities=24%  Similarity=0.310  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHH----HHHhc-CCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAM----HSIAG-AGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~----~~i~~-~~g~d~v  257 (383)
                      ++++++|+||+|++|..+++.+...|++|+++++++. . +..++++... .  .|..+..-.    +.+.+ .+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5679999999999999999999999999999987643 2 3334555431 1  233332222    22222 3579999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999885

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.20  E-value=0.025  Score=50.55  Aligned_cols=76  Identities=22%  Similarity=0.341  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCCe-e--eeCCChHHHHHHh-----cCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPNL-V--IDYNEPEAMHSIA-----GAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~d~  256 (383)
                      .+++++|+||++++|.++++.+...|++|+++.+++..   +..++.+... .  .|..+.+-.+.+.     ..+++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999998999999988754322   2333444321 1  3544433232222     2367999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      ++.++|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9999885

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.028  Score=51.02  Aligned_cols=77  Identities=27%  Similarity=0.358  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHh-cCCC-ee--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTS-LNPN-LV--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~-lg~~-~v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +.+.+.+ .+.. ..  .|..+.+....+.     ..+++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            457899999999999999999888899999999754 3333222 2221 11  3444433222221     13579999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.++|..
T Consensus        83 v~~ag~~   89 (277)
T PRK06180         83 VNNAGYG   89 (277)
T ss_pred             EECCCcc
Confidence            9999863

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.16  E-value=0.032  Score=50.16  Aligned_cols=76  Identities=20%  Similarity=0.231  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH-HhcCCC-ee--eeCCChHHH-H---HHh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV-TSLNPN-LV--IDYNEPEAM-H---SIA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~-~~lg~~-~v--~~~~~~~~~-~---~i~-~~~g~d~v  257 (383)
                      ++++++|+||+|++|..+++.+...|++|+++.++. +.+.+ ...+.. ..  .|..+.+-. +   ++. ..+.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999999988999999988654 33322 223321 11  244443222 1   222 23679999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        84 i~~Ag~   89 (262)
T TIGR03325        84 IPNAGI   89 (262)
T ss_pred             EECCCC
Confidence            999874

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.14  E-value=0.041  Score=48.92  Aligned_cols=76  Identities=17%  Similarity=0.314  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCe-e--eeCCChHHHHHH----hc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNL-V--IDYNEPEAMHSI----AG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~-v--~~~~~~~~~~~i----~~-~~g~  254 (383)
                      ++++++|+|++|++|..+++.+...|++|+.++++.. .+ .   .+..+... .  .|..+....+.+    .+ .+++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999989999999886642 22 2   22334331 1  333332222222    11 2568


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999884

>KOG1201|consensus

Probab=96.14  E-value=0.034  Score=49.98  Aligned_cols=78  Identities=15%  Similarity=0.276  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hH---HHHHhcCC--CeeeeCCCh----HHHHHHhc-CCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AK---DLVTSLNP--NLVIDYNEP----EAMHSIAG-AGPY  254 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~---~~~~~lg~--~~v~~~~~~----~~~~~i~~-~~g~  254 (383)
                      -.|+.|||+||++|+|.+.++=...+|++++..+-+ + ..   +..++.|-  .++.|-.+.    ...+++++ .+.+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            368999999999999998877777789977777733 2 23   34444452  133444442    23344443 4789


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++++++|.-
T Consensus       116 ~ILVNNAGI~  125 (300)
T KOG1201|consen  116 DILVNNAGIV  125 (300)
T ss_pred             eEEEeccccc
Confidence            9999999974

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.035  Score=48.66  Aligned_cols=74  Identities=26%  Similarity=0.452  Sum_probs=49.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee--eeCCChHHHHHHhc---CCCccEEEEcCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV--IDYNEPEAMHSIAG---AGPYDVILDAAGI  263 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v--~~~~~~~~~~~i~~---~~g~d~v~d~~g~  263 (383)
                      ++++|+|++|++|..++..+...|++|++++++. +.+.+++++...+  .|..+.+....+.+   .+++|++|.++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            4799999999999999888888899999999654 3333333332222  34444332323222   2479999999875

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.13  E-value=0.038  Score=46.69  Aligned_cols=87  Identities=18%  Similarity=0.221  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHH-HHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDL-VTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-  265 (383)
                      .+++|.|+| .|.+|..+++.++.+|++|++.++..+... ....+..    +.  ++.+-+.   ..|+|+.+..... 
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~--~l~ell~---~aDiv~~~~plt~~  104 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YV--SLDELLA---QADIVSLHLPLTPE  104 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ES--SHHHHHH---H-SEEEE-SSSSTT
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----ee--ehhhhcc---hhhhhhhhhccccc
Confidence            589999999 999999999999999999999997765443 4455531    11  1232222   4899988776322 


Q ss_pred             ---ccccccccccccCCCceEEEe
Q psy9949         266 ---DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       266 ---~~~~~~~~~l~~~~~G~~v~~  286 (383)
                         ......++.++  ++..+|.+
T Consensus       105 T~~li~~~~l~~mk--~ga~lvN~  126 (178)
T PF02826_consen  105 TRGLINAEFLAKMK--PGAVLVNV  126 (178)
T ss_dssp             TTTSBSHHHHHTST--TTEEEEES
T ss_pred             cceeeeeeeeeccc--cceEEEec
Confidence               11222267778  88888876

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.04  Score=49.51  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHH----HHh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMH----SIA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~----~i~-~~~g~d~v  257 (383)
                      .+++++|+||+|++|..++..+...|++|++++++.+ . +..++++.. ..  .|..+.+-..    .+. ..+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5689999999999999999999889999999986643 3 344455432 11  3444432222    222 23579999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            999885

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.026  Score=50.89  Aligned_cols=76  Identities=22%  Similarity=0.312  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH-h----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI-A----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i-~----~~~g~  254 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++.+ . +.   ..+.+.. ..  .|..+.+-..+. .    ..+++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6789999999999999999999899999999986542 2 22   2222322 11  344443322222 1    23579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        88 D~vi~~ag~   96 (264)
T PRK07576         88 DVLVSGAAG   96 (264)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.041  Score=49.61  Aligned_cols=76  Identities=16%  Similarity=0.229  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhc----CCC-ee--eeCCChH----HHHHHhcCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSL----NPN-LV--IDYNEPE----AMHSIAGAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~l----g~~-~v--~~~~~~~----~~~~i~~~~g~  254 (383)
                      .+++++|+||++++|.++++.+...|++|++++++. +.+ ...++    +.. ..  .|..+.+    +.+.+.+.+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            578999999999999999999999999999988653 322 22221    322 11  3444432    22233334679


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |+++.++|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999999985

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.12  E-value=0.036  Score=50.26  Aligned_cols=76  Identities=25%  Similarity=0.388  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCch-H----HHHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDA-K----DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~-~----~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g  253 (383)
                      +++++||+||++  ++|.++++.+...|++|+.+.++++ .    ++.+++|....  .|..+.+-.    +.+.+ .+.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            578999999886  9999999999889999998876532 1    22234453322  344443322    22222 367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++++++|.
T Consensus        86 iD~lVnnAG~   95 (271)
T PRK06505         86 LDFVVHAIGF   95 (271)
T ss_pred             CCEEEECCcc
Confidence            9999999985

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.03  Score=50.36  Aligned_cols=76  Identities=22%  Similarity=0.370  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++.+ .+ +..   +.+.. .+  .|..+.....++.     ..+++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999889999999987542 22 222   22322 22  3555544332222     23579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        89 d~vi~~Ag~   97 (263)
T PRK07814         89 DIVVNNVGG   97 (263)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.027  Score=50.33  Aligned_cols=75  Identities=24%  Similarity=0.366  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHhc-CCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIAG-AGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~~-~~g~d~v~d~~  261 (383)
                      .+++++|+||+|++|..+++.+...|++|+.++++.... ........ ..|..+..-.+    .+.+ .+.+|++|.++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   83 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNA   83 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            578999999999999999999988999999998764321 11111111 13444432222    2222 35789999999


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        84 g~   85 (252)
T PRK07856         84 GG   85 (252)
T ss_pred             CC
Confidence            85

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.02  E-value=0.035  Score=49.30  Aligned_cols=76  Identities=28%  Similarity=0.378  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCC-ee--eeCCChHHHH----HHh-cCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPN-LV--IDYNEPEAMH----SIA-GAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~-~v--~~~~~~~~~~----~i~-~~~g~d~  256 (383)
                      .+++++|+||+|++|..++..+...|++|+++++++..   +...+.+.. .+  .|..+.+-..    .+. ..+++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999998899999999875422   233344432 12  3444432222    222 2357999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      ++.++|.
T Consensus        84 li~~ag~   90 (248)
T TIGR01832        84 LVNNAGI   90 (248)
T ss_pred             EEECCCC
Confidence            9999885

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.05  Score=48.75  Aligned_cols=75  Identities=28%  Similarity=0.411  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcC-CC-e--eeeCCChHHHHH----Hhc--CCCccEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLN-PN-L--VIDYNEPEAMHS----IAG--AGPYDVI  257 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg-~~-~--v~~~~~~~~~~~----i~~--~~g~d~v  257 (383)
                      +++||+||+|++|..+++.+...|++|++++++.+ .+ +...++ .. .  ..|..+.+...+    +.+  .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            47999999999999999988888999999986543 32 333332 11 1  135444332222    211  3579999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      +.++|..
T Consensus        82 i~~ag~~   88 (260)
T PRK08267         82 FNNAGIL   88 (260)
T ss_pred             EECCCCC
Confidence            9999864

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.038  Score=51.28  Aligned_cols=76  Identities=24%  Similarity=0.360  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh----cC-CC-ee--eeCCChH----HHHHHhc-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS----LN-PN-LV--IDYNEPE----AMHSIAG-AG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~----lg-~~-~v--~~~~~~~----~~~~i~~-~~  252 (383)
                      .+++++|+||++++|..++..+...|++|+.++++++ . +...+    .+ .. .+  .|..+.+    +.+.+.+ .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999988889999999997643 2 22221    11 11 11  3544433    2233322 35


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      .+|++|+++|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            79999999885

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.017  Score=51.80  Aligned_cols=74  Identities=27%  Similarity=0.379  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHh-cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIA-GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~-~~~g~d~v~d~~  261 (383)
                      ++++++|+|++|++|..+++.+...|++|++++++.......  .... ..|..+.+-.+    ++. ..+++|++|+++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   85 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPE--GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL   85 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCC--ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            578999999999999999999888999999998764332111  1111 13444433222    222 236799999999


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        86 g~   87 (260)
T PRK06523         86 GG   87 (260)
T ss_pred             cc
Confidence            84

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.00  E-value=0.036  Score=51.58  Aligned_cols=76  Identities=22%  Similarity=0.392  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcC---CC-ee--eeCCChHHHH----HHhcC-CCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLN---PN-LV--IDYNEPEAMH----SIAGA-GPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg---~~-~v--~~~~~~~~~~----~i~~~-~g~  254 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. . +...++.   .. .+  .|..+.....    .+.+. +++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            5789999999999999999988888999999986643 2 2333332   11 11  3444433222    22222 469


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        85 D~li~nAg~   93 (322)
T PRK07453         85 DALVCNAAV   93 (322)
T ss_pred             cEEEECCcc
Confidence            999999883

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.00  E-value=0.046  Score=48.89  Aligned_cols=76  Identities=17%  Similarity=0.264  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcCCCee-eeCCChHHHHHH----h-cCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLNPNLV-IDYNEPEAMHSI----A-GAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg~~~v-~~~~~~~~~~~i----~-~~~g~d~v~d  259 (383)
                      .+++++|+||+|++|..+++.+...|++|+.+.+.. + .+.+.+.+...+ .|..+..-.+.+    . ..+++|++|.
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            568999999999999999999988999998876432 2 223333333222 344443322222    2 2357999999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9876

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.99  E-value=0.047  Score=49.01  Aligned_cols=76  Identities=25%  Similarity=0.382  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch-H----HHHHhcCCCee--eeCCChH----HHHHHhc-CCC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA-K----DLVTSLNPNLV--IDYNEPE----AMHSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~-~----~~~~~lg~~~v--~~~~~~~----~~~~i~~-~~g  253 (383)
                      ++++++|+||+  +++|.++++.+...|++|+.+.++++ .    +..++++....  .|..+..    +.+.+.+ .+.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            57899999987  49999999988889999998886542 1    22334443222  2433322    2223322 367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        89 ld~lv~nAg~   98 (258)
T PRK07533         89 LDFLLHSIAF   98 (258)
T ss_pred             CCEEEEcCcc
Confidence            9999999875

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.051  Score=48.50  Aligned_cols=76  Identities=18%  Similarity=0.340  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCe--e--eeCCChHHHH----HHhc-CCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNL--V--IDYNEPEAMH----SIAG-AGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~--v--~~~~~~~~~~----~i~~-~~g~d~v  257 (383)
                      .+++++|+||+|++|..+++.+...|++|+.++++.+. +...++....  .  .|..+..-.+    .+.+ .+++|++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            56799999999999999998888899999999876543 2333322111  2  3433322111    2211 2579999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        94 i~~ag~   99 (255)
T PRK06841         94 VNSAGV   99 (255)
T ss_pred             EECCCC
Confidence            999985

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.059  Score=48.11  Aligned_cols=76  Identities=22%  Similarity=0.301  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCCe-e--eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPNL-V--IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~~-v--~~~~~~~~~~----~i~-~~~g~  254 (383)
                      .+++++|+||+|++|..++..+...|++|+.+++++ +.+ .   +++.+... .  .|..+.+-.+    .+. +.+.+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            467999999999999999998888999999998654 322 2   22334321 1  2444433222    222 23579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.037  Score=49.59  Aligned_cols=76  Identities=24%  Similarity=0.369  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc-----CCC-ee--eeCCChHHHH----HHh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL-----NPN-LV--IDYNEPEAMH----SIA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l-----g~~-~v--~~~~~~~~~~----~i~-~~~  252 (383)
                      .+++++|+|++|++|..+++.+...|++|+.++++++ . +...++     +.. .+  .|..+..-..    .+. ..+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5689999999999999999999999999999886542 2 222222     211 11  2444432222    222 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            79999999985

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.94  E-value=0.051  Score=53.19  Aligned_cols=76  Identities=28%  Similarity=0.389  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH----HHHHhcCCCee-eeCCChHHHHHHh----c-CCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK----DLVTSLNPNLV-IDYNEPEAMHSIA----G-AGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~----~~~~~lg~~~v-~~~~~~~~~~~i~----~-~~g~d~v  257 (383)
                      ++++++|+|++|++|..+++.+...|++|+++.++...    +...+++...+ .|..+.+..+.+.    + .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            47899999999999999999999999999998864321    23345554333 4655544333332    2 3479999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus       289 i~~AG~  294 (450)
T PRK08261        289 VHNAGI  294 (450)
T ss_pred             EECCCc
Confidence            999985

>PRK05717 oxidoreductase; Validated

Probab=95.93  E-value=0.054  Score=48.42  Aligned_cols=78  Identities=22%  Similarity=0.262  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-ee--eeCCChHHH----HHHh-cCCCccE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LV--IDYNEPEAM----HSIA-GAGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v--~~~~~~~~~----~~i~-~~~g~d~  256 (383)
                      .++++++|+||+|++|..++..+...|++|+.++++. +. +...+++.. ..  .|..+.+-.    +.+. ..+.+|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999999999999999998888899999987553 22 333444432 11  344443322    2222 2357999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|.++|..
T Consensus        88 li~~ag~~   95 (255)
T PRK05717         88 LVCNAAIA   95 (255)
T ss_pred             EEECCCcc
Confidence            99999853

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.93  E-value=0.037  Score=49.61  Aligned_cols=76  Identities=22%  Similarity=0.370  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHH----HHHhcCCC-ee--eeCCChHHHHH----Hhc-CCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKD----LVTSLNPN-LV--IDYNEPEAMHS----IAG-AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~----~~~~lg~~-~v--~~~~~~~~~~~----i~~-~~g~d  255 (383)
                      .++++||+||+|++|..+++.+...|++|++++++++.+    ...+.+.. ..  .|..+.+..+.    +.+ .+++|
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   93 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID   93 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999998664332    22233432 11  34444332222    222 35799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        94 ~li~~ag~  101 (258)
T PRK06935         94 ILVNNAGT  101 (258)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK12939 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.076  Score=47.11  Aligned_cols=77  Identities=25%  Similarity=0.322  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHH---HhcCCC-ee--eeCCChHHHHHHhc-----CCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLV---TSLNPN-LV--IDYNEPEAMHSIAG-----AGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~---~~lg~~-~v--~~~~~~~~~~~i~~-----~~g  253 (383)
                      -++++++|+|++|++|..++..+...|++|+++.++++ . +..   ++.+.. .+  .|..+....+.+.+     .++
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999889999999886543 2 222   223322 12  24444333322221     257


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        85 id~vi~~ag~   94 (250)
T PRK12939         85 LDGLVNNAGI   94 (250)
T ss_pred             CCEEEECCCC
Confidence            9999999986

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.92  E-value=0.059  Score=48.24  Aligned_cols=76  Identities=21%  Similarity=0.319  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCCee---eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPNLV---IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~  254 (383)
                      +++++||+|++|++|..++..+...|++|+++++++. . +.   .++.+....   .|..+.+..+.+    . ..+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999998886642 2 22   233443321   244443322222    1 12569


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999985

>PRK08589 short chain dehydrogenase; Validated

Probab=95.91  E-value=0.061  Score=48.67  Aligned_cols=76  Identities=24%  Similarity=0.327  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHH-HHH---hcCCC-e--eeeCCChHHH----HHHhc-CCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKD-LVT---SLNPN-L--VIDYNEPEAM----HSIAG-AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~-~~~---~lg~~-~--v~~~~~~~~~----~~i~~-~~g~d  255 (383)
                      +++++||+||++++|..+++.+...|++|++++++++.+ .+.   +.+.. .  ..|..+..-.    +.+.+ .+.+|
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD   84 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence            578999999999999999988888899999999764332 222   22322 1  1344443322    22222 36799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        85 ~li~~Ag~   92 (272)
T PRK08589         85 VLFNNAGV   92 (272)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.056  Score=48.26  Aligned_cols=76  Identities=22%  Similarity=0.301  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCCe-e--eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPNL-V--IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~~-v--~~~~~~~~~~----~i~-~~~g~  254 (383)
                      .+++++|+|++|++|..+++.+...|++|+++.++. +.+ ...   ..+... .  .|..+.+-.+    ++. ..+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999988654 222 222   223221 1  3444433222    222 23679


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.90  E-value=0.045  Score=48.92  Aligned_cols=76  Identities=24%  Similarity=0.309  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCC--ee--eeCCChH----HHHHHhc-CCCcc
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPN--LV--IDYNEPE----AMHSIAG-AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~--~v--~~~~~~~----~~~~i~~-~~g~d  255 (383)
                      .+++++|+||+  +++|.++++.+...|++|+.+.++++. +.++++...  ..  .|..+..    +.+.+.+ .+.+|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            57899999988  799999998888899999998866432 233333211  11  3444332    2222322 36799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++++++|.
T Consensus        86 ~lv~nAg~   93 (252)
T PRK06079         86 GIVHAIAY   93 (252)
T ss_pred             EEEEcccc
Confidence            99999884

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.89  E-value=0.06  Score=48.90  Aligned_cols=76  Identities=20%  Similarity=0.322  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----H-HHHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----K-DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~-~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g  253 (383)
                      .+++++|+||+  +++|+++++.+...|++|+.+.++++    . +...+++....  .|..+.+-.    +.+.+ .+.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999986  79999999988889999998886542    1 22234453322  344443322    22222 367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus        84 iDilVnnAG~   93 (274)
T PRK08415         84 IDFIVHSVAF   93 (274)
T ss_pred             CCEEEECCcc
Confidence            9999999985

>PRK08264 short chain dehydrogenase; Validated

Probab=95.89  E-value=0.05  Score=47.97  Aligned_cols=74  Identities=27%  Similarity=0.441  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchHHHHHhcCCC-ee--eeCCChHHHHHH-hcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAKDLVTSLNPN-LV--IDYNEPEAMHSI-AGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~i-~~~~g~d~v~d~~g  262 (383)
                      .+.+++|+||+|++|..+++.+...|+ +|+++.++.+...  +.+.. .+  .|..+..-..++ ...+.+|++|.++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT--DLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh--hcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            567899999999999999999999999 9998886643211  12221 12  344443322333 23356899999998


Q ss_pred             C
Q psy9949         263 I  263 (383)
Q Consensus       263 ~  263 (383)
                      .
T Consensus        83 ~   83 (238)
T PRK08264         83 I   83 (238)
T ss_pred             c
Confidence            7

>PRK06194 hypothetical protein; Provisional

Probab=95.85  E-value=0.045  Score=49.86  Aligned_cols=77  Identities=18%  Similarity=0.294  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHh---cCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTS---LNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~---lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      +++++||+||+|++|..++..+...|++|++++++. .. +...+   .+... +  .|..+....+.+.     ..+++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999998888999999988653 22 22222   23221 1  2444432222221     13578


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        85 d~vi~~Ag~~   94 (287)
T PRK06194         85 HLLFNNAGVG   94 (287)
T ss_pred             CEEEECCCCC
Confidence            9999999863

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.85  E-value=0.041  Score=49.18  Aligned_cols=76  Identities=21%  Similarity=0.316  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCC-ee--eeCCChHHH----HHHhc-CCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPN-LV--IDYNEPEAM----HSIAG-AGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g~d~  256 (383)
                      .+++++|+|++|++|.++++.+...|++|+.+.+.+..   +.+++.+.. ..  .|..+.+-.    +.+.+ .+.+|+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            57899999999999999999999999999887754322   223334422 11  233332222    22222 357999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|.++|.
T Consensus        89 li~~Ag~   95 (253)
T PRK08993         89 LVNNAGL   95 (253)
T ss_pred             EEECCCC
Confidence            9999985

>PRK06398 aldose dehydrogenase; Validated

Probab=95.84  E-value=0.037  Score=49.71  Aligned_cols=72  Identities=25%  Similarity=0.366  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHh-cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIA-GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~-~~~g~d~v~d~~  261 (383)
                      .+++++|+||++++|..++..+...|++|+.+.+++....    .... ..|..+..-.+    .+. ..+++|++|.++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A   80 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            5689999999999999999999999999999886543211    1111 13444433222    222 235799999998


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        81 g~   82 (258)
T PRK06398         81 GI   82 (258)
T ss_pred             CC
Confidence            85

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.059  Score=48.12  Aligned_cols=74  Identities=23%  Similarity=0.259  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH----HhcCCC-ee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV----TSLNPN-LV--IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~----~~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      ++++||+||+|++|..+++.+...|++|++++++.. .+.+    ...+.. .+  .|..+..-..... ..++|++|.+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAA-EWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh-cCCCCEEEEC
Confidence            358999999999999999999999999999987542 2221    223322 12  3444432222221 2479999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus        81 ag~   83 (257)
T PRK09291         81 AGI   83 (257)
T ss_pred             CCc
Confidence            884

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.052  Score=48.80  Aligned_cols=77  Identities=26%  Similarity=0.382  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc--CCC-ee--eeCCChHHH----HHHhcCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL--NPN-LV--IDYNEPEAM----HSIAGAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l--g~~-~v--~~~~~~~~~----~~i~~~~g~d~  256 (383)
                      ++.+++|+||+|++|..++..+...|++|+++++++. .+ ...++  +.. ..  .|..+..-.    +.+.+.+.+|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            5678999999999999999988889999999996643 22 22222  211 12  233333222    22223467999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|.++|..
T Consensus        84 lv~~ag~~   91 (263)
T PRK09072         84 LINNAGVN   91 (263)
T ss_pred             EEECCCCC
Confidence            99998863

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.042  Score=49.12  Aligned_cols=77  Identities=17%  Similarity=0.200  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cCCC---eeeeCCChHHHHH----H-hcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LNPN---LVIDYNEPEAMHS----I-AGAGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg~~---~v~~~~~~~~~~~----i-~~~~g  253 (383)
                      -++++++|+||+|++|..++..+...|++|+.+++++. . +...+   .+..   ...|..+....+.    + ...+.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999986542 2 22222   2322   1134444332222    1 12357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            9999999975

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.047  Score=48.76  Aligned_cols=77  Identities=26%  Similarity=0.337  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCC-Cee--eeCCCh-HHHHHHh----cCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNP-NLV--IDYNEP-EAMHSIA----GAGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~-~~v--~~~~~~-~~~~~i~----~~~g  253 (383)
                      .++++++|+||+|++|..++..+...|++|++++++. +.+ ...   ..+. ..+  .|..+. ++.+.+.    ..++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            3678999999999999999999998999999998654 322 222   1221 122  233332 2222222    1357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.052  Score=48.80  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH----hcCCCee----eeCCChHHH----HHHhc-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT----SLNPNLV----IDYNEPEAM----HSIAG-AG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~----~lg~~~v----~~~~~~~~~----~~i~~-~~  252 (383)
                      .+++++|+||++++|..+++.+...|++|++++++. +.+ ...    ..+...+    .|..+.+-.    +.+.+ .+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999998654 222 111    1221122    344443322    22222 35


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|+++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.063  Score=48.72  Aligned_cols=76  Identities=18%  Similarity=0.195  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~  254 (383)
                      ++++++|+||+|++|..++..+...|++|++++++. +.+ ...   +.+.. ..  .|..+.+-..    .+. ..+.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999988999999888653 222 222   23332 11  2444432222    222 23579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999999985

>PRK07806 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.087  Score=46.77  Aligned_cols=76  Identities=20%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHH-H---HHhcCCC-ee--eeCCChHHHHH----Hhc-CCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKD-L---VTSLNPN-LV--IDYNEPEAMHS----IAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~-~---~~~lg~~-~v--~~~~~~~~~~~----i~~-~~g  253 (383)
                      .+++++|+||+|++|..++..+...|++|+++.++.  +.+ .   ++..+.. ..  .|..+.+-...    +.+ .++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            568999999999999999998888999999888653  222 2   2222322 11  34444332222    221 257


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        85 ~d~vi~~ag~   94 (248)
T PRK07806         85 LDALVLNASG   94 (248)
T ss_pred             CcEEEECCCC
Confidence            9999998875

>PLN02253 xanthoxin dehydrogenase

Probab=95.76  E-value=0.067  Score=48.55  Aligned_cols=76  Identities=24%  Similarity=0.363  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC--C-ee--eeCCChHHHHH----Hhc-CCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP--N-LV--IDYNEPEAMHS----IAG-AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~--~-~v--~~~~~~~~~~~----i~~-~~g~d  255 (383)
                      .+++++|+||+|++|..+++.+...|++|+++++.++ . +...+++.  . ..  .|..+.+..+.    +.+ .+++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999888888999999986532 2 23333321  1 11  34444332222    222 35799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99999885

>PRK06720 hypothetical protein; Provisional

Probab=95.74  E-value=0.12  Score=43.19  Aligned_cols=77  Identities=19%  Similarity=0.252  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCCe-e--eeCCChH----HHHHH-hcCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPNL-V--IDYNEPE----AMHSI-AGAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~~-v--~~~~~~~----~~~~i-~~~~g~  254 (383)
                      ++++++|.||++++|..++..+...|++|+.+.+++. . +...   +.+... .  .|..+..    +.+++ .+.+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999888888999999885532 2 1222   234331 2  2333322    22222 234679


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        95 DilVnnAG~~  104 (169)
T PRK06720         95 DMLFQNAGLY  104 (169)
T ss_pred             CEEEECCCcC
Confidence            9999998853

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.74  E-value=0.058  Score=48.19  Aligned_cols=77  Identities=23%  Similarity=0.375  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~  254 (383)
                      ++++++|+||+|++|..+++.+...|++|+.+.+++. . +.   .++.|.. ..  .|..+......+    . ..+++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999988888999998886643 2 22   2222322 11  244443322222    1 23579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        89 d~li~~ag~~   98 (255)
T PRK07523         89 DILVNNAGMQ   98 (255)
T ss_pred             CEEEECCCCC
Confidence            9999999863

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.72  E-value=0.054  Score=48.58  Aligned_cols=77  Identities=21%  Similarity=0.314  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCc--h-H-HHHHhcCCC-ee--eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSGD--A-K-DLVTSLNPN-LV--IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~~--~-~-~~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g  253 (383)
                      .+++++|+|+  ++++|.++++.+...|++|+.+++++  + . +...+++.. ..  .|..+.+-.    +.+.+ .++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999998  79999999998888999999988543  1 2 233334321 11  344443322    22222 367


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        86 iD~li~nAG~~   96 (256)
T PRK07889         86 LDGVVHSIGFA   96 (256)
T ss_pred             CcEEEEccccc
Confidence            99999998853

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.71  E-value=0.078  Score=47.49  Aligned_cols=76  Identities=20%  Similarity=0.222  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHH---hcCCCe---eeeCCChHHH----HHHh-cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVT---SLNPNL---VIDYNEPEAM----HSIA-GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~---~lg~~~---v~~~~~~~~~----~~i~-~~~g~d  255 (383)
                      .+++++|+||+|++|..+++.+...|++|+++++++.. +...   ..+.+.   ..|..+....    +.+. ..+++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            46899999999999999999998899999998876432 2222   233321   1354443222    2222 235799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        87 ~lv~nAg~   94 (260)
T PRK12823         87 VLINNVGG   94 (260)
T ss_pred             EEEECCcc
Confidence            99999974

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.67  E-value=0.067  Score=51.33  Aligned_cols=75  Identities=21%  Similarity=0.232  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCC-ee--eeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPN-LV--IDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      ++++++|+||+|++|.+++..+...|++|+++++++ +.+ ...+.+.. ..  .|..+.+....  ..+++|++|.++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~--~l~~IDiLInnAG  254 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE--LLEKVDILIINHG  254 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH--HhCCCCEEEECCC
Confidence            467999999999999999998888899999988653 222 12211111 12  34444322111  1357999999887


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus       255 i~  256 (406)
T PRK07424        255 IN  256 (406)
T ss_pred             cC
Confidence            53

>PRK06484 short chain dehydrogenase; Validated

Probab=95.66  E-value=0.064  Score=53.48  Aligned_cols=77  Identities=27%  Similarity=0.440  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCe---eeeCCChHHHHH----Hhc-CCCccE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNL---VIDYNEPEAMHS----IAG-AGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~---v~~~~~~~~~~~----i~~-~~g~d~  256 (383)
                      ..+++++|+|+++++|.++++.+...|++|+.++++. +. +..++++...   ..|..+..-.+.    +.+ .+++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999999999999999999999999999998653 33 3445555432   235444332222    222 367999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|+++|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9999885

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.054  Score=48.44  Aligned_cols=76  Identities=21%  Similarity=0.344  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHH---hcCCC-ee--eeCCChHHHHH----Hhc-CCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVT---SLNPN-LV--IDYNEPEAMHS----IAG-AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~---~lg~~-~v--~~~~~~~~~~~----i~~-~~g~d  255 (383)
                      ++++++|+||+|++|..+++.+...|++|+++++++. .+..+   +.+.. ..  .|..+..-.+.    +.+ .+++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            5679999999999999999888889999988886543 23222   23322 12  34444332222    211 25799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        86 ~vi~~ag~   93 (258)
T PRK08628         86 GLVNNAGV   93 (258)
T ss_pred             EEEECCcc
Confidence            99999984

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.1  Score=46.18  Aligned_cols=77  Identities=25%  Similarity=0.369  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g  253 (383)
                      ...++++|+|++|++|..++..+...|++|++++++.+ . +...   +.+.. .+  .|..+.+...    .+. ..++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56678999999999999999999889999999997643 2 2222   22322 12  2444332222    221 1357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            9999999985

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.086  Score=47.67  Aligned_cols=74  Identities=28%  Similarity=0.429  Sum_probs=49.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HH---HhcCCCe----eeeCCChHHHH----HHh-cCCCccE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LV---TSLNPNL----VIDYNEPEAMH----SIA-GAGPYDV  256 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~---~~lg~~~----v~~~~~~~~~~----~i~-~~~g~d~  256 (383)
                      +++|+||+|++|..+++.+...|++|+++.++++ .+ ..   +..+...    ..|..+....+    .+. ..+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999998889999988886542 22 22   2233321    24555543322    222 2357999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|.++|..
T Consensus        82 lv~~ag~~   89 (272)
T PRK07832         82 VMNIAGIS   89 (272)
T ss_pred             EEECCCCC
Confidence            99999853

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.089  Score=46.92  Aligned_cols=75  Identities=23%  Similarity=0.368  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCC-eee--eCCChHHHHH----Hh-cCCCcc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPN-LVI--DYNEPEAMHS----IA-GAGPYD  255 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~-~v~--~~~~~~~~~~----i~-~~~g~d  255 (383)
                      +++++|+|++|++|..+++.+...|++|++++++.. .+ .   +++.+.. ..+  |..+.+-.++    +. ..+++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999999999999986542 22 2   2222322 222  4444332222    21 235799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|+++|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.63  E-value=0.097  Score=46.17  Aligned_cols=77  Identities=29%  Similarity=0.388  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHHH-Hhc----CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMHS-IAG----AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~~-i~~----~~g~  254 (383)
                      ++++++|+|++|++|..+++.+...|.+|+++.++. +.+    ..++.+....   .|..+.....+ +.+    .+++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999888899998888664 222    2223343222   34444332222 221    2578


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |.++.++|..
T Consensus        84 d~vi~~ag~~   93 (246)
T PRK05653         84 DILVNNAGIT   93 (246)
T ss_pred             CEEEECCCcC
Confidence            9999998763

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.022  Score=50.16  Aligned_cols=72  Identities=25%  Similarity=0.373  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCC-eeeeCCChHHH----HHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPN-LVIDYNEPEAM----HSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~-~v~~~~~~~~~----~~i~~~~g~d~v~d~~g  262 (383)
                      .+++++|+||+|++|..+++.+...|++|+++.++....    .... ...|..+....    +.+.+..++|++|.++|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag   77 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG   77 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence            357899999999999999999988999999998764332    1111 12344443322    22222346899999988


Q ss_pred             C
Q psy9949         263 I  263 (383)
Q Consensus       263 ~  263 (383)
                      .
T Consensus        78 ~   78 (234)
T PRK07577         78 I   78 (234)
T ss_pred             C
Confidence            5

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.095  Score=46.81  Aligned_cols=76  Identities=17%  Similarity=0.219  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--h-HHHH---HhcCCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--A-KDLV---TSLNPN-LV--IDYNEPEAMH----SIA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~-~~~~---~~lg~~-~v--~~~~~~~~~~----~i~-~~~g  253 (383)
                      ++++++|+|+++++|..+++.+...|++|++++++.  . .+..   ++.+.. ..  .|..+.+-..    ++. ..+.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999988543  2 1222   233322 11  2433332222    222 2367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.56  E-value=0.097  Score=50.17  Aligned_cols=78  Identities=27%  Similarity=0.443  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH--------HHHHhc-CCCee-eeCCChHHHHHHhc-CC-Cc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--------DLVTSL-NPNLV-IDYNEPEAMHSIAG-AG-PY  254 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~--------~~~~~l-g~~~v-~~~~~~~~~~~i~~-~~-g~  254 (383)
                      ..+.+|+|+||+|.+|..++..+...|.+|++++++...        +..... +...+ .|..+.+....+.+ .+ ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            567899999999999999999998899999999965421        111112 23222 35555443333332 22 79


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |+||+|++..
T Consensus       138 D~Vi~~aa~~  147 (390)
T PLN02657        138 DVVVSCLASR  147 (390)
T ss_pred             cEEEECCccC
Confidence            9999998753

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.078  Score=46.47  Aligned_cols=72  Identities=17%  Similarity=0.272  Sum_probs=48.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCee-eeCCChHHHHHHhc-C-CCccEEEEcCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLV-IDYNEPEAMHSIAG-A-GPYDVILDAAG  262 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v-~~~~~~~~~~~i~~-~-~g~d~v~d~~g  262 (383)
                      +++|+||+|++|..+++.+...|++|+.+.+++ +.+ ..++++...+ .|..+....+.+.+ . ..+|++++++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            589999999999999999888899999988654 332 3344444322 35444433333222 2 36899999876

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.54  E-value=0.082  Score=47.38  Aligned_cols=73  Identities=19%  Similarity=0.216  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCCee--eeCCChHHHHH----Hh-cCCCccEEE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPNLV--IDYNEPEAMHS----IA-GAGPYDVIL  258 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~~v--~~~~~~~~~~~----i~-~~~g~d~v~  258 (383)
                      +++|+||++++|..+++.+...|++|+.+.+++. . +...   +.+....  .|..+.+..++    +. ..+++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899999999999999988889999999986643 2 2222   2232222  34444332222    22 236799999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      .++|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            99985

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.075  Score=47.19  Aligned_cols=76  Identities=22%  Similarity=0.371  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~  254 (383)
                      ++++++|+|++|++|..+++.+...|++|+.+.+++. . +...   +.+.. ..  .|..+..-..    .+. ..+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            5678999999999999999988888999999997642 2 2222   22221 11  3444432222    222 22579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK12743 oxidoreductase; Provisional

Probab=95.53  E-value=0.11  Score=46.53  Aligned_cols=75  Identities=19%  Similarity=0.295  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-HH----HHHhcCCC-ee--eeCCChHHH----HHHh-cCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-KD----LVTSLNPN-LV--IDYNEPEAM----HSIA-GAGPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~~----~~~~lg~~-~v--~~~~~~~~~----~~i~-~~~g~  254 (383)
                      +++++|+||+|++|..+++.+...|++|+.+.+ +.+ .+    .++..+.. ..  .|..+..-.    +.+. ..+++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999988864 322 21    22234432 22  344443322    2222 23579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.52  E-value=0.048  Score=48.43  Aligned_cols=76  Identities=21%  Similarity=0.342  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcC--CC-ee--eeCCChHHHHHH-----hcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLN--PN-LV--IDYNEPEAMHSI-----AGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg--~~-~v--~~~~~~~~~~~i-----~~~~g~d  255 (383)
                      ++.+++|+||+|++|..+++.+...|++|++++++.. .+ ....+.  .. ..  .|..+.+-...+     ...+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999998888999999997643 22 223222  11 11  233333322222     1235799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.51  E-value=0.096  Score=46.81  Aligned_cols=76  Identities=20%  Similarity=0.318  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHHH----Hh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMHS----IA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~~----i~-~~~g~d~v  257 (383)
                      .+++++|+|++|++|..+++.+...|++|+.++++.+ . +...+++.. ..  .|..+.+-.+.    +. ..+++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5678999999999999999999989999999986643 2 233334322 11  23333322222    21 23579999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      +.++|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            999875

>KOG0725|consensus

Probab=95.49  E-value=0.1  Score=47.19  Aligned_cols=79  Identities=24%  Similarity=0.334  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH--HHHH---hcCCC------eeeeCCChHHHHH-----Hhc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK--DLVT---SLNPN------LVIDYNEPEAMHS-----IAG  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~--~~~~---~lg~~------~v~~~~~~~~~~~-----i~~  250 (383)
                      -.+++++|+|++.++|.+++..+...|++|+.+.++++.  +.+.   ..+..      .+.|..+.+..+.     +.+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            378899999999999999999999999999999976542  2222   22221      1234443332222     223


Q ss_pred             -CCCccEEEEcCCCCc
Q psy9949         251 -AGPYDVILDAAGIPL  265 (383)
Q Consensus       251 -~~g~d~v~d~~g~~~  265 (383)
                       .+..|+.++++|...
T Consensus        86 ~~GkidiLvnnag~~~  101 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALG  101 (270)
T ss_pred             hCCCCCEEEEcCCcCC
Confidence             367999999988643

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.072  Score=46.89  Aligned_cols=76  Identities=25%  Similarity=0.358  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC---Cee--eeCCChH-HHHHHhc----CCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP---NLV--IDYNEPE-AMHSIAG----AGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~---~~v--~~~~~~~-~~~~i~~----~~g~d  255 (383)
                      .+.+++|+||+|++|..+++.+...|++|++++++.. . +..+++..   ...  .|..+.. +.+.+.+    .+++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5689999999999999999888888999999986542 2 23333321   112  2434332 2222221    25799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99999875

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.49  E-value=0.14  Score=46.65  Aligned_cols=75  Identities=21%  Similarity=0.217  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -+|++|+|.|+++-+|..++.++...|++|+..-+. ..                 ++.+.+   .++|++|.++|.+..
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~-t~-----------------~L~~~~---~~aDIvI~AtG~~~~  215 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR-TQ-----------------NLPELV---KQADIIVGAVGKPEL  215 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC-ch-----------------hHHHHh---ccCCEEEEccCCCCc
Confidence            478899999944449999999999999976655542 11                 111111   368999999987663


Q ss_pred             cccccccccccCCCceEEEec
Q psy9949         267 QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~  287 (383)
                       ..  .+.++  ++..+++++
T Consensus       216 -v~--~~~lk--~gavViDvg  231 (283)
T PRK14192        216 -IK--KDWIK--QGAVVVDAG  231 (283)
T ss_pred             -CC--HHHcC--CCCEEEEEE
Confidence             33  45677  888888875

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=95.48  E-value=0.022  Score=49.35  Aligned_cols=97  Identities=23%  Similarity=0.233  Sum_probs=62.3

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchH-----HHHHhcCCCee-eeCCChHHHHHHhc
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAK-----DLVTSLNPNLV-IDYNEPEAMHSIAG  250 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~-----~~~~~lg~~~v-~~~~~~~~~~~i~~  250 (383)
                      ...+    ++|++||-.|  +|.|+.++-+++..|.  +|+.+...+..     +.++.++.+++ +...+  ......+
T Consensus        67 ~L~l----~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g~~g~~~  138 (209)
T PF01135_consen   67 ALDL----KPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--GSEGWPE  138 (209)
T ss_dssp             HTTC-----TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---GGGTTGG
T ss_pred             HHhc----CCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--hhhcccc
Confidence            5567    9999999998  5678888889988775  68888866542     34445666544 22222  1122223


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .++||.|+-+.+-+..... +++.|+  ++|++|..
T Consensus       139 ~apfD~I~v~~a~~~ip~~-l~~qL~--~gGrLV~p  171 (209)
T PF01135_consen  139 EAPFDRIIVTAAVPEIPEA-LLEQLK--PGGRLVAP  171 (209)
T ss_dssp             G-SEEEEEESSBBSS--HH-HHHTEE--EEEEEEEE
T ss_pred             CCCcCEEEEeeccchHHHH-HHHhcC--CCcEEEEE
Confidence            4689999988877665433 588999  99999875

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.079  Score=47.42  Aligned_cols=78  Identities=19%  Similarity=0.317  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCc-hHH----HHHhcCCCe---eeeCCChHHHHHHh-----cCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSGD-AKD----LVTSLNPNL---VIDYNEPEAMHSIA-----GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~~-~~~----~~~~lg~~~---v~~~~~~~~~~~i~-----~~~  252 (383)
                      -++++++|+|++|++|..+++.+...|++ |++++++. +..    .+++.+...   ..|..+.+...++.     ..+
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            36789999999999999999999999997 88888653 222    223334321   13554433322222     125


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|.++|..
T Consensus        84 ~id~li~~ag~~   95 (260)
T PRK06198         84 RLDALVNAAGLT   95 (260)
T ss_pred             CCCEEEECCCcC
Confidence            799999999853

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.46  E-value=0.093  Score=47.17  Aligned_cols=76  Identities=22%  Similarity=0.393  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCee--eeCCChHHHH----HHhc-CCC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMH----SIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~----~i~~-~~g  253 (383)
                      .+++++|+||++  ++|.++++.+...|++|+...++++ .+    +..+.+....  .|..+.+-.+    .+.+ .+.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999886  8999998888888999988876532 12    2233343322  3444433222    2222 367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++++++|.
T Consensus        87 iDilVnnag~   96 (260)
T PRK06603         87 FDFLLHGMAF   96 (260)
T ss_pred             ccEEEEcccc
Confidence            9999998874

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.11  Score=45.70  Aligned_cols=76  Identities=12%  Similarity=0.151  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCe-e--eeCCChHHH----HHHh-cCC-C
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNL-V--IDYNEPEAM----HSIA-GAG-P  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~-v--~~~~~~~~~----~~i~-~~~-g  253 (383)
                      ++++++|+|+++++|.+++..+...|++|+.+.++++ .+ .   .++.+.+. .  .|..+.+-.    +.+. ..+ .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999998888889999999886543 22 2   22334331 1  233333222    2222 235 7


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        84 iD~li~nag~   93 (227)
T PRK08862         84 PDVLVNNWTS   93 (227)
T ss_pred             CCEEEECCcc
Confidence            9999999974

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.12  Score=46.20  Aligned_cols=76  Identities=30%  Similarity=0.449  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh----cCCC-ee--eeCCChHHHHH-HhcCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS----LNPN-LV--IDYNEPEAMHS-IAGAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~----lg~~-~v--~~~~~~~~~~~-i~~~~g~d~v  257 (383)
                      ++++++|+|+++++|..+++.+...|++|++++++.. .+ ...+    .+.. ..  .|..+.+-... +...+.+|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999988889999999986542 22 2221    2321 12  24433322222 2334679999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        86 v~~ag~   91 (259)
T PRK06125         86 VNNAGA   91 (259)
T ss_pred             EECCCC
Confidence            999885

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.12  Score=46.15  Aligned_cols=76  Identities=22%  Similarity=0.314  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCC-ee--eeCCChHHH----HHHhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPN-LV--IDYNEPEAM----HSIAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g~  254 (383)
                      ++++++|+|++|++|..+++.+...|++|+.++++.+ .+    ..++.+.. ..  .|..+.+-.    +.+.+ .+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999888888999999996642 21    22333432 12  244333222    22222 3578


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.094  Score=46.94  Aligned_cols=75  Identities=23%  Similarity=0.328  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCC--C-ee--eeCCChHHHHH----Hh-cCCCccE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNP--N-LV--IDYNEPEAMHS----IA-GAGPYDV  256 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~--~-~v--~~~~~~~~~~~----i~-~~~g~d~  256 (383)
                      +.+++|+||+|++|..++..+...|++|++++++. +.+ ...++..  . ..  .|..+.+-...    +. ..+.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            35899999999999999988888899999998653 322 2333321  1 11  34444332222    22 2356899


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|.++|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9999885

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.13  Score=46.57  Aligned_cols=76  Identities=14%  Similarity=0.185  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--------H-HH---HHhcCCCe-e--eeCCChHHHHH----H
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--------K-DL---VTSLNPNL-V--IDYNEPEAMHS----I  248 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--------~-~~---~~~lg~~~-v--~~~~~~~~~~~----i  248 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++..        . +.   .+..+... +  .|..+..-...    +
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            5679999999999999999988888999999986431        1 11   12233321 1  34444332222    2


Q ss_pred             h-cCCCccEEEEcCCC
Q psy9949         249 A-GAGPYDVILDAAGI  263 (383)
Q Consensus       249 ~-~~~g~d~v~d~~g~  263 (383)
                      . ..+.+|++|.++|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            1 23579999999885

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.1  Score=48.17  Aligned_cols=35  Identities=34%  Similarity=0.290  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .+++++|+||++++|.++++.+...|++|++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            57899999999999999999999899999998864

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.12  Score=45.95  Aligned_cols=76  Identities=22%  Similarity=0.300  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHH----HHhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~~-~~g~  254 (383)
                      ++++++|+||+|++|..+++.+...|++|+.++++. +.+ ..+   +.+.. ..  .|..+..-.+    ++.+ .+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            567999999999999999999998999999999653 222 222   22322 11  2443332222    2222 3579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |+++.++|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999999884

>PRK09186 flagellin modification protein A; Provisional

Probab=95.37  E-value=0.083  Score=47.11  Aligned_cols=76  Identities=24%  Similarity=0.337  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhc----CCC---e-eeeCCChHHHHH-Hh---c-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSL----NPN---L-VIDYNEPEAMHS-IA---G-AG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~l----g~~---~-v~~~~~~~~~~~-i~---~-~~  252 (383)
                      ++++++|+||+|++|..++..+...|++|+.++++. +. +.+.++    +..   . ..|..+.+-... +.   + .+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999998999999998653 32 222222    222   1 235444332222 22   1 35


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.+++.
T Consensus        83 ~id~vi~~A~~   93 (256)
T PRK09186         83 KIDGAVNCAYP   93 (256)
T ss_pred             CccEEEECCcc
Confidence            69999999863

>PRK06484 short chain dehydrogenase; Validated

Probab=95.36  E-value=0.093  Score=52.35  Aligned_cols=76  Identities=22%  Similarity=0.322  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCe---eeeCCChHHHHH----Hh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNL---VIDYNEPEAMHS----IA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~---v~~~~~~~~~~~----i~-~~~g~d~v  257 (383)
                      .+++++|+||++++|..+++.+...|++|+.++++. +.+ ..++++...   ..|..+.+-.+.    +. +.+.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999888999999998654 333 334444332   134444332222    22 23679999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus       348 i~nAg~  353 (520)
T PRK06484        348 VNNAGI  353 (520)
T ss_pred             EECCCC
Confidence            999985

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.12  Score=45.01  Aligned_cols=75  Identities=27%  Similarity=0.407  Sum_probs=49.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCe-eeeCCChHHHHHHh---cCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNL-VIDYNEPEAMHSIA---GAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~-v~~~~~~~~~~~i~---~~~g~d~v~d~~g~~  264 (383)
                      ++++|+|++|++|..+++.+...|++|+.++++. ..+.+...+... ..|..+.+..+.+.   ...++|++|.++|..
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~   81 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY   81 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence            4799999999999999888878899999988653 333344444332 23444433333322   123699999988764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.32  E-value=0.12  Score=46.07  Aligned_cols=76  Identities=21%  Similarity=0.375  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~  254 (383)
                      .++++||+||+|++|..+++.+...|++|+.+.++.. . +...   ..+.. ..  .|..+.+-.+    .+. ..+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999998889999999986642 2 2222   22322 11  2333332222    222 23579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |+++.++|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999985

>PRK06128 oxidoreductase; Provisional

Probab=95.32  E-value=0.12  Score=47.51  Aligned_cols=76  Identities=16%  Similarity=0.298  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---H----HHHHhcCCCee---eeCCChHHHHH----Hh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---K----DLVTSLNPNLV---IDYNEPEAMHS----IA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~----~~~~~lg~~~v---~~~~~~~~~~~----i~-~~~  252 (383)
                      .++++||+||+|++|..++..+...|++|+.+.++.+   .    +.++..+....   .|..+....+.    +. ..+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            5679999999999999999988889999988764321   1    12233343211   24444332222    22 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus       134 ~iD~lV~nAg~  144 (300)
T PRK06128        134 GLDILVNIAGK  144 (300)
T ss_pred             CCCEEEECCcc
Confidence            79999999985

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.1  Score=48.13  Aligned_cols=76  Identities=17%  Similarity=0.275  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh----c-CCC-ee--eeCCChHHH----HHHhc-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS----L-NPN-LV--IDYNEPEAM----HSIAG-AG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~----l-g~~-~v--~~~~~~~~~----~~i~~-~~  252 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ...+    . +.. ..  .|..+..-.    +.+.+ .+
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            6789999999999999999988888999999886532 21 1111    1 111 11  244443222    22222 35


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus        95 ~iD~li~nAg~  105 (306)
T PRK06197         95 RIDLLINNAGV  105 (306)
T ss_pred             CCCEEEECCcc
Confidence            79999999984

>PRK08643 acetoin reductase; Validated

Probab=95.30  E-value=0.12  Score=46.04  Aligned_cols=75  Identities=19%  Similarity=0.281  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHH---hcCCCe-e--eeCCChHHHHH----Hh-cCCCcc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVT---SLNPNL-V--IDYNEPEAMHS----IA-GAGPYD  255 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~---~lg~~~-v--~~~~~~~~~~~----i~-~~~g~d  255 (383)
                      +++++|+||+|++|..+++.+...|++|+.++++. +. +...   +.+... .  .|..+.+-..+    +. ..+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999988999999998654 22 2222   223221 1  24444332222    21 235799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999975

>PRK09242 tropinone reductase; Provisional

Probab=95.30  E-value=0.094  Score=46.89  Aligned_cols=76  Identities=16%  Similarity=0.222  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc-----CCCe-e--eeCCChHHH----HHHh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL-----NPNL-V--IDYNEPEAM----HSIA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l-----g~~~-v--~~~~~~~~~----~~i~-~~~  252 (383)
                      .+++++|+|++|++|..++..+...|++|++++++.+ . +...++     +... .  .|..+.+-.    +.+. ..+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999986542 2 222221     2211 1  244443222    2222 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|+++.++|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999986

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.081  Score=47.01  Aligned_cols=76  Identities=22%  Similarity=0.368  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc--CCC-ee--eeCCChHHHHHH----h-cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL--NPN-LV--IDYNEPEAMHSI----A-GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l--g~~-~v--~~~~~~~~~~~i----~-~~~g~d  255 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++.. . +...++  +.. ..  .|..+.....++    . ..+++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5679999999999999999888888999999996642 2 222222  221 12  244443322222    1 235799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      +++.++|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.29  E-value=0.1  Score=48.38  Aligned_cols=94  Identities=22%  Similarity=0.247  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCch-HH----HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDA-KD----LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~-~~----~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      +++++||..| +| .|..++.+++..+.  .|+++..+++ .+    .+++.|.+++..... +..+.+.+...+|+|+.
T Consensus        79 ~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~~~~fD~Ii~  155 (322)
T PRK13943         79 DKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPEFAPYDVIFV  155 (322)
T ss_pred             CCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-ChhhcccccCCccEEEE
Confidence            7889999999 55 69999999998764  6888885543 23    334567665432221 22222223357999999


Q ss_pred             cCCCCcccccccccccccCCCceEEEe
Q psy9949         260 AAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       260 ~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +.+....... +++.++  ++|+++..
T Consensus       156 ~~g~~~ip~~-~~~~Lk--pgG~Lvv~  179 (322)
T PRK13943        156 TVGVDEVPET-WFTQLK--EGGRVIVP  179 (322)
T ss_pred             CCchHHhHHH-HHHhcC--CCCEEEEE
Confidence            8775544333 277888  99998764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.28  E-value=0.07  Score=44.44  Aligned_cols=69  Identities=17%  Similarity=0.238  Sum_probs=48.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHH-HhcCC--CeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLV-TSLNP--NLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~-~~lg~--~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|.|+||+|-+|...++=|+.+|-.|++++++..+..+ ...-+  ..+++...  ..   ....|+|+||++.|..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~--~a---~~l~g~DaVIsA~~~~   73 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTS--LA---SDLAGHDAVISAFGAG   73 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhh--hH---hhhcCCceEEEeccCC
Confidence            58899999999999999999999999999987654322 11111  12333221  11   2246899999999876

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.26  E-value=0.14  Score=42.26  Aligned_cols=76  Identities=28%  Similarity=0.507  Sum_probs=47.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC---chH-HHH---HhcCCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG---DAK-DLV---TSLNPN-LV--IDYNEPEAMH----SIA-GAGP  253 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~---~~~-~~~---~~lg~~-~v--~~~~~~~~~~----~i~-~~~g  253 (383)
                      ++++|+||++++|..+++.+...|+ +|+.+.++   ++. ++.   +..+.. .+  .|..+..-.+    .+. ..+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999998888887777 66666666   222 222   333422 11  2433332222    222 2357


Q ss_pred             ccEEEEcCCCCc
Q psy9949         254 YDVILDAAGIPL  265 (383)
Q Consensus       254 ~d~v~d~~g~~~  265 (383)
                      +|++|.++|...
T Consensus        81 ld~li~~ag~~~   92 (167)
T PF00106_consen   81 LDILINNAGIFS   92 (167)
T ss_dssp             ESEEEEECSCTT
T ss_pred             cccccccccccc
Confidence            999999998754

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.26  E-value=0.15  Score=45.12  Aligned_cols=77  Identities=23%  Similarity=0.409  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-h-HHHH---HhcCCCee---eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-A-KDLV---TSLNPNLV---IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~-~~~~---~~lg~~~v---~~~~~~~~~----~~i~~-~~g  253 (383)
                      ++++++|+|++|++|..+++.+...|++|++..+. . + .+..   ++.+....   .|..+..-.    +++.+ .++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            36789999999999999999999999998886532 2 1 1222   23343322   344443222    22222 367


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus        82 id~li~~ag~~   92 (246)
T PRK12938         82 IDVLVNNAGIT   92 (246)
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.25  E-value=0.13  Score=46.03  Aligned_cols=75  Identities=16%  Similarity=0.271  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hHH-HHHh----cCCC-ee--eeCCChHHHH----HHh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AKD-LVTS----LNPN-LV--IDYNEPEAMH----SIA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~~-~~~~----lg~~-~v--~~~~~~~~~~----~i~-~~~  252 (383)
                      ++++++|+||++++|..++..+...|++|+.+.+. + +.+ .+++    .+.. ..  .|..+.+-.+    .+. +.+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999888999999887643 2 221 2222    2322 12  3444433222    222 235


Q ss_pred             CccEEEEcCC
Q psy9949         253 PYDVILDAAG  262 (383)
Q Consensus       253 g~d~v~d~~g  262 (383)
                      .+|+++.++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            7999999986

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.24  E-value=0.13  Score=46.22  Aligned_cols=76  Identities=16%  Similarity=0.279  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g  253 (383)
                      ++++++|+||  ++++|.++++.+...|++|+.+.+.++ .+    +.++.+....  .|..+.+-.    +.+.+ .++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  669999999988889999988765432 22    2223343222  344443222    22222 367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999999975

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.24  E-value=0.13  Score=46.64  Aligned_cols=76  Identities=21%  Similarity=0.336  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~----~i~-~~~g~  254 (383)
                      .+++++|+||+|++|..++..+...|++|++++++.. . +...   +.+.. ..  .|..+.....    .+. ..+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999889999999886542 2 2222   22322 11  2444332222    222 23679


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (278)
T PRK08277         89 DILINGAGG   97 (278)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.23  E-value=0.21  Score=48.05  Aligned_cols=94  Identities=15%  Similarity=0.226  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+.+|+|.| +|++|.+++..+...|+ +++++.++. + ..++.+++...++.++  ++.+   ....+|+||.|++.+
T Consensus       180 ~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--~l~~---~l~~aDiVI~aT~a~  253 (414)
T PRK13940        180 SSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS--ELPQ---LIKKADIIIAAVNVL  253 (414)
T ss_pred             cCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH--HHHH---HhccCCEEEECcCCC
Confidence            678999999 89999999999999998 677777664 3 3466666522233221  1111   135699999999988


Q ss_pred             cccccccccccccCCCceEEEecCCC
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      .....  .+.+. ++.=.+++++.|.
T Consensus       254 ~~vi~--~~~~~-~~~~~~iDLavPR  276 (414)
T PRK13940        254 EYIVT--CKYVG-DKPRVFIDISIPQ  276 (414)
T ss_pred             CeeEC--HHHhC-CCCeEEEEeCCCC
Confidence            75443  22222 0112356666543

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.15  Score=45.56  Aligned_cols=76  Identities=25%  Similarity=0.395  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC--ee--eeCCChHHHHH-Hh----cCCCccEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN--LV--IDYNEPEAMHS-IA----GAGPYDVI  257 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~--~v--~~~~~~~~~~~-i~----~~~g~d~v  257 (383)
                      +++++|+||+|++|..++..+...|++|++++++. +. ++..++...  ..  .|..+.+.... +.    ..+++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            45899999999999999988888899999998654 32 233333211  11  34444332221 11    12579999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.+.|..
T Consensus        82 i~~ag~~   88 (257)
T PRK07074         82 VANAGAA   88 (257)
T ss_pred             EECCCCC
Confidence            9999853

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.22  E-value=0.12  Score=48.73  Aligned_cols=76  Identities=18%  Similarity=0.152  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhc--C--CCee-eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSL--N--PNLV-IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~l--g--~~~v-~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+++|||+||+|.+|..+++.+...|.+|++++++..  ......+  +  ...+ .|..+.....++.+..++|+||.+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            4689999999999999999999999999999885432  1121112  1  1111 244443333333333468999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      ++.
T Consensus        83 A~~   85 (349)
T TIGR02622        83 AAQ   85 (349)
T ss_pred             Ccc
Confidence            884

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.21  E-value=0.047  Score=48.04  Aligned_cols=73  Identities=22%  Similarity=0.268  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChH-HHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE-AMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+++++|+|++|++|..++..+...|++|+++.++......   +.-..+..+-.+ +.+.+...+++|+++.++|.
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~   77 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS---GNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI   77 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC---CcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence            56799999999999999999888889999998865322110   101122222112 22223334679999999884

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.14  Score=45.85  Aligned_cols=76  Identities=17%  Similarity=0.315  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHH---HhcCCC-ee--eeCCChHHHHHH----h-cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLV---TSLNPN-LV--IDYNEPEAMHSI----A-GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~---~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d  255 (383)
                      .+++++|+||+|++|..+++.+...|++|+.+.++++. +..   ...+.. ..  .|..+..-.+.+    . ..+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            56899999999999999999988899999999876532 222   222322 11  344443322222    1 235799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        85 ~vi~~ag~   92 (263)
T PRK08226         85 ILVNNAGV   92 (263)
T ss_pred             EEEECCCc
Confidence            99999985

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.11  Score=46.93  Aligned_cols=76  Identities=24%  Similarity=0.309  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCC-ee--eeCCChHHH----HHHh-cCCCccEEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPN-LV--IDYNEPEAM----HSIA-GAGPYDVIL  258 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~-~v--~~~~~~~~~----~~i~-~~~g~d~v~  258 (383)
                      +++++|+||+|++|..+++.+...|++|++++++.. .+ ....++.. ..  .|..+..-.    +.+. ..+++|.+|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999888888999999986643 32 22333321 11  244432222    2222 135799999


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      .++|..
T Consensus        83 ~~ag~~   88 (275)
T PRK08263         83 NNAGYG   88 (275)
T ss_pred             ECCCCc
Confidence            999864

>PRK09135 pteridine reductase; Provisional

Probab=95.16  E-value=0.15  Score=45.12  Aligned_cols=77  Identities=25%  Similarity=0.394  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HH-H---HHhcCCC--ee--eeCCChHHHHHH-hc----C
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KD-L---VTSLNPN--LV--IDYNEPEAMHSI-AG----A  251 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~-~---~~~lg~~--~v--~~~~~~~~~~~i-~~----~  251 (383)
                      ..+++++|+|++|.+|..++..+...|++|+++++.. + .+ .   +.+....  ..  .|..+.+-...+ .+    .
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999988888899999998642 2 22 1   1122111  11  244443322222 11    2


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++|.++|.
T Consensus        84 ~~~d~vi~~ag~   95 (249)
T PRK09135         84 GRLDALVNNASS   95 (249)
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.15  E-value=0.13  Score=46.54  Aligned_cols=76  Identities=24%  Similarity=0.332  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----H-HHHHhcCCCee--eeCCChH----HHHHHhc-CCC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----K-DLVTSLNPNLV--IDYNEPE----AMHSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~-~~~~~lg~~~v--~~~~~~~----~~~~i~~-~~g  253 (383)
                      .+++++|+||+  +++|+++++.+...|++|+.+.++++    . ++.++++....  .|..+..    +.+.+.+ .+.
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   88 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK   88 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            56899999986  79999999999889999988775432    1 22334453222  3444332    2223322 367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++++++|.
T Consensus        89 iD~lv~nAG~   98 (272)
T PRK08159         89 LDFVVHAIGF   98 (272)
T ss_pred             CcEEEECCcc
Confidence            9999999874

>PRK07023 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.12  Score=45.66  Aligned_cols=73  Identities=23%  Similarity=0.373  Sum_probs=47.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe---eeeCCChHHHHH-Hhc--------CCCccEEE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL---VIDYNEPEAMHS-IAG--------AGPYDVIL  258 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~---v~~~~~~~~~~~-i~~--------~~g~d~v~  258 (383)
                      +++|+||+|++|..+++.+...|++|++++++...+.....+...   ..|..+....+. +.+        ....|++|
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   82 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLI   82 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence            699999999999999998888899999988664433333333221   134444332222 111        13688999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      .++|.
T Consensus        83 ~~ag~   87 (243)
T PRK07023         83 NNAGT   87 (243)
T ss_pred             EcCcc
Confidence            98875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.08  E-value=0.17  Score=45.48  Aligned_cols=76  Identities=22%  Similarity=0.291  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCCe-e--eeCCChHHHH----HHhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPNL-V--IDYNEPEAMH----SIAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~~-v--~~~~~~~~~~----~i~~-~~g~  254 (383)
                      .+++++|+|+++++|..++..+...|++|+.+.++. +.+ .   .++.+... .  .|..+..-.+    .+.+ .+++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            568999999999999999888888999998888654 222 2   22334321 1  3444332222    2222 3579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.08  E-value=0.16  Score=45.36  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH----HhcCCC-ee--eeCCChHHH----HHHhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV----TSLNPN-LV--IDYNEPEAM----HSIAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~----~~lg~~-~v--~~~~~~~~~----~~i~~-~~g~  254 (383)
                      ++++++|+||+|++|..+++.+...|++|+.++++. +.+..    .+.+.. ..  .|..+.+-.    +.+.+ .+++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999998888999999998653 32222    222322 11  344443322    22222 3579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |.+|.++|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.12  Score=46.31  Aligned_cols=74  Identities=27%  Similarity=0.420  Sum_probs=48.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH-h----cCCCccE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI-A----GAGPYDV  256 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i-~----~~~g~d~  256 (383)
                      .+++|+||+|++|..+++.+...|++|++++++.. . +.   +...+.. .+  .|..+..-...+ .    ..+++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999899999999996642 2 22   2223332 11  244333222221 1    2357999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|.++|.
T Consensus        82 vi~~ag~   88 (263)
T PRK06181         82 LVNNAGI   88 (263)
T ss_pred             EEECCCc
Confidence            9999875

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.08  E-value=0.43  Score=39.32  Aligned_cols=94  Identities=21%  Similarity=0.174  Sum_probs=55.3

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+....+..|.. -++.   -+|++|+|.|.+.-+|.-+..++...|+.|+..-+..                  .++
T Consensus        16 ~PcTp~aii~lL~~-~~~~---l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T------------------~~l   73 (160)
T PF02882_consen   16 VPCTPLAIIELLEY-YGID---LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT------------------KNL   73 (160)
T ss_dssp             --HHHHHHHHHHHH-TT-S---TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS------------------SSH
T ss_pred             cCCCHHHHHHHHHh-cCCC---CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC------------------Ccc
Confidence            44444444444543 2321   4789999999888999999999999999888765431                  112


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+|+.++|.+....   .+.++  ++..++++|.
T Consensus        74 ~~~~---~~ADIVVsa~G~~~~i~---~~~ik--~gavVIDvG~  109 (160)
T PF02882_consen   74 QEIT---RRADIVVSAVGKPNLIK---ADWIK--PGAVVIDVGI  109 (160)
T ss_dssp             HHHH---TTSSEEEE-SSSTT-B----GGGS---TTEEEEE--C
T ss_pred             ccee---eeccEEeeeeccccccc---ccccc--CCcEEEecCC
Confidence            2222   24789999999877533   45778  8888888864

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.07  E-value=0.13  Score=46.40  Aligned_cols=76  Identities=21%  Similarity=0.302  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCchH-HHHH----hcCCCee--eeCCChHHHH----HHhc-CCC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDAK-DLVT----SLNPNLV--IDYNEPEAMH----SIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~----~lg~~~v--~~~~~~~~~~----~i~~-~~g  253 (383)
                      .+++++|+||++  ++|.++++.+...|++|+...++++. +.++    +.+....  .|..+.+-.+    .+.+ .+.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            578999999875  89999988888899999887765321 2222    2232222  3444433222    2222 357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus        85 iD~linnAg~   94 (262)
T PRK07984         85 FDGFVHSIGF   94 (262)
T ss_pred             CCEEEECCcc
Confidence            9999999984

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.07  E-value=0.12  Score=46.73  Aligned_cols=75  Identities=27%  Similarity=0.343  Sum_probs=49.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH-HhcCCC-ee--eeCCChHHHHH-H----hcCCCccEEEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV-TSLNPN-LV--IDYNEPEAMHS-I----AGAGPYDVILD  259 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~-~~lg~~-~v--~~~~~~~~~~~-i----~~~~g~d~v~d  259 (383)
                      +++||+||+|++|..+++.+...|++|++++++.. .+.+ ...+.. .+  .|..+...... +    ...+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999999999999999888888999999987643 3322 223321 11  34444332222 1    12367999999


Q ss_pred             cCCCC
Q psy9949         260 AAGIP  264 (383)
Q Consensus       260 ~~g~~  264 (383)
                      ++|..
T Consensus        83 ~ag~~   87 (276)
T PRK06482         83 NAGYG   87 (276)
T ss_pred             CCCCC
Confidence            98853

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.07  E-value=0.051  Score=48.91  Aligned_cols=74  Identities=27%  Similarity=0.337  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHH----HHh-cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMH----SIA-GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~----~i~-~~~g~d~v~d~~  261 (383)
                      .+++++|+|++|++|..+++.+...|++|+.++++....  ....... ..|..+..-.+    .+. ..+.+|++|.++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A   85 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG--QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA   85 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc--ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            568999999999999999999999999999988553221  0111111 13444432222    222 236799999998


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        86 g~   87 (266)
T PRK06171         86 GI   87 (266)
T ss_pred             cc
Confidence            85

>PRK07985 oxidoreductase; Provisional

Probab=95.06  E-value=0.08  Score=48.58  Aligned_cols=76  Identities=17%  Similarity=0.258  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc---hHH----HHHhcCCCe-e--eeCCChHHHH----HHh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD---AKD----LVTSLNPNL-V--IDYNEPEAMH----SIA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~---~~~----~~~~lg~~~-v--~~~~~~~~~~----~i~-~~~  252 (383)
                      ++++++|+||+|++|..+++.+...|++|+.+.++.   ..+    ...+.+... .  .|..+.+...    .+. ..+
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567999999999999999999998999998876432   222    122333221 1  3444433222    222 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|+++.++|.
T Consensus       128 ~id~lv~~Ag~  138 (294)
T PRK07985        128 GLDIMALVAGK  138 (294)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.03  E-value=0.15  Score=45.75  Aligned_cols=76  Identities=18%  Similarity=0.270  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCc----hHH-HHHhc-CCC-ee--eeCCChHH----HHHHhc-C
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGD----AKD-LVTSL-NPN-LV--IDYNEPEA----MHSIAG-A  251 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~----~~~-~~~~l-g~~-~v--~~~~~~~~----~~~i~~-~  251 (383)
                      .+++++|+||+  +++|.++++.+...|++|+.+.++.    +.+ ...++ +.. ..  .|..+.+-    .+.+.+ .
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            57899999986  7999999998888999999887532    222 33333 211 11  34444332    223322 3


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +.+|+++.++|.
T Consensus        86 g~ld~lv~nag~   97 (257)
T PRK08594         86 GVIHGVAHCIAF   97 (257)
T ss_pred             CCccEEEECccc
Confidence            679999999874

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.02  E-value=0.13  Score=48.18  Aligned_cols=74  Identities=18%  Similarity=0.174  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhc----------CCCee-eeCCChHHHHHHhcCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSL----------NPNLV-IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~l----------g~~~v-~~~~~~~~~~~i~~~~g~d  255 (383)
                      ++|||+||+|-+|..+++.+...|.+|+++++...   .+.+..+          +...+ .|..+.+....+.+..++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            47999999999999999999999999999985431   1111111          12211 2444433333333334689


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      +||.+++.
T Consensus        81 ~ViH~Aa~   88 (343)
T TIGR01472        81 EIYNLAAQ   88 (343)
T ss_pred             EEEECCcc
Confidence            99999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.02  E-value=0.17  Score=46.27  Aligned_cols=77  Identities=26%  Similarity=0.326  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc----------hH-HHHHh---cCCCe-e--eeCCChH----HH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD----------AK-DLVTS---LNPNL-V--IDYNEPE----AM  245 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~----------~~-~~~~~---lg~~~-v--~~~~~~~----~~  245 (383)
                      -++++++|+||++++|..+++.+...|++|+++++..          +. +.+.+   .+... .  .|..+.+    +.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            4678999999999999999988888999998887432          21 22222   23221 1  2444322    22


Q ss_pred             HHHh-cCCCccEEEEcCCC
Q psy9949         246 HSIA-GAGPYDVILDAAGI  263 (383)
Q Consensus       246 ~~i~-~~~g~d~v~d~~g~  263 (383)
                      +.+. ..+.+|++|.++|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence            2322 23679999999985

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.01  E-value=0.099  Score=49.00  Aligned_cols=76  Identities=16%  Similarity=0.181  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhc-------CC--Ce-eeeCCChHHHHHHhcCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSL-------NP--NL-VIDYNEPEAMHSIAGAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~l-------g~--~~-v~~~~~~~~~~~i~~~~g~  254 (383)
                      ++++|||+||+|.+|..+++.+...|.+|+++++...   .+.+..+       +.  .. ..|..+......+.+..++
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   84 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP   84 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999885421   1111111       11  11 1344443333333333368


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |+||.+++.
T Consensus        85 d~Vih~A~~   93 (340)
T PLN02653         85 DEVYNLAAQ   93 (340)
T ss_pred             CEEEECCcc
Confidence            999999875

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.00  E-value=0.27  Score=44.62  Aligned_cols=95  Identities=23%  Similarity=0.204  Sum_probs=63.8

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......+. ..++.   -.|++|+|.|.+.-+|.-++.++...|++|+...+..                  .++
T Consensus       138 ~PcTp~ai~~ll~-~~~i~---l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------~~l  195 (286)
T PRK14175        138 VPCTPLGIMEILK-HADID---LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------KDM  195 (286)
T ss_pred             CCCcHHHHHHHHH-HcCCC---CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------hhH
Confidence            4454444444444 22221   3789999999666699999999999999998877531                  122


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .+.+   ..+|+||.++|.+....   -+.++  ++..++++|.+
T Consensus       196 ~~~~---~~ADIVIsAvg~p~~i~---~~~vk--~gavVIDvGi~  232 (286)
T PRK14175        196 ASYL---KDADVIVSAVGKPGLVT---KDVVK--EGAVIIDVGNT  232 (286)
T ss_pred             HHHH---hhCCEEEECCCCCcccC---HHHcC--CCcEEEEcCCC
Confidence            2222   35899999999986533   34567  88788888653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.97  E-value=0.2  Score=44.71  Aligned_cols=76  Identities=20%  Similarity=0.291  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHH---HhcCCC-ee--eeCCChHHHH----HHhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLV---TSLNPN-LV--IDYNEPEAMH----SIAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~---~~lg~~-~v--~~~~~~~~~~----~i~~-~~g~  254 (383)
                      ++++++|+||+|++|..++..+...|++|+.+.++. +. +..   ++.+.. ..  .|..+.....    .+.. .+.+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            678999999999999999988888899999999764 22 222   233322 12  3444433222    2222 3578


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |.+|.++|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.96  E-value=0.18  Score=46.62  Aligned_cols=77  Identities=23%  Similarity=0.362  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-HHH---HhcCCCee---eeCCChHHHHHH----hcCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-DLV---TSLNPNLV---IDYNEPEAMHSI----AGAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~~~---~~lg~~~v---~~~~~~~~~~~i----~~~~g~  254 (383)
                      ++++++|+||++++|...+..+...|++|++.++..  .. +.+   +..|....   .|..+.+-.+++    .+.+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            578999999999999999988888899999887432  22 222   22343211   233333222222    224679


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        91 D~li~nAG~~  100 (306)
T PRK07792         91 DIVVNNAGIT  100 (306)
T ss_pred             CEEEECCCCC
Confidence            9999999863

>PLN02780 ketoreductase/ oxidoreductase

Probab=94.96  E-value=0.11  Score=48.44  Aligned_cols=76  Identities=18%  Similarity=0.297  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHh----cCCCe----eeeCCC--hHHHHHHhc-CC--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTS----LNPNL----VIDYNE--PEAMHSIAG-AG--  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~----lg~~~----v~~~~~--~~~~~~i~~-~~--  252 (383)
                      .|++++|+||++++|...+..+...|++|+.+++++ +.+ ...+    .+...    ..|..+  .+..+.+.+ .+  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            478999999999999998888888899999999764 322 2222    22111    134432  233333332 23  


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      .+|++++++|.
T Consensus       132 didilVnnAG~  142 (320)
T PLN02780        132 DVGVLINNVGV  142 (320)
T ss_pred             CccEEEEecCc
Confidence            46699999875

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.92  E-value=0.2  Score=44.60  Aligned_cols=76  Identities=25%  Similarity=0.354  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cCCC-ee--eeCCChHHHHH----Hhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LNPN-LV--IDYNEPEAMHS----IAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg~~-~v--~~~~~~~~~~~----i~~-~~g~  254 (383)
                      ++++++|+|++|++|..+++.+...|++|++++++.. . +...+   .+.. ..  .|..+......    +.+ .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999988888999999986542 2 22222   2322 11  34444332222    221 2579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.91  E-value=0.21  Score=44.58  Aligned_cols=76  Identities=17%  Similarity=0.304  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCC-ee--eeCCChHHHHH----Hhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPN-LV--IDYNEPEAMHS----IAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~-~v--~~~~~~~~~~~----i~~-~~g~  254 (383)
                      .+++++|+||++++|..++..+...|++|+.++++.+ .+ .   .++.+.. .+  .|..+.+...+    +.+ .+++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999988889999998886542 22 2   2223322 12  34444332222    222 3579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |+++.++|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.91  E-value=0.27  Score=43.35  Aligned_cols=76  Identities=28%  Similarity=0.426  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H-HH---HHhcCCCe-ee--eCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K-DL---VTSLNPNL-VI--DYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~-~~---~~~lg~~~-v~--~~~~~~~~~~----i~-~~~g  253 (383)
                      ++++++|+|++|++|..++..+...|++|+++.++..  . +.   .+..+... .+  |..+......    +. ...+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999988999877774432  1 11   22223221 22  4444332222    21 1357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|.+|.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999999885

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.90  E-value=0.15  Score=45.01  Aligned_cols=76  Identities=24%  Similarity=0.379  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-ee--eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      ++.+++|+||+|++|..++..+...|+.|+...++. +. +....++.. .+  .|..+.+-.+.+    . ..+++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            567999999999999999988888899888777543 33 233334422 12  233333222222    1 23579999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999885

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.90  E-value=0.17  Score=45.69  Aligned_cols=76  Identities=18%  Similarity=0.187  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cC--CC-eee--eCCChHHHHHH-h----cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LN--PN-LVI--DYNEPEAMHSI-A----GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg--~~-~v~--~~~~~~~~~~i-~----~~~  252 (383)
                      ++++++|+|++|++|..+++.+...|++|++++++.+ . +...+   .+  .. .++  |..+.+-...+ .    ..+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999986542 2 22222   11  11 122  43333222222 1    235


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus        86 ~~d~li~~ag~   96 (276)
T PRK05875         86 RLHGVVHCAGG   96 (276)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=94.90  E-value=0.081  Score=46.42  Aligned_cols=73  Identities=23%  Similarity=0.367  Sum_probs=51.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHH-HHH-hcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKD-LVT-SLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~-~~~-~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      |||+||+|-+|..++..+...|..|+++.+..+.. ... ......+ .|..+.+..+.+.+...+|.||.+++..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            79999999999999999999999999888655432 222 2232222 4555555555554445889999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.89  E-value=0.1  Score=51.57  Aligned_cols=72  Identities=17%  Similarity=0.230  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .++++|+|.| .|..|++++.+++..|++|++.+... +.+.++++|+.. +....  ..+.+   ..+|+||.+.|.+.
T Consensus        10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l---~~~D~VV~SpGi~~   82 (488)
T PRK03369         10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQI---ADYALVVTSPGFRP   82 (488)
T ss_pred             cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHh---hcCCEEEECCCCCC
Confidence            5788999999 89999999999999999999988443 334456677643 22211  11222   35799999999864

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.18  Score=44.43  Aligned_cols=36  Identities=31%  Similarity=0.408  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ++++++|+|++|++|..+++.+...|++|++++++.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~   40 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ   40 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence            567999999999999999998888999999998764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.87  E-value=0.16  Score=44.77  Aligned_cols=71  Identities=24%  Similarity=0.394  Sum_probs=50.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      |+|+||+|.+|..+++.+...+.+|.+.+|+.+.   ..++..|+..+ .|+++.+...  ....|+|.||.+++..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~--~al~g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLV--AALKGVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHH--HHHTTCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHH--HHHcCCceEEeecCcc
Confidence            7899999999999999999988899999987643   34456787544 2444322221  1236999999998843

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.86  E-value=0.19  Score=44.24  Aligned_cols=77  Identities=21%  Similarity=0.360  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHH---HhcCCC-ee--eeCCChH-HHHHHh----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLV---TSLNPN-LV--IDYNEPE-AMHSIA----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~---~~lg~~-~v--~~~~~~~-~~~~i~----~~~g~  254 (383)
                      .+.+++|.|++|++|..++..+...|++|++++++.. . +..   ...+.. .+  .|..+.+ +.+.+.    ..+++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            4678999999999999999988889999999987642 2 222   222322 11  2333332 222222    13579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        86 d~vi~~ag~~   95 (239)
T PRK07666         86 DILINNAGIS   95 (239)
T ss_pred             cEEEEcCccc
Confidence            9999998753

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.26  Score=44.60  Aligned_cols=77  Identities=23%  Similarity=0.357  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HH---HHhcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DL---VTSLNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~---~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      +.++++|+||+|++|..+++.+...|++|++++++. +. +.   ....+... .  .|..+......+.     ..+++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            456899999999999999998888899999888653 22 11   22234321 1  2433332222221     13578


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        89 d~vi~~Ag~~   98 (274)
T PRK07775         89 EVLVSGAGDT   98 (274)
T ss_pred             CEEEECCCcC
Confidence            9999999863

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.81  E-value=0.21  Score=44.43  Aligned_cols=73  Identities=27%  Similarity=0.386  Sum_probs=48.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCe-e--eeCCChHHHH----HHh-cCCCccEEEEc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNL-V--IDYNEPEAMH----SIA-GAGPYDVILDA  260 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~-v--~~~~~~~~~~----~i~-~~~g~d~v~d~  260 (383)
                      +++|+||+|++|..++..+...|++|++++++. +.+ ....++... .  .|..+.+-.+    .+. ..+++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            689999999999999999988999999998664 332 223344321 1  2444332222    222 23579999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            875

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.81  E-value=0.22  Score=44.45  Aligned_cols=75  Identities=15%  Similarity=0.217  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh----cCCC--ee--eeCCChHHHHH----Hh-cCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS----LNPN--LV--IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~----lg~~--~v--~~~~~~~~~~~----i~-~~~g  253 (383)
                      +++++|+||+|++|..++..+...|++|+.++++.. . +...+    .+..  ..  .|..+.....+    +. ..++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999988888999999986532 2 22221    2211  12  24444332222    22 1357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        82 id~vv~~ag~   91 (259)
T PRK12384         82 VDLLVYNAGI   91 (259)
T ss_pred             CCEEEECCCc
Confidence            9999999875

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.80  E-value=0.19  Score=46.53  Aligned_cols=75  Identities=23%  Similarity=0.377  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCch-H-HHHHhcCC--C--ee--eeCCChH----HHHHHhc-CCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDA-K-DLVTSLNP--N--LV--IDYNEPE----AMHSIAG-AGPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~-~-~~~~~lg~--~--~v--~~~~~~~----~~~~i~~-~~g~  254 (383)
                      +++++|+||++++|..++..+...| ++|+.++++++ . +...+++.  .  .+  .|..+.+    +.+.+.+ .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999988888889 89999986643 2 23333321  1  11  3444432    2233322 3579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999885

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.80  E-value=0.18  Score=46.76  Aligned_cols=71  Identities=23%  Similarity=0.259  Sum_probs=48.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|+|+||+|-+|..++..+...|.+|++++++.+ .......+...+ .|..+.+.....  ..++|+||.+++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a--l~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPS--FKGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHH--HCCCCEEEECCCC
Confidence            6999999999999999999888999999997643 333334454433 244443222211  2479999998764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.77  E-value=0.17  Score=44.93  Aligned_cols=77  Identities=21%  Similarity=0.287  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-H---HHHhcCCCe--e--eeCC---ChHH---HHHHhc-
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-D---LVTSLNPNL--V--IDYN---EPEA---MHSIAG-  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~---~~~~lg~~~--v--~~~~---~~~~---~~~i~~-  250 (383)
                      .++++++|+|++|++|..+++.+...|++|++++++. +. +   .+++.+...  +  .|..   ..++   .+.+.+ 
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            5788999999999999999988888899999998653 22 2   222333221  2  2322   1222   222222 


Q ss_pred             CCCccEEEEcCCC
Q psy9949         251 AGPYDVILDAAGI  263 (383)
Q Consensus       251 ~~g~d~v~d~~g~  263 (383)
                      .+.+|.+|.++|.
T Consensus        90 ~~~id~vi~~Ag~  102 (247)
T PRK08945         90 FGRLDGVLHNAGL  102 (247)
T ss_pred             hCCCCEEEECCcc
Confidence            2579999998875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.76  E-value=0.19  Score=45.11  Aligned_cols=76  Identities=21%  Similarity=0.297  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCc----hH-HHHHhcCCCee--eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSGD----AK-DLVTSLNPNLV--IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~~----~~-~~~~~lg~~~v--~~~~~~~~~----~~i~~-~~g  253 (383)
                      .+++++|+||  ++++|.++++.+...|++|+.+.+.+    +. ++..+++....  .|..+.+-.    +.+.+ .+.
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  57999999888888999998875332    11 22334443222  344443222    22222 367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++++++|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999999875

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.72  E-value=0.2  Score=45.45  Aligned_cols=75  Identities=29%  Similarity=0.449  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCC--C-ee--eeCCChHHHHHHh----cCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNP--N-LV--IDYNEPEAMHSIA----GAGPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~--~-~v--~~~~~~~~~~~i~----~~~g~  254 (383)
                      +++++|+||+|++|..++..+...|++|++++++. +.+ .   ....+.  . .+  .|..+....+.+.    ..+++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            56899999999999999998888899999998653 222 2   122221  1 11  3444433222232    23679


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |+++.++|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.72  E-value=0.23  Score=44.02  Aligned_cols=76  Identities=20%  Similarity=0.300  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-H-HH---HHhcCCCe-e--eeCCChHHHHH----Hhc-CCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-K-DL---VTSLNPNL-V--IDYNEPEAMHS----IAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~-~~---~~~lg~~~-v--~~~~~~~~~~~----i~~-~~g  253 (383)
                      ++++++|+||+|++|..++..+...|++|+... ++.. . +.   .++.+... .  .|..+......    +.+ .++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999887754 4432 1 22   22334321 1  24334332222    221 257


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=94.72  E-value=0.16  Score=45.07  Aligned_cols=73  Identities=26%  Similarity=0.362  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCC-ee--eeCCChHHHHHH----hc-CCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPN-LV--IDYNEPEAMHSI----AG-AGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~i----~~-~~g~d~v~d  259 (383)
                      +++++||+|++|++|..++..+...|++|++++++.    ....+.. ..  .|..+.+..+.+    .+ .+.+|++|.
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN   82 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            568999999999999999998888999999998664    1111211 11  244433222222    11 356999999


Q ss_pred             cCCCC
Q psy9949         260 AAGIP  264 (383)
Q Consensus       260 ~~g~~  264 (383)
                      ++|..
T Consensus        83 ~ag~~   87 (252)
T PRK08220         83 AAGIL   87 (252)
T ss_pred             CCCcC
Confidence            98863

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.23  Score=45.39  Aligned_cols=77  Identities=14%  Similarity=0.252  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-H-HH---HHhcCCCe-e--eeCCChHHHHHH----hc-CC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-K-DL---VTSLNPNL-V--IDYNEPEAMHSI----AG-AG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~-~~---~~~lg~~~-v--~~~~~~~~~~~i----~~-~~  252 (383)
                      -++.++||+||+|++|..++..+...|++|+.+.+++ + . ..   ++..+... +  .|..+.+..+.+    .+ .+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999988888899999888543 2 1 11   22223221 1  344443322222    11 35


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus       124 ~iD~lI~~Ag~  134 (290)
T PRK06701        124 RLDILVNNAAF  134 (290)
T ss_pred             CCCEEEECCcc
Confidence            79999999885

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.66  E-value=0.15  Score=52.30  Aligned_cols=74  Identities=16%  Similarity=0.275  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc----------------------hHHHHHhcCCCeeeeCCC---h
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD----------------------AKDLVTSLNPNLVIDYNE---P  242 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~----------------------~~~~~~~lg~~~v~~~~~---~  242 (383)
                      .+++|+|.| +|..|+.++..++..|.+|+++.+.+                      +.+.++++|.+..++...   .
T Consensus       309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            478999999 89999999999999999988887443                      234556778765544321   1


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCc
Q psy9949         243 EAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       243 ~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .+. .+  ..++|.||.++|...
T Consensus       388 ~~~-~l--~~~~DaV~latGa~~  407 (639)
T PRK12809        388 TFS-DL--TSEYDAVFIGVGTYG  407 (639)
T ss_pred             CHH-HH--HhcCCEEEEeCCCCC
Confidence            121 12  136999999999754

>PRK12937 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.3  Score=43.14  Aligned_cols=77  Identities=26%  Similarity=0.424  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H-HH---HHhcCCC-ee--eeCCChHHHHH-Hh----cCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K-DL---VTSLNPN-LV--IDYNEPEAMHS-IA----GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~-~~---~~~lg~~-~v--~~~~~~~~~~~-i~----~~~  252 (383)
                      .++++++|+|++|++|..++..+...|++++.+.++..  . +.   ....+.. ..  .|..+.+-.++ +.    ..+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999888775422  1 12   2223322 12  23333322222 22    235


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus        83 ~id~vi~~ag~   93 (245)
T PRK12937         83 RIDVLVNNAGV   93 (245)
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.64  E-value=0.17  Score=44.89  Aligned_cols=75  Identities=21%  Similarity=0.336  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hc--CCC-ee--eeCCChHHHH----HHh-cCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SL--NPN-LV--IDYNEPEAMH----SIA-GAGP  253 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~l--g~~-~v--~~~~~~~~~~----~i~-~~~g  253 (383)
                      +++++|+||+|++|..+++.+...|++|++++++. +.+ ...   +.  +.. .+  .|..+..-..    ++. ..++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999998888888899999888653 322 211   11  211 12  3444432222    222 2357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        82 id~vi~~ag~   91 (248)
T PRK08251         82 LDRVIVNAGI   91 (248)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK09134 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.33  Score=43.36  Aligned_cols=77  Identities=18%  Similarity=0.342  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHH-HHH---hcCCC-ee--eeCCChHHHH----HHhc-CC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIAG-AG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~~-~~  252 (383)
                      ..+++++|+||+|++|..++..+...|++|+++++.+  +.+ ...   ..+.. ..  .|..+..-..    ++.+ .+
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4577999999999999999988888999998877432  222 222   22332 11  2444432222    2221 35


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus        87 ~iD~vi~~ag~   97 (258)
T PRK09134         87 PITLLVNNASL   97 (258)
T ss_pred             CCCEEEECCcC
Confidence            79999999985

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=94.59  E-value=0.28  Score=46.32  Aligned_cols=78  Identities=21%  Similarity=0.244  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEecCc---h--------------HHHHHhcCCC-eee--eCCChHH
Q psy9949         187 PRDKRVLVLGASGGVGTM--AVQLLKAWDIEVVTTCSGD---A--------------KDLVTSLNPN-LVI--DYNEPEA  244 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~--ai~la~~~G~~Vi~~~~~~---~--------------~~~~~~lg~~-~v~--~~~~~~~  244 (383)
                      ..++++||+|+++++|++  +++.+ ..|++|+++....   +              .+.+++.|.. ..+  |..+..-
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            346899999999999999  55566 7899888887321   1              1234455643 222  3333222


Q ss_pred             ----HHHHhc-CCCccEEEEcCCCCc
Q psy9949         245 ----MHSIAG-AGPYDVILDAAGIPL  265 (383)
Q Consensus       245 ----~~~i~~-~~g~d~v~d~~g~~~  265 (383)
                          .+.+.+ .+++|+++.+++.+.
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCC
Confidence                223332 367999999998763

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.59  E-value=0.24  Score=44.64  Aligned_cols=74  Identities=18%  Similarity=0.250  Sum_probs=47.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCCe-e--eeCCChHHHHH----Hhc-CCCccEE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPNL-V--IDYNEPEAMHS----IAG-AGPYDVI  257 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~~-v--~~~~~~~~~~~----i~~-~~g~d~v  257 (383)
                      +++|+||+|++|..++..+...|++|++++++.. . +.   ++..+.+. +  .|..+....+.    +.. .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999888888999999986542 2 22   22233221 1  23333222222    221 2579999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.++|..
T Consensus        82 I~~ag~~   88 (270)
T PRK05650         82 VNNAGVA   88 (270)
T ss_pred             EECCCCC
Confidence            9999853

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.56  E-value=0.24  Score=43.87  Aligned_cols=77  Identities=23%  Similarity=0.299  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|.+|..++..+...|++|++++++.. . +.   +.+.+.. .+  .|..+.+-.+...     ..+.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5679999999999999999888888999999997632 2 12   2223322 12  2444432222221     12479


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        85 d~vi~~ag~~   94 (251)
T PRK12826         85 DILVANAGIF   94 (251)
T ss_pred             CEEEECCCCC
Confidence            9999998753

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=94.56  E-value=0.28  Score=43.42  Aligned_cols=76  Identities=22%  Similarity=0.361  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--chH-HH---HHhcCCCe-e--eeCCChHHHH----HHhc-CCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG--DAK-DL---VTSLNPNL-V--IDYNEPEAMH----SIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~--~~~-~~---~~~lg~~~-v--~~~~~~~~~~----~i~~-~~g  253 (383)
                      ++++++|+||+|++|..++..+...|++|+++.+.  ++. +.   +++.+... .  .|..+..-.+    .+.+ .+.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999888889998876632  222 22   22333221 1  2333332222    2222 256


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999999886

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=94.55  E-value=0.18  Score=45.34  Aligned_cols=74  Identities=22%  Similarity=0.271  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--chH-HHHHhc----CCC-ee--eeCCChH----HHHHH----h-c
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG--DAK-DLVTSL----NPN-LV--IDYNEPE----AMHSI----A-G  250 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~--~~~-~~~~~l----g~~-~v--~~~~~~~----~~~~i----~-~  250 (383)
                      .+++|+||++++|+.+++.+...|++|+++++.  ++. +.+.++    +.. ..  .|..+.+    ..+++    . .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            479999999999999999999999999988743  222 222332    211 11  2444322    11222    1 2


Q ss_pred             CCCccEEEEcCCC
Q psy9949         251 AGPYDVILDAAGI  263 (383)
Q Consensus       251 ~~g~d~v~d~~g~  263 (383)
                      .+++|++|.++|.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence            3579999999985

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.53  E-value=0.2  Score=44.68  Aligned_cols=74  Identities=26%  Similarity=0.327  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-H-HHHh-cCCCee-eeCCCh--HHHHHHhcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-D-LVTS-LNPNLV-IDYNEP--EAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~-~~~~-lg~~~v-~~~~~~--~~~~~i~~~~g~d~v~d~~  261 (383)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++.++.+. . .... .++..+ .|..+.  .+.+.+  ..++|+||.++
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~--~~~~d~vi~~~   93 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI--GDDSDAVICAT   93 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh--hcCCCEEEECC
Confidence            45789999999999999998888889999998866432 2 1111 122222 344431  222222  13799999988


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        94 g~   95 (251)
T PLN00141         94 GF   95 (251)
T ss_pred             CC
Confidence            75

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.52  E-value=0.037  Score=54.18  Aligned_cols=88  Identities=18%  Similarity=0.157  Sum_probs=55.0

Q ss_pred             CCCCEEE----EEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCC-eeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         187 PRDKRVL----VLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPN-LVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~Vl----I~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      ++++.++    |+||+|++|.+++|+++..|++|+++.+... ....+..+.+ .++|.+...+.+++....        
T Consensus        32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~--------  103 (450)
T PRK08261         32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY--------  103 (450)
T ss_pred             CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH--------
Confidence            7888888    8888999999999999999999999875533 2222223333 345544433333332110        


Q ss_pred             CCCCcccccccccccccCCCceEEEecCC
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                         ......  ++.+.  ++|+++.+++.
T Consensus       104 ---~~~~~~--l~~l~--~~griv~i~s~  125 (450)
T PRK08261        104 ---EFFHPV--LRSLA--PCGRVVVLGRP  125 (450)
T ss_pred             ---HHHHHH--HHhcc--CCCEEEEEccc
Confidence               001112  56667  78888888653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.51  E-value=0.33  Score=43.01  Aligned_cols=76  Identities=22%  Similarity=0.394  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHH-h---c-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSI-A---G-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i-~---~-~~g~  254 (383)
                      +++++||+||+|++|..+++.+...|++|+.++++.. . +.   .++.+.. .+  .|..+....+.+ .   + .+++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999889999999886542 2 11   2222322 12  233333322222 1   1 2579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        82 d~vi~~ag~   90 (250)
T TIGR03206        82 DVLVNNAGW   90 (250)
T ss_pred             CEEEECCCC
Confidence            999999984

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>KOG1208|consensus

Probab=94.48  E-value=0.24  Score=45.83  Aligned_cols=76  Identities=24%  Similarity=0.415  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh----cCCCee----eeCCCh----HHHHHHhc-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS----LNPNLV----IDYNEP----EAMHSIAG-AG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~----lg~~~v----~~~~~~----~~~~~i~~-~~  252 (383)
                      .+.+++|+|+++|+|..++..+...|++|+..+++.+ . +..++    .....+    .|-.+.    .|.+.+.. ..
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            5689999999999999999999999999999998853 2 22222    222222    243332    34444433 35


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      +.|+.++++|.
T Consensus       114 ~ldvLInNAGV  124 (314)
T KOG1208|consen  114 PLDVLINNAGV  124 (314)
T ss_pred             CccEEEeCccc
Confidence            79999998885

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.45  E-value=0.32  Score=38.43  Aligned_cols=90  Identities=19%  Similarity=0.316  Sum_probs=54.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC--CEEEEEecCchH----HHHHhcCCCeeeeCCChH---HHHHH--------------
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDAK----DLVTSLNPNLVIDYNEPE---AMHSI--------------  248 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~~----~~~~~lg~~~v~~~~~~~---~~~~i--------------  248 (383)
                      |.|+|++|.+|..++.+.+...  ++|++..-..+.    +.++++....+.-.+...   +.+.+              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            6799999999999999999886  589988833322    456778887776555432   22222              


Q ss_pred             -----hcCCCccEEEEcCCCCcccccccccccccCCCceEE
Q psy9949         249 -----AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFV  284 (383)
Q Consensus       249 -----~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v  284 (383)
                           .+...+|+++.+..+-...... +..++  .+-++.
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt-~~Ai~--~gk~ia  118 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPT-LAAIK--AGKDIA  118 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHH-HHHHH--TTSEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHH-HHHHH--CCCeEE
Confidence                 1124689999886665443322 55666  443443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.44  E-value=0.58  Score=37.66  Aligned_cols=76  Identities=21%  Similarity=0.206  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -+|++|+|+|.+..+|.-++.++...|++|+...+..+                  ++.+.+   ...|+|+-++|.+..
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~------------------~l~~~v---~~ADIVvsAtg~~~~   84 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI------------------QLQSKV---HDADVVVVGSPKPEK   84 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc------------------CHHHHH---hhCCEEEEecCCCCc
Confidence            37899999999999999999999999999988874321                  111111   358999999998854


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                       ..  -+.++  ++..++.++.
T Consensus        85 -i~--~~~ik--pGa~Vidvg~  101 (140)
T cd05212          85 -VP--TEWIK--PGATVINCSP  101 (140)
T ss_pred             -cC--HHHcC--CCCEEEEcCC
Confidence             33  56788  8888887753

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=94.41  E-value=0.14  Score=46.63  Aligned_cols=60  Identities=32%  Similarity=0.433  Sum_probs=41.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|+|+||+|.+|..++..+...|.+|+++++.             ..|..+.+....+.+...+|+||++++.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------QLDLTDPEALERLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence            48999999999999999999899999998864             1222232222222222357888888874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.38  E-value=0.46  Score=42.99  Aligned_cols=94  Identities=19%  Similarity=0.114  Sum_probs=63.8

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|. .-+++   -.|++|+|.|.+..+|.-++.++...|++|+..-+.                  ..++
T Consensus       137 ~PcTp~avi~lL~-~~~i~---l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~------------------t~~l  194 (285)
T PRK14191        137 VPATPMGVMRLLK-HYHIE---IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL------------------TKDL  194 (285)
T ss_pred             CCCcHHHHHHHHH-HhCCC---CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC------------------cHHH
Confidence            3455444444444 33331   279999999977799999999999999998765322                  1122


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+++-++|.+....   -+.++  ++..++++|-
T Consensus       195 ~~~~---~~ADIvV~AvG~p~~i~---~~~vk--~GavVIDvGi  230 (285)
T PRK14191        195 SFYT---QNADIVCVGVGKPDLIK---ASMVK--KGAVVVDIGI  230 (285)
T ss_pred             HHHH---HhCCEEEEecCCCCcCC---HHHcC--CCcEEEEeec
Confidence            2222   35899999999887633   45677  8888888864

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.38  E-value=0.65  Score=42.09  Aligned_cols=95  Identities=20%  Similarity=0.134  Sum_probs=64.5

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|. .-++.   -.|++|+|.|.+.-+|.-+..++...+++|+...+.                  ..++
T Consensus       138 ~PcTp~av~~lL~-~~~i~---l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~------------------t~~l  195 (284)
T PRK14190        138 LPCTPHGILELLK-EYNID---ISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK------------------TKNL  195 (284)
T ss_pred             CCCCHHHHHHHHH-HcCCC---CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC------------------chhH
Confidence            4544444444444 23331   379999999999999999999999999988865332                  1122


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .+.+   ...|+++-++|.+....   -+.++  ++..++++|-.
T Consensus       196 ~~~~---~~ADIvI~AvG~p~~i~---~~~ik--~gavVIDvGi~  232 (284)
T PRK14190        196 AELT---KQADILIVAVGKPKLIT---ADMVK--EGAVVIDVGVN  232 (284)
T ss_pred             HHHH---HhCCEEEEecCCCCcCC---HHHcC--CCCEEEEeecc
Confidence            2222   25899999999888533   45778  88888988643

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.35  E-value=0.21  Score=44.70  Aligned_cols=76  Identities=21%  Similarity=0.317  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HH-H---HHhcCCC-ee--eeCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KD-L---VTSLNPN-LV--IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~-~---~~~lg~~-~v--~~~~~~~~~~~----i~-~~~g  253 (383)
                      ++++++|+||+|++|..+++.+...|++|+.+.+++.  .+ .   ++..+.. ..  .|..+......    +. ..++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999999999999999999998888775431  11 1   2223322 11  34444332222    22 2357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|+++.++|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.34  E-value=0.35  Score=43.00  Aligned_cols=74  Identities=20%  Similarity=0.305  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H-HH---HHhcCCC-ee--eeCCChHH----HHHHhc-CCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K-DL---VTSLNPN-LV--IDYNEPEA----MHSIAG-AGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~-~~---~~~lg~~-~v--~~~~~~~~----~~~i~~-~~g~d  255 (383)
                      ++++|+|++|++|..++..+...|++|+++++...  . +.   .+..+.. .+  .|..+.+-    .+.+.+ .+.+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999889999999885432  1 11   2222321 12  34444332    222322 25799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99999875

>KOG1210|consensus

Probab=94.33  E-value=0.29  Score=44.44  Aligned_cols=78  Identities=21%  Similarity=0.317  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC----Cee----eeCCChHHHHHH-hcC----
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP----NLV----IDYNEPEAMHSI-AGA----  251 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~----~~v----~~~~~~~~~~~i-~~~----  251 (383)
                      ++..+++|.|++.++|++.+.-++..|++|..+.++.+ + +..+.++.    ..|    .|-.+.+-.+.+ .+.    
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE  110 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence            45579999999999999999999999999999997754 3 33344432    111    111111222222 222    


Q ss_pred             CCccEEEEcCCCC
Q psy9949         252 GPYDVILDAAGIP  264 (383)
Q Consensus       252 ~g~d~v~d~~g~~  264 (383)
                      +.+|.+|.|+|..
T Consensus       111 ~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  111 GPIDNLFCCAGVA  123 (331)
T ss_pred             CCcceEEEecCcc
Confidence            4689999999974

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=94.32  E-value=0.19  Score=43.69  Aligned_cols=96  Identities=23%  Similarity=0.152  Sum_probs=60.5

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCch-HH----HHHhcCCCee--eeCCChHHHHHHh
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMHSIA  249 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~~i~  249 (383)
                      ...+    +++++||-.|  +|.|..+..+++..+  .+|+++..+++ .+    .+++.|..++  +..+..   +...
T Consensus        71 ~l~~----~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~---~~~~  141 (212)
T PRK13942         71 LLDL----KEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT---LGYE  141 (212)
T ss_pred             HcCC----CCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc---cCCC
Confidence            4556    8999999998  456888888888765  48999986543 23    3334554333  222211   1111


Q ss_pred             cCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ..+.||+|+-......... .+.+.|+  ++|+++..
T Consensus       142 ~~~~fD~I~~~~~~~~~~~-~l~~~Lk--pgG~lvi~  175 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPK-PLIEQLK--DGGIMVIP  175 (212)
T ss_pred             cCCCcCEEEECCCcccchH-HHHHhhC--CCcEEEEE
Confidence            2357999886554444333 2478889  99999875

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.26  E-value=0.24  Score=44.43  Aligned_cols=76  Identities=25%  Similarity=0.323  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCc---h-HHHHHh----cCCCee--eeCCChHHH----HHHhc-
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGD---A-KDLVTS----LNPNLV--IDYNEPEAM----HSIAG-  250 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~---~-~~~~~~----lg~~~v--~~~~~~~~~----~~i~~-  250 (383)
                      .+++++|+||+  +++|.+++..+...|++|+.+.++.   + .+.+++    .+....  .|..+.+-.    +.+.+ 
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            57899999975  7999999998888999998876321   1 222222    121112  344443322    22222 


Q ss_pred             CCCccEEEEcCCC
Q psy9949         251 AGPYDVILDAAGI  263 (383)
Q Consensus       251 ~~g~d~v~d~~g~  263 (383)
                      .+.+|++|+++|.
T Consensus        85 ~g~iD~lv~nag~   97 (258)
T PRK07370         85 WGKLDILVHCLAF   97 (258)
T ss_pred             cCCCCEEEEcccc
Confidence            3679999999984

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=94.26  E-value=0.12  Score=46.93  Aligned_cols=73  Identities=25%  Similarity=0.342  Sum_probs=43.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchH--HHHHhc----CCCe--------eeeCCChHHHHHHhcCCCccE
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAK--DLVTSL----NPNL--------VIDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~--~~~~~l----g~~~--------v~~~~~~~~~~~i~~~~g~d~  256 (383)
                      |||+||+|.+|..+++.+...+. +++.+++++..  ++-+++    ....        +-|..+.....++.+..++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999988888887786 88988877642  233333    2211        125555555566666669999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      ||.++.-.
T Consensus        81 VfHaAA~K   88 (293)
T PF02719_consen   81 VFHAAALK   88 (293)
T ss_dssp             EEE-----
T ss_pred             EEEChhcC
Confidence            99998865

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.21  E-value=0.26  Score=44.75  Aligned_cols=72  Identities=18%  Similarity=0.257  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCCe----eeeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPNL----VIDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~~----v~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      .++++++|.| +||.+.+++..++..|+ +++++.|+. +. ++++.++...    .....+  ..    ....+|++|+
T Consensus       124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~--~~----~~~~~dliIN  196 (283)
T COG0169         124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD--LE----GLEEADLLIN  196 (283)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc--cc----cccccCEEEE
Confidence            4679999999 89999999999999997 788888764 43 4444444221    111111  00    0014899999


Q ss_pred             cCCCCc
Q psy9949         260 AAGIPL  265 (383)
Q Consensus       260 ~~g~~~  265 (383)
                      +++...
T Consensus       197 aTp~Gm  202 (283)
T COG0169         197 ATPVGM  202 (283)
T ss_pred             CCCCCC
Confidence            987543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=94.20  E-value=0.2  Score=47.71  Aligned_cols=75  Identities=15%  Similarity=0.162  Sum_probs=47.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHH-HhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLV-TSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ..+.+|+|+||+|-+|..++..+...|.+|+++++....... ..++...+ .|..+......+  ..++|+||.+++.
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~D~Vih~Aa~   95 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKV--TKGVDHVFNLAAD   95 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHH--HhCCCEEEEcccc
Confidence            356799999999999999999999999999999864321110 11121111 233322211111  2478999999853

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=94.19  E-value=0.23  Score=42.59  Aligned_cols=93  Identities=18%  Similarity=0.171  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc-hHHH----HHhcC-CCeeeeCCChHHHHHHhcC-CCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD-AKDL----VTSLN-PNLVIDYNEPEAMHSIAGA-GPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~-~~~~----~~~lg-~~~v~~~~~~~~~~~i~~~-~g~d~v  257 (383)
                      .++++|+-.| +|. |.+++.+++..+  .+|++++.++ ..+.    ++.++ .+++.... .+..+.+... ..+|.|
T Consensus        39 ~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~~~~l~~~~~~~D~V  115 (198)
T PRK00377         39 RKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEAPEILFTINEKFDRI  115 (198)
T ss_pred             CCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-echhhhHhhcCCCCCEE
Confidence            8899999999 666 999999998764  4899999553 3343    34566 33332111 1122222222 479999


Q ss_pred             EEcCCCCcc---cccccccccccCCCceEEE
Q psy9949         258 LDAAGIPLD---QINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       258 ~d~~g~~~~---~~~~~~~~l~~~~~G~~v~  285 (383)
                      |...+....   ... ..++++  ++|+++.
T Consensus       116 ~~~~~~~~~~~~l~~-~~~~Lk--pgG~lv~  143 (198)
T PRK00377        116 FIGGGSEKLKEIISA-SWEIIK--KGGRIVI  143 (198)
T ss_pred             EECCCcccHHHHHHH-HHHHcC--CCcEEEE
Confidence            986553221   222 256788  9999875

>PRK06101 short chain dehydrogenase; Provisional

Probab=94.18  E-value=0.3  Score=43.15  Aligned_cols=74  Identities=15%  Similarity=0.150  Sum_probs=46.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcC-CCee--eeCCChHHHHHH-hcC-CCccEEEEcCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLN-PNLV--IDYNEPEAMHSI-AGA-GPYDVILDAAGI  263 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg-~~~v--~~~~~~~~~~~i-~~~-~g~d~v~d~~g~  263 (383)
                      .+++|+||+|++|..++..+...|++|++++++++ .+.+.+.+ ....  .|..+.+-.+++ ... ...|.++.++|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~   81 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD   81 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence            47999999999999988888888999999987643 33332222 1111  354443333332 222 246777777763

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=94.17  E-value=0.2  Score=47.82  Aligned_cols=108  Identities=18%  Similarity=0.205  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHH
Q psy9949         168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMH  246 (383)
Q Consensus       168 ~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~  246 (383)
                      +....+..+.+...+    +++++||-.| + |.|..++.+++..|++|++++.+ +..+.+++.....-+.....++. 
T Consensus       151 Aq~~k~~~l~~~l~l----~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~-  223 (383)
T PRK11705        151 AQEAKLDLICRKLQL----KPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYR-  223 (383)
T ss_pred             HHHHHHHHHHHHhCC----CCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchh-
Confidence            334455555556667    8999999998 4 67888899999889999999944 45565554321100111111111 


Q ss_pred             HHhcCCCccEEEEc-----CCCCc--ccccccccccccCCCceEEEe
Q psy9949         247 SIAGAGPYDVILDA-----AGIPL--DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       247 ~i~~~~g~d~v~d~-----~g~~~--~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .+  .+.+|.|+..     +|...  .....+.++|+  |+|.++..
T Consensus       224 ~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~Lk--pGG~lvl~  266 (383)
T PRK11705        224 DL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLK--PDGLFLLH  266 (383)
T ss_pred             hc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcC--CCcEEEEE
Confidence            11  2468988753     23221  11111256889  99999874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.13  E-value=0.9  Score=39.93  Aligned_cols=91  Identities=16%  Similarity=0.246  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEecC-----ch--------HHHHHhcCCCeeeeCCChHHHHHHhcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIE---VVTTCSG-----DA--------KDLVTSLNPNLVIDYNEPEAMHSIAGA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~---Vi~~~~~-----~~--------~~~~~~lg~~~v~~~~~~~~~~~i~~~  251 (383)
                      ++.+++|.| +|+.|..++..+...|++   ++.++++     ++        .++++.++... .+   .++.+.+   
T Consensus        24 ~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~l~~~l---   95 (226)
T cd05311          24 EEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GTLKEAL---   95 (226)
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CCHHHHH---
Confidence            568999999 899999999888888975   7777765     22        22344443211 11   1233333   


Q ss_pred             CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         252 GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       252 ~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .++|++|.+++...... ..++.+.  +...+..+.+|
T Consensus        96 ~~~dvlIgaT~~G~~~~-~~l~~m~--~~~ivf~lsnP  130 (226)
T cd05311          96 KGADVFIGVSRPGVVKK-EMIKKMA--KDPIVFALANP  130 (226)
T ss_pred             hcCCEEEeCCCCCCCCH-HHHHhhC--CCCEEEEeCCC
Confidence            35899999997332221 1256666  66555555444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.12  E-value=0.38  Score=42.66  Aligned_cols=76  Identities=21%  Similarity=0.299  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hH-HHHHhcCCC-ee--eeCCChHH-H---HHHhc-CCC-cc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AK-DLVTSLNPN-LV--IDYNEPEA-M---HSIAG-AGP-YD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~-~~~~~lg~~-~v--~~~~~~~~-~---~~i~~-~~g-~d  255 (383)
                      .+++++|+||+|++|..++..+...|++|+.+++. . +. +...+++.. .+  .|..+.+- .   +.+.+ .++ +|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            45789999999999999999888889999887643 2 22 233334322 11  24433222 2   22221 244 99


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        84 ~li~~ag~   91 (253)
T PRK08642         84 TVVNNALA   91 (253)
T ss_pred             EEEECCCc
Confidence            99999864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.09  E-value=0.27  Score=50.71  Aligned_cols=76  Identities=22%  Similarity=0.369  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHh----cCCCe--e--eeCCChHHHHHH-----hcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTS----LNPNL--V--IDYNEPEAMHSI-----AGAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~----lg~~~--v--~~~~~~~~~~~i-----~~~~  252 (383)
                      .++++||+||+|++|..+++.+...|++|++++++. +.+ ...+    .+...  .  .|..+.+-...+     ...+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999998888999999998653 222 1122    23211  1  344443322222     1236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus       493 ~iDilV~nAG~  503 (676)
T TIGR02632       493 GVDIVVNNAGI  503 (676)
T ss_pred             CCcEEEECCCC
Confidence            89999999985

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.08  E-value=0.4  Score=42.53  Aligned_cols=76  Identities=22%  Similarity=0.316  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-H---HHHhcCCC-ee--eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-D---LVTSLNPN-LV--IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~---~~~~lg~~-~v--~~~~~~~~~----~~i~~-~~g  253 (383)
                      .+.++||+||+|++|..+++-+...|++|+...++.  +. +   ..++.+.. ..  .|..+..-.    +++.+ .++
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999988888999988777432  21 1   22233332 12  344443322    22222 357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        85 ~d~vi~~ag~   94 (252)
T PRK06077         85 ADILVNNAGL   94 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.06  E-value=0.17  Score=49.82  Aligned_cols=75  Identities=19%  Similarity=0.354  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc----------------------hHHHHHhcCCCeeeeCCC-hH-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD----------------------AKDLVTSLNPNLVIDYNE-PE-  243 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~----------------------~~~~~~~lg~~~v~~~~~-~~-  243 (383)
                      .+++|+|.| +|..|+.++..++..|.+|+.....+                      ..+.++++|.+..++... .+ 
T Consensus       140 ~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       140 TGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            578999999 89999999999999999988876432                      234566788764443321 11 


Q ss_pred             HHHHHhcCCCccEEEEcCCCCc
Q psy9949         244 AMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       244 ~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      ..+.+.  .++|.||.++|...
T Consensus       219 ~~~~~~--~~~D~vilAtGa~~  238 (467)
T TIGR01318       219 SLDDLL--EDYDAVFLGVGTYR  238 (467)
T ss_pred             CHHHHH--hcCCEEEEEeCCCC
Confidence            111111  36999999999865

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.06  E-value=0.39  Score=43.53  Aligned_cols=76  Identities=18%  Similarity=0.144  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -.|++|+|.|.+.-+|.-++.++...|++|+...+.                  ..++.+.+   ...|+|+-++|.+..
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~------------------t~~l~~~~---~~ADIVV~avG~~~~  214 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK------------------TRDLAAHT---RQADIVVAAVGKRNV  214 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC------------------CCCHHHHh---hhCCEEEEcCCCcCc
Confidence            378999999987888999999999999999875332                  11222222   358999999998765


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..   -+.++  ++..++++|-
T Consensus       215 i~---~~~ik--~gavVIDVGi  231 (285)
T PRK14189        215 LT---ADMVK--PGATVIDVGM  231 (285)
T ss_pred             cC---HHHcC--CCCEEEEccc
Confidence            22   46788  8888888864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.05  E-value=0.31  Score=43.27  Aligned_cols=74  Identities=27%  Similarity=0.390  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHH-H---hcCCC-ee--eeCCChH-HHH---HHh-cCCCccE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV-T---SLNPN-LV--IDYNEPE-AMH---SIA-GAGPYDV  256 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~-~---~lg~~-~v--~~~~~~~-~~~---~i~-~~~g~d~  256 (383)
                      +++||+|++|++|..++..+...|++|++++++.. .+.+ .   ..+.. ..  .|..+.. +..   .+. ..+++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999888888999999997542 2222 2   22322 11  2444432 211   222 2357999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|.+++.
T Consensus        82 vi~~a~~   88 (255)
T TIGR01963        82 LVNNAGI   88 (255)
T ss_pred             EEECCCC
Confidence            9998875

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.34  Score=42.81  Aligned_cols=74  Identities=15%  Similarity=0.212  Sum_probs=46.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cCCCe--e--eeCCChHHHHHH-hcC-CCccEEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LNPNL--V--IDYNEPEAMHSI-AGA-GPYDVIL  258 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg~~~--v--~~~~~~~~~~~i-~~~-~g~d~v~  258 (383)
                      ++++|+||+|++|..+++.+...|++|+++++++. . +...+   .+...  +  .|..+..-.+++ .+. ..+|+++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            47999999999999999988888999999986643 2 22222   12112  2  233333222222 221 3579999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      .++|.
T Consensus        82 ~~ag~   86 (243)
T PRK07102         82 IAVGT   86 (243)
T ss_pred             ECCcC
Confidence            98875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=94.01  E-value=0.27  Score=45.68  Aligned_cols=75  Identities=17%  Similarity=0.162  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCC---Ceee--eCCChHHHHHHhcCCCccE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNP---NLVI--DYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~---~~v~--~~~~~~~~~~i~~~~g~d~  256 (383)
                      ..++++||+||+|.+|..++..+...|++|++++++. +.. .   ....+.   ..++  |..+.+..+.+.  .++|+
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~   80 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--DGCET   80 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--cCCCE
Confidence            4578999999999999999999988999998887443 221 1   111111   1122  333332222222  36899


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      ||.++|.
T Consensus        81 vih~A~~   87 (325)
T PLN02989         81 VFHTASP   87 (325)
T ss_pred             EEEeCCC
Confidence            9999884

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=94.01  E-value=0.26  Score=43.39  Aligned_cols=74  Identities=30%  Similarity=0.465  Sum_probs=47.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-H-HHHHh---cCCC-ee--eeCCChHHHH----HHhc-CCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-K-DLVTS---LNPN-LV--IDYNEPEAMH----SIAG-AGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~-~~~~~---lg~~-~v--~~~~~~~~~~----~i~~-~~g~d  255 (383)
                      ++++|+|++|++|..++..+...|++|+++.+ +.. . +...+   .+.. ..  .|..+....+    .+.+ .+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            47899999999999999999999999998886 322 1 12222   2211 11  3444432222    2222 35799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        81 ~vi~~ag~   88 (242)
T TIGR01829        81 VLVNNAGI   88 (242)
T ss_pred             EEEECCCC
Confidence            99999985

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PLN02240 UDP-glucose 4-epimerase

Probab=93.93  E-value=0.34  Score=45.48  Aligned_cols=76  Identities=24%  Similarity=0.343  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-----HHHHHh----cC--CCee-eeCCChHHHHHHhcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-----KDLVTS----LN--PNLV-IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-----~~~~~~----lg--~~~v-~~~~~~~~~~~i~~~~g~d  255 (383)
                      .+++|+|+||+|.+|..+++.+...|.+|+++++..+     ......    .+  +..+ .|..+......+.+..++|
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            4678999999999999999988888999999874321     111111    11  2211 3444443333333334799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      +||++++.
T Consensus        84 ~vih~a~~   91 (352)
T PLN02240         84 AVIHFAGL   91 (352)
T ss_pred             EEEEcccc
Confidence            99999874

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=93.89  E-value=0.17  Score=47.94  Aligned_cols=91  Identities=22%  Similarity=0.294  Sum_probs=57.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHHHhcC---CC-eeeeCCCh-HHHHHHhcCCCccEEEEcCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLVTSLN---PN-LVIDYNEP-EAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~~~lg---~~-~v~~~~~~-~~~~~i~~~~g~d~v~d~~g  262 (383)
                      .+|||.| +|++|+.+++.+...| .+|++.+++ ++.+.+....   .. ..+|..+. .+.+-|   .++|+||++.+
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li---~~~d~VIn~~p   77 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALI---KDFDLVINAAP   77 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHH---hcCCEEEEeCC
Confidence            4699999 6999999999988888 699999977 4555443332   21 23555543 233333   35699999998


Q ss_pred             CCcccccccccccccCCCceEEEec
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ....... +-.|++  .+=.++++.
T Consensus        78 ~~~~~~i-~ka~i~--~gv~yvDts   99 (389)
T COG1748          78 PFVDLTI-LKACIK--TGVDYVDTS   99 (389)
T ss_pred             chhhHHH-HHHHHH--hCCCEEEcc
Confidence            7654433 124444  444555553

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=93.89  E-value=0.18  Score=46.48  Aligned_cols=72  Identities=14%  Similarity=0.238  Sum_probs=46.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhc--CCCccEEEEcCCC
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAG--AGPYDVILDAAGI  263 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~--~~g~d~v~d~~g~  263 (383)
                      |||+||+|-+|..++..+...|. .|+++.+..+......++...+ -+.++.+..+.+.+  ..++|+|+.+++.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~   76 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGAC   76 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccc
Confidence            68999999999999999999998 7887765433222222222112 23333444444443  2589999999874

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=93.87  E-value=0.61  Score=42.68  Aligned_cols=35  Identities=23%  Similarity=0.270  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~  223 (383)
                      ++++++|+| +|++|.+++..+...|+ +|+++.++.
T Consensus       125 ~~k~vlI~G-AGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIG-AGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            578999999 58999999888888999 588888763

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=93.87  E-value=0.29  Score=45.44  Aligned_cols=37  Identities=32%  Similarity=0.250  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ..+++|+|+||+|.+|..++..+...|.+|++++++.
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDL   39 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCC
Confidence            3578999999999999999998888899999888653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=93.86  E-value=0.32  Score=42.89  Aligned_cols=75  Identities=28%  Similarity=0.427  Sum_probs=48.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhcC---CC-ee--eeCCChHHHH----HHh-cCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSLN---PN-LV--IDYNEPEAMH----SIA-GAGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~lg---~~-~v--~~~~~~~~~~----~i~-~~~g~d  255 (383)
                      ++++|+|++|++|..+++.+...|++|+.++++..   .+......   .. .+  .|..+.+-.+    .+. ..+.+|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999999888888999999986632   12222221   11 12  2444433222    222 235799


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      ++|.++|..
T Consensus        83 ~vi~~ag~~   91 (245)
T PRK12824         83 ILVNNAGIT   91 (245)
T ss_pred             EEEECCCCC
Confidence            999999853

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=93.86  E-value=0.4  Score=43.64  Aligned_cols=90  Identities=18%  Similarity=0.304  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+++++|+| +|++|.+++..+...|+ +|+++.++. +. +++..++....+... .+..   .....+|+||+|+...
T Consensus       122 ~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~~~~---~~~~~~DivInaTp~g  196 (278)
T PRK00258        122 KGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-LELQ---EELADFDLIINATSAG  196 (278)
T ss_pred             CCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-ccch---hccccCCEEEECCcCC
Confidence            567899999 79999999999999995 888888764 33 344444421101110 0111   1124699999998765


Q ss_pred             ccc------ccccccccccCCCceEEEe
Q psy9949         265 LDQ------INSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       265 ~~~------~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...      ..  ..++.  +...++++
T Consensus       197 ~~~~~~~~~~~--~~~l~--~~~~v~Di  220 (278)
T PRK00258        197 MSGELPLPPLP--LSLLR--PGTIVYDM  220 (278)
T ss_pred             CCCCCCCCCCC--HHHcC--CCCEEEEe
Confidence            321      11  34566  66666665

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=93.84  E-value=0.28  Score=42.39  Aligned_cols=92  Identities=18%  Similarity=0.119  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCch-HHH----HHhcCCC---eeeeCCChHHHHHHhcCCCccE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDA-KDL----VTSLNPN---LVIDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~-~~~----~~~lg~~---~v~~~~~~~~~~~i~~~~g~d~  256 (383)
                      +++++||-.|  .|.|..++.+++..+  .+|++++.+++ .+.    +...+..   .++..+.   .+.+.....||.
T Consensus        71 ~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~---~~~~~~~~~fD~  145 (205)
T PRK13944         71 RPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG---KRGLEKHAPFDA  145 (205)
T ss_pred             CCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc---ccCCccCCCccE
Confidence            7889999998  456888888888764  58999996543 232    3344432   2232221   111112357999


Q ss_pred             EEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       257 v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      |+-+......... +.+.++  ++|+++..
T Consensus       146 Ii~~~~~~~~~~~-l~~~L~--~gG~lvi~  172 (205)
T PRK13944        146 IIVTAAASTIPSA-LVRQLK--DGGVLVIP  172 (205)
T ss_pred             EEEccCcchhhHH-HHHhcC--cCcEEEEE
Confidence            9877654444333 378899  99999764

>PRK05599 hypothetical protein; Provisional

Probab=93.83  E-value=0.36  Score=42.90  Aligned_cols=72  Identities=22%  Similarity=0.312  Sum_probs=45.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCC--ee--eeCCChH----HHHHHhc-CCCccE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPN--LV--IDYNEPE----AMHSIAG-AGPYDV  256 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~--~v--~~~~~~~----~~~~i~~-~~g~d~  256 (383)
                      +++|+||++++|.+++..+. .|++|+.+.+++ +.+ .   +++.+.+  ..  .|..+.+    +.+++.+ .+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999998877665 589999988654 322 2   2233432  12  2444432    2233333 357999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      ++.++|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9998885

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=93.82  E-value=0.48  Score=43.70  Aligned_cols=31  Identities=29%  Similarity=0.453  Sum_probs=29.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEE
Q psy9949         188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVT  218 (383)
Q Consensus       188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~  218 (383)
                      .|+++||+|+  ++++|.++++.+...|++|+.
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~   40 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV   40 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            6889999998  699999999999999999988

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.82  E-value=0.48  Score=41.31  Aligned_cols=34  Identities=24%  Similarity=0.158  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .+.+|+|.| .|.+|..+++++...|++++++++.
T Consensus        22 ~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~   55 (217)
T cd05211          22 EGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDP   55 (217)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcC
Confidence            678999999 9999999999999999988887743

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK07578 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.38  Score=41.09  Aligned_cols=63  Identities=30%  Similarity=0.497  Sum_probs=43.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChH-HHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE-AMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +++|+|++|++|..++..+... ++|+++.++..         ....|..+.+ ..+.+...+++|++|.++|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------DVQVDITDPASIRALFEKVGKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------ceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence            6899999999999887777666 89998886532         1123444433 22333334679999999885

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=93.79  E-value=0.098  Score=47.84  Aligned_cols=60  Identities=33%  Similarity=0.493  Sum_probs=37.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|||+|++|.+|.++...++..|.+|+++.+.             -+|..+.+....+.+...+|+||+|++.
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-------------DLDLTDPEAVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence            69999999999999999999988899998654             1222332222233233358888888865

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=93.79  E-value=0.27  Score=44.85  Aligned_cols=74  Identities=16%  Similarity=0.153  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCC-eeeeCCChHHHHHHh-cCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPN-LVIDYNEPEAMHSIA-GAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~-~v~~~~~~~~~~~i~-~~~g~d~v~d~~g  262 (383)
                      ++++++|.| +|+.+.+++..+..+|+ +|+++.|+. +. +++..++.. .+.....   .+.+. ....+|+||+|++
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~~~~~~~~~~~DiVInaTp  199 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---DSGGLAIEKAAEVLVSTVP  199 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---hhhhhhcccCCCEEEECCC
Confidence            578899999 89999999999999998 788887764 32 455555421 1111111   01111 1246899999987


Q ss_pred             CCc
Q psy9949         263 IPL  265 (383)
Q Consensus       263 ~~~  265 (383)
                      ...
T Consensus       200 ~g~  202 (282)
T TIGR01809       200 ADV  202 (282)
T ss_pred             CCC
Confidence            643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=93.78  E-value=0.4  Score=45.16  Aligned_cols=75  Identities=21%  Similarity=0.251  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc--CCC-eee--eCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL--NPN-LVI--DYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l--g~~-~v~--~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++.. . .+...+  +.. .++  |..+......+.  .++|+||.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~Vih   85 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAV--KGCDGVFH   85 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHH--cCCCEEEE
Confidence            56779999999999999999999889999999886532 2 222222  111 122  333322222221  36899999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      +++.
T Consensus        86 ~A~~   89 (353)
T PLN02896         86 VAAS   89 (353)
T ss_pred             CCcc
Confidence            8874

>PRK05855 short chain dehydrogenase; Validated

Probab=93.76  E-value=0.35  Score=48.72  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HH---HhcCCC-ee--eeCCChHHHHHH----hc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LV---TSLNPN-LV--IDYNEPEAMHSI----AG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~---~~lg~~-~v--~~~~~~~~~~~i----~~-~~g~  254 (383)
                      .+.+++|+||+|++|..+++.+...|++|+.++++.. .+ ..   ++.|.. .+  .|..+..-.+++    .+ .+.+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4578999999999999999888889999999886642 22 22   233432 11  344443322222    22 3579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus       394 d~lv~~Ag~~  403 (582)
T PRK05855        394 DIVVNNAGIG  403 (582)
T ss_pred             cEEEECCccC
Confidence            9999999863

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=93.74  E-value=0.57  Score=42.80  Aligned_cols=75  Identities=17%  Similarity=0.261  Sum_probs=44.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc----h-HHHHHhcCCC--eeeeCCChHHHHHHh-cCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD----A-KDLVTSLNPN--LVIDYNEPEAMHSIA-GAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~----~-~~~~~~lg~~--~v~~~~~~~~~~~i~-~~~g~d~v~  258 (383)
                      .+++++|.| +|+.+.+++..+...|+ +++++.++.    + ++++++++..  ..+.....+-.+.+. ....+|+|+
T Consensus       123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI  201 (288)
T PRK12749        123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT  201 (288)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence            567999999 78889887777777898 788888763    2 2344444321  001111110011121 124689999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +|+.-
T Consensus       202 NaTp~  206 (288)
T PRK12749        202 NGTKV  206 (288)
T ss_pred             ECCCC
Confidence            98854

>PRK12746 short chain dehydrogenase; Provisional

Probab=93.73  E-value=0.53  Score=41.86  Aligned_cols=35  Identities=29%  Similarity=0.248  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~  222 (383)
                      .+.+++|+|++|++|..+++.+...|++|++.. ++
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~   40 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRN   40 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            457999999999999999998888899887754 44

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=93.72  E-value=0.52  Score=43.03  Aligned_cols=69  Identities=19%  Similarity=0.232  Sum_probs=45.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcC----CCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLN----PNLVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg----~~~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+++|+|.| +|++|.+++..+...|+ +|+++.++. +. +++++++    ...+....  +..+.   ...+|+||+|
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~--~~~~~---~~~aDiVIna  199 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS--DLAAA---LAAADGLVHA  199 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc--chHhh---hCCCCEEEEC
Confidence            567899999 89999999999999998 788887664 32 3444432    11222221  11111   2468999999


Q ss_pred             CC
Q psy9949         261 AG  262 (383)
Q Consensus       261 ~g  262 (383)
                      +.
T Consensus       200 Tp  201 (284)
T PRK12549        200 TP  201 (284)
T ss_pred             Cc
Confidence            64

>TIGR02415 23BDH acetoin reductases

Probab=93.71  E-value=0.47  Score=42.15  Aligned_cols=74  Identities=22%  Similarity=0.360  Sum_probs=48.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHH---HhcCCC-ee--eeCCChHHHHH----Hh-cCCCccE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLV---TSLNPN-LV--IDYNEPEAMHS----IA-GAGPYDV  256 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~---~~lg~~-~v--~~~~~~~~~~~----i~-~~~g~d~  256 (383)
                      ++++|+|++|++|..+++.+...|++|+.+.++++ . +..   ++.+.. ..  .|..+......    +. ..+.+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999988889999999986542 2 222   233322 11  24444332222    21 2357899


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|.++|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9999985

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=93.70  E-value=0.42  Score=46.95  Aligned_cols=78  Identities=18%  Similarity=0.296  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchH------HHHHhcCCCee----eeCCChHHHHHHhcCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAK------DLVTSLNPNLV----IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~------~~~~~lg~~~v----~~~~~~~~~~~i~~~~g~d  255 (383)
                      -.|++|+|+||+|++|...+.-....+. +++...++|..      ++-..++....    -|..+.+-.+.+.+..++|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            3589999999999999866544444466 77777777632      33334442222    3555655566666666799


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      +||.++.-.
T Consensus       328 ~VfHAAA~K  336 (588)
T COG1086         328 IVFHAAALK  336 (588)
T ss_pred             eEEEhhhhc
Confidence            999988764

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=93.60  E-value=0.26  Score=45.57  Aligned_cols=73  Identities=22%  Similarity=0.291  Sum_probs=46.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhc----CCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSL----NPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~l----g~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|+|+||+|.+|..+++.+...|.+|+++.+..+  .+.+...    +...+ .|..+.+....+.+..++|+|++++|.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            4899999999999999998888999988764321  1222111    11111 244443333333333579999999975

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK12744 short chain dehydrogenase; Provisional

Probab=93.59  E-value=0.51  Score=42.11  Aligned_cols=76  Identities=18%  Similarity=0.310  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cc-h---H-HHH---HhcCCC-ee--eeCCChHHHHHH----h-c
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GD-A---K-DLV---TSLNPN-LV--IDYNEPEAMHSI----A-G  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~-~---~-~~~---~~lg~~-~v--~~~~~~~~~~~i----~-~  250 (383)
                      .+++++|+|++|++|..+++.+...|++|+.+++ .+ .   . +..   ...+.. ..  .|..+..-..++    . .
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            5679999999999999999999888998777652 21 1   1 122   223332 11  344443222222    1 2


Q ss_pred             CCCccEEEEcCCC
Q psy9949         251 AGPYDVILDAAGI  263 (383)
Q Consensus       251 ~~g~d~v~d~~g~  263 (383)
                      .+++|++|.++|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            3579999999985

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.58  E-value=0.62  Score=42.47  Aligned_cols=72  Identities=15%  Similarity=0.248  Sum_probs=44.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhc----CCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSL----NPNLVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~l----g~~~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+++++|.| +||.+.+++..+...|+ +++++.++. + +++++.+    +...+......++...   ...+|+|+++
T Consensus       126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~---~~~~divINa  201 (283)
T PRK14027        126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDV---IAAADGVVNA  201 (283)
T ss_pred             CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHH---HhhcCEEEEc
Confidence            568999999 89999999888888998 777777664 3 2344443    2211211111111111   1358999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +..
T Consensus       202 Tp~  204 (283)
T PRK14027        202 TPM  204 (283)
T ss_pred             CCC
Confidence            864

>PRK12827 short chain dehydrogenase; Provisional

Probab=93.56  E-value=0.53  Score=41.56  Aligned_cols=77  Identities=26%  Similarity=0.384  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----c-hHH-H---HHhcCCC-ee--eeCCChHHHHHHh----c-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----D-AKD-L---VTSLNPN-LV--IDYNEPEAMHSIA----G-  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----~-~~~-~---~~~lg~~-~v--~~~~~~~~~~~i~----~-  250 (383)
                      ++.+++|+||+|++|..++..+...|++|+.+++.    . ..+ .   ....+.. .+  .|..+.+..+.+.    + 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999998888899998887632    1 111 1   1222322 12  2444433222221    1 


Q ss_pred             CCCccEEEEcCCCC
Q psy9949         251 AGPYDVILDAAGIP  264 (383)
Q Consensus       251 ~~g~d~v~d~~g~~  264 (383)
                      .+++|.+|.++|..
T Consensus        85 ~~~~d~vi~~ag~~   98 (249)
T PRK12827         85 FGRLDILVNNAGIA   98 (249)
T ss_pred             hCCCCEEEECCCCC
Confidence            35799999999853

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=93.54  E-value=0.55  Score=42.50  Aligned_cols=66  Identities=18%  Similarity=0.305  Sum_probs=45.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCch-H-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDA-K-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~-~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ..+++++|.| +||.+.+++..++..|+ +|+++.++.+ . ++++.++..    +.     +.+ ....+|+|++|+..
T Consensus       120 ~~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~~-----~~~-~~~~~dlvINaTp~  188 (272)
T PRK12550        120 PPDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----WR-----PDL-GGIEADILVNVTPI  188 (272)
T ss_pred             CCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----ch-----hhc-ccccCCEEEECCcc
Confidence            4456899999 89999999999999998 6888887643 2 345555421    10     111 12358999999863

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=93.50  E-value=0.43  Score=44.42  Aligned_cols=74  Identities=15%  Similarity=0.258  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCch-H-HHHHhcCCC--ee--eeCCChHHHHHHhcCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDA-K-DLVTSLNPN--LV--IDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~-~-~~~~~lg~~--~v--~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      .+++|||+||+|.+|..+++.+...|  .+|++++++.. . +....+...  .+  .|..+.....++  ..++|+||.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~--~~~iD~Vih   80 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRA--LRGVDYVVH   80 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHH--HhcCCEEEE
Confidence            46899999999999999888777665  58888875532 2 222233211  12  244443322222  236999999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      ++|.
T Consensus        81 ~Ag~   84 (324)
T TIGR03589        81 AAAL   84 (324)
T ss_pred             Cccc
Confidence            9875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.41  E-value=0.31  Score=45.57  Aligned_cols=74  Identities=19%  Similarity=0.273  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHH---HHhc---CCCeee--eCCChHHHHHHhcCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDL---VTSL---NPNLVI--DYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~---~~~l---g~~~v~--~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .+.+|+|+||+|-+|..++..+...|++|++++++. ....   ...+   +.-.++  |..+......+  ..++|+||
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~vi   85 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAP--IAGCDLVF   85 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHH--HhcCCEEE
Confidence            468899999999999999999988999998887543 2211   1111   211222  33333222222  23689999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      .+++.
T Consensus        86 h~A~~   90 (338)
T PLN00198         86 HVATP   90 (338)
T ss_pred             EeCCC
Confidence            99873

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=93.41  E-value=0.29  Score=45.00  Aligned_cols=73  Identities=19%  Similarity=0.188  Sum_probs=44.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc---hHHHHHhcC---CCee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD---AKDLVTSLN---PNLV--IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~---~~~~~~~lg---~~~v--~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      +|+|+||+|.+|..+++.+...|  .+|+++.+..   +.+.+.++.   ...+  .|..+.+....+.+...+|+||++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            48999999999999999777666  6888876421   222222221   1112  244443333333333359999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      ++.
T Consensus        81 a~~   83 (317)
T TIGR01181        81 AAE   83 (317)
T ss_pred             ccc
Confidence            975

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.41  E-value=0.73  Score=40.53  Aligned_cols=76  Identities=26%  Similarity=0.395  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HH-HH---HhcCCC-ee--eeCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KD-LV---TSLNPN-LV--IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~-~~---~~lg~~-~v--~~~~~~~~~~~----i~-~~~g  253 (383)
                      +.+++||+||+|++|..++..+...|.+|+++.+...  .+ ..   ...+.. .+  .|..+.+....    +. ..++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            4568999999999999999999999999877764432  11 11   222322 11  34444332222    11 1257


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|.+|.++|.
T Consensus        85 id~vi~~ag~   94 (249)
T PRK12825         85 IDILVNNAGI   94 (249)
T ss_pred             CCEEEECCcc
Confidence            9999999984

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=93.39  E-value=0.29  Score=43.00  Aligned_cols=73  Identities=21%  Similarity=0.351  Sum_probs=44.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhc-CCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAG-AGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~-~~g~d~v~d~~g~~  264 (383)
                      +++|+||+|++|..+++.+...|  ..++...++...+. ..-....+ .|..+.+..+++.+ .+++|++|+++|..
T Consensus         2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~   78 (235)
T PRK09009          2 NILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDF-QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML   78 (235)
T ss_pred             EEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcccc-ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence            68999999999998887776654  56666555432221 11011111 34444443333433 46899999999864

>PRK11579 putative oxidoreductase; Provisional

Probab=93.35  E-value=2.4  Score=39.86  Aligned_cols=138  Identities=15%  Similarity=0.108  Sum_probs=75.8

Q ss_pred             CEEEEEcCCchHHH-HHHHH-HHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         190 KRVLVLGASGGVGT-MAVQL-LKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       190 ~~VlI~ga~g~vG~-~ai~l-a~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      -+|.|.| .|.+|. ..+.. .+.-+++++++++........+++...+  +.  ++. .+.+...+|+|+.|+....-.
T Consensus         5 irvgiiG-~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~--~~--~~~-ell~~~~vD~V~I~tp~~~H~   78 (346)
T PRK11579          5 IRVGLIG-YGYASKTFHAPLIAGTPGLELAAVSSSDATKVKADWPTVTV--VS--EPQ-HLFNDPNIDLIVIPTPNDTHF   78 (346)
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHHhhCCCCce--eC--CHH-HHhcCCCCCEEEEcCCcHHHH
Confidence            4799999 899986 34443 3444789999986544333334433222  22  233 333445799999998876543


Q ss_pred             ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER  347 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (383)
                      ..+ ..++.   .|+-|++..|...+.       .....-.....        -.|..+..++.......+..+.+++++
T Consensus        79 ~~~-~~al~---aGkhVl~EKPla~t~-------~ea~~l~~~a~--------~~g~~l~v~~~~R~~p~~~~~k~~i~~  139 (346)
T PRK11579         79 PLA-KAALE---AGKHVVVDKPFTVTL-------SQARELDALAK--------SAGRVLSVFHNRRWDSDFLTLKALLAE  139 (346)
T ss_pred             HHH-HHHHH---CCCeEEEeCCCCCCH-------HHHHHHHHHHH--------HhCCEEEEEeeccCCHHHHHHHHHHhc
Confidence            332 55555   456677765543321       11111111111        112222223333446778888999999


Q ss_pred             CCccc
Q psy9949         348 GQIKP  352 (383)
Q Consensus       348 g~l~~  352 (383)
                      |.|-.
T Consensus       140 g~iG~  144 (346)
T PRK11579        140 GVLGE  144 (346)
T ss_pred             CCCCC
Confidence            98743

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=93.33  E-value=0.11  Score=39.70  Aligned_cols=91  Identities=18%  Similarity=0.242  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecC-chHHHHHh----cC-CCee--eeCCChHHHHHHhcCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLK-AWDIEVVTTCSG-DAKDLVTS----LN-PNLV--IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~-~~G~~Vi~~~~~-~~~~~~~~----lg-~~~v--~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      |+.+||-.|  .+.|..++.+++ ..+++|++++-+ +..+.+++    .+ .+++  +..+   +........++|+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d---~~~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGD---AEFDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC---CHGGTTTSSCEEEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc---cccCcccCCCCCEEE
Confidence            578899998  456889999999 578899999954 43444332    22 2233  2222   211111234799999


Q ss_pred             EcC-CCCcc--c------ccccccccccCCCceEEE
Q psy9949         259 DAA-GIPLD--Q------INSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       259 d~~-g~~~~--~------~~~~~~~l~~~~~G~~v~  285 (383)
                      ... .....  .      ...+.+.++  |+|+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~--pgG~lvi  109 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLK--PGGRLVI  109 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEE--EEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcC--CCcEEEE
Confidence            877 32211  1      122366788  9999876

...

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.31  E-value=0.8  Score=43.72  Aligned_cols=72  Identities=21%  Similarity=0.428  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+.++||.| +|-+|..++..+...|. +|+..-+.. + .++++++|+. ++..++  ..+   ....+|+||-++|.+
T Consensus       177 ~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e--l~~---~l~~~DvVissTsa~  249 (414)
T COG0373         177 KDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE--LLE---ALAEADVVISSTSAP  249 (414)
T ss_pred             ccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH--HHH---hhhhCCEEEEecCCC
Confidence            678999999 89999999999999998 555555664 3 4678899954 332221  111   234699999999987


Q ss_pred             cc
Q psy9949         265 LD  266 (383)
Q Consensus       265 ~~  266 (383)
                      ..
T Consensus       250 ~~  251 (414)
T COG0373         250 HP  251 (414)
T ss_pred             cc
Confidence            54

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=93.25  E-value=0.3  Score=46.77  Aligned_cols=75  Identities=19%  Similarity=0.188  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCC-hHHHHHHhc
Q psy9949         188 RDKRVLVLGA----------------SGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE-PEAMHSIAG  250 (383)
Q Consensus       188 ~~~~VlI~ga----------------~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~i~~  250 (383)
                      +|++|+|+||                +|.+|.++++.+...|++|+.+.++...+.  ..+. ..++..+ .+..+.+.+
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~--~~~~-~~~dv~~~~~~~~~v~~  263 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT--PAGV-KRIDVESAQEMLDAVLA  263 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC--CCCc-EEEccCCHHHHHHHHHH
Confidence            6889999998                666999999999999999999986543211  1122 2344443 344444433


Q ss_pred             -CCCccEEEEcCCCCc
Q psy9949         251 -AGPYDVILDAAGIPL  265 (383)
Q Consensus       251 -~~g~d~v~d~~g~~~  265 (383)
                       .+.+|++|.+++...
T Consensus       264 ~~~~~DilI~~Aav~d  279 (399)
T PRK05579        264 ALPQADIFIMAAAVAD  279 (399)
T ss_pred             hcCCCCEEEEcccccc
Confidence             357999999988654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=93.24  E-value=0.8  Score=40.51  Aligned_cols=74  Identities=27%  Similarity=0.353  Sum_probs=46.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-HH-H---HHhcCCCe-e--eeCCChH-HH---HHHhc-CCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-KD-L---VTSLNPNL-V--IDYNEPE-AM---HSIAG-AGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~~-~---~~~lg~~~-v--~~~~~~~-~~---~~i~~-~~g~d  255 (383)
                      ++++|+||+|++|..+++.+...|++|+.+. ++.+ .+ .   ++..+... .  .|..+.. ..   +.+.+ .+++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999998888899888765 3322 21 1   22233221 1  2333322 22   22222 35799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        83 ~li~~ag~   90 (248)
T PRK06947         83 ALVNNAGI   90 (248)
T ss_pred             EEEECCcc
Confidence            99999984

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=93.22  E-value=0.26  Score=45.29  Aligned_cols=63  Identities=22%  Similarity=0.317  Sum_probs=42.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|||+||+|-+|..+++.+...| +|+++++....         ...|..+.....++.+..++|+||.+++.
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~---------~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTD---------YCGDFSNPEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEecccccc---------ccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            69999999999999999888888 78877753210         01233443333333333468999998764

>PRK06940 short chain dehydrogenase; Provisional

Probab=93.21  E-value=0.66  Score=42.03  Aligned_cols=74  Identities=19%  Similarity=0.337  Sum_probs=46.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCC-ee--eeCCChHHHH----HHhcCCCccE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPN-LV--IDYNEPEAMH----SIAGAGPYDV  256 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~-~v--~~~~~~~~~~----~i~~~~g~d~  256 (383)
                      +++++|.|+ |++|..++..+. .|++|+.+++++ +.+ ..+   ..+.. ..  .|..+.+-.+    .+.+.+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357899995 899999888875 799999998653 222 222   22322 11  3444433222    2223367999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|.++|..
T Consensus        80 li~nAG~~   87 (275)
T PRK06940         80 LVHTAGVS   87 (275)
T ss_pred             EEECCCcC
Confidence            99999853

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=93.21  E-value=0.35  Score=44.78  Aligned_cols=71  Identities=25%  Similarity=0.348  Sum_probs=47.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|+|+|++|.+|..+++.+...|.+|++++++.. .......+...+ .|..+.+....+  ..++|+||.+++.
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~--~~~~d~vi~~a~~   74 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKA--VAGCRALFHVAAD   74 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHH--HhCCCEEEEecee
Confidence            6999999999999999999888999999996543 222223343322 244443322221  2368999998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02214 cinnamoyl-CoA reductase

Probab=93.21  E-value=0.45  Score=44.71  Aligned_cols=75  Identities=23%  Similarity=0.300  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcC---CC-eee--eCCChHHHHHHhcCCCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLN---PN-LVI--DYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg---~~-~v~--~~~~~~~~~~i~~~~g~d~v  257 (383)
                      .++.+|+|+||+|.+|..++..+...|.+|++++++...   .....+.   .. .++  |..+.......  ..++|+|
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~V   85 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAA--IDGCDGV   85 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHH--HhcCCEE
Confidence            456789999999999999999998899999999865321   1122221   11 122  33332222221  2479999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.+++.
T Consensus        86 ih~A~~   91 (342)
T PLN02214         86 FHTASP   91 (342)
T ss_pred             EEecCC
Confidence            999874

>PRK08219 short chain dehydrogenase; Provisional

Probab=93.20  E-value=0.67  Score=40.25  Aligned_cols=74  Identities=24%  Similarity=0.381  Sum_probs=46.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHH-hcCCCee--eeCCChHHH-HHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVT-SLNPNLV--IDYNEPEAM-HSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~-~lg~~~v--~~~~~~~~~-~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++++|+||+|.+|..++..+... .+|++++++.. .+.+. ......+  .|..+.... +.+...+++|.+|.++|..
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   82 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVA   82 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            57999999999999888877766 89999997642 22222 2221122  244333222 2222334799999998863

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=93.19  E-value=0.66  Score=42.01  Aligned_cols=74  Identities=23%  Similarity=0.188  Sum_probs=53.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEe--cCchHHHHHhc-CCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTC--SGDAKDLVTSL-NPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~--~~~~~~~~~~l-g~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|=+|.-++..+...|.+|++++  ++-..+.+... +.-..-|-.+..+.+++.+...+|.|+.+++..
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~   78 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI   78 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence            699999999999888777777999999998  33334433332 222334666666777777777899999988864

>KOG1014|consensus

Probab=93.19  E-value=0.56  Score=42.53  Aligned_cols=77  Identities=16%  Similarity=0.318  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEecCc-hH-----HHHHhcCCC---eeeeCCChHH-HHHHhc-CC--
Q psy9949         187 PRDKRVLVLGASGGVGTMA-VQLLKAWDIEVVTTCSGD-AK-----DLVTSLNPN---LVIDYNEPEA-MHSIAG-AG--  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~a-i~la~~~G~~Vi~~~~~~-~~-----~~~~~lg~~---~v~~~~~~~~-~~~i~~-~~--  252 (383)
                      +.|++.+|+||+.++|.+- -+||+ .|.+|+.+.|+. ++     |+.++.++.   .++|+..++. .+.+++ ..  
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence            4578999999999999864 55555 899999999875 43     344445532   3367776552 333433 23  


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      .+-+.++++|..
T Consensus       126 ~VgILVNNvG~~  137 (312)
T KOG1014|consen  126 DVGILVNNVGMS  137 (312)
T ss_pred             ceEEEEeccccc
Confidence            466688988864

>KOG1209|consensus

Probab=93.15  E-value=0.75  Score=39.42  Aligned_cols=79  Identities=23%  Similarity=0.384  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEecC-chH-HHHHhcCCC-eeeeCCChH-H---HHHHhc--CCCccE
Q psy9949         187 PRDKRVLVLGA-SGGVGTMAVQLLKAWDIEVVTTCSG-DAK-DLVTSLNPN-LVIDYNEPE-A---MHSIAG--AGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga-~g~vG~~ai~la~~~G~~Vi~~~~~-~~~-~~~~~lg~~-~v~~~~~~~-~---~~~i~~--~~g~d~  256 (383)
                      ...+.|||.|. .||+|++++.-...-|+.|+++++. +.. .+..++|.. .-+|..+++ .   ...+++  .+..|+
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            45677888875 7899999888888889999999965 443 455567743 224444432 2   222333  357999


Q ss_pred             EEEcCCCCc
Q psy9949         257 ILDAAGIPL  265 (383)
Q Consensus       257 v~d~~g~~~  265 (383)
                      .++.+|-+.
T Consensus        85 L~NNAG~~C   93 (289)
T KOG1209|consen   85 LYNNAGQSC   93 (289)
T ss_pred             EEcCCCCCc
Confidence            999988753

>PRK14982 acyl-ACP reductase; Provisional

Probab=93.14  E-value=1.2  Score=41.49  Aligned_cols=90  Identities=21%  Similarity=0.296  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKA-WDI-EVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~-~G~-~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+++|+|+||+|.+|..+++.+.. .|. +++.+.+++ +. ++..+++...+.     ++.+.   ..+.|+|+.+++.
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~---l~~aDiVv~~ts~  225 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEA---LPEADIVVWVASM  225 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHH---HccCCEEEECCcC
Confidence            678999999889999998888864 565 788777654 33 334444422221     22222   2468999999987


Q ss_pred             Cccc-ccccccccccCCCceEEEecCC
Q psy9949         264 PLDQ-INSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       264 ~~~~-~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      +... ..  ...+.  +.-.+++++.|
T Consensus       226 ~~~~~I~--~~~l~--~~~~viDiAvP  248 (340)
T PRK14982        226 PKGVEID--PETLK--KPCLMIDGGYP  248 (340)
T ss_pred             CcCCcCC--HHHhC--CCeEEEEecCC
Confidence            5542 22  34455  67777777654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=93.09  E-value=1.4  Score=35.89  Aligned_cols=91  Identities=18%  Similarity=0.232  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCc-hH-HHHHhcCCCe-eeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGD-AK-DLVTSLNPNL-VIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~-~~-~~~~~lg~~~-v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ++.+++|.| +|++|...++.+...| .+|++..++. +. +++++++... .....  +..+.   ..++|+|+.|++.
T Consensus        18 ~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~Dvvi~~~~~   91 (155)
T cd01065          18 KGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL--DLEEL---LAEADLIINTTPV   91 (155)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec--chhhc---cccCCEEEeCcCC
Confidence            568899999 6999999998888886 5788887653 33 3455555421 01111  11111   3579999999987


Q ss_pred             Ccc---cccccccccccCCCceEEEe
Q psy9949         264 PLD---QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ~~~---~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...   ........++  ++..++++
T Consensus        92 ~~~~~~~~~~~~~~~~--~~~~v~D~  115 (155)
T cd01065          92 GMKPGDELPLPPSLLK--PGGVVYDV  115 (155)
T ss_pred             CCCCCCCCCCCHHHcC--CCCEEEEc
Confidence            653   1110023345  66666665

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=93.05  E-value=0.74  Score=40.57  Aligned_cols=74  Identities=23%  Similarity=0.358  Sum_probs=47.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-hH-HH---HHhcCCC-ee--eeCCChHHHHHH----h-cCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-AK-DL---VTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~~-~~---~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d  255 (383)
                      ++++|+||+|++|..++..+...|++|+++. ++. +. +.   .++.+.. .+  .|..+.+..+++    . ..+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            4799999999999999998888899988754 432 21 22   2233322 12  344443323222    1 236799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.01  E-value=0.52  Score=42.11  Aligned_cols=33  Identities=24%  Similarity=0.387  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEe
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTC  220 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~  220 (383)
                      ++++++|+||+  +++|..++..+...|++|+.++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            67899999987  4899999999999999998875

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.01  E-value=0.66  Score=41.36  Aligned_cols=35  Identities=34%  Similarity=0.405  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .+++++|+||+  |++|..++..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            45789999987  489999888888889999998854

>PRK07201 short chain dehydrogenase; Provisional

Probab=93.00  E-value=0.65  Score=47.79  Aligned_cols=75  Identities=24%  Similarity=0.326  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCC-ee--eeCCChHHHHH----Hh-cCCCcc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPN-LV--IDYNEPEAMHS----IA-GAGPYD  255 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~~----i~-~~~g~d  255 (383)
                      +++++|+||+|++|..++..+...|++|+++++++. . +...   ..+.. .+  .|..+..-.++    +. ..+++|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            678999999999999999888888999999996542 2 2222   22322 11  34444332222    22 235799


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|.++|.
T Consensus       451 ~li~~Ag~  458 (657)
T PRK07201        451 YLVNNAGR  458 (657)
T ss_pred             EEEECCCC
Confidence            99999985

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=92.99  E-value=0.86  Score=43.06  Aligned_cols=93  Identities=18%  Similarity=0.315  Sum_probs=59.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe-cCc--h-HHHHHhcCCCeeeeCCChH---HHHHH------------
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW--DIEVVTTC-SGD--A-KDLVTSLNPNLVIDYNEPE---AMHSI------------  248 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~-~~~--~-~~~~~~lg~~~v~~~~~~~---~~~~i------------  248 (383)
                      ++|.|.|++|++|..++.+.+..  .++|++++ +..  + .+.+++++...+.-.++..   +.+.+            
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            57999999999999999998865  46899988 332  2 2566788887765444321   11111            


Q ss_pred             -----hcCCCccEEEEcCCCCcccccccccccccCCCceEEE
Q psy9949         249 -----AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       249 -----~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~  285 (383)
                           .+...+|+|+.+.++....... +.+++  .+-++.+
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~pt-l~Ai~--aGK~VaL  120 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPT-LAAIR--AGKRIAL  120 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHH-HHHHH--CCCcEEE
Confidence                 1123589999998876443322 66666  5545544

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=92.99  E-value=1.1  Score=38.63  Aligned_cols=68  Identities=21%  Similarity=0.123  Sum_probs=44.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .|.+++|.| .|.+|..+++.+...|++|++.+++. +.+ +...+++. .++..      .+.. ..+|+++-|+.+.
T Consensus        27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~------~l~~-~~~Dv~vp~A~~~   96 (200)
T cd01075          27 EGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE------EIYS-VDADVFAPCALGG   96 (200)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch------hhcc-ccCCEEEeccccc
Confidence            678999999 89999999999999999999777553 333 33455643 22221      1111 1477777665443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02572 UDP-sulfoquinovose synthase

Probab=92.98  E-value=0.55  Score=45.81  Aligned_cols=33  Identities=27%  Similarity=0.366  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC  220 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~  220 (383)
                      ++++|||+||+|.+|..+++.+...|++|++++
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d   78 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVD   78 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe
Confidence            567899999999999999999998999999976

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=92.98  E-value=0.82  Score=41.36  Aligned_cols=90  Identities=17%  Similarity=0.178  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcC---CCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLN---PNLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg---~~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      ..+++++|.| +|++|.+++..+...|++|+++.++. + .++++.+.   .......     .+  .....+|+||+|+
T Consensus       115 ~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~--~~~~~~DivInat  186 (270)
T TIGR00507       115 RPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DE--LPLHRVDLIINAT  186 (270)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hh--hcccCccEEEECC
Confidence            4578999999 69999999888888899888887654 3 23444432   2122211     11  1124689999999


Q ss_pred             CCCcccc---ccc-ccccccCCCceEEEe
Q psy9949         262 GIPLDQI---NSY-LPFLKTGKFSKFVTL  286 (383)
Q Consensus       262 g~~~~~~---~~~-~~~l~~~~~G~~v~~  286 (383)
                      +......   ..+ ...++  ++..++++
T Consensus       187 p~gm~~~~~~~~~~~~~l~--~~~~v~D~  213 (270)
T TIGR00507       187 SAGMSGNIDEPPVPAEKLK--EGMVVYDM  213 (270)
T ss_pred             CCCCCCCCCCCCCCHHHcC--CCCEEEEe
Confidence            8642111   000 23455  66667766

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.98  E-value=0.81  Score=41.45  Aligned_cols=94  Identities=17%  Similarity=0.052  Sum_probs=64.5

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      .||+....+..|. ..++.   -.|++|+|.|.+.-+|.-+..++...|++|+..-+.                  ..++
T Consensus       139 ~PcTp~av~~ll~-~~~i~---l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~------------------T~~l  196 (285)
T PRK10792        139 RPCTPRGIMTLLE-RYGID---TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF------------------TKNL  196 (285)
T ss_pred             CCCCHHHHHHHHH-HcCCC---CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC------------------CCCH
Confidence            3455444444554 33331   268999999977779999999999999988777543                  1122


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ..+|++|.++|.+....   -+.++  ++..++++|-
T Consensus       197 ~~~~---~~ADIvi~avG~p~~v~---~~~vk--~gavVIDvGi  232 (285)
T PRK10792        197 RHHV---RNADLLVVAVGKPGFIP---GEWIK--PGAIVIDVGI  232 (285)
T ss_pred             HHHH---hhCCEEEEcCCCccccc---HHHcC--CCcEEEEccc
Confidence            2222   35899999999988633   45777  8888888863

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=92.97  E-value=0.3  Score=42.09  Aligned_cols=75  Identities=17%  Similarity=0.160  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+++|+|.| +|.+|...+..+...|++|+++......   +++.. +.- .+....  +.+  .+..++|+||-|++.+
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~--~~~--~~l~~adlViaaT~d~   81 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GKI-RWKQKE--FEP--SDIVDAFLVIAATNDP   81 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CCE-EEEecC--CCh--hhcCCceEEEEcCCCH
Confidence            678999999 7999999998888889999888744222   22222 211 111111  111  1124788999888887


Q ss_pred             ccccc
Q psy9949         265 LDQIN  269 (383)
Q Consensus       265 ~~~~~  269 (383)
                      .....
T Consensus        82 elN~~   86 (202)
T PRK06718         82 RVNEQ   86 (202)
T ss_pred             HHHHH
Confidence            65443

>PRK07069 short chain dehydrogenase; Validated

Probab=92.97  E-value=0.56  Score=41.52  Aligned_cols=73  Identities=19%  Similarity=0.352  Sum_probs=46.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hHH-HHHhc----CCCee----eeCCChHHHHH----Hhc-CCCcc
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AKD-LVTSL----NPNLV----IDYNEPEAMHS----IAG-AGPYD  255 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~~-~~~~l----g~~~v----~~~~~~~~~~~----i~~-~~g~d  255 (383)
                      ++|+||+|++|..+++.+...|++|+++.++ . +.+ ...++    +...+    .|..+..-.+.    +.+ .+++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999998888889999999865 3 222 22222    22111    24444332222    222 35799


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      ++|.++|..
T Consensus        82 ~vi~~ag~~   90 (251)
T PRK07069         82 VLVNNAGVG   90 (251)
T ss_pred             EEEECCCcC
Confidence            999998853

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.95  E-value=0.41  Score=42.20  Aligned_cols=77  Identities=27%  Similarity=0.438  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecCc-hH-HHHH---hcCCC-ee--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT-CSGD-AK-DLVT---SLNPN-LV--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~-~~~~-~~-~~~~---~lg~~-~v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..++..+...|++|+.+ .++. +. +...   ..+.. .+  .|..+..-...+.     +.++
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            35689999999999999988888889999888 6543 22 2222   22221 12  2444433222221     2357


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus        84 id~vi~~ag~~   94 (247)
T PRK05565         84 IDILVNNAGIS   94 (247)
T ss_pred             CCEEEECCCcC
Confidence            99999998853

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=92.89  E-value=0.61  Score=43.49  Aligned_cols=74  Identities=23%  Similarity=0.293  Sum_probs=47.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch-HH---HHHhcCCC--ee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA-KD---LVTSLNPN--LV--IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~-~~---~~~~lg~~--~v--~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|+|+||+|.+|..++..+...|.+|+++++. +. ..   .+.+++..  ..  .|..+......+....++|+||+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a   81 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHFA   81 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEECC
Confidence            58999999999999998888889999988643 21 11   12222211  12  3444444444433335799999998


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      +..
T Consensus        82 ~~~   84 (338)
T PRK10675         82 GLK   84 (338)
T ss_pred             ccc
Confidence            743

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=92.87  E-value=0.53  Score=44.30  Aligned_cols=47  Identities=26%  Similarity=0.278  Sum_probs=37.0

Q ss_pred             HHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         171 TAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       171 tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      |||.-|+....+     +..+|+|+||+|=+|..++..+...|.+|+++++.
T Consensus         2 ~~~~~~~~~~~~-----~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~   48 (348)
T PRK15181          2 TAYEELRTKLVL-----APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF   48 (348)
T ss_pred             chhhhhhhcccc-----cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            456555433332     55789999999999999999999889999999853

>PRK07041 short chain dehydrogenase; Provisional

Probab=92.82  E-value=0.5  Score=41.27  Aligned_cols=71  Identities=24%  Similarity=0.336  Sum_probs=46.6

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhc--CCC-ee--eeCCChHHH-HHHhcCCCccEEEEcCCC
Q psy9949         193 LVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSL--NPN-LV--IDYNEPEAM-HSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       193 lI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~l--g~~-~v--~~~~~~~~~-~~i~~~~g~d~v~d~~g~  263 (383)
                      +|+||+|++|..+++.+...|++|++++++. +.+ ....+  +.. .+  .|..+..-. +.+.+.+.+|.+|.++|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~   79 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            5899999999999988888999999998763 222 22222  221 22  344443322 333334678999999885

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=92.80  E-value=0.4  Score=49.37  Aligned_cols=74  Identities=18%  Similarity=0.342  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch----------------------HHHHHhcCCCeeeeCC---Ch
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA----------------------KDLVTSLNPNLVIDYN---EP  242 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~----------------------~~~~~~lg~~~v~~~~---~~  242 (383)
                      .+++|+|.| +|..|+.++..++..|.+|+++.+.+.                      .+.++++|.+...+..   +.
T Consensus       326 ~~~~VaIIG-aGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        326 SDKRVAIIG-AGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            578999999 899999999999999999888874321                      2344566754332221   11


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCc
Q psy9949         243 EAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       243 ~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .+ +.+  ..++|.||.++|...
T Consensus       405 ~~-~~~--~~~~DavilAtGa~~  424 (654)
T PRK12769        405 SL-ESL--LEDYDAVFVGVGTYR  424 (654)
T ss_pred             CH-HHH--HhcCCEEEEeCCCCC
Confidence            11 111  136999999999753

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=92.78  E-value=0.52  Score=41.02  Aligned_cols=92  Identities=23%  Similarity=0.150  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCch-HH----HHHhcCCCee--eeCCChHHHHHHhcCCCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      +++++||-.|  +|.|..++.+++..+.  +|+++..++. .+    .+++.|.+++  +..+.   .+.......||+|
T Consensus        76 ~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~---~~~~~~~~~fD~I  150 (215)
T TIGR00080        76 KPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG---TQGWEPLAPYDRI  150 (215)
T ss_pred             CCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc---ccCCcccCCCCEE
Confidence            8899999998  5568888888887654  6999985543 23    3345555433  22111   1111123479998


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEe
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +-.......... +.+.++  ++|+++..
T Consensus       151 i~~~~~~~~~~~-~~~~L~--~gG~lv~~  176 (215)
T TIGR00080       151 YVTAAGPKIPEA-LIDQLK--EGGILVMP  176 (215)
T ss_pred             EEcCCcccccHH-HHHhcC--cCcEEEEE
Confidence            865444433322 378889  99998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=92.78  E-value=0.25  Score=41.23  Aligned_cols=48  Identities=27%  Similarity=0.368  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCee
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLV  236 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v  236 (383)
                      +..+|+|.| +|.+|+.|+.+++.+|++|+..+.. ++.+.....+...+
T Consensus        19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i   67 (168)
T PF01262_consen   19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFI   67 (168)
T ss_dssp             -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEES
T ss_pred             CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceE
Confidence            346899999 9999999999999999999999854 44555566655433

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=92.77  E-value=0.4  Score=44.37  Aligned_cols=35  Identities=34%  Similarity=0.339  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .+.+|||+||+|-+|..++..+...|.+|++++++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~   37 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD   37 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence            46789999999999999999999999999988854

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=92.73  E-value=0.65  Score=41.16  Aligned_cols=78  Identities=23%  Similarity=0.371  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch--HHHH-HhcC-----CCee--eeCCC-hHH----HHHHhc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA--KDLV-TSLN-----PNLV--IDYNE-PEA----MHSIAG  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~--~~~~-~~lg-----~~~v--~~~~~-~~~----~~~i~~  250 (383)
                      ..+++++|+|+++++|.+++..+...|++|+++.+. +.  .+.+ ....     ....  .|..+ ...    .+++.+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            367899999999999999988888999998888744 22  2222 1111     1111  34443 222    222222


Q ss_pred             -CCCccEEEEcCCCC
Q psy9949         251 -AGPYDVILDAAGIP  264 (383)
Q Consensus       251 -~~g~d~v~d~~g~~  264 (383)
                       .+++|++++++|..
T Consensus        83 ~~g~id~lvnnAg~~   97 (251)
T COG1028          83 EFGRIDILVNNAGIA   97 (251)
T ss_pred             HcCCCCEEEECCCCC
Confidence             36799999999863

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=92.69  E-value=1.6  Score=39.60  Aligned_cols=71  Identities=20%  Similarity=0.290  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      ...+|+++| +|-+|.-.+.-++.+|.+|+++++=...-.-.-....+|+|--+.+....+-+...+|.++-
T Consensus        11 ~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~rekPd~IVp   81 (394)
T COG0027          11 QATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVEREKPDYIVP   81 (394)
T ss_pred             CCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhhhheeeeeccCHHHHHHHHHhhCCCeeee
Confidence            446799999 99999999999999999999999643321111111235777777776666666678898873

>PLN00016 RNA-binding protein; Provisional

Probab=92.69  E-value=0.48  Score=45.18  Aligned_cols=97  Identities=21%  Similarity=0.277  Sum_probs=58.5

Q ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEecCchH-HH-----------HHhcCCCeeeeCCChHHHHHHhcC
Q psy9949         188 RDKRVLVL----GASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DL-----------VTSLNPNLVIDYNEPEAMHSIAGA  251 (383)
Q Consensus       188 ~~~~VlI~----ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~-----------~~~lg~~~v~~~~~~~~~~~i~~~  251 (383)
                      ...+|||+    ||+|-+|..++..+...|.+|++++++... ..           +...+...+ ..+-.++.+.+ ..
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~~~-~~  128 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPADVKSKV-AG  128 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHHHHHhhh-cc
Confidence            34689999    999999999999888889999999965421 11           112233322 22222323222 34


Q ss_pred             CCccEEEEcCCCCcccccccccccccCCC--ceEEEecC
Q psy9949         252 GPYDVILDAAGIPLDQINSYLPFLKTGKF--SKFVTLRS  288 (383)
Q Consensus       252 ~g~d~v~d~~g~~~~~~~~~~~~l~~~~~--G~~v~~~~  288 (383)
                      .++|+||++.+........+++.+.  ..  .++|.+++
T Consensus       129 ~~~d~Vi~~~~~~~~~~~~ll~aa~--~~gvkr~V~~SS  165 (378)
T PLN00016        129 AGFDVVYDNNGKDLDEVEPVADWAK--SPGLKQFLFCSS  165 (378)
T ss_pred             CCccEEEeCCCCCHHHHHHHHHHHH--HcCCCEEEEEcc
Confidence            5899999998754321222244443  23  36777653

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=92.63  E-value=0.32  Score=43.92  Aligned_cols=58  Identities=29%  Similarity=0.496  Sum_probs=40.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +||+|+.|.+|..+.+++. -+.+|+++.+.+             +|-.+.+...++.....+|+||+|+.-
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------~Ditd~~~v~~~i~~~~PDvVIn~AAy   60 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-------------LDITDPDAVLEVIRETRPDVVINAAAY   60 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------ccccChHHHHHHHHhhCCCEEEECccc
Confidence            8999999999999888888 556999998664             233333333343334467888887664

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=92.61  E-value=0.34  Score=44.04  Aligned_cols=71  Identities=15%  Similarity=0.290  Sum_probs=47.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHH-HHHh---cCCC-ccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAM-HSIA---GAGP-YDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~-~~i~---~~~g-~d~v~d~~g~  263 (383)
                      +|+|+||+|.+|..+++.+...|.+|.+++++.+...  ..+... ..|+.+.+.. +.+.   ...| +|.+|-+.+.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~   77 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP   77 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence            4899999999999999999888999999997643211  123222 2466654433 3332   1246 8999887764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1502|consensus

Probab=92.61  E-value=0.75  Score=42.38  Aligned_cols=73  Identities=25%  Similarity=0.282  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH---HHHHhcCC-C---eee--eCCC-hHHHHHHhcCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK---DLVTSLNP-N---LVI--DYNE-PEAMHSIAGAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~---~~~~~lg~-~---~v~--~~~~-~~~~~~i~~~~g~d~  256 (383)
                      .+.+|.|+||+|=+|...+..+...|++|.+++|+. +.   +.++++.. .   .++  |-.+ ..|.+.+   .|+|.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai---~gcdg   81 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI---DGCDG   81 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH---hCCCE
Confidence            678999999999999999999999999999999664 22   34566542 1   122  2111 2233322   47999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      ||.++.-
T Consensus        82 VfH~Asp   88 (327)
T KOG1502|consen   82 VFHTASP   88 (327)
T ss_pred             EEEeCcc
Confidence            9987764

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=92.60  E-value=0.19  Score=45.77  Aligned_cols=67  Identities=18%  Similarity=0.174  Sum_probs=43.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      |||+||+|-+|..+++.+...|.+|++++++... ......+   +.+.......   ....++|+||.+++..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLAES---EALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccchh---hhcCCCCEEEECCCCC
Confidence            6899999999999999888889999999965432 2111111   1111111111   1235799999999853

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=92.59  E-value=0.21  Score=45.71  Aligned_cols=92  Identities=17%  Similarity=0.088  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHH----hcCCC-eeeeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVT----SLNPN-LVIDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~----~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      .++++||-.| +|. |.+++.+++ .|+ +|++++.+ ...+.++    ..+.. .+..... +...  ...++||+|+.
T Consensus       158 ~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~--~~~~~fDlVva  231 (288)
T TIGR00406       158 LKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQ--PIEGKADVIVA  231 (288)
T ss_pred             CCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-cccc--ccCCCceEEEE
Confidence            5788999998 665 888877776 466 89999954 3333332    22221 1111111 0110  01247999997


Q ss_pred             cCCCCcc--cccccccccccCCCceEEEe
Q psy9949         260 AAGIPLD--QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       260 ~~g~~~~--~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .......  ....+.++++  ++|.++..
T Consensus       232 n~~~~~l~~ll~~~~~~Lk--pgG~li~s  258 (288)
T TIGR00406       232 NILAEVIKELYPQFSRLVK--PGGWLILS  258 (288)
T ss_pred             ecCHHHHHHHHHHHHHHcC--CCcEEEEE
Confidence            6543321  1111257888  99999875

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PLN02928 oxidoreductase family protein

Probab=92.57  E-value=0.59  Score=43.95  Aligned_cols=94  Identities=17%  Similarity=0.257  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcC----C-Ceeee--CCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLN----P-NLVID--YNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg----~-~~v~~--~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .|+++.|.| .|.+|..+++.++.+|++|++..+..+.+....++    . ....+  ....++.+-+   ...|+|+.+
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell---~~aDiVvl~  233 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA---GEADIVVLC  233 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH---hhCCEEEEC
Confidence            578999999 99999999999999999999988652221111110    0 00000  0111223222   357998887


Q ss_pred             CCCCc----ccccccccccccCCCceEEEec
Q psy9949         261 AGIPL----DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       261 ~g~~~----~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      .....    ......++.|+  ++..+|.++
T Consensus       234 lPlt~~T~~li~~~~l~~Mk--~ga~lINva  262 (347)
T PLN02928        234 CTLTKETAGIVNDEFLSSMK--KGALLVNIA  262 (347)
T ss_pred             CCCChHhhcccCHHHHhcCC--CCeEEEECC
Confidence            76432    11122267788  888888774

>PLN02686 cinnamoyl-CoA reductase

Probab=92.55  E-value=0.51  Score=44.83  Aligned_cols=36  Identities=19%  Similarity=0.139  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      ..+++|||+||+|.+|..++..+...|++|++++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~   86 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDT   86 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCC
Confidence            567899999999999999999999999999887754

>PLN00015 protochlorophyllide reductase

Probab=92.55  E-value=0.54  Score=43.38  Aligned_cols=71  Identities=21%  Similarity=0.332  Sum_probs=46.4

Q ss_pred             EEEcCCchHHHHHHHHHHHCC-CEEEEEecCch-H-HHHHhcCC--Ce----eeeCCChHHH----HHHhc-CCCccEEE
Q psy9949         193 LVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDA-K-DLVTSLNP--NL----VIDYNEPEAM----HSIAG-AGPYDVIL  258 (383)
Q Consensus       193 lI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~-~-~~~~~lg~--~~----v~~~~~~~~~----~~i~~-~~g~d~v~  258 (383)
                      +|+||++++|..+++.+...| ++|+.+++++. . +.+.+++.  ..    ..|..+.+-.    +.+.+ .+++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999988888889 89999886643 2 23333321  11    1355443322    23322 25799999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +++|.
T Consensus        81 nnAG~   85 (308)
T PLN00015         81 CNAAV   85 (308)
T ss_pred             ECCCc
Confidence            99985

>PRK06123 short chain dehydrogenase; Provisional

Probab=92.49  E-value=1.2  Score=39.38  Aligned_cols=76  Identities=20%  Similarity=0.320  Sum_probs=47.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-hH-H---HHHhcCCCe-e--eeCCChH-HHH---HHhc-CCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-AK-D---LVTSLNPNL-V--IDYNEPE-AMH---SIAG-AGPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~~-~---~~~~lg~~~-v--~~~~~~~-~~~---~i~~-~~g~  254 (383)
                      +++++|+|++|++|..+++.+...|++|+... +++ +. +   .++..+... .  .|..+.. +.+   .+.+ .+.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            35899999999999999888888899887665 332 21 1   123334321 1  2444432 222   2221 3579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        82 d~li~~ag~~   91 (248)
T PRK06123         82 DALVNNAGIL   91 (248)
T ss_pred             CEEEECCCCC
Confidence            9999999853

>PRK13243 glyoxylate reductase; Reviewed

Probab=92.48  E-value=0.71  Score=43.18  Aligned_cols=88  Identities=13%  Similarity=0.185  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-  266 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++..+.......+..    +.  ++.+.+   ...|+|+-+...... 
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~----~~--~l~ell---~~aDiV~l~lP~t~~T  218 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAE----YR--PLEELL---RESDFVSLHVPLTKET  218 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCE----ec--CHHHHH---hhCCEEEEeCCCChHH
Confidence            578999999 8999999999999999999988865433333334432    11  122222   246888777764321 


Q ss_pred             ---cccccccccccCCCceEEEec
Q psy9949         267 ---QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ---~~~~~~~~l~~~~~G~~v~~~  287 (383)
                         .....++.++  ++..+|.++
T Consensus       219 ~~~i~~~~~~~mk--~ga~lIN~a  240 (333)
T PRK13243        219 YHMINEERLKLMK--PTAILVNTA  240 (333)
T ss_pred             hhccCHHHHhcCC--CCeEEEECc
Confidence               1111256666  777777663

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=92.45  E-value=0.42  Score=45.01  Aligned_cols=74  Identities=12%  Similarity=0.203  Sum_probs=44.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchH---HHHHhc--CCC-ee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAK---DLVTSL--NPN-LV--IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~---~~~~~l--g~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+|||+||+|.+|..+++.+...|.+++++. +.++.   ......  +.. ..  .|..+.+...++.+..++|+||.+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~   81 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL   81 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence            3799999999999999999999998655444 33221   111111  111 11  244443333333333469999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      ++.
T Consensus        82 A~~   84 (355)
T PRK10217         82 AAE   84 (355)
T ss_pred             Ccc
Confidence            875

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.44  E-value=1.1  Score=40.64  Aligned_cols=76  Identities=21%  Similarity=0.183  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -.|++|+|.|.+.-+|.=+..|+...|++|+..-+.                  ..++.+.+   ...|+++-++|.+..
T Consensus       154 l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~------------------T~~l~~~~---~~ADIvI~AvG~p~~  212 (282)
T PRK14169        154 VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK------------------TRNLKQLT---KEADILVVAVGVPHF  212 (282)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC------------------CCCHHHHH---hhCCEEEEccCCcCc
Confidence            378999999999999999999999889988765432                  11222222   247999999999886


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..   -+.++  ++..++++|-
T Consensus       213 i~---~~~vk--~GavVIDvGi  229 (282)
T PRK14169        213 IG---ADAVK--PGAVVIDVGI  229 (282)
T ss_pred             cC---HHHcC--CCcEEEEeec
Confidence            33   46778  8888888864

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.38  E-value=1.2  Score=40.39  Aligned_cols=94  Identities=16%  Similarity=0.103  Sum_probs=64.1

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      .||+.......|. .-+++   -.|++|+|.|.+.-+|.-++.++...|++|+...+..                  .++
T Consensus       144 ~PcTp~av~~ll~-~~~i~---l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T------------------~~l  201 (287)
T PRK14176        144 VPCTPHGVIRALE-EYGVD---IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT------------------DDL  201 (287)
T ss_pred             CCCcHHHHHHHHH-HcCCC---CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC------------------CCH
Confidence            4454444444444 22331   3799999999877799999999999999887766321                  112


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ..+|++|.++|.+... .  -+.++  ++..++++|.
T Consensus       202 ~~~~---~~ADIvv~AvG~p~~i-~--~~~vk--~gavVIDvGi  237 (287)
T PRK14176        202 KKYT---LDADILVVATGVKHLI-K--ADMVK--EGAVIFDVGI  237 (287)
T ss_pred             HHHH---hhCCEEEEccCCcccc-C--HHHcC--CCcEEEEecc
Confidence            2211   3589999999998754 3  56778  8888888864

>PLN02583 cinnamoyl-CoA reductase

Probab=92.32  E-value=1  Score=41.34  Aligned_cols=36  Identities=31%  Similarity=0.269  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .++++|+|+||+|.+|..++..+...|.+|++++++
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~   39 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK   39 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence            456789999999999999999999999999999864

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.31  E-value=1  Score=40.82  Aligned_cols=94  Identities=21%  Similarity=0.116  Sum_probs=63.8

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|. .-++.   -.|++|+|.|.+.-+|.=+..++...++.|+..-+.                  ..++
T Consensus       135 ~PcTp~avi~lL~-~~~i~---l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~------------------T~~l  192 (287)
T PRK14173        135 EPCTPAGVVRLLK-HYGIP---LAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK------------------TQDL  192 (287)
T ss_pred             CCCCHHHHHHHHH-HcCCC---CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence            3444443444444 33331   378999999999999999999999889988765432                  1122


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+++-++|.+... .  -+.++  ++..++++|-
T Consensus       193 ~~~~---~~ADIvIsAvGkp~~i-~--~~~vk--~GavVIDVGi  228 (287)
T PRK14173        193 PAVT---RRADVLVVAVGRPHLI-T--PEMVR--PGAVVVDVGI  228 (287)
T ss_pred             HHHH---hhCCEEEEecCCcCcc-C--HHHcC--CCCEEEEccC
Confidence            2222   2489999999988754 3  56778  8888888864

>KOG1610|consensus

Probab=92.24  E-value=4.9  Score=36.72  Aligned_cols=77  Identities=23%  Similarity=0.414  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH-Hhc--CC--CeeeeCCChHHHHH----Hh---cCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV-TSL--NP--NLVIDYNEPEAMHS----IA---GAGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~-~~l--g~--~~v~~~~~~~~~~~----i~---~~~g  253 (383)
                      -.++.|+|+|..+|.|..++.-+...|.+|++.|-. +..+.+ .+.  +-  +--+|...++....    ++   ...+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            456789999999999999999999999999999933 332222 222  11  11245444332222    22   2246


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      .-.+++++|.
T Consensus       107 LwglVNNAGi  116 (322)
T KOG1610|consen  107 LWGLVNNAGI  116 (322)
T ss_pred             ceeEEecccc
Confidence            8889999984

>PLN02427 UDP-apiose/xylose synthase

Probab=92.19  E-value=0.75  Score=43.95  Aligned_cols=74  Identities=14%  Similarity=0.170  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc-hHHHHHhcC-------CCee-eeCCChHHHHHHhcCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD-AKDLVTSLN-------PNLV-IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~-~~~~~~~lg-------~~~v-~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      +..+|||+||+|-+|..+++.+... |.+|+++++.. +...+...+       ...+ .|..+......+  ..++|+|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~--~~~~d~V   90 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGL--IKMADLT   90 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHH--hhcCCEE
Confidence            3457999999999999998888877 57999998543 322222221       1111 233332222222  2369999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.+++.
T Consensus        91 iHlAa~   96 (386)
T PLN02427         91 INLAAI   96 (386)
T ss_pred             EEcccc
Confidence            999873

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=92.13  E-value=1.6  Score=37.15  Aligned_cols=95  Identities=14%  Similarity=0.097  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC-CCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA-GPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~-~g~d~v~d~~g~  263 (383)
                      -.|++|+|.|.+.-+|.=+..++...||+|+....+.-..+.+.-...   ....  .+..+++.+. ...|+|+-++|.
T Consensus        60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~---hs~t~~~~~~~~l~~~~~~ADIVIsAvG~  136 (197)
T cd01079          60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIR---HEKHHVTDEEAMTLDCLSQSDVVITGVPS  136 (197)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccc---cccccccchhhHHHHHhhhCCEEEEccCC
Confidence            378999999999999999999999999999977533211111100000   0111  1211223322 469999999999


Q ss_pred             CcccccccccccccCCCceEEEecC
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +.....  -+.++  ++..+|++|.
T Consensus       137 ~~~~i~--~d~ik--~GavVIDVGi  157 (197)
T cd01079         137 PNYKVP--TELLK--DGAICINFAS  157 (197)
T ss_pred             CCCccC--HHHcC--CCcEEEEcCC
Confidence            886333  56888  9999999864

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=91.95  E-value=0.65  Score=47.98  Aligned_cols=77  Identities=19%  Similarity=0.178  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc---hHHHHHhc----CCCee-eeCCChHHHHHHhcCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD---AKDLVTSL----NPNLV-IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~---~~~~~~~l----g~~~v-~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      ++++|||+||+|-+|..++..+...  +.+|+++++..   +...+...    +...+ .|..+.+....+....++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            4679999999999999988888766  57898887532   22211111    12111 244444444444334589999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |++++..
T Consensus        85 iHlAa~~   91 (668)
T PLN02260         85 MHFAAQT   91 (668)
T ss_pred             EECCCcc
Confidence            9998853

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=91.95  E-value=0.54  Score=43.66  Aligned_cols=96  Identities=20%  Similarity=0.201  Sum_probs=57.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC----CEEEEEecCch---HHHHHhcCC--------------------CeeeeCCChH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD----IEVVTTCSGDA---KDLVTSLNP--------------------NLVIDYNEPE  243 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G----~~Vi~~~~~~~---~~~~~~lg~--------------------~~v~~~~~~~  243 (383)
                      +|.|.| .|.+|..+.+++...+    .+|.++..-..   ..++.++.-                    ..+--....+
T Consensus         1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            478999 6999999999988653    57777763221   223322210                    1110010001


Q ss_pred             HHHHHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCc
Q psy9949         244 AMHSIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFL  291 (383)
Q Consensus       244 ~~~~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~  291 (383)
                       .+.+.. ..++|+||+|+|.......+ ...++  .+++.|+++.|..
T Consensus        80 -p~~~~w~~~gvDiVie~tG~~~s~e~a-~~~l~--aGa~~V~~SaP~~  124 (325)
T TIGR01532        80 -PEALPWRALGVDLVLDCTGVYGNREQG-ERHIR--AGAKRVLFSHPGA  124 (325)
T ss_pred             -hhhccccccCCCEEEEccchhccHHHH-HHHHH--cCCeEEEecCCCc
Confidence             111111 14899999999988765553 66777  7888888876643

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=91.94  E-value=0.42  Score=37.38  Aligned_cols=89  Identities=25%  Similarity=0.264  Sum_probs=52.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch---HHHHHhcC----CCee-eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA---KDLVTSLN----PNLV-IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~---~~~~~~lg----~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|.|.||+|-+|..+++++... .++++.+++.++   ..+...++    ...+ +...+   .+.   ..++|+||.|+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD---PEE---LSDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS---GHH---HTTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc---hhH---hhcCCEEEecC
Confidence            5899999999999999988875 457766663322   12222221    2111 21111   111   25799999999


Q ss_pred             CCCcccccccccccccCCCceEEEecC
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ++....... -..+.  ++-++++.++
T Consensus        75 ~~~~~~~~~-~~~~~--~g~~ViD~s~   98 (121)
T PF01118_consen   75 PHGASKELA-PKLLK--AGIKVIDLSG   98 (121)
T ss_dssp             CHHHHHHHH-HHHHH--TTSEEEESSS
T ss_pred             chhHHHHHH-HHHhh--CCcEEEeCCH
Confidence            987664442 34456  6667887643

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=91.81  E-value=0.99  Score=39.49  Aligned_cols=73  Identities=26%  Similarity=0.423  Sum_probs=47.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH----HHHHhcCCC-ee--eeCCChHHHHHH----h-cCCCccEE
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK----DLVTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~----~~~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      ++|+|++|++|..++..+...|++|++++++.  +.    +...+.+.. ..  .|..+....+.+    . ..+++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999988899999998543  21    122333432 12  344443322222    1 12579999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      +.++|..
T Consensus        81 i~~ag~~   87 (239)
T TIGR01830        81 VNNAGIT   87 (239)
T ss_pred             EECCCCC
Confidence            9998863

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.81  E-value=1.3  Score=40.05  Aligned_cols=94  Identities=19%  Similarity=0.161  Sum_probs=63.7

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|. .-++.   -.|++|+|.|.+.-+|.=+..++...+++|+..-+.                  ..++
T Consensus       137 ~PcTp~avi~lL~-~~~i~---l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~------------------T~~l  194 (284)
T PRK14170        137 VPCTPAGIIELIK-STGTQ---IEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSR------------------TKDL  194 (284)
T ss_pred             CCCCHHHHHHHHH-HhCCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence            3444443444444 33331   378999999999999999999999889988765432                  1122


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+++-++|.+....   -+.++  ++..++++|.
T Consensus       195 ~~~~---~~ADIvI~AvG~~~~i~---~~~vk--~GavVIDvGi  230 (284)
T PRK14170        195 PQVA---KEADILVVATGLAKFVK---KDYIK--PGAIVIDVGM  230 (284)
T ss_pred             HHHH---hhCCEEEEecCCcCccC---HHHcC--CCCEEEEccC
Confidence            2222   24799999999888633   46778  8888888864

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=91.80  E-value=0.65  Score=32.67  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=23.6

Q ss_pred             CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEec
Q psy9949         187 PRDKRVLVLGASGGVGTMA-VQLLKAWDIEVVTTCS  221 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~a-i~la~~~G~~Vi~~~~  221 (383)
                      +..++|||+|++++.|++. |.+|-..|++.+.+.-
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f   72 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSF   72 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence            4458999999999999986 4444467888888874

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.77  E-value=1.5  Score=40.09  Aligned_cols=93  Identities=20%  Similarity=0.135  Sum_probs=62.3

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|.+ -+++   -.|++|.|.|.++.+|.-++.++...|++|++..+..+                  +.
T Consensus       139 ~PcTp~aii~lL~~-~~i~---l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~------------------~l  196 (301)
T PRK14194        139 TPCTPSGCLRLLED-TCGD---LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST------------------DA  196 (301)
T ss_pred             CCCcHHHHHHHHHH-hCCC---CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC------------------CH
Confidence            34544444444442 2331   37899999997779999999999999999988764321                  11


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEec
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      .+..   ...|+|+-++|.+.....   ..++  ++..++++|
T Consensus       197 ~e~~---~~ADIVIsavg~~~~v~~---~~ik--~GaiVIDvg  231 (301)
T PRK14194        197 KALC---RQADIVVAAVGRPRLIDA---DWLK--PGAVVIDVG  231 (301)
T ss_pred             HHHH---hcCCEEEEecCChhcccH---hhcc--CCcEEEEec
Confidence            2211   257999999998865443   3467  888888886

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=91.76  E-value=0.71  Score=41.34  Aligned_cols=71  Identities=21%  Similarity=0.203  Sum_probs=46.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeee-eCCC-hHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVI-DYNE-PEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~-~~~~-~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|||.||+|- |..++..+...|.+|++++.++ ..+.+...|...+. ..-+ .++. ......++|+|+|++.-
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~-~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELR-EFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHH-HHHHhcCCCEEEEcCCH
Confidence            6899997775 9888877777899999998665 44555555554443 2212 2222 22234679999998754

This enzyme was found to be a monomer by gel filtration.

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.75  E-value=1.4  Score=39.87  Aligned_cols=76  Identities=18%  Similarity=0.162  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -.|++|+|.|.+.-+|.=+..++...|+.|+..-+.                  ..++.+..   ...|+++-++|.+..
T Consensus       157 l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~------------------T~~l~~~~---~~ADIvIsAvGk~~~  215 (284)
T PRK14177        157 VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK------------------TQNLPSIV---RQADIIVGAVGKPEF  215 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHHH---hhCCEEEEeCCCcCc
Confidence            379999999999999999999999999988866532                  11222221   258999999998876


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..   -+.++  ++..++++|-
T Consensus       216 i~---~~~ik--~gavVIDvGi  232 (284)
T PRK14177        216 IK---ADWIS--EGAVLLDAGY  232 (284)
T ss_pred             cC---HHHcC--CCCEEEEecC
Confidence            33   46788  8888888864

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=91.70  E-value=0.13  Score=38.97  Aligned_cols=85  Identities=20%  Similarity=0.182  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      ++++|||.| +|.+|..-++.+...|++|++++...  +..+  +.-...   ...+.   .+..++++||-+++.+...
T Consensus         6 ~~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~~--~~~~--~~i~~~---~~~~~---~~l~~~~lV~~at~d~~~n   74 (103)
T PF13241_consen    6 KGKRVLVVG-GGPVAARKARLLLEAGAKVTVISPEI--EFSE--GLIQLI---RREFE---EDLDGADLVFAATDDPELN   74 (103)
T ss_dssp             TT-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESSE--HHHH--TSCEEE---ESS-G---GGCTTESEEEE-SS-HHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCch--hhhh--hHHHHH---hhhHH---HHHhhheEEEecCCCHHHH
Confidence            678999999 79999999999999999999999764  2112  111111   11122   1245799999999887664


Q ss_pred             ccccccccccCCCceEEEe
Q psy9949         268 INSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~  286 (383)
                      .. +.+..+  ..|.++.+
T Consensus        75 ~~-i~~~a~--~~~i~vn~   90 (103)
T PF13241_consen   75 EA-IYADAR--ARGILVNV   90 (103)
T ss_dssp             HH-HHHHHH--HTTSEEEE
T ss_pred             HH-HHHHHh--hCCEEEEE
Confidence            44 133344  57788776

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.68  E-value=1.5  Score=39.69  Aligned_cols=76  Identities=22%  Similarity=0.187  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -.|++|+|.|.+.-+|.=+..++...|++|+..-+.                  ..++.+..   ...|+++-++|.+..
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~------------------T~~l~~~~---~~ADIvIsAvGkp~~  214 (278)
T PRK14172        156 IEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK------------------TKNLKEVC---KKADILVVAIGRPKF  214 (278)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHHH---hhCCEEEEcCCCcCc
Confidence            379999999999999999999999889988766532                  11222221   248999999999886


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..   -+.++  ++..++++|-
T Consensus       215 i~---~~~ik--~gavVIDvGi  231 (278)
T PRK14172        215 ID---EEYVK--EGAIVIDVGT  231 (278)
T ss_pred             cC---HHHcC--CCcEEEEeec
Confidence            33   46788  8888888853

>KOG4169|consensus

Probab=91.64  E-value=0.71  Score=40.02  Aligned_cols=76  Identities=25%  Similarity=0.385  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHh----cCCCee--eeCCCh---HHH----HHHhcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTS----LNPNLV--IDYNEP---EAM----HSIAGAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~----lg~~~v--~~~~~~---~~~----~~i~~~~g  253 (383)
                      .|+++++.|++|++|+.....+...|+++.++. +.|+.+...+    .....+  +.++-.   +..    +.....+-
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            489999999999999999999999999888888 4454332222    222233  222221   222    22223467


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      .|+.++.+|-
T Consensus        84 iDIlINgAGi   93 (261)
T KOG4169|consen   84 IDILINGAGI   93 (261)
T ss_pred             eEEEEccccc
Confidence            9999998885

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.62  E-value=1.5  Score=39.70  Aligned_cols=94  Identities=19%  Similarity=0.093  Sum_probs=63.9

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+....+..|.. -++.   -.|++|+|.|.+.-+|.=+..++...++.|+..-+..                  .++
T Consensus       137 ~PcTp~avi~lL~~-y~i~---l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T------------------~nl  194 (282)
T PRK14166        137 LPCTPLGVMKLLKA-YEID---LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------------KDL  194 (282)
T ss_pred             cCCCHHHHHHHHHH-hCCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC------------------CCH
Confidence            44554444444542 2321   3799999999999999999999988898888554321                  112


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+..   ...|+++-++|.+....   -+.++  ++..++++|-
T Consensus       195 ~~~~---~~ADIvIsAvGkp~~i~---~~~vk--~GavVIDvGi  230 (282)
T PRK14166        195 SLYT---RQADLIIVAAGCVNLLR---SDMVK--EGVIVVDVGI  230 (282)
T ss_pred             HHHH---hhCCEEEEcCCCcCccC---HHHcC--CCCEEEEecc
Confidence            2221   25899999999988633   45778  8888888863

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=91.58  E-value=1.3  Score=37.35  Aligned_cols=74  Identities=24%  Similarity=0.383  Sum_probs=41.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-c----hH---HHHHhcCCCee---eeCCChHHHHHHh-c----CCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-D----AK---DLVTSLNPNLV---IDYNEPEAMHSIA-G----AGP  253 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~----~~---~~~~~lg~~~v---~~~~~~~~~~~i~-~----~~g  253 (383)
                      ++||+|+.|++|+.+++.+...++ +++.+.++ .    ..   +.+++.|..-.   .|..+.+-...+. .    .+.
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999998888877 88888866 1    12   23345565311   2444433333322 2    136


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      ++.||.++|..
T Consensus        82 i~gVih~ag~~   92 (181)
T PF08659_consen   82 IDGVIHAAGVL   92 (181)
T ss_dssp             EEEEEE-----
T ss_pred             cceeeeeeeee
Confidence            78899888763

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN00203 glutamyl-tRNA reductase

Probab=91.48  E-value=1.1  Score=44.56  Aligned_cols=72  Identities=21%  Similarity=0.299  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +.+|+|.| +|.+|.+++..+...|+ +|+++.++. +. .++..++...+  ....  +..+.   ..+.|+||.|++.
T Consensus       266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~--dl~~a---l~~aDVVIsAT~s  339 (519)
T PLN00203        266 SARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD--EMLAC---AAEADVVFTSTSS  339 (519)
T ss_pred             CCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh--hHHHH---HhcCCEEEEccCC
Confidence            67899999 79999999999999998 788888664 33 45555542211  1111  12222   2479999999887


Q ss_pred             Ccc
Q psy9949         264 PLD  266 (383)
Q Consensus       264 ~~~  266 (383)
                      +..
T Consensus       340 ~~p  342 (519)
T PLN00203        340 ETP  342 (519)
T ss_pred             CCC
Confidence            653

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=91.43  E-value=1.9  Score=39.27  Aligned_cols=94  Identities=18%  Similarity=0.142  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhc-CCC-eeeeCCChHHHHHHhcCCCccEEEEcCC--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSL-NPN-LVIDYNEPEAMHSIAGAGPYDVILDAAG--  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~l-g~~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g--  262 (383)
                      +..+|.|+| .|-+|.-++.+|..+|++|...+.+ +|+..+..+ +.. .+.-++..++.+.++   ..|++|.++=  
T Consensus       167 ~~~kv~iiG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~---~aDlvIgaVLIp  242 (371)
T COG0686         167 LPAKVVVLG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK---KADLVIGAVLIP  242 (371)
T ss_pred             CCccEEEEC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh---hccEEEEEEEec
Confidence            345688888 7999999999999999999999954 677666553 333 334444455555543   5888887642  


Q ss_pred             CC---cccccccccccccCCCceEEEec
Q psy9949         263 IP---LDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       263 ~~---~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      +.   ......+.+.|+  |++.+|++.
T Consensus       243 gakaPkLvt~e~vk~Mk--pGsVivDVA  268 (371)
T COG0686         243 GAKAPKLVTREMVKQMK--PGSVIVDVA  268 (371)
T ss_pred             CCCCceehhHHHHHhcC--CCcEEEEEE
Confidence            21   111122267788  898888873

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.37  E-value=0.9  Score=44.41  Aligned_cols=70  Identities=24%  Similarity=0.377  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH------HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK------DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~------~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      .+++|+|.| +|.+|..++..+...|++|++++.....      +.+.+.|.. ++..+..+   .  ..+++|+||.++
T Consensus         4 ~~k~v~iiG-~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~---~--~~~~~d~vv~~~   76 (450)
T PRK14106          4 KGKKVLVVG-AGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPE---E--FLEGVDLVVVSP   76 (450)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcch---h--HhhcCCEEEECC
Confidence            468899999 6779999999999999999999865321      223344544 32222221   1  124699999998


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            864

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.24  E-value=1.7  Score=39.62  Aligned_cols=76  Identities=22%  Similarity=0.223  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -.|++|+|.|.+.-+|.=+..|+...+++|+..-+..                  .++.+.+   ...|+++-++|.+..
T Consensus       158 l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T------------------~~l~~~~---~~ADIvVsAvGkp~~  216 (294)
T PRK14187        158 LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT------------------RDLADYC---SKADILVAAVGIPNF  216 (294)
T ss_pred             CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC------------------CCHHHHH---hhCCEEEEccCCcCc
Confidence            3789999999999999999999999999888665421                  1122211   258999999998876


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..   -+.++  ++..++++|-
T Consensus       217 i~---~~~ik--~gaiVIDVGi  233 (294)
T PRK14187        217 VK---YSWIK--KGAIVIDVGI  233 (294)
T ss_pred             cC---HHHcC--CCCEEEEecc
Confidence            33   45777  8888888864

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=91.22  E-value=1.5  Score=39.99  Aligned_cols=94  Identities=20%  Similarity=0.215  Sum_probs=64.1

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|.. -++.   -.|++|+|.|-+.-+|.=+..|+...|++|+..-+.                  ..++
T Consensus       147 ~PcTp~avi~lL~~-~~i~---l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~------------------T~nl  204 (299)
T PLN02516        147 LPCTPKGCLELLSR-SGIP---IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR------------------TPDP  204 (299)
T ss_pred             CCCCHHHHHHHHHH-hCCC---CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence            44554444444542 2331   379999999999999999999999889988877542                  1112


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+++-++|.+....   -+.++  ++..++++|-
T Consensus       205 ~~~~---~~ADIvv~AvGk~~~i~---~~~vk--~gavVIDvGi  240 (299)
T PLN02516        205 ESIV---READIVIAAAGQAMMIK---GDWIK--PGAAVIDVGT  240 (299)
T ss_pred             HHHH---hhCCEEEEcCCCcCccC---HHHcC--CCCEEEEeec
Confidence            2222   25799999999875432   46788  8888888864

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=91.21  E-value=0.9  Score=39.76  Aligned_cols=90  Identities=22%  Similarity=0.304  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHh----cCCCeeeeCCChHHHHHHhcC-CCccEEEEc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTS----LNPNLVIDYNEPEAMHSIAGA-GPYDVILDA-  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~----lg~~~v~~~~~~~~~~~i~~~-~g~d~v~d~-  260 (383)
                      +|.+||=.|..|  |.+..-+|+. |++|++++ +.+..+.++.    -|..  ++|.... .+++... +.||+|+.. 
T Consensus        59 ~g~~vLDvGCGg--G~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~-~edl~~~~~~FDvV~cmE  132 (243)
T COG2227          59 PGLRVLDVGCGG--GILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVN--IDYRQAT-VEDLASAGGQFDVVTCME  132 (243)
T ss_pred             CCCeEEEecCCc--cHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhcccc--ccchhhh-HHHHHhcCCCccEEEEhh
Confidence            778899888433  5666666654 79999999 4455565542    2222  4565543 3444443 679998863 


Q ss_pred             ----CCCCcccccccccccccCCCceEEE
Q psy9949         261 ----AGIPLDQINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       261 ----~g~~~~~~~~~~~~l~~~~~G~~v~  285 (383)
                          +..+.....++.+.++  |+|.++.
T Consensus       133 VlEHv~dp~~~~~~c~~lvk--P~G~lf~  159 (243)
T COG2227         133 VLEHVPDPESFLRACAKLVK--PGGILFL  159 (243)
T ss_pred             HHHccCCHHHHHHHHHHHcC--CCcEEEE
Confidence                3444433333378889  9998875

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.20  E-value=1.7  Score=39.28  Aligned_cols=94  Identities=19%  Similarity=0.114  Sum_probs=63.9

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+....+..|... ++.   -.|++|+|.|.+.-+|.=++.++...||+|+..-+..                  .++
T Consensus       138 ~PcTp~aii~lL~~y-~i~---l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T------------------~dl  195 (282)
T PRK14180        138 ESCTPKGIMTMLREY-GIK---TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------------TDL  195 (282)
T ss_pred             CCCCHHHHHHHHHHh-CCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC------------------CCH
Confidence            445444444445432 221   3799999999999999999999998899886654321                  112


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+++-++|.+....   -+.++  ++..++++|-
T Consensus       196 ~~~~---k~ADIvIsAvGkp~~i~---~~~vk--~gavVIDvGi  231 (282)
T PRK14180        196 KSHT---TKADILIVAVGKPNFIT---ADMVK--EGAVVIDVGI  231 (282)
T ss_pred             HHHh---hhcCEEEEccCCcCcCC---HHHcC--CCcEEEEecc
Confidence            2111   25899999999988633   46778  8888888864

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=91.10  E-value=1.2  Score=44.57  Aligned_cols=88  Identities=16%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-  266 (383)
                      .|++|.|.| .|.+|...++.++.+|++|++.++....+....+|...+      ++.+-+   ...|+|+-+...... 
T Consensus       139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~------~l~ell---~~aDiV~l~lP~t~~t  208 (526)
T PRK13581        139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV------SLDELL---ARADFITLHTPLTPET  208 (526)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE------cHHHHH---hhCCEEEEccCCChHh
Confidence            478999999 999999999999999999999986433333344554322      122222   246777777664321 


Q ss_pred             ---cccccccccccCCCceEEEec
Q psy9949         267 ---QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ---~~~~~~~~l~~~~~G~~v~~~  287 (383)
                         .....++.++  ++..+|.++
T Consensus       209 ~~li~~~~l~~mk--~ga~lIN~a  230 (526)
T PRK13581        209 RGLIGAEELAKMK--PGVRIINCA  230 (526)
T ss_pred             hcCcCHHHHhcCC--CCeEEEECC
Confidence               1111255666  777777664

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=91.02  E-value=1.1  Score=35.17  Aligned_cols=89  Identities=21%  Similarity=0.225  Sum_probs=47.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-CCCEEEEEe-cCch----HHHHH--hcCCCeeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKA-WDIEVVTTC-SGDA----KDLVT--SLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~-~~~~----~~~~~--~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      +|.|+|..|-+|..+++.+.. .+.++.+.. ++..    .+...  ..+...+..++  ++. .+.+  .+|+++|++.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~--~l~-~~~~--~~DVvIDfT~   76 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTD--DLE-ELLE--EADVVIDFTN   76 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS---HH-HHTT--H-SEEEEES-
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccch--hHH-Hhcc--cCCEEEEcCC
Confidence            689999779999999999998 567877776 4331    11111  11111111121  222 2222  2999999994


Q ss_pred             CCcccccccccccccCCCceEEEecC
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .......  ++...  +.|.-+.+|.
T Consensus        77 p~~~~~~--~~~~~--~~g~~~ViGT   98 (124)
T PF01113_consen   77 PDAVYDN--LEYAL--KHGVPLVIGT   98 (124)
T ss_dssp             HHHHHHH--HHHHH--HHT-EEEEE-
T ss_pred             hHHhHHH--HHHHH--hCCCCEEEEC
Confidence            3333333  44444  4465555543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK07340 ornithine cyclodeaminase; Validated

Probab=90.97  E-value=3.8  Score=37.80  Aligned_cols=91  Identities=8%  Similarity=0.004  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEecCc-h-HHHHHhcCCC--eeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLK-AWDI-EVVTTCSGD-A-KDLVTSLNPN--LVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~-~~G~-~Vi~~~~~~-~-~~~~~~lg~~--~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      ....+++|.| +|..|.+.+..+. ..+. +|.+..++. + .+++.++...  .+. .  .+..+.+   .+.|+|+.|
T Consensus       123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~--~~~~~av---~~aDiVita  195 (304)
T PRK07340        123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P--LDGEAIP---EAVDLVVTA  195 (304)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E--CCHHHHh---hcCCEEEEc
Confidence            4567899999 8999998888876 4676 566666553 3 2455555321  111 1  1222222   479999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCC
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      +.+..-...  . .++  ++-++..+|++
T Consensus       196 T~s~~Pl~~--~-~~~--~g~hi~~iGs~  219 (304)
T PRK07340        196 TTSRTPVYP--E-AAR--AGRLVVAVGAF  219 (304)
T ss_pred             cCCCCceeC--c-cCC--CCCEEEecCCC
Confidence            987764333  2 356  77777777654

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=90.94  E-value=1.1  Score=44.12  Aligned_cols=70  Identities=20%  Similarity=0.256  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch------HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA------KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~------~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      .+++|+|.| .|.+|+.++.+++..|.+|++++..+.      .+.+++.|..........       ...++|.|+.+.
T Consensus        15 ~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~~~~~D~Vv~s~   86 (480)
T PRK01438         15 QGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------LPEDTDLVVTSP   86 (480)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------ccCCCCEEEECC
Confidence            567899999 899999999999999999998874331      133556676533322111       123589999888


Q ss_pred             CCCc
Q psy9949         262 GIPL  265 (383)
Q Consensus       262 g~~~  265 (383)
                      |.+.
T Consensus        87 Gi~~   90 (480)
T PRK01438         87 GWRP   90 (480)
T ss_pred             CcCC
Confidence            8753

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.91  E-value=2  Score=38.88  Aligned_cols=75  Identities=23%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      .|.+|+|.|.+.-+|.-+..++...|++|+...+..                  .++.+.+   ..+|++|.++|.+...
T Consensus       151 ~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t------------------~~L~~~~---~~ADIvI~Avgk~~lv  209 (279)
T PRK14178        151 AGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT------------------ENLKAEL---RQADILVSAAGKAGFI  209 (279)
T ss_pred             CCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh------------------hHHHHHH---hhCCEEEECCCccccc
Confidence            789999999888999999999999999888776432                  1222222   3589999999877542


Q ss_pred             ccccccccccCCCceEEEecC
Q psy9949         268 INSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .   -+.++  ++..++++|.
T Consensus       210 ~---~~~vk--~GavVIDVgi  225 (279)
T PRK14178        210 T---PDMVK--PGATVIDVGI  225 (279)
T ss_pred             C---HHHcC--CCcEEEEeec
Confidence            2   34577  8999999864

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=90.88  E-value=0.89  Score=46.87  Aligned_cols=75  Identities=25%  Similarity=0.249  Sum_probs=46.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch-HH-HHHhcCCCee-eeCCC-hHHHHHHhcCCCccEEEEcC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA-KD-LVTSLNPNLV-IDYNE-PEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~-~~-~~~~lg~~~v-~~~~~-~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +++.+|||+||+|-+|..+++.+... |.+|+++++... .. ....-+...+ .|..+ ..+...+  ..++|+||.++
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~--l~~~D~ViHlA  390 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYH--IKKCDVVLPLV  390 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHH--hcCCCEEEECc
Confidence            56789999999999999999888765 689999996542 11 1111112111 12222 1222221  24799999987


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      +.
T Consensus       391 a~  392 (660)
T PRK08125        391 AI  392 (660)
T ss_pred             cc
Confidence            63

>PLN02650 dihydroflavonol-4-reductase

Probab=90.86  E-value=1.2  Score=41.92  Aligned_cols=36  Identities=31%  Similarity=0.309  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      ...++|||+||+|-+|..++..+...|.+|++++++
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~   38 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRD   38 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcC
Confidence            345789999999999999999998899999998854

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.85  E-value=2.2  Score=39.08  Aligned_cols=94  Identities=20%  Similarity=0.129  Sum_probs=63.2

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCeeeeCCChH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLVIDYNEPE  243 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v~~~~~~~  243 (383)
                      +||+....+..|.. -++.   -.|++|+|+|.++.+|.-++.++...|+.|++.. +...                   
T Consensus       138 ~PcTp~ai~~ll~~-~~i~---~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-------------------  194 (296)
T PRK14188        138 VPCTPLGCMMLLRR-VHGD---LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-------------------  194 (296)
T ss_pred             cCCCHHHHHHHHHH-hCCC---CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-------------------
Confidence            44444444444443 2221   3799999999999999999999988899988874 3321                   


Q ss_pred             HHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         244 AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       244 ~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      +.+..   ...|+|+-++|.+.....   ..++  ++..++++|..
T Consensus       195 l~e~~---~~ADIVIsavg~~~~v~~---~~lk--~GavVIDvGin  232 (296)
T PRK14188        195 LPAVC---RRADILVAAVGRPEMVKG---DWIK--PGATVIDVGIN  232 (296)
T ss_pred             HHHHH---hcCCEEEEecCChhhcch---heec--CCCEEEEcCCc
Confidence            11111   257999999998775333   3467  88888888643

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=90.84  E-value=0.62  Score=38.37  Aligned_cols=75  Identities=13%  Similarity=0.067  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      .+++|+|.| +|.+|.--++.+...|++|+++.. +..+.+.+++.-. +..+  .+.+.  +..++|+||-+++.....
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp-~~~~~l~~l~~i~-~~~~--~~~~~--dl~~a~lViaaT~d~e~N   84 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP-EICKEMKELPYIT-WKQK--TFSND--DIKDAHLIYAATNQHAVN   84 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC-ccCHHHHhccCcE-EEec--ccChh--cCCCceEEEECCCCHHHH
Confidence            678999999 899999988888888999888853 2222223344211 2111  11110  235799999999887754


Q ss_pred             cc
Q psy9949         268 IN  269 (383)
Q Consensus       268 ~~  269 (383)
                      ..
T Consensus        85 ~~   86 (157)
T PRK06719         85 MM   86 (157)
T ss_pred             HH
Confidence            44

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=90.84  E-value=0.92  Score=39.18  Aligned_cols=72  Identities=14%  Similarity=0.057  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .+++|+|.| +|.+|...++.+...|++|++++...  ....+.+.|.-..+ ..+.. ...   ..++++||-+++.+.
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~-~~d---l~~~~lVi~at~d~~   81 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWL-ARCFD-ADI---LEGAFLVIAATDDEE   81 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEE-eCCCC-HHH---hCCcEEEEECCCCHH
Confidence            578999999 89999999999999999999888543  22223333311111 11111 111   246888888888763

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.77  E-value=2  Score=39.22  Aligned_cols=76  Identities=22%  Similarity=0.153  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      .|++|+|.|.+.-+|.=+..++...|++|+..-+..                  .++.+.+   ...|+++-++|.+...
T Consensus       157 ~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T------------------~~l~~~~---~~ADIvIsAvGkp~~i  215 (297)
T PRK14186        157 AGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT------------------QDLASIT---READILVAAAGRPNLI  215 (297)
T ss_pred             CCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC------------------CCHHHHH---hhCCEEEEccCCcCcc
Confidence            789999999999999999999998999887664321                  1122211   2488999999987653


Q ss_pred             ccccccccccCCCceEEEecCC
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .   -+.++  ++..++++|..
T Consensus       216 ~---~~~ik--~gavVIDvGin  232 (297)
T PRK14186        216 G---AEMVK--PGAVVVDVGIH  232 (297)
T ss_pred             C---HHHcC--CCCEEEEeccc
Confidence            3   46778  88888888743

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=90.76  E-value=1.5  Score=38.41  Aligned_cols=72  Identities=28%  Similarity=0.376  Sum_probs=45.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-HH---HHhcCCC-ee--eeCCChHHHHHH-----hcCCCccEE
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-DL---VTSLNPN-LV--IDYNEPEAMHSI-----AGAGPYDVI  257 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~~---~~~lg~~-~v--~~~~~~~~~~~i-----~~~~g~d~v  257 (383)
                      ++|+|++|++|..+++.+...|++|+.+++..  +. +.   +++.+.. ..  .|..+.+-...+     ...+..|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999998999998887542  22 22   2233332 11  344443222221     123578999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      +.++|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01831        81 VLNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998874

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=90.74  E-value=0.91  Score=41.53  Aligned_cols=88  Identities=16%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCchHHHH-HHHHHHHCCCEEEEEecCc----hHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEc
Q psy9949         189 DKRVLVLGASGGVGTM-AVQLLKAWDIEVVTTCSGD----AKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDA  260 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~-ai~la~~~G~~Vi~~~~~~----~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~  260 (383)
                      .-+|.|.| +|.+|.. +..+.+.-+.++.++++.+    .+.+++++|.....  .  ++. .+.+.   .++|+||++
T Consensus         4 klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~--~--~ie-~LL~~~~~~dIDiVf~A   77 (302)
T PRK08300          4 KLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA--E--GID-GLLAMPEFDDIDIVFDA   77 (302)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc--C--CHH-HHHhCcCCCCCCEEEEC
Confidence            35799999 9999986 5555555567999888432    23556778854322  2  122 23222   579999999


Q ss_pred             CCCCcccccccccccccCCCceEEEe
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ++.......  ...+.  +.|+.+..
T Consensus        78 T~a~~H~e~--a~~a~--eaGk~VID   99 (302)
T PRK08300         78 TSAGAHVRH--AAKLR--EAGIRAID   99 (302)
T ss_pred             CCHHHHHHH--HHHHH--HcCCeEEE
Confidence            998755444  33344  45555544

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=90.73  E-value=1.4  Score=40.77  Aligned_cols=90  Identities=14%  Similarity=0.170  Sum_probs=55.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      ..+|.|.| .|.+|.+.+..++..|.  +|++.++++ +.+.+++.|.......   +..+.   ..+.|+||.|+....
T Consensus         6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~---~~~~~---~~~aDvViiavp~~~   78 (307)
T PRK07502          6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT---SAAEA---VKGADLVILCVPVGA   78 (307)
T ss_pred             CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC---CHHHH---hcCCCEEEECCCHHH
Confidence            36899999 99999999998888885  788887654 4566666765321111   11111   246899999987654


Q ss_pred             cccc--ccccccccCCCceEEEec
Q psy9949         266 DQIN--SYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 ~~~~--~~~~~l~~~~~G~~v~~~  287 (383)
                      ....  .+...++  ++..+++++
T Consensus        79 ~~~v~~~l~~~l~--~~~iv~dvg  100 (307)
T PRK07502         79 SGAVAAEIAPHLK--PGAIVTDVG  100 (307)
T ss_pred             HHHHHHHHHhhCC--CCCEEEeCc
Confidence            3111  1123344  555565554

>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A

Probab=90.72  E-value=0.51  Score=37.80  Aligned_cols=30  Identities=17%  Similarity=0.297  Sum_probs=25.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      ++|+| +|.++++++++|+.+|++|++++..
T Consensus         1 L~I~G-aG~va~al~~la~~lg~~v~v~d~r   30 (136)
T PF13478_consen    1 LVIFG-AGHVARALARLAALLGFRVTVVDPR   30 (136)
T ss_dssp             EEEES--STCHHHHHHHHHHCTEEEEEEES-
T ss_pred             CEEEe-CcHHHHHHHHHHHhCCCEEEEEcCC
Confidence            47888 8999999999999999999999944

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=90.70  E-value=1.2  Score=38.36  Aligned_cols=34  Identities=26%  Similarity=0.493  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~  222 (383)
                      .+.+|+|.| .|++|..+++.+...|. +++.++.+
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            457899999 99999999999999998 78888754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=90.61  E-value=1.3  Score=41.68  Aligned_cols=70  Identities=21%  Similarity=0.174  Sum_probs=42.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch-HHHHHhcCCCeee--eCC-ChHHHHHHhcCCCccEEEEcCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA-KDLVTSLNPNLVI--DYN-EPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~-~~~~~~lg~~~v~--~~~-~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      +|+|+||+|-+|..++..+... |.+|+++++... ...........++  |.. +......+  ..++|+||.+++
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~~d~ViH~aa   77 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYH--VKKCDVILPLVA   77 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHH--HcCCCEEEECcc
Confidence            6999999999999998888765 689999986432 2211111111222  322 22222222  237999999865

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=90.50  E-value=1.4  Score=39.32  Aligned_cols=33  Identities=36%  Similarity=0.464  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      ++.+|+|.| .|.+|..+++++..+|++|+++++
T Consensus        37 ~g~~vaIqG-fGnVG~~~a~~L~e~GakvvaVsD   69 (254)
T cd05313          37 KGKRVAISG-SGNVAQYAAEKLLELGAKVVTLSD   69 (254)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence            678999999 999999999999999999998875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=90.50  E-value=0.7  Score=45.01  Aligned_cols=36  Identities=28%  Similarity=0.289  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      +++.+|+|+||+|-+|..++..+...|.+|+++++.
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~  153 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF  153 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            456789999999999999999999899999999853

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=90.50  E-value=0.72  Score=43.19  Aligned_cols=89  Identities=18%  Similarity=0.178  Sum_probs=53.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCchH-HHHHhcCCCeee-eCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDI---EVVTTCSGDAK-DLVTSLNPNLVI-DYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~---~Vi~~~~~~~~-~~~~~lg~~~v~-~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|+|.||+|.+|..+++++...+.   ++.++++.... +...-.+.+..+ +....    .   ..++|+||.|+|+.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~----~---~~~vDvVf~A~g~g   74 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF----D---FSGVDIALFSAGGS   74 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH----H---HcCCCEEEECCChH
Confidence            4799999999999999999988654   55666654321 111111222222 12111    1   23799999999987


Q ss_pred             cccccccccccccCCCceEEEecC
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .....+ -+.+.  .+..+++.++
T Consensus        75 ~s~~~~-~~~~~--~G~~VIDlS~   95 (334)
T PRK14874         75 VSKKYA-PKAAA--AGAVVIDNSS   95 (334)
T ss_pred             HHHHHH-HHHHh--CCCEEEECCc
Confidence            664441 33445  5556666554

>PLN02206 UDP-glucuronate decarboxylase

Probab=90.49  E-value=0.89  Score=44.35  Aligned_cols=35  Identities=31%  Similarity=0.350  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      .++.+|||+||+|-+|..++..+...|.+|+++++
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~  151 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN  151 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence            36689999999999999999999999999999874

>PRK07574 formate dehydrogenase; Provisional

Probab=90.49  E-value=1.6  Score=41.51  Aligned_cols=89  Identities=17%  Similarity=0.169  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++.. ..+....++...   +.  ++.+.+   ...|+|+-+......
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~---~~--~l~ell---~~aDvV~l~lPlt~~  261 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY---HV--SFDSLV---SVCDVVTIHCPLHPE  261 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee---cC--CHHHHh---hcCCEEEEcCCCCHH
Confidence            567999999 99999999999999999999998653 233333444321   11  122222   347887777664321


Q ss_pred             ----cccccccccccCCCceEEEec
Q psy9949         267 ----QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ----~~~~~~~~l~~~~~G~~v~~~  287 (383)
                          .....++.|+  ++..+|.++
T Consensus       262 T~~li~~~~l~~mk--~ga~lIN~a  284 (385)
T PRK07574        262 TEHLFDADVLSRMK--RGSYLVNTA  284 (385)
T ss_pred             HHHHhCHHHHhcCC--CCcEEEECC
Confidence                1111256667  776776653

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=90.46  E-value=2.2  Score=32.90  Aligned_cols=93  Identities=14%  Similarity=0.121  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCc-hHHH----HHhcCCCee--eeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGD-AKDL----VTSLNPNLV--IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~-~~~~----~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .++++|+-.| +|. |..+..+++..+ .+|++++.++ ..+.    ++.++..++  +..+.......  ....+|+|+
T Consensus        18 ~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~D~v~   93 (124)
T TIGR02469        18 RPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALED--SLPEPDRVF   93 (124)
T ss_pred             CCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChh--hcCCCCEEE
Confidence            6778899998 554 999999999875 5999999554 3333    334443322  22221110111  123699998


Q ss_pred             EcCCCCc---ccccccccccccCCCceEEEe
Q psy9949         259 DAAGIPL---DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~g~~~---~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      -..+...   .... +.+.++  ++|+++..
T Consensus        94 ~~~~~~~~~~~l~~-~~~~Lk--~gG~li~~  121 (124)
T TIGR02469        94 IGGSGGLLQEILEA-IWRRLR--PGGRIVLN  121 (124)
T ss_pred             ECCcchhHHHHHHH-HHHHcC--CCCEEEEE
Confidence            7543322   1222 267888  99998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PLN03075 nicotianamine synthase; Provisional

Probab=90.42  E-value=1  Score=41.08  Aligned_cols=97  Identities=15%  Similarity=0.120  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHHh-----cCCCeeeeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVTS-----LNPNLVIDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~~-----lg~~~v~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .+.++|+-.| +|..|+.++.+++.+  +.+++.++.++ ..+.+++     .+...-+.....+..+.....++||+||
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF  200 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF  200 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence            4678899999 999999888888654  44899999554 3344432     2222211111112222111236799999


Q ss_pred             EcCC------CCcccccccccccccCCCceEEEe
Q psy9949         259 DAAG------IPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~g------~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      -.+=      ........+.+.|+  ++|.++.-
T Consensus       201 ~~ALi~~dk~~k~~vL~~l~~~Lk--PGG~Lvlr  232 (296)
T PLN03075        201 LAALVGMDKEEKVKVIEHLGKHMA--PGALLMLR  232 (296)
T ss_pred             EecccccccccHHHHHHHHHHhcC--CCcEEEEe
Confidence            8742      11111222256788  99998763

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.36  E-value=2.4  Score=38.42  Aligned_cols=94  Identities=21%  Similarity=0.219  Sum_probs=62.9

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|. .-++.   -.|++|+|.|.+.-+|.=+..++...+++|+..-+.                  ..++
T Consensus       137 ~PcTp~avi~ll~-~~~i~---l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~------------------T~nl  194 (282)
T PRK14182        137 RPCTPAGVMRMLD-EARVD---PKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR------------------TADL  194 (282)
T ss_pred             CCCCHHHHHHHHH-HhCCC---CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCH
Confidence            4444443444443 33331   489999999999999999999998889988765432                  1112


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+++-++|.+....   -+.++  ++..++++|-
T Consensus       195 ~~~~---~~ADIvI~AvGk~~~i~---~~~ik--~gaiVIDvGi  230 (282)
T PRK14182        195 AGEV---GRADILVAAIGKAELVK---GAWVK--EGAVVIDVGM  230 (282)
T ss_pred             HHHH---hhCCEEEEecCCcCccC---HHHcC--CCCEEEEeec
Confidence            2221   24899999999866433   46778  8888888864

>PLN02778 3,5-epimerase/4-reductase

Probab=90.33  E-value=1.4  Score=40.55  Aligned_cols=33  Identities=18%  Similarity=0.299  Sum_probs=28.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT  219 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~  219 (383)
                      ....+|||+||+|-+|..+++.+...|.+|+..
T Consensus         7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~   39 (298)
T PLN02778          7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG   39 (298)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence            345789999999999999999999999988754

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=90.29  E-value=1.7  Score=40.88  Aligned_cols=73  Identities=16%  Similarity=0.238  Sum_probs=44.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC---chHHHHHhcC--CC-ee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG---DAKDLVTSLN--PN-LV--IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~---~~~~~~~~lg--~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|||+||+|.+|..++..+...|.+ |+.+.+.   .+.+....+.  .. .+  .|..+.+-..++.+..++|+||.++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHLA   81 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEECC
Confidence            5999999999999999999888874 5544432   1222222221  11 11  2444433233333334799999998


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      +.
T Consensus        82 ~~   83 (352)
T PRK10084         82 AE   83 (352)
T ss_pred             cc
Confidence            75

>KOG1252|consensus

Probab=90.22  E-value=1.2  Score=40.85  Aligned_cols=55  Identities=15%  Similarity=0.254  Sum_probs=45.8

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----chHHHHHhcCCCeee
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----DAKDLVTSLNPNLVI  237 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----~~~~~~~~lg~~~v~  237 (383)
                      .+.+    .+|.++||-.-+|..|...+.+++..|+++|++...    ++...++.+|+.-+.
T Consensus        97 ~G~i----~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   97 KGLI----TPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             cCCc----cCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            4556    899999999999999999999999999999999843    345677889986553

>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes

Probab=90.16  E-value=3  Score=34.78  Aligned_cols=73  Identities=21%  Similarity=0.375  Sum_probs=40.1

Q ss_pred             CCCCEEEEEcCCchH---HHHHHHHHHHCCCEEEE--EecCch--------HHHHHhcCCCeeeeCCCh-HHHHHHhcCC
Q psy9949         187 PRDKRVLVLGASGGV---GTMAVQLLKAWDIEVVT--TCSGDA--------KDLVTSLNPNLVIDYNEP-EAMHSIAGAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~v---G~~ai~la~~~G~~Vi~--~~~~~~--------~~~~~~lg~~~v~~~~~~-~~~~~i~~~~  252 (383)
                      .+..+|+|+-|.|.-   |+.++..+...|.+|.+  ....++        .+.++++|...+ ..... +....+   .
T Consensus        23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~---~   98 (169)
T PF03853_consen   23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVYLVGPPEKLSEDAKQQLEILKKMGIKII-ELDSDEDLSEAL---E   98 (169)
T ss_dssp             CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEEEEESSSSTSHHHHHHHHHHHHTT-EEE-SSCCGSGGGHHG---S
T ss_pred             cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEEEEeccccCCHHHHHHHHHHHhcCCcEe-eccccchhhccc---c
Confidence            456677766445544   57777777788997777  333221        245667776433 32222 222222   2


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      .+|+|||+.=+
T Consensus        99 ~~dlIIDal~G  109 (169)
T PF03853_consen   99 PADLIIDALFG  109 (169)
T ss_dssp             CESEEEEES-S
T ss_pred             cccEEEEeccc
Confidence            79999998644

In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=90.00  E-value=5.6  Score=37.06  Aligned_cols=91  Identities=14%  Similarity=0.195  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEecCc-h-HHHHHhc----CCCeeeeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLK-AWDI-EVVTTCSGD-A-KDLVTSL----NPNLVIDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~-~~G~-~Vi~~~~~~-~-~~~~~~l----g~~~v~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      +...+++|.| +|+.+.+.+..+. ..+. +|.+..++. + .++++++    |.. +...++  ..+.+   .+.|+|+
T Consensus       127 ~~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~--~~~av---~~aDiVv  199 (326)
T TIGR02992       127 EDSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD--PRAAM---SGADIIV  199 (326)
T ss_pred             CCCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC--HHHHh---ccCCEEE
Confidence            4557899999 8999988777776 5776 677776653 3 2344443    432 222222  22222   4699999


Q ss_pred             EcCCCCcccccccccccccCCCceEEEecC
Q psy9949         259 DAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       259 d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .|++...-...  .+.++  ++-.+..+|.
T Consensus       200 taT~s~~p~i~--~~~l~--~g~~i~~vg~  225 (326)
T TIGR02992       200 TTTPSETPILH--AEWLE--PGQHVTAMGS  225 (326)
T ss_pred             EecCCCCcEec--HHHcC--CCcEEEeeCC
Confidence            99987553333  34666  7666666654

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=89.99  E-value=1  Score=43.14  Aligned_cols=89  Identities=26%  Similarity=0.402  Sum_probs=50.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC-C-EEEEEecCch-HH-HHHhcC-C--C-eeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         192 VLVLGASGGVGTMAVQLLKAWD-I-EVVTTCSGDA-KD-LVTSLN-P--N-LVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       192 VlI~ga~g~vG~~ai~la~~~G-~-~Vi~~~~~~~-~~-~~~~lg-~--~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.+ .+ ++.++. .  . ..+|..+.+-..++  ..+.|+|++|+|.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~--~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAEL--LRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHH--HTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHH--HhcCCEEEECCcc
Confidence            789997 999999999988765 4 7888887654 33 444322 1  1 12454443322222  2467999999987


Q ss_pred             CcccccccccccccCCCceEEEe
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ....... ..|++  .+-.+++.
T Consensus        78 ~~~~~v~-~~~i~--~g~~yvD~   97 (386)
T PF03435_consen   78 FFGEPVA-RACIE--AGVHYVDT   97 (386)
T ss_dssp             GGHHHHH-HHHHH--HT-EEEES
T ss_pred             chhHHHH-HHHHH--hCCCeecc
Confidence            6433221 44566  56677764

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.98  E-value=2.5  Score=38.34  Aligned_cols=76  Identities=21%  Similarity=0.226  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -.|++|+|.|.+.-+|.=+..++...++.|+..-+.                  ..++.+..   ...|+++-++|.+..
T Consensus       157 l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~------------------T~~L~~~~---~~ADIvV~AvGkp~~  215 (288)
T PRK14171        157 LTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK------------------THNLSSIT---SKADIVVAAIGSPLK  215 (288)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHHH---hhCCEEEEccCCCCc
Confidence            378999999999999999999999889988754432                  11222222   248999999998764


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..   -++++  ++..++++|-
T Consensus       216 i~---~~~vk--~GavVIDvGi  232 (288)
T PRK14171        216 LT---AEYFN--PESIVIDVGI  232 (288)
T ss_pred             cC---HHHcC--CCCEEEEeec
Confidence            33   46788  8888888863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	383
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		7e-63
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		2e-17
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		5e-17
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		5e-14
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		7e-13
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		1e-12
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		2e-12
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		2e-12
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		7e-11
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		2e-10
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		1e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		1e-08
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		1e-07
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		2e-07
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		4e-07
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		5e-07
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		6e-07
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		7e-07
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		7e-07
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		7e-06
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		1e-05
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		2e-05
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-05
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		3e-05
3nx4_A	324	Crystal Structure Of The Yhdh Oxidoreductase From S		8e-05
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		2e-04
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		2e-04
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		3e-04
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		5e-04
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		6e-04
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		9e-04

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score =  237 bits (605), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 135/359 (37%), Positives = 195/359 (54%), Gaps = 8/359 (2%)
Query: 26  RTAAWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNS 84
           ++ AW I  YG  + L+F  N+  PI+    +V+V++ A SVNPIDV M  GYG   LN 
Sbjct: 21  QSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 80
Query: 85  LRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLIL 144
            R      ++   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ ++
Sbjct: 81  KRDPLHVKIKGE-EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVV 139
Query: 145 ADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTM 204
                V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVGT 
Sbjct: 140 VSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTF 199
Query: 205 AVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP 264
           A+Q++KAWD  V   CS DA +LV  L  + VIDY        +    P+D ILD  G  
Sbjct: 200 AIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG-- 257
Query: 265 LDQINSYLP-FLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT 323
                ++ P FLK    + +VTL +PFL N D LG+  G+++    +     +     K 
Sbjct: 258 -GSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALK--HFWKG 314
Query: 324 NTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
              RW FFM     + +I + ++ G+I+PVI+  + F ++P AF KV++GH RGK ++N
Sbjct: 315 VHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 151/355 (42%), Gaps = 47/355 (13%)
Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A Q   +G    L+  D   TP  +    L+++ A S+NPID     G G V     ++L
Sbjct: 9   AIQFDQFGPPKVLKLVDT-PTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVA----KKL 63
Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-PHKQGSFSKLILADS 147
           +          P  LG DF G+++  G  V ++NI D V G+   P     +++ + A  
Sbjct: 64  KN-------NLPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASP 116
Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSAL-QITAALGLVYPRDKRVLVLGASGGVGTMAV 206
             + +K   +S  +AA +   GLTA  AL Q     G V      VL+   +GGVG +A+
Sbjct: 117 DTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDV------VLIHAGAGGVGHLAI 170
Query: 207 QLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266
           QL K     V+TT S      + +L     I+Y+E + + +I  + P D ++D  G  + 
Sbjct: 171 QLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAI--STPVDAVIDLVGGDVG 228
Query: 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTI 326
            I S     +TG       +  P +     + +     + AF LLK  F   EL      
Sbjct: 229 -IQSIDCLKETG-----CIVSVPTITAGRVIEVAKQKHRRAFGLLK-QFNIEEL------ 275
Query: 327 RWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
                         + K +   +++  I   +   E  TA E ++ GH+RGK++ 
Sbjct: 276 ------------HYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVF 318

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 25/201 (12%)
Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
           N+  P  K  ++LV+++++SVNP+D               R ++          P  LG 
Sbjct: 24  NLDIPEPKVHEILVKIQSISVNPVDTKQ------------RLMDVSKA------PRVLGF 65
Query: 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGV 165
           D  G + + G  VT  N  D+VY    P + GS ++  L +  LV K P NIS E+A  +
Sbjct: 66  DAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSL 125
Query: 166 LYTGLTAWSALQITAALGLVYPRD----KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS 221
             TG+TA+  L      G+   R+    K +L++  +GGVG++A Q+ KA+ + V+TT S
Sbjct: 126 PLTGITAYETL--FDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS 183
Query: 222 -GDAKDLVTSLNPNLVIDYNE 241
             +  +    +  ++V+++ E
Sbjct: 184 RNETIEWTKKMGADIVLNHKE 204

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 31/209 (14%)
Query: 50  PILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG 109
           P     D+LVE+KAVSVNP+D              +R+    S  P       +G D  G
Sbjct: 48  PAPAGHDILVEVKAVSVNPVDY------------KVRR----STPPDGTDWKVIGYDAAG 91
Query: 110 KIVAKGPRVTDLNIDDVVY---GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVL 166
            + A GP VT     D V+    +I+P   G+ ++  L D  +V +KP  +   EAA + 
Sbjct: 92  IVSAVGPDVTLFRPGDEVFYAGSIIRP---GTNAEFHLVDERIVGRKPKTLDWAEAAALP 148
Query: 167 YTGLTAWSA----LQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCS 221
            T +TAW A    L +   +    P    +L++G +GGVG++AVQ+ +   D+ V+ T S
Sbjct: 149 LTSITAWEAFFDRLDVNKPVPGAAP---AILIVGGAGGVGSIAVQIARQRTDLTVIATAS 205
Query: 222 G-DAKDLVTSLNPNLVIDYNEPEAMHSIA 249
             + ++ V SL  + VID+++P A    A
Sbjct: 206 RPETQEWVKSLGAHHVIDHSKPLAAEVAA 234

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 151/362 (41%), Gaps = 53/362 (14%)
Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A ++  +GG + L+   ++  PI K   VL+++ A  VNP++  +  G            
Sbjct: 32  AVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSG------------ 79
Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
            T S +P+L  P T G D  G I A G   +     D V+        G +++  LA   
Sbjct: 80  -TYSRKPLL--PYTPGSDVAGVIEAVGDNASAFKKGDRVF--TSSTISGGYAEYALAADH 134
Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            V+K P  +  ++ A +     TA+ AL  +A +       + VLV GASGGVG  A Q+
Sbjct: 135 TVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACV----KAGESVLVHGASGGVGLAACQI 190
Query: 209 LKAWDIEVVTTC-SGDAKDLVTSLNPNLVIDYNEPEAMHSI---AGAGPYDVILDAAGIP 264
            +A+ ++++ T  + + + +V     + V ++ E   +  I    G    D+I++     
Sbjct: 191 ARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM---- 246
Query: 265 LDQIN--SYLPFLKTGKFSKFVTLRSPFLKN-TDSLGLVPGLVK-NAFDLLKSNFESGEL 320
           L  +N    L  L  G     V  R     N  D++     ++    F   K  F+    
Sbjct: 247 LANVNLSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQ--- 303
Query: 321 CKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGH-LRGKI 379
                          YA   +   +E G +KPVI S+Y   ++  A E +  G    GK+
Sbjct: 304 ---------------YAAA-LQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKM 347
Query: 380 IL 381
           IL
Sbjct: 348 IL 349

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 39  DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE 98
           DE+   +    P+L    V V ++AV++NP D +M G +                     
Sbjct: 21  DEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFAT------------------- 61
Query: 99  FPLT-LGRDFCGKIVAKGPRVTDLNIDDVVYGV-----IQPHKQGSFSKLILADSALVHK 152
            P   LG D+ G +VA G  VT + + D VYG       +   QG+FS+  +    +  K
Sbjct: 62  -PWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAK 120
Query: 153 KPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP-----------RDKRVLVLGASGGV 201
            P  +S E+AA +     TA  A+++   LGL  P           +   VLV G S   
Sbjct: 121 IPKGLSFEQAAALPAGISTAGLAMKL---LGLPLPSPSADQPPTHSKPVYVLVYGGSTAT 177
Query: 202 GTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSI 248
            T+ +Q+L+      + TCS    DL  S     V DY  P    +I
Sbjct: 178 ATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTI 224

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 48/259 (18%)
Query: 32  ISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETC 91
           + + GG + L+  D +  P    K+V V +KA ++N +DV +  G  +            
Sbjct: 6   MRARGGPEVLEVAD-LPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS------------ 52
Query: 92  SVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV------------------------ 127
              P L  P  LG D  G + A GP V      D V                        
Sbjct: 53  ---PKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPR 109
Query: 128 YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP 187
           Y ++  H+ G++++ ++   A +  KP N+S EEAA +  T LTAW    +   LG V P
Sbjct: 110 YQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQ--MVVDKLG-VRP 166
Query: 188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLVIDYNEPE--- 243
            D  VLV+ A  GV   A+Q+ K +   V+ T  S D      +L  +  ++Y  P+   
Sbjct: 167 GDD-VLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPK 225
Query: 244 AMHSIAGAGPYDVILDAAG 262
            +  + G    D ++D  G
Sbjct: 226 EVRRLTGGKGADKVVDHTG 244

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 93/227 (40%), Gaps = 40/227 (17%)
Query: 39  DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE 98
           DE+   +    P+L    V V ++AV++NP D  M G +                     
Sbjct: 21  DEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTKMRGQFAT------------------- 61
Query: 99  FPLT-LGRDFCGKIVAKGPRVTDLNIDDVVYGV-----IQPHKQGSFSKLILADSALVHK 152
            P   LG D+ G +VA G  VT + + D VYG       +   QG+FS+  +    +  K
Sbjct: 62  -PWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAK 120
Query: 153 KPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP-----------RDKRVLVLGASGGV 201
            P  +S E+AA +     TA  A+++   LGL  P           +   VLV G S   
Sbjct: 121 IPKGLSFEQAAALPAGISTAGLAMKL---LGLPLPSPSADQPPTHSKPVYVLVYGGSTAT 177
Query: 202 GTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSI 248
            T+ +Q+L+      + TCS    DL  S     V DY  P    +I
Sbjct: 178 ATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTI 224

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 152/366 (41%), Gaps = 67/366 (18%)
Query: 30  WQISSY--GGADELQFNDN-VKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSL 85
           W++ +   G  D L   D    T  L   +V + M+A  VN  D  + LG Y  V     
Sbjct: 211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGVA---- 266
Query: 86  RQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILA 145
                           +LG +  G +V  GP VT L   D V G+I      +F  L +A
Sbjct: 267 ----------------SLGSEGAGVVVETGPGVTGLAPGDRVMGMIPK----AFGPLAVA 306
Query: 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMA 205
           D  +V + P+  S   AA V    LTA+ AL   A L    P +  +LV  A+GGVG  A
Sbjct: 307 DHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGL---RPGES-LLVHSAAGGVGMAA 362
Query: 206 VQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYN---EPEAMHSIAGAGPYDVILDA-A 261
           +QL +    EV  T S D    V     +L        E + + +  G G  DV+L++ A
Sbjct: 363 IQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRG-VDVVLNSLA 421
Query: 262 GIPLDQINSYLP----FLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFES 317
           G   D     LP    FL+ GK      +R P ++  D+    PG+   AFD +++  + 
Sbjct: 422 GEFADASLRMLPRGGRFLELGK----TDVRDP-VEVADAH---PGVSYQAFDTVEAGPQR 473
Query: 318 -GELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLR 376
            GE+                 + E+ +  E   ++P+  + ++  + P A   + Q    
Sbjct: 474 IGEM-----------------LHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHV 516
Query: 377 GKIILN 382
           GK++L 
Sbjct: 517 GKLVLT 522

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 137/355 (38%), Gaps = 40/355 (11%)
Query: 32  ISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETC 91
           + S+GG D          P+    +VLV  +A+ VN  D+A   G               
Sbjct: 34  LKSFGGPDVXVIGKR-PLPVAGEGEVLVRAEAIGVNRPDIAQRQG--------------- 77
Query: 92  SVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVH 151
           S  P  +    LG +  G+IV  GP V+   + D V G+      G++++  L  +  + 
Sbjct: 78  SYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN---GGAYAEYCLLPAGQIL 134
Query: 152 KKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA 211
             P      +AA +  T  T W+ L   A L       + VL+ G + G+GT A+QL +A
Sbjct: 135 PFPKGYDAVKAAALPETFFTVWANLFQXAGL----TEGESVLIHGGTSGIGTTAIQLARA 190
Query: 212 WDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPE---AMHSIAGAGPYDVILDAAGIPLDQ 267
           +  EV  T     K +    L     I+Y   +    + +  G G  D+ILD  G    +
Sbjct: 191 FGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQG-VDIILDXIGAAYFE 249
Query: 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR 327
            N      K G  S    L     +  +   L P  VK    +  S        +   IR
Sbjct: 250 RN-IASLAKDGCLSIIAFLGGAVAEKVN---LSPIXVKR-LTVTGSTXRPRTAEEKRAIR 304
Query: 328 WGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
                     + E+   +E G + PVI   + F ++  A   +++G   GK+ L 
Sbjct: 305 DDL-------LSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVXLT 352

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 40/319 (12%)
Query: 57  VLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGP 116
           VLV+++A   NP+D  +  G        L              P  LG D  G +VA GP
Sbjct: 35  VLVQIEASGTNPLDAKIRAGEAPHAQQPL--------------PAILGXDLAGTVVAVGP 80
Query: 117 RVTDLNIDDVVYGVIQ--PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWS 174
            V    + D V+G+       QG+ ++    D+ L+  KP+ ++  +A+ +    +TAW 
Sbjct: 81  EVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWE 140
Query: 175 ALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPN 234
            L   A +       + VL+ G  GGVG +A+Q+  A    V  T  G   + V  L   
Sbjct: 141 GLVDRAQV----QDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGAT 196
Query: 235 LVIDYNEPE--AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLK 292
            +    EPE  A    AG G +D++ D  G P+   +    F    +F   V+       
Sbjct: 197 PIDASREPEDYAAEHTAGQG-FDLVYDTLGGPVLDAS----FSAVKRFGHVVS------- 244
Query: 293 NTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP 352
               LG   G  K A    K    SG       +           ++E +  ++ G++ P
Sbjct: 245 ---CLGW--GTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEXLREADALVQTGKLAP 299
Query: 353 VIDSK-YNFCELPTAFEKV 370
            +D + ++  E+ +A++ V
Sbjct: 300 RLDPRTFSIAEIGSAYDAV 318

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Query: 32  ISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETC 91
           I   GG D +++ D    P +  +++L++ K   VN I+     G           +  C
Sbjct: 14  IDEIGGYDVIKYED-YPVPSISEEELLIKNKYTGVNYIESYFRKG-----------IYPC 61
Query: 92  SVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVH 151
                 E P  LGR+  G +VAKG  VT+  + D V   I       +SK  ++    V 
Sbjct: 62  ------EKPYVLGREASGTVVAKGKGVTNFEVGDQV-AYISNSTFAQYSK--ISSQGPVM 112
Query: 152 KKPSNISDEE----AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
           K P   SDEE    AAG+    L   +AL  T     V   D  VL+  A+GGVG +  Q
Sbjct: 113 KLPKGTSDEELKLYAAGL----LQVLTALSFTNEAYHVKKGD-YVLLFAAAGGVGLILNQ 167
Query: 208 LLKAWDIEVVTTCSGDAK 225
           LLK      +   S D K
Sbjct: 168 LLKMKGAHTIAVASTDEK 185

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 47/219 (21%)
Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
            V+ P +   +VLV +KA  V   D+    G                V+P L  PL  G 
Sbjct: 17  EVEKPTISYGEVLVRIKACGVCHTDLHAAHG-------------DWPVKPKL--PLIPGH 61
Query: 106 DFCGKIVAKGPRVTDLNIDDVV------------------YGVIQPHKQ-------GSFS 140
           +  G +   GP VT L + D V                     +  H++       G ++
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYA 121
Query: 141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGG 200
           +   A +  V K P N+S EEAA +   G+T + AL++T A      +    + +   GG
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA------KPGEWVAIYGIGG 175
Query: 201 VGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVID 238
           +G +AVQ  KA  + VV    GD K +L   L  +LV++
Sbjct: 176 LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVN 214

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 47/219 (21%)
Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
            V+ P +   +VLV +KA  V   D+    G                V+P L  PL  G 
Sbjct: 17  EVEKPTISYGEVLVRIKACGVCHTDLHAAHG-------------DWPVKPKL--PLIPGH 61
Query: 106 DFCGKIVAKGPRVTDLNIDDVV------------------YGVIQPHKQ-------GSFS 140
           +  G +   GP VT L + D V                     +  H++       G ++
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYA 121
Query: 141 KLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGG 200
           +   A +  V K P N+S EEAA +   G+T + AL++T A      +    + +   GG
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA------KPGEWVAIYGIGG 175
Query: 201 VGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVID 238
            G +AVQ  KA  + VV    GD K +L   L  +LV++
Sbjct: 176 FGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVN 214

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 32/214 (14%)
Query: 56  DVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKG 115
           ++ VE KA+ +N ID  +  G                + P    P  LG +  G +   G
Sbjct: 30  EIQVENKAIGINFIDTYIRSG----------------LYPPPSLPSGLGTEAAGIVSKVG 73
Query: 116 PRVTDLNIDDVVYGVIQPHKQGSFSKL--ILADSALVHKKPSNISDEEAAGVLYTGLTAW 173
             V  +   D V  V      G++S +  I+AD A +   P+ IS E+AA     GLT +
Sbjct: 74  SGVKHIKAGDRV--VYAQSALGAYSSVHNIIADKAAI--LPAAISFEQAAASFLKGLTVY 129
Query: 174 SALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNP 233
             L+ T  +      D++ L   A+GGVG +A Q  KA   +++ T  G A+   ++L  
Sbjct: 130 YLLRKTYEI----KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV-GTAQKAQSALKA 184
Query: 234 NL--VIDYNEP---EAMHSIAGAGPYDVILDAAG 262
               VI+Y E    E +  I G     V+ D+ G
Sbjct: 185 GAWQVINYREEDLVERLKEITGGKKVRVVYDSVG 218

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 133/359 (37%), Gaps = 71/359 (19%)
Query: 50  PILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCG 109
           P     D++V   AVS+N  D         +VL +   L+       L FP     D  G
Sbjct: 49  PEAGEHDIIVRTLAVSLNYRD--------KLVLETGXGLD-------LAFPFVPASDXSG 93
Query: 110 KIVAKGPRVTDLNIDDVVYGVIQP---------------------HKQGSFSKLILADSA 148
            + A G  VT     D V     P                        G  S+ ++    
Sbjct: 94  VVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEG 153
Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
                P ++   EA+ +   GLTAW AL     L     R    +V+  +GGV    +Q+
Sbjct: 154 WFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHL-----RAGDRVVVQGTGGVALFGLQI 208
Query: 209 LKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILD-AAGI 263
            KA   EV+ T S   K D   +L  +  I+  E    E ++++ G    D IL+ A G 
Sbjct: 209 AKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGA 268
Query: 264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT 323
            L Q  S       G+ S                      V    +  + +   G L   
Sbjct: 269 GLGQ--SLKAVAPDGRIS----------------------VIGVLEGFEVSGPVGPLLLK 304
Query: 324 NTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
           + +  G  +    A++++   ++R  +KPVID +Y F E+P A   + +G   GK+++ 
Sbjct: 305 SPVVQGISVGHRRALEDLVGAVDRLGLKPVIDXRYKFTEVPEALAHLDRGPF-GKVVIE 362

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 39  DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE 98
           + +  + +   P+    D+LV  + V VN  D+    G                 +P ++
Sbjct: 17  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAG---------------RYDPSVK 61
Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNIS 158
            P  +G +  G++VA G   +           + P   GSF++  +  +++    PS   
Sbjct: 62  PPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP---GSFAEYTVVPASIATPVPS--V 116
Query: 159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT 218
             E   +L +G TA+ +L+    L       K+VLV  A+GG G  A+QL K     V+ 
Sbjct: 117 KPEYLTLLVSGTTAYISLKELGGLS----EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 172
Query: 219 TCSGDAKD-LVTSLNPNLVIDY-NEP 242
           TCS D K   + SL  +  I+Y  EP
Sbjct: 173 TCSSDEKSAFLKSLGCDRPINYKTEP 198

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 39  DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE 98
           + +  + +   P+    D+LV  + V VN  D+    G                 +P ++
Sbjct: 38  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAG---------------RYDPSVK 82
Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNIS 158
            P  +G +  G++VA G   +           + P   GSF++  +  +++    PS   
Sbjct: 83  PPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP---GSFAEYTVVPASIATPVPS--V 137
Query: 159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT 218
             E   +L +G TA+ +L+    L       K+VLV  A+GG G  A+QL K     V+ 
Sbjct: 138 KPEYLTLLVSGTTAYISLKELGGLS----EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 193
Query: 219 TCSGDAKD-LVTSLNPNLVIDY-NEP 242
           TCS D K   + SL  +  I+Y  EP
Sbjct: 194 TCSSDEKSAFLKSLGCDRPINYKTEP 219

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 39  DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE 98
           + +  + +   P+    D+LV  + V VN  D+    G                 +P ++
Sbjct: 46  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAG---------------RYDPSVK 90
Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNIS 158
            P  +G +  G++VA G   +           + P   GSF++  +  +++    PS   
Sbjct: 91  PPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP---GSFAEYTVVPASIATPVPS--V 145
Query: 159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT 218
             E   +L +G TA+ +L+    L       K+VLV  A+GG G  A+QL K     V+ 
Sbjct: 146 KPEYLTLLVSGTTAYISLKELGGLS----EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 201
Query: 219 TCSGDAKD-LVTSLNPNLVIDY-NEP 242
           TCS D K   + SL  +  I+Y  EP
Sbjct: 202 TCSSDEKSAFLKSLGCDRPINYKTEP 227

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 43/194 (22%)
Query: 45  DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGG-YGNVVLNSLRQLETCSVEPVLEFPLTL 103
           +++  P  K   VL++++A  V   DV M  G +GN     LR +E   V+     P+TL
Sbjct: 16  EDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGN-----LRIVEDLGVK----LPVTL 66
Query: 104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQP--------------------------HKQG 137
           G +  G+I   G  V   +  D+V   + P                          +  G
Sbjct: 67  GHEIAGRIEEVGDEVVGYSKGDLV--AVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDG 124
Query: 138 SFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGA 197
           ++++ +L        K   +S  EAA +  +G+T + A++  A+L       K ++V+GA
Sbjct: 125 AYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVR-KASL----DPSKTLVVIGA 179
Query: 198 SGGVGTMAVQLLKA 211
            GG+GTMA+Q+ KA
Sbjct: 180 GGGLGTMAIQIAKA 193

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 31  QISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLET 90
           Q S+ GG + L++ D  +      + V+V  KA+ +N ID     G              
Sbjct: 6   QFSTVGGPEVLEYVD-FEPEAPGPQAVVVRNKAIGLNFIDTYYRSG-------------- 50
Query: 91  CSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD-VVYGVIQPHKQGSFSKLILADSAL 149
             + P    P  LG +  G + A G  VT   + D V YG       G++S++ +   A 
Sbjct: 51  --LYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGT---GPLGAYSEVHVLPEAN 105
Query: 150 VHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLL 209
           + K   ++S E+AA ++  GLT    L+ T     V P +  +L   A+GGVG++A Q  
Sbjct: 106 LVKLADSVSFEQAAALMLKGLTVQYLLRQTYQ---VKPGEI-ILFHAAAGGVGSLACQWA 161
Query: 210 KAWDIEVVTTCSGDAKDL-VTSLNPNLVIDYNEPEAMHSI 248
           KA   +++ T S   K     +L     IDY+  +    +
Sbjct: 162 KALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRV 201

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 23/214 (10%)
Query: 52  LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKI 111
           L   DV V++   S+N  D   + G G ++ N               FP+  G DF G +
Sbjct: 46  LPEGDVTVDVHWSSLNYKDALAITGKGKIIRN---------------FPMIPGIDFAGTV 90
Query: 112 -VAKGPRV-TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTG 169
             ++ PR      +    +GV + H  G   +  +    LV   P  +   +A  +   G
Sbjct: 91  RTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLV-AMPQGLDARKAMIIGTAG 149
Query: 170 LTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV 228
            TA   +      G V P+D  ++V GASGGVG+ AV LL     +VV     ++  + +
Sbjct: 150 FTAMLCVMALEDAG-VRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 208
Query: 229 TSLNPNLVI---DYNEPEAMHSIAGAGPYDVILD 259
            SL  + V+   ++ E   +     AG  D + D
Sbjct: 209 KSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGD 242

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 96  VLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPS 155
           V E P+ +G +    +   GP VTD  + + V   + P    S  +L  A+  +   K  
Sbjct: 57  VGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDL 116
Query: 156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE 215
           ++ D   AG++  G+TA   L  T     V P D  VL+  A+GG+G + V   +     
Sbjct: 117 DLDDVHLAGLMLKGMTAQYLLHQTHK---VKPGD-YVLIHAAAGGMGHIMVPWARHLGAT 172
Query: 216 VVTTCSGDAK-DLVTSLNPNLVIDYNE---PEAMHSIAGAGPYDVILDAAG 262
           V+ T S + K +    L  +  I+Y+     E +  I G    DV+ D+ G
Sbjct: 173 VIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIG 223

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 121/314 (38%), Gaps = 55/314 (17%)
Query: 97  LEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ--------------------PH-- 134
           ++ PL  G +  G +V  G  V    I D  Y  I+                    PH  
Sbjct: 58  VKLPLVGGHEGAGVVVGMGENVKGWKIGD--YAGIKWLNGSCMACEYCELGNESNCPHAD 115
Query: 135 -----KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRD 189
                  GSF +   AD+      P      + A +L  G+T + AL+    +       
Sbjct: 116 LSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMA-----G 170
Query: 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSI 248
             V + GA+GG+G++AVQ  KA    V+    G+ K +L  S+   + ID+ + +    I
Sbjct: 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEK---DI 227
Query: 249 AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF 308
            GA    V+    G     IN  +        +++V         T  L  +P   K   
Sbjct: 228 VGA----VLKATDGGAHGVINVSVSEAAIEASTRYVRAN-----GTTVLVGMPAGAKCCS 278
Query: 309 DLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFE 368
           D+        ++ K+ +I  G ++      +E   F  RG +K  I        LP  +E
Sbjct: 279 DVFN------QVVKSISIV-GSYVGNRADTREALDFFARGLVKSPIKV-VGLSTLPEIYE 330
Query: 369 KVQQGHLRGKIILN 382
           K+++G + G+ +++
Sbjct: 331 KMEKGQIVGRYVVD 344

>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 52  LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKI 111
           L + DV V++   S+N  D   + G G ++ +               FP   G DF G +
Sbjct: 25  LPAGDVTVDVHWSSLNYKDALAITGKGKIIRH---------------FPXIPGIDFAGTV 69
Query: 112 VA-KGPRV-TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTG 169
            A + PR      +    +GV + H  G   +  +    LV   P+ +S   A  +   G
Sbjct: 70  HASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLV-ALPAGLSSRNAXIIGTAG 128
Query: 170 LTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLV 228
            TA   +      G + P+D  V+V GASGGVG+ AV LL     +V      ++    +
Sbjct: 129 FTAXLCVXALEDAG-IRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL 187
Query: 229 TSLNPNLVI---DYNEPEAMHSIAGAGPYDVILD 259
            SL  N ++   ++ E   +     AG  D + D
Sbjct: 188 KSLGANRILSRDEFAESRPLEKQLWAGAIDTVGD 221

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 147 SALVHKKPSNISDEEAA--GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTM 204
           S LV   P  ++D EAA  GV Y  LTAW +L     +G + P  +RVL+  A+GGVG  
Sbjct: 1   SDLVVPIPDTLADNEAATFGVAY--LTAWHSL---CEVGRLSP-GERVLIHSATGGVGMA 54
Query: 205 AVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVID 238
           AV + K     + TT   DAK ++++ L    V D
Sbjct: 55  AVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGD 89

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 137 GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG 196
           G F++ ++AD   V   P NI   E A VL  G+T +  L++T       P D   +V+ 
Sbjct: 143 GGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTD----TKPGDW--VVIS 196
Query: 197 ASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVID 238
             GG+G MAVQ  +A  + V      D K DL   L   + ++
Sbjct: 197 GIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVN 239

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 137 GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG 196
           G +++ +LAD   V   P N+   E A +L  G+T +  L+ T A      R  + + + 
Sbjct: 124 GGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNA------RPGQWVAIS 177
Query: 197 ASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSI 248
             GG+G +AVQ  +A  + V      DAK +L   L  +L ++  + + + +I
Sbjct: 178 GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAI 230

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVV------------------------YGVIQPH 134
           +P+TLG +F G I A G  V DL+  D V                        Y  I   
Sbjct: 53  YPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR 112
Query: 135 KQGSFSKLILADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLVYPRDKRV 192
           + G F++ I+     V   P+++  E+ A +  +  GL A+   Q           +K V
Sbjct: 113 RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGC--------ENKNV 164
Query: 193 LVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE----AMHSI 248
           +++GA G +G +A+Q   A   + VT     ++ L  + +   +  +N  E     M S+
Sbjct: 165 IIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSV 223
Query: 249 AGAGPYD-VILDAAGIP 264
                ++ +IL+ AG+P
Sbjct: 224 LRELRFNQLILETAGVP 240

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 156/383 (40%), Gaps = 66/383 (17%)
Query: 24  STRTAAWQISSYGGADELQ-FNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
           S    A  ++ +GG ++L+ F   +  P  +  ++ + +KA  +N ID+ +  G      
Sbjct: 1   SMEMRAVVLAGFGGLNKLRLFRKAMPEP--QDGELKIRVKACGLNFIDLMVRQG------ 52
Query: 83  NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
                    +++   + PL  G +  G + A G  V    I D V   +  +   +++++
Sbjct: 53  ---------NIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYN---AWAEV 100
Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
           +      V+K P ++S  EAA      +TA+  L   A L         VLV  A GGVG
Sbjct: 101 VCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANL----REGMSVLVHSAGGGVG 156
Query: 203 TMAVQLLKAW-DIEVVTTCSG----DAKDLVTSLNPNLVIDYNEP--EAMHSIAGAGPYD 255
               QL     ++ V  T S       KD VT L      D N    + +  I+  G  D
Sbjct: 157 QAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHL-----FDRNADYVQEVKRISAEG-VD 210
Query: 256 VILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF 315
           ++LD   +  D     L  LK         L +  L  + ++  V G  K+ F   KS +
Sbjct: 211 IVLDC--LCGDNTGKGLSLLKP--------LGTYILYGSSNM--VTGETKSFFSFAKSWW 258
Query: 316 ESGE-----LCKTNTIRWGFFMP-----------IPYAVKEINKFIERGQIKPVIDSKYN 359
           +  +     L + N +  GF +            I   V+++     + +IKPV+DS + 
Sbjct: 259 QVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWA 318
Query: 360 FCELPTAFEKVQQGHLRGKIILN 382
             E+  A +++      GK+IL+
Sbjct: 319 LEEVKEAMQRIHDRGNIGKLILD 341

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 45  DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104
           ++V  P L + D+LV+ +A+ +NP+D   +    N +  S   +               G
Sbjct: 20  NSVDIPALAADDILVQNQAIGINPVDWKFIKA--NPINWSNGHVP--------------G 63
Query: 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAG 164
            D  G IV  G +V    +   V       + GSF++  + ++  V   P N+S E AA 
Sbjct: 64  VDGAGVIVKVGAKVDSKXLGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAA 123
Query: 165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLG 196
           +    LTAW A +      +   + + VL++G
Sbjct: 124 LPCPLLTAWQAFE-----KIPLTKQREVLIVG 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	383
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-114
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	5e-73
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	3e-65
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	8e-65
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-60
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-58
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-57
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	4e-49
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-47
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	4e-47
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	5e-47
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-46
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	7e-45
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-44
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-42
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-42
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	1e-41
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	9e-41
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	6e-36
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-35
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-35
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	5e-35
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-34
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	3e-34
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	5e-34
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	4e-33
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	9e-33
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-32
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	4e-30
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	3e-20
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-19
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	8e-18
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-15
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-15
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	2e-15
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	3e-15
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	4e-15
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	4e-15
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	6e-15
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	6e-15
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-15
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	7e-15
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	9e-15
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-14
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	8e-14
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-13
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	3e-13
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	6e-13
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-12
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	2e-12
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-11
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	1e-09
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-09
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	7e-08
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-07
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	4e-05
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	7e-05
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	7e-04

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  336 bits (864), Expect = e-114
 Identities = 134/355 (37%), Positives = 190/355 (53%), Gaps = 6/355 (1%)

Query: 29  AWQISSYGGADELQFNDNVKTPILK-SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
           AW I  YG  + L+F  N+  PI+    +V+V++ A SVNPIDV M  GYG   LN  R 
Sbjct: 24  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                ++   EFPLTLGRD  G ++  G  V      D V+  + P KQG+ S+ ++   
Sbjct: 84  PLHVKIKGE-EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSG 142

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             V  KP +++  +AA + Y  LTAWSA+     L       KRVL+LGASGGVGT A+Q
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202

Query: 208 LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267
           ++KAWD  V   CS DA +LV  L  + VIDY        +    P+D ILD  G     
Sbjct: 203 VMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG--ST 260

Query: 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR 327
                 FLK    + +VTL +PFL N D LG+  G+++    +     +     K    R
Sbjct: 261 ETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKH--FWKGVHYR 318

Query: 328 WGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
           W FFM     + +I + ++ G+I+PVI+  + F ++P AF KV++GH RGK ++N
Sbjct: 319 WAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  229 bits (586), Expect = 5e-73
 Identities = 81/355 (22%), Positives = 139/355 (39%), Gaps = 45/355 (12%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A Q   +G    L+  D   TP  +   +L+++ A S+NPID     G G V        
Sbjct: 9   AIQFDQFGPPKVLKLVD-TPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAK------ 61

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-PHKQGSFSKLILADS 147
                +     P  LG DF G+++  G  V ++NI D V G+   P     +++ + A  
Sbjct: 62  -----KLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASP 116

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             + +K   +S  +AA +   GLTA  AL   A +     +   VL+   +GGVG +A+Q
Sbjct: 117 DTIIQKLEKLSFLQAASLPTAGLTALQALN-QAEVK----QGDVVLIHAGAGGVGHLAIQ 171

Query: 208 LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267
           L K     V+TT S      + +L     I+Y+E + + +I  + P D ++D  G   D 
Sbjct: 172 LAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAI--STPVDAVIDLVG--GDV 227

Query: 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR 327
               +  LK       V++ +        +                              
Sbjct: 228 GIQSIDCLKET--GCIVSVPTITAGRVIEVAKQKHR---------------------RAF 264

Query: 328 WGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
                     +  + K +   +++  I   +   E  TA E ++ GH+RGK++  
Sbjct: 265 GLLKQFNIEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFK 319

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  208 bits (533), Expect = 3e-65
 Identities = 64/355 (18%), Positives = 118/355 (33%), Gaps = 45/355 (12%)

Query: 29  AWQISSYGG-ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
             Q+ +Y      +  N  V  P L + D+LV+ +A+ +NP+D   +             
Sbjct: 4   QHQVWAYQTKTHSVTLNS-VDIPALAADDILVQNQAIGINPVDWKFIKANP--------- 53

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                           G D  G IV  G +V    +   V       + GSF++  + ++
Sbjct: 54  -------INWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNT 106

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             V   P N+S E AA +    LTAW A +    + L   + + VL++G  G V  +  Q
Sbjct: 107 DRVMTLPDNLSFERAAALPCPLLTAWQAFEK---IPL--TKQREVLIVGF-GAVNNLLTQ 160

Query: 208 LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ 267
           +L      V    +  ++ L        +                 Y  I DA       
Sbjct: 161 MLNNAGYVVDLVSASLSQALAAKRGVRHLYREPSQV-------TQKYFAIFDAVNS--QN 211

Query: 268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR 327
             + +P LK       + ++           + P   +                  +   
Sbjct: 212 AAALVPSLKAN--GHIICIQDR-----IPAPIDPAFTRTIS--YHEIALGALHDFGDRQD 262

Query: 328 WGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
           W   M      + +   I +G+++      + F ++  A +  +Q  L+  + LN
Sbjct: 263 WQILMQQ---GEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSEQTKLKTVLTLN 314

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  209 bits (533), Expect = 8e-65
 Identities = 71/370 (19%), Positives = 144/370 (38%), Gaps = 54/370 (14%)

Query: 29  AWQISSYGGADE---LQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSL 85
           A          +    +  + +  P  K  ++LV+++++SVNP+D               
Sbjct: 5   AIGFEQPFKLSDGNLFKTFN-LDIPEPKVHEILVKIQSISVNPVDTKQRLMD-------- 55

Query: 86  RQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILA 145
                     V + P  LG D  G + + G  VT  N  D+VY    P + GS ++  L 
Sbjct: 56  ----------VSKAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLI 105

Query: 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRD--KRVLVLGASGGVGT 203
           +  LV K P NIS E+A  +  TG+TA+  L     +      +  K +L++  +GGVG+
Sbjct: 106 NERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGS 165

Query: 204 MAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP--EAMHSIAGAGPYDVILDA 260
           +A Q+ KA+ + V+TT S +   +    +  ++V+++ E       +       D +   
Sbjct: 166 IATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIEL-VDYVFCT 224

Query: 261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNA-----FDLLKSNF 315
                   +  +  +K        T+ +      +   L     K+      F   +   
Sbjct: 225 FNTD-MYYDDMIQLVK--PRGHIATIVAF----ENDQDLNALKPKSLSFSHEFMFARPLN 277

Query: 316 ESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVID---SKYNFCELPTAFEKVQQ 372
           ++ ++ K +             +++I   +E+   +P             +  A + ++ 
Sbjct: 278 QTDDMIKHHEY-----------LEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILES 326

Query: 373 GHLRGKIILN 382
             + GK+++N
Sbjct: 327 NTMIGKLVIN 336

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  198 bits (506), Expect = 1e-60
 Identities = 76/368 (20%), Positives = 143/368 (38%), Gaps = 51/368 (13%)

Query: 29  AWQISSYGGADE-LQFND-NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLR 86
           A   +      +     D  +  P     D+LVE+KAVSVNP+D  +             
Sbjct: 25  AVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTP-------- 76

Query: 87  QLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILAD 146
                   P       +G D  G + A GP VT     D V+      + G+ ++  L D
Sbjct: 77  --------PDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVD 128

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL-GLVYPRDKRVLVLGASGGVGTMA 205
             +V +KP  +   EAA +  T +TAW A      +   V      +L++G +GGVG++A
Sbjct: 129 ERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIA 188

Query: 206 VQLLKAW-DIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP--EAMHSIAGAGPYDVILDAA 261
           VQ+ +   D+ V+ T S     + V SL  + VID+++P    + ++    P  V     
Sbjct: 189 VQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH 248

Query: 262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNA-----FDLLKSNFE 316
                        +      +F  +  P      +  ++    K           +  F 
Sbjct: 249 TD--KHAAEIADLIA--PQGRFCLIDDP-----SAFDIMLFKRKAVSIHHELMFTRPMFG 299

Query: 317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKY---NFCELPTAFEKVQQG 373
           + ++ +   +           + ++++ ++ G+++  + ++    N   L  A   V+ G
Sbjct: 300 TPDMSEQGRL-----------LNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESG 348

Query: 374 HLRGKIIL 381
             RGK+++
Sbjct: 349 TARGKVVI 356

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  192 bits (489), Expect = 3e-58
 Identities = 81/362 (22%), Positives = 139/362 (38%), Gaps = 47/362 (12%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +    G   L+    +  P      VLV+++A   NP+D  +  G            
Sbjct: 10  AAVVEEANGPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-------- 58

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI--QPHKQGSFSKLILAD 146
                      P  LG D  G +VA GP V    + D V+G+       QG+ ++    D
Sbjct: 59  ------AQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVD 112

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAV 206
           + L+  KP+ ++  +A+ +    +TAW  L   A +       + VL+ G  GGVG +A+
Sbjct: 113 ARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQ----DGQTVLIQGGGGGVGHVAI 168

Query: 207 QLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE--AMHSIAGAGPYDVILDAAGIP 264
           Q+  A    V  T  G   + V  L    +    EPE  A    AG G +D++ D  G  
Sbjct: 169 QIALARGARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQG-FDLVYDTLG-- 225

Query: 265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTN 324
              +++    +K       V+          +  L P   K A         SG      
Sbjct: 226 GPVLDASFSAVKRF--GHVVSCLGW-----GTHKLAPLSFKQA-------TYSGVFTLHT 271

Query: 325 TIRWGFFMPIPYAVKEINKFIERGQIKPVIDSK-YNFCELPTAFEKV----QQGHLRGKI 379
            +           ++E +  ++ G++ P +D + ++  E+ +A++ V         RGKI
Sbjct: 272 LLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKI 331

Query: 380 IL 381
            +
Sbjct: 332 AI 333

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  191 bits (486), Expect = 1e-57
 Identities = 80/381 (20%), Positives = 127/381 (33%), Gaps = 69/381 (18%)

Query: 28  AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ 87
            A  ++ +              P+L    V V ++AV++NP D +M G +          
Sbjct: 13  TALTVNDHDEVTVWN---AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA--------- 60

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP-----HKQGSFSKL 142
                          LG D+ G +VA G  VT + + D VYG           QG+FS+ 
Sbjct: 61  ----------TPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQY 110

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP-----------RDKR 191
            +    +  K P  +S E+AA +     TA  A++    LGL  P           +   
Sbjct: 111 TVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK---LLGLPLPSPSADQPPTHSKPVY 167

Query: 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSI--A 249
           VLV G S    T+ +Q+L+      + TCS    DL  S     V DY  P    +I   
Sbjct: 168 VLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTY 227

Query: 250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD 309
                   LD           +    + G    +V+L                +V   + 
Sbjct: 228 TKNNLRYALDCITNVESTTFCFAAIGRAG--GHYVSLNPF-----PEHAATRKMVTTDWT 280

Query: 310 LLKSNFESGELCKTNTIRWGFFMPIPYA----------VKEINKFIERGQIKPVIDSKY- 358
           L  + F  G         W      P +           +   + +E G++         
Sbjct: 281 LGPTIFGEG-------STWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQ 333

Query: 359 -NFCELPTAFEKVQQGHLRGK 378
             F  +    E V++G L G+
Sbjct: 334 GGFDHIKQGMELVRKGELSGE 354

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  168 bits (427), Expect = 4e-49
 Identities = 79/383 (20%), Positives = 138/383 (36%), Gaps = 75/383 (19%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQ 87
           A  + + GG + L+  D +  P    K+V V +KA ++N +DV +  G            
Sbjct: 3   AVVMRARGGPEVLEVAD-LPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS--------- 52

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV-------------------- 127
                  P L  P  LG D  G + A GP V      D V                    
Sbjct: 53  -------PKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDN 105

Query: 128 ----YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183
               Y ++  H+ G++++ ++   A +  KP N+S EEAA +  T LTAW  +     + 
Sbjct: 106 LCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVR 165

Query: 184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP 242
                   VLV+ A  GV   A+Q+ K +   V+ T   + K     +L  +  ++Y  P
Sbjct: 166 ----PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHP 221

Query: 243 ---EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKT-GKFSKFVTLRSPFLKNTDSLG 298
              + +  + G    D ++D  G         +      G+ +              +L 
Sbjct: 222 DWPKEVRRLTGGKGADKVVDHTG--ALYFEGVIKATANGGRIAIAGASSGY----EGTLP 275

Query: 299 LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKY 358
                 +                   +I  G  M     +  I +F+E G++KPV+    
Sbjct: 276 FAHVFYRQL-----------------SIL-GSTMASKSRLFPILRFVEEGKLKPVVGQVL 317

Query: 359 NFCELPTAFEKVQQGHLRGKIIL 381
                      +++  + GK++L
Sbjct: 318 PLEAAAEGHRLLEERRVFGKVVL 340

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  165 bits (420), Expect = 3e-47
 Identities = 79/398 (19%), Positives = 128/398 (32%), Gaps = 75/398 (18%)

Query: 32  ISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETC 91
           ++       L+  + V  P L   +VLV + A S+N   V           + L+Q    
Sbjct: 41  VADKDVRKSLRLGE-VPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQ 99

Query: 92  SVEPV--LEFPLTLGRDFCGKIVAKGPRVTDLNI-DDVVY-------------------- 128
                   +    LG D  G +V  G  V      D V+                     
Sbjct: 100 GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGT 159

Query: 129 ---GVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185
                      G  ++  +  ++ +  KP++++ EEAA       TA+  L ++     +
Sbjct: 160 EQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRML-VSDRGAQM 218

Query: 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE--- 241
              D  VL+ GASGG+G+ A+Q +K      V   S   K   V +L  +LVI+  E   
Sbjct: 219 KQGD-IVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGI 277

Query: 242 ------------------PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKF 283
                              + +   AG  P D++ +  G         +   + G     
Sbjct: 278 TDDIADDPRRVVETGRKLAKLVVEKAGREP-DIVFEHTG--RVTFGLSVIVARRG--GTV 332

Query: 284 VTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINK 343
           VT            G   G   + FD            K   I  G         +  N+
Sbjct: 333 VT-----------CGSSSG-YLHTFDNRYLWM------KLKKIV-GSHGANHEEQQATNR 373

Query: 344 FIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
             E G + P + + Y   E   A   VQ     GK+ +
Sbjct: 374 LFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAV 411

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  163 bits (414), Expect = 4e-47
 Identities = 73/407 (17%), Positives = 128/407 (31%), Gaps = 94/407 (23%)

Query: 9   SKVPVQLNKINHLKYSTRTAAWQISSYGGADE-LQFNDNVKTPILKSKDVLVEMKAVSVN 67
           S V +    +       R  A     +G   + ++  + ++   ++  DV V+M A  +N
Sbjct: 9   SGVDLGTENLYFQSMPARVRALVYGHHGDPAKVVELKN-LELAAVRGSDVRVKMLAAPIN 67

Query: 68  PIDVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDV 126
           P D+ M+ G YG              + P  E P   G +   ++VA G  VT L   D 
Sbjct: 68  PSDINMIQGNYG--------------LLP--ELPAVGGNEGVAQVVAVGSNVTGLKPGDW 111

Query: 127 VYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186
           V         G++    +     + + PS+I  + AA +     TA+  L     L    
Sbjct: 112 VIPANAGL--GTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQL---- 165

Query: 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-----DLVTSLNPNLVIDYNE 241
                V+   ++ GVG   +Q+  A  +  +             D + SL    VI   E
Sbjct: 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE 225

Query: 242 ---PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG 298
              PE  +         + L+  G               GK            +    L 
Sbjct: 226 LRRPEMKNFFKDMPQPRLALNCVG---------------GKS---------STELLRQLA 261

Query: 299 -----LVPGLVKNAFDLLKSNFESGE---------LCKTNTIRWGFFMPIPY-------- 336
                +  G              + +         + K   +R GF++            
Sbjct: 262 RGGTMVTYG------------GMAKQPVVASVSLLIFKDLKLR-GFWLSQWKKDHSPDQF 308

Query: 337 --AVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
              +  +   I RGQ+     S+    +  +A E   +  +  K IL
Sbjct: 309 KELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQIL 355

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  162 bits (413), Expect = 5e-47
 Identities = 78/370 (21%), Positives = 135/370 (36%), Gaps = 69/370 (18%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQ 87
           A ++  +GG + L+   ++  PI K   VL+++ A  VNP++  +  G Y          
Sbjct: 32  AVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS--------- 82

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                       P T G D  G I A G   +     D V+        G +++  LA  
Sbjct: 83  -------RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTIS--GGYAEYALAAD 133

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             V+K P  +  ++ A +     TA+ AL  +A +       + VLV GASGGVG  A Q
Sbjct: 134 HTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK----AGESVLVHGASGGVGLAACQ 189

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGI 263
           + +A+ ++++ T   +    +V     + V ++ E    + +    G    D+I++    
Sbjct: 190 IARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA- 248

Query: 264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSL---------GLVPGLVKNAFDLLKSN 314
                N  L                   K+   L         G    +  N  D +   
Sbjct: 249 -----NVNLS------------------KDLSLLSHGGRVIVVGSRGTIEINPRDTMAKE 285

Query: 315 FESGELCKTNTIRWGFFMPIPYA--VKEINKFIERGQIKPVIDSKYNFCELPTAFEKV-Q 371
                      +         +      +   +E G +KPVI S+Y   ++  A E +  
Sbjct: 286 ------SSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIH 339

Query: 372 QGHLRGKIIL 381
                GK+IL
Sbjct: 340 GSGATGKMIL 349

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  161 bits (410), Expect = 2e-46
 Identities = 91/400 (22%), Positives = 140/400 (35%), Gaps = 80/400 (20%)

Query: 13  VQLNKINHLKYSTRTA---AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPI 69
           V L   N    S  +     W   +     +L+  +    P     D++V   AVS+N  
Sbjct: 11  VDLGTENLYFQSMMSKWMQEWSTET-VAPHDLKLAE-RPVPEAGEHDIIVRTLAVSLNYR 68

Query: 70  DVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV- 127
           D  +L  G G                  L FP     D  G + A G  VT     D V 
Sbjct: 69  DKLVLETGMG----------------LDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVI 112

Query: 128 --------------------YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLY 167
                               Y  +     G  S+ ++         P ++   EA+ +  
Sbjct: 113 STFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPC 172

Query: 168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-D 226
            GLTAW AL     L        RV+V G  GGV    +Q+ KA   EV+ T S   K D
Sbjct: 173 AGLTAWFALVEKGHLR----AGDRVVVQGT-GGVALFGLQIAKATGAEVIVTSSSREKLD 227

Query: 227 LVTSLNPNLVIDYNEP----EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKT-GKFS 281
              +L  +  I+  E              G  D IL+ AG     +   L  +   G+ S
Sbjct: 228 RAFALGADHGINRLEEDWVERVYALTGDRGA-DHILEIAGG--AGLGQSLKAVAPDGRIS 284

Query: 282 KFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEI 341
               L         S  + P L+K+                   ++ G  +    A++++
Sbjct: 285 VIGVLEGF----EVSGPVGPLLLKSP-----------------VVQ-GISVGHRRALEDL 322

Query: 342 NKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
              ++R  +KPVID +Y F E+P A   + +G   GK+++
Sbjct: 323 VGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGPF-GKVVI 361

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  159 bits (404), Expect = 7e-45
 Identities = 73/401 (18%), Positives = 124/401 (30%), Gaps = 74/401 (18%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQ 87
           A   +      +    D+V  P L   + LV + A SVN   V   +    +      R 
Sbjct: 45  AGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY 104

Query: 88  LETCSVEPVLEFPL-TLGRDFCGKIVAKGPRVTDLNI-DDVV------------------ 127
                +    + P   +G D  G ++  GP V      D+VV                  
Sbjct: 105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTM 164

Query: 128 -----YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL 182
                         G  +++ L  S  +  KP ++S EEAA       TA+  L ++   
Sbjct: 165 LDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQL-VSRNG 223

Query: 183 GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE 241
             +   D  VL+ GASGG+G+ A Q   A     +   S   K ++  ++    +ID N 
Sbjct: 224 AGMKQGD-NVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNA 282

Query: 242 P---------------------EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKF 280
                                        G    D++ +  G   +   + +   + G  
Sbjct: 283 EGYRFWKDENTQDPKEWKRFGKRIRELTGGEDI-DIVFEHPGR--ETFGASVFVTRKG-- 337

Query: 281 SKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE 340
               T                G +   +D                I  G          E
Sbjct: 338 GTITT-----------CASTSGYMH-EYDNRYLWM------SLKRII-GSHFANYREAWE 378

Query: 341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
            N+ I +G+I P +   Y+  +   A   V +   +GK+ +
Sbjct: 379 ANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGV 419

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  155 bits (395), Expect = 2e-44
 Identities = 69/383 (18%), Positives = 122/383 (31%), Gaps = 80/383 (20%)

Query: 24  STRTAAWQISSYGGADE-LQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGG-YGNVV 81
           S      Q   +G   + LQ         LK  +V V M    +NP D+  + G Y    
Sbjct: 2   SLHGKLIQFHKFGNPKDVLQVEY-KNIEPLKDNEVFVRMLVRPINPSDLIPITGAYA--- 57

Query: 82  LNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSK 141
                          +  P   G +  G +   G  V+   I   V  +      G++ +
Sbjct: 58  -------------HRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGE---GTWQE 101

Query: 142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGV 201
            +   +  V   P +I D  AA +    LTAW     T  L     R+  +LV      +
Sbjct: 102 YVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNL----QRNDVLLVNACGSAI 157

Query: 202 GTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE---PEAMHSI-AGAGPYDV 256
           G +  QL +  +  ++     +   + +  L    VID +     E +  +  G G  D 
Sbjct: 158 GHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGA-DA 216

Query: 257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSL---------GLVPGLVKNA 307
            +D+ G               G             +   SL         GL+ G+  N 
Sbjct: 217 AIDSIG---------------GPD---------GNELAFSLRPNGHFLTIGLLSGIQVNW 252

Query: 308 FDLLKSNFESGELCKTNTIRWGFFMPIPY-------AVKEINKFIERGQIKPV-IDSKYN 359
            +++              I                   + + + +E  Q++ + + S Y 
Sbjct: 253 AEIVTKA------KVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYE 306

Query: 360 FCELPTAFEKVQQG-HLRGKIIL 381
             ++  A + VQ     +GK+ L
Sbjct: 307 LADVKAAVDVVQSAEKTKGKVFL 329

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  150 bits (381), Expect = 2e-42
 Identities = 77/376 (20%), Positives = 137/376 (36%), Gaps = 82/376 (21%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQ 87
           A Q  S  G + L + D V+TP      V+V++KA  V   D  M  G Y          
Sbjct: 24  AIQAQSLSGPEGLVYTD-VETPGAGPNVVVVDVKAAGVCFPDYLMTKGEY---------- 72

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                 +  +E P   G +  G + +     + +   D V         G +++ +    
Sbjct: 73  ------QLKMEPPFVPGIETAGVVRSAPE-GSGIKPGDRVMAFNF---IGGYAERVAVAP 122

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
           + +   P  + D EA  ++    T + A      L       + VLVLGA+GG+GT A+Q
Sbjct: 123 SNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLR----AGETVLVLGAAGGIGTAAIQ 178

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE--PEAMHSIAGAGPYDVILDAAGIP 264
           + K    +V+   +  A  + V S+  ++V+   E   +A+    G    D+++D  G  
Sbjct: 179 IAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIG-- 236

Query: 265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD--LLKSNFESGE--- 319
                        G           F     +L         A +  LL   F +G    
Sbjct: 237 -------------GPA---------FDDAVRTL---------ASEGRLLVVGFAAGGIPT 265

Query: 320 ------LCKTNTI---RWGFFMP-----IPYAVKEINKFIERGQIKPVIDSKYNFCELPT 365
                 L +  ++    WG F+      +      + K +  G ++P + ++    E   
Sbjct: 266 IKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQ 324

Query: 366 AFEKVQQGHLRGKIIL 381
           A +    G + GK++L
Sbjct: 325 ALQDFADGKVYGKMVL 340

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  150 bits (380), Expect = 3e-42
 Identities = 72/371 (19%), Positives = 130/371 (35%), Gaps = 54/371 (14%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQ 87
           A  ++ +GG ++L+       P  +  ++ + +KA  +N ID+ +  G            
Sbjct: 6   AVVLAGFGGLNKLRLFR-KAMPEPQDGELKIRVKACGLNFIDLMVRQGNID--------- 55

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                     + PL  G +  G + A G  V    I D V   +      ++++++    
Sbjct: 56  -------NPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVN---YNAWAEVVCTPV 105

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             V+K P ++S  EAA      +TA+  L   A L         VLV  A GGVG    Q
Sbjct: 106 EFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLR----EGMSVLVHSAGGGVGQAVAQ 161

Query: 208 LLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGAGPYDVILDAAGIPL 265
           L        V   +   K      +   + D N    + +  I+  G  D++LD      
Sbjct: 162 LCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEG-VDIVLDCLC--- 217

Query: 266 DQINSYLP-----------FLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSN 314
                              ++  G  +        F     S   V  +  N   L + N
Sbjct: 218 ---GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKV--NPIKLYEEN 272

Query: 315 FESGELCKTNTIRWGFFMPIPYAVKEINK----FIERGQIKPVIDSKYNFCELPTAFEKV 370
                +   + +   F       ++ + +       + +IKPV+DS +   E+  A +++
Sbjct: 273 ---KVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRI 329

Query: 371 QQGHLRGKIIL 381
                 GK+IL
Sbjct: 330 HDRGNIGKLIL 340

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  148 bits (376), Expect = 1e-41
 Identities = 85/377 (22%), Positives = 138/377 (36%), Gaps = 80/377 (21%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQ 87
              + S+GG D +        P+    +VLV  +A+ VN  D+A   G Y          
Sbjct: 31  FVDLKSFGGPDVMVIGK-RPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP--------- 80

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                  P  +    LG +  G+IV  GP V+   + D V G+      G++++  L  +
Sbjct: 81  -------PPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN---GGAYAEYCLLPA 130

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             +   P      +AA +  T  T W+ L   A L       + VL+ G + G+GT A+Q
Sbjct: 131 GQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLT----EGESVLIHGGTSGIGTTAIQ 186

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGI 263
           L +A+  EV  T     K +    L     I+Y        + +  G G  D+ILD  G 
Sbjct: 187 LARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGV-DIILDMIG- 244

Query: 264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSL---------GLVPGLVKNAFDLLKSN 314
                 +Y                    +N  SL           + G V    +L    
Sbjct: 245 -----AAYFE------------------RNIASLAKDGCLSIIAFLGGAVAEKVNLSPI- 280

Query: 315 FESGELCKTNTIRWGFFM---PIPY-------AVKEINKFIERGQIKPVIDSKYNFCELP 364
                + K  T+  G  M               + E+   +E G + PVI   + F ++ 
Sbjct: 281 -----MVKRLTVT-GSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA 334

Query: 365 TAFEKVQQGHLRGKIIL 381
            A   +++G   GK++L
Sbjct: 335 DAHRLLEEGSHVGKVML 351

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  146 bits (370), Expect = 9e-41
 Identities = 55/391 (14%), Positives = 109/391 (27%), Gaps = 94/391 (24%)

Query: 29  AWQISSYGGADELQFND-----------NVKTPILKSKDVLVEMKAVSVNPIDVAML-GG 76
           A  +   G       +             +  P      VL+++   S+NP DVA + G 
Sbjct: 13  ALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQ 72

Query: 77  YGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRV-TDLNIDDVVYGVIQPHK 135
           YG                         G +  G IVA G        +   V        
Sbjct: 73  YG----------------QPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSN 116

Query: 136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL 195
            GS+++  +A++A        + DE+ A ++   LTA +              +K  ++ 
Sbjct: 117 WGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFD-IVKQ----EGEKAFVMT 171

Query: 196 GASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGA 251
             +  +  + + L K      + T   D +  L+  +    V++   P     +  +  A
Sbjct: 172 AGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKA 231

Query: 252 GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG----LV------- 300
               + LDA                 G                +++      +       
Sbjct: 232 EQPRIFLDAVT---------------GPL---------ASAIFNAMPKRARWIIYGRLDP 267

Query: 301 -PGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP---------IPYAVKEINKFIERGQI 350
              +++    L+          +   I  GF++             A+ E  K    G+ 
Sbjct: 268 DATVIREPGQLIF---------QHKHIE-GFWLSEWMRQFKERRGPAILEAQKRFSDGRW 317

Query: 351 KPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
              + +     E              GK+ +
Sbjct: 318 STDVTAVVPLAEAIAWVPAELTKPN-GKVFI 347

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  132 bits (335), Expect = 6e-36
 Identities = 62/241 (25%), Positives = 99/241 (41%), Gaps = 33/241 (13%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGG-YGNVVLNSLRQ 87
             Q S+ GG + L++ D  +      + V+V  KA+ +N ID     G Y          
Sbjct: 4   RIQFSTVGGPEVLEYVD-FEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLY---------- 52

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNI-DDVVYGVIQPHKQGSFSKLILAD 146
                  P    P  LG +  G + A G  VT   + D V YG       G++S++ +  
Sbjct: 53  -------PAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPL---GAYSEVHVLP 102

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAV 206
            A + K   ++S E+AA ++  GLT    L+ T  +       + +L   A+GGVG++A 
Sbjct: 103 EANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVK----PGEIILFHAAAGGVGSLAC 158

Query: 207 QLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP----EAMHSIAGAGPYDVILDAA 261
           Q  KA   +++ T S   K     +L     IDY+        +    G     V+ D  
Sbjct: 159 QWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC-PVVYDGV 217

Query: 262 G 262
           G
Sbjct: 218 G 218

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  132 bits (335), Expect = 1e-35
 Identities = 75/387 (19%), Positives = 134/387 (34%), Gaps = 88/387 (22%)

Query: 29  AWQISSYG--GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVA-MLGGYGNVVLNSL 85
              ++       + +  + +   P+    D+LV  + V VN  D+    G Y        
Sbjct: 26  KLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRY-------- 77

Query: 86  RQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVT-DLNIDDVVYGVIQPHKQGSFSKLIL 144
                   +P ++ P  +G +  G++VA G   +    +   V  +      GSF++  +
Sbjct: 78  --------DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYM----APGSFAEYTV 125

Query: 145 ADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL--GLVYPRDKRVLVLGASGGVG 202
             +++    PS     E   +L +G TA+ +L+    L  G      K+VLV  A+GG G
Sbjct: 126 VPASIATPVPS--VKPEYLTLLVSGTTAYISLKELGGLSEG------KKVLVTAAAGGTG 177

Query: 203 TMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVIL 258
             A+QL K     V+ TCS D K   + SL  +  I+Y        +      G  DV+ 
Sbjct: 178 QFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGV-DVVY 236

Query: 259 DAAGIPLDQINSYLPFLKT-----------GKFSKFVTLRSPFLKNTDSLGLVPGLVKNA 307
           ++ G      +  +  L T           G  +               L     L K+A
Sbjct: 237 ESVG--GAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKL-----LKKSA 289

Query: 308 FDLLKSNFESGELCKTNTIRWGFFMP-----IPYAVKEINKFIERGQIKPVIDSKYNFC- 361
                            +++ GFF+         A+  + +    G +   +D       
Sbjct: 290 -----------------SVQ-GFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPE 331

Query: 362 -------ELPTAFEKVQQGHLRGKIIL 381
                   +  A   +  G   GKI++
Sbjct: 332 GRFTGLESIFRAVNYMYMGKNTGKIVV 358

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  130 bits (329), Expect = 4e-35
 Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 33/241 (13%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGG-YGNVVLNSLRQ 87
             +   +GG + LQ  +          ++ VE KA+ +N ID  +  G Y          
Sbjct: 4   RIEFHKHGGPEVLQAVE-FTPADPAENEIQVENKAIGINFIDTYIRSGLY---------- 52

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD-VVYGVIQPHKQGSFSKLILAD 146
                  P    P  LG +  G +   G  V  +   D VVY        G++S +    
Sbjct: 53  -------PPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSAL---GAYSSVHNII 102

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAV 206
           +      P+ IS E+AA     GLT +  L+ T  +      D++ L   A+GGVG +A 
Sbjct: 103 ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIK----PDEQFLFHAAAGGVGLIAC 158

Query: 207 QLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNE---PEAMHSI-AGAGPYDVILDAA 261
           Q  KA   +++ T     K           VI+Y E    E +  I  G     V+ D+ 
Sbjct: 159 QWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKV-RVVYDSV 217

Query: 262 G 262
           G
Sbjct: 218 G 218

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  129 bits (327), Expect = 5e-35
 Identities = 75/372 (20%), Positives = 126/372 (33%), Gaps = 93/372 (25%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQ 87
           AW +   GG  EL    ++  P  +  +V++ ++AV +N  D  M  G Y          
Sbjct: 3   AWVLKRLGGPLELV---DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAY---------- 49

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADS 147
                    L  P   G +  G +   G R   L              QG  ++ +    
Sbjct: 50  ------LTRLHPPFIPGMEVVGVVE--GRRYAALV------------PQGGLAERVAVPK 89

Query: 148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
             +   P  +S EEAA    + LTA+ AL+  A         ++VLV  A+G +GT AVQ
Sbjct: 90  GALLPLPEGLSPEEAAAFPVSFLTAYLALK-RAQAR----PGEKVLVQAAAGALGTAAVQ 144

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD 266
           + +A  + V+   S   K  L  +L       Y   E        G  D++L+  G    
Sbjct: 145 VARAMGLRVLAAASRPEKLALPLALGAEEAATYA--EVPERAKAWGGLDLVLEVRG---- 198

Query: 267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD--LLKSNFESGE----- 319
                +                   ++   L         A    L+      GE     
Sbjct: 199 ---KEVE------------------ESLGLL---------AHGGRLVYIGAAEGEVAPIP 228

Query: 320 ----LCKTNTIR--WGFFMPI-PYAVKEINKFIER---GQIKPVIDSKYNFCELPTAFEK 369
               + +   +   W   +      V+E   F+      +++PV+   + F E   AF  
Sbjct: 229 PLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRA 288

Query: 370 VQQGHLRGKIIL 381
           +      GK+++
Sbjct: 289 LLDRGHTGKVVV 300

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  130 bits (328), Expect = 1e-34
 Identities = 49/240 (20%), Positives = 82/240 (34%), Gaps = 30/240 (12%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQ 87
           A      GG + L   + V  P     +VL+++ A ++N  D+    G Y          
Sbjct: 25  AVHFDKPGGPENLYVKE-VAKPSPGEGEVLLKVAASALNRADLMQRQGQYD--------- 74

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRV-TDLNIDDVVYGVIQPHKQGSFSKLILAD 146
                  P       LG +  G +   GP       I D    ++     G  ++ +   
Sbjct: 75  -------PPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLP---GGGQAQYVTVP 124

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAV 206
             L+   P  ++  +AA +    LTA+  L +   +         VL+     GVGT A+
Sbjct: 125 EGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQ----AGDYVLIHAGLSGVGTAAI 180

Query: 207 QLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAG 262
           QL +      + T     K  +   L      +Y +    EA          ++ILD  G
Sbjct: 181 QLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 240

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  128 bits (324), Expect = 3e-34
 Identities = 71/375 (18%), Positives = 126/375 (33%), Gaps = 75/375 (20%)

Query: 31  QISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQLE 89
            I   GG D   + + VK        V +   A+ VN +D     G    +         
Sbjct: 6   VIHKKGGPDNFVWEE-VKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPL--------- 55

Query: 90  TCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSAL 149
                 V E P+ +G +    +   GP VTD  + + V   + P   G++S+  L  +  
Sbjct: 56  -----VVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPL--GAYSQERLYPAEK 108

Query: 150 VHKKPSNISDEEA--AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQ 207
           + K P ++  ++   AG++  G+TA   L  T  +         VL+  A+GG+G + V 
Sbjct: 109 LIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVK----PGDYVLIHAAAGGMGHIMVP 164

Query: 208 LLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP----EAMHSIAGAGPYDVILDAAG 262
             +     V+ T S + K +    L  +  I+Y+             G G  DV+ D+ G
Sbjct: 165 WARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGV-DVVYDSIG 223

Query: 263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSL-------------GLVPGLVKNAFD 309
                                   +    K+ D L             G+          
Sbjct: 224 ------------------------KDTLQKSLDCLRPRGMCAAYGHASGVAD-----PIR 254

Query: 310 LLKSNFESGELCKTNTIRWGFFMP---IPYAVKEINKFIERGQIKPVIDSKYNFCELPTA 366
           +++     G L  T    W +      I    K +   ++ G +   +   +   E   A
Sbjct: 255 VVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAA 314

Query: 367 FEKVQQGHLRGKIIL 381
            + +      G I+L
Sbjct: 315 HKYMGGRQTIGSIVL 329

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  128 bits (324), Expect = 5e-34
 Identities = 59/409 (14%), Positives = 113/409 (27%), Gaps = 108/409 (26%)

Query: 29  AWQISSYGGADE---LQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVLNS 84
           A   + +G   +    Q  + +    L   +V+V+     VNP D+  + G Y +     
Sbjct: 6   AVLYTQHGEPKDVLFTQSFE-IDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS----- 59

Query: 85  LRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLIL 144
             +    +     E     G +   +++  G  V+ L   D V         G++    L
Sbjct: 60  --KPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNF--GTWRTHAL 115

Query: 145 ADSALVHK-----------KPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVL 193
            +     K           KP+ ++  + A +    LTA+  L     L       K   
Sbjct: 116 GNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKL----TPGKDWF 171

Query: 194 VL-GASGGVGTMAVQLLKAWDIEVVTTCSGDA-----KDLVTSLNPNLVIDYNEPE---- 243
           +  G +  VG  A Q+ K  +   ++              +  L    VI  ++      
Sbjct: 172 IQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREF 231

Query: 244 -----AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG 298
                     +G     + L+  G               GK                 L 
Sbjct: 232 GPTIKEWIKQSGGEA-KLALNCVG---------------GKS---------STGIARKLN 266

Query: 299 -----LVPGLVKNAFDLLKSNFESGE---------LCKTNTIRWGFFMPIPY-------- 336
                L  G              S +         + K  T   GF++            
Sbjct: 267 NNGLMLTYG------------GMSFQPVTIPTSLYIFKNFTSA-GFWVTELLKNNKELKT 313

Query: 337 -AVKEINKFIERGQIKPVIDSKYNF---CELPTAFEKVQQGHLRGKIIL 381
             + +I  + E G++      +  +     L   ++        GK ++
Sbjct: 314 STLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  126 bits (317), Expect = 4e-33
 Identities = 57/388 (14%), Positives = 115/388 (29%), Gaps = 50/388 (12%)

Query: 27  TAAWQISSY---GGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYG---- 78
            +A Q+ S     G  EL  +  + TP     +VL+ ++A  +NP D+ +L G       
Sbjct: 3   HSALQLRSRIKSSGELELSLDS-IDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTA 61

Query: 79  --------NVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV 130
                    +V   + +    S+   L+  + +G +  G +V  G       +       
Sbjct: 62  KASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA 121

Query: 131 IQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDK 190
           I       +S+     +      P   +  + A      LTA   ++     G       
Sbjct: 122 IGG---AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRLEG-----HS 173

Query: 191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP----EAM 245
            ++   A+  +G M  Q+     I++V       + DL+ +     V +   P    +  
Sbjct: 174 ALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLT 233

Query: 246 HSIAGAGPYDVILDAAGIP--LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGL 303
            ++   G   +  DA G      QI + +         ++    S   K     G +   
Sbjct: 234 EALVSTGA-TIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS 292

Query: 304 VKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER------GQIKPVIDSK 357
                                     F        +  N   +R               +
Sbjct: 293 PTEFNRNFGMA-------WGMGGWLLFPFLQKIGRERANALKQRVVAELKTTFASHYSKE 345

Query: 358 YNFCELPTAFEKVQQGHLR---GKIILN 382
            +  E+    + +   + R    K ++N
Sbjct: 346 ISLAEVLDL-DMIAVYNKRATGEKYLIN 372

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  124 bits (314), Expect = 9e-33
 Identities = 73/386 (18%), Positives = 140/386 (36%), Gaps = 76/386 (19%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQ 87
           A ++   G    LQ    +  P  K   VL++++A  V   DV    G +GN+ +     
Sbjct: 3   AVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVE--- 56

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP-------------- 133
                 +  ++ P+TLG +  GKI   G  V   +  D+V   + P              
Sbjct: 57  ------DLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGE 108

Query: 134 ------------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA 181
                       +  G++++ ++        K   ++  EAA +  +G+T + A++  + 
Sbjct: 109 EHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS- 167

Query: 182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSGDAK-DLVTSLNPNLVIDY 239
              + P    +LV+GA GG+GTMAVQ+ KA     ++     +   +       + VI+ 
Sbjct: 168 ---LDPTK-TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA 223

Query: 240 NEP---EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDS 296
           +       +  I  +   D ++D        ++ Y   L      K+V            
Sbjct: 224 SMQDPLAEIRRITESKGVDAVIDLNNSE-KTLSVYPKALAKQ--GKYVM----------- 269

Query: 297 LGLVPGLVK-NAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVID 355
           +GL    +  +A  +                  G  +        I +  E G++KP+I 
Sbjct: 270 VGLFGADLHYHAPLITL---------SEIQFV-GSLVGNQSDFLGIMRLAEAGKVKPMIT 319

Query: 356 SKYNFCELPTAFEKVQQGHLRGKIIL 381
                 E   A + ++     G+ +L
Sbjct: 320 KTMKLEEANEAIDNLENFKAIGRQVL 345

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  127 bits (321), Expect = 3e-32
 Identities = 88/374 (23%), Positives = 132/374 (35%), Gaps = 75/374 (20%)

Query: 24  STRTAAWQISSYGGADELQFN-DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
                  + +  G  D L    +   T  L   +V + M+A  VN  D  +  G      
Sbjct: 207 DGTGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALG------ 260

Query: 83  NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKL 142
                        +     +LG +  G +V  GP VT L   D V G+I      +F  L
Sbjct: 261 -------------MYPGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIP----KAFGPL 303

Query: 143 ILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
            +AD  +V + P+  S   AA V    LTA+ AL   A L       + +LV  A+GGVG
Sbjct: 304 AVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLR----PGESLLVHSAAGGVG 359

Query: 203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYN----EPEAMHSIAGAGPYDVIL 258
             A+QL +    EV  T S D    V  L+   +        E + + +  G G  DV+L
Sbjct: 360 MAAIQLARHLGAEVYATASEDKWQAV-ELSREHLASSRTCDFEQQFLGATGGRG-VDVVL 417

Query: 259 DA-AGIPLDQINSYLP----FLKTGKFSKFVTLR-SPFLKNT-----DSLGLVPGLVKNA 307
           ++ AG   D     LP    FL+ GK      +  +           D++   P  +   
Sbjct: 418 NSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEM 477

Query: 308 FDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAF 367
              L   FE   L            P+P                      ++  + P A 
Sbjct: 478 LHELVELFEGRVL-----------EPLPVTA-------------------WDVRQAPEAL 507

Query: 368 EKVQQGHLRGKIIL 381
             + Q    GK++L
Sbjct: 508 RHLSQARHVGKLVL 521

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  116 bits (294), Expect = 4e-30
 Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 38/244 (15%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGG-YGNVVLNSLRQ 87
              I   GG D +++ D    P +  +++L++ K   VN I+     G Y          
Sbjct: 11  VILIDEIGGYDVIKYED-YPVPSISEEELLIKNKYTGVNYIESYFRKGIYP--------- 60

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDD-VVYGVIQPHKQGSFSKLILAD 146
                     E P  LGR+  G +VAKG  VT+  + D V Y          +SK+    
Sbjct: 61  ---------CEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTF--AQYSKISSQG 109

Query: 147 SALVHKKPSNISDEE---AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGT 203
             +  K P   SDEE    A  L   LTA S       +     +   VL+  A+GGVG 
Sbjct: 110 PVM--KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVK----KGDYVLLFAAAGGVGL 163

Query: 204 MAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEP----EAMHSIAGAGPYDVIL 258
           +  QLLK      +   S D K  +        +I+ ++     + +    G G  D   
Sbjct: 164 ILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGV-DASF 222

Query: 259 DAAG 262
           D+ G
Sbjct: 223 DSVG 226

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 90.0 bits (224), Expect = 3e-20
 Identities = 63/385 (16%), Positives = 126/385 (32%), Gaps = 80/385 (20%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQ 87
           A  +  +     ++   +V  P  + ++VL+ +    V   D+    G            
Sbjct: 6   AALLKKFSEPLSIE---DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFR---- 58

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPH------------- 134
                       P+ LG +  G IV  G  +  +   D V  V+                
Sbjct: 59  -----------LPIILGHENAGTIVEVGE-LAKVKKGDNV--VVYATWGDLTCRYCREGK 104

Query: 135 -------------KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA 181
                          G FS+ +L  S+    K +++S  EAA +   G T+  A++    
Sbjct: 105 FNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALP 164

Query: 182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKA--WDIEVVTTCSGDAK-DLVTSLNPNLVID 238
               +     V+++   GG+    +Q+LKA   +I +V         D    L  + V +
Sbjct: 165 FISKFAEP--VVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSE 222

Query: 239 YNEP-EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSL 297
             +    ++ +       + +D  G   +   +    L        +            +
Sbjct: 223 MKDAESLINKLTDGLGASIAIDLVGTE-ETTYNLGKLLAQE--GAIIL-----------V 268

Query: 298 GLVPGLVK-NAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDS 356
           G+    V   AFD                +  G        ++++ +  E G+IKP I  
Sbjct: 269 GMEGKRVSLEAFDTAV---------WNKKLL-GSNYGSLNDLEDVVRLSESGKIKPYI-I 317

Query: 357 KYNFCELPTAFEKVQQGHLRGKIIL 381
           K    ++  AF  + +G + G+ ++
Sbjct: 318 KVPLDDINKAFTNLDEGRVDGRQVI 342

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 90.7 bits (225), Expect = 1e-19
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 68/348 (19%)

Query: 52   LKSKDVLVEMKAVSVNPIDVAM-LGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGK 110
               +D L  +   S+N  DV +  G                        P ++   +  +
Sbjct: 1557 ASCQDRLCSVYYTSLNFRDVMLATGKLS---------------------PDSIPGKWLTR 1595

Query: 111  IVAKG-PRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTG 169
                G            V G++        +  +L       + PS  + EEAA V    
Sbjct: 1596 DCMLGMEFSGRDASGRRVMGMVP---AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVY 1652

Query: 170  LTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLV 228
             TA+ +L +   +       + VL+   SGGVG  A+ +  +    V TT     K   +
Sbjct: 1653 TTAYYSLVVRGRMQ----PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYL 1708

Query: 229  TSLNPNLVIDY-------NEPEAMHSIAGAGPYDVILDA-AGIPLDQINSYLP----FLK 276
             +  P L           +  + +         D++L++ A   L      L     FL+
Sbjct: 1709 QARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLE 1768

Query: 277  TGKFSKFVTLRSPFLKNTDSLG---LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP 333
             GKF     L +       +LG    +  +  +   L     E G               
Sbjct: 1769 IGKF----DLSNN-----HALGMAVFLKNVTFHGILLDSLFEEGGAT------------- 1806

Query: 334  IPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
                 + +   I+ G ++P+  + +   ++  AF  + QG   GK+++
Sbjct: 1807 WQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVI 1854

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 83.0 bits (206), Expect = 8e-18
 Identities = 67/374 (17%), Positives = 115/374 (30%), Gaps = 90/374 (24%)

Query: 46  NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR 105
           NV  P     D+LV+++A  +   D  +L G                 E     P+TLG 
Sbjct: 39  NVGIPEPGPDDLLVKVEACGICGTDRHLLHG-----------------EFPSTPPVTLGH 81

Query: 106 DFCGKIVAKGPRVTDLNIDDVVYGVIQP--------------------------HKQGSF 139
           +FCG +V  G  V D+     +     P                          H+ G F
Sbjct: 82  EFCGIVVEAGSAVRDIAPGARI--TGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGF 139

Query: 140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASG 199
           ++ +L       + P  +     A                   G        V +LG  G
Sbjct: 140 AEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAG------STVAILGG-G 192

Query: 200 GVGTMAVQLLK---AWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE---PEAMHSIAGAGP 253
            +G + VQL +   A  + +++T     + L   +     +D +     EA+    G  P
Sbjct: 193 VIGLLTVQLARLAGATTV-ILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVP 251

Query: 254 Y--DVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL 311
              DV+++ AG+  + +       K G     V            LG++P   K   +  
Sbjct: 252 GGVDVVIECAGVA-ETVKQSTRLAKAG--GTVVI-----------LGVLPQGEKVEIEPF 297

Query: 312 KSNFESGELCKTNTIR--WGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAF 367
              F   EL     +   +        A       +  G I    +I  + +  E P   
Sbjct: 298 DILFR--EL----RVLGSFINPFVHRRAA----DLVATGAIEIDRMISRRISLDEAPDVI 347

Query: 368 EKVQQGHLRGKIIL 381
                     K+++
Sbjct: 348 SNPAAAG-EVKVLV 360

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 63/329 (19%), Positives = 117/329 (35%), Gaps = 73/329 (22%)

Query: 94  EPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV------------------------YG 129
                +P+TLG +F G I A G  V DL+  D V                        Y 
Sbjct: 48  NGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYD 107

Query: 130 VIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLVYP 187
            I   + G F++ I+     V   P+++  E+ A +  +  GL A+   Q          
Sbjct: 108 FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE------- 160

Query: 188 RDKRVLVLGASGGVGTMAVQLLKAWDIE--VVTTCSGDAKDLVTSLNPNLVIDYNE---P 242
            +K V+++GA G +G +A+Q   A   +       S +   L  S       + +E   P
Sbjct: 161 -NKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAP 218

Query: 243 EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG 302
           +    +       +IL+ AG+P   +   +        ++   +               G
Sbjct: 219 QMQSVLRELRFNQLILETAGVP-QTVELAVEIAGPH--AQLALV---------------G 260

Query: 303 LVKNAFDLLKSNFE---SGELCKTNTIRWGFFM--PIPYAVKEINK---FIERGQI--KP 352
            +     L  + F      EL    T+  G +M    P+  +E       +   ++  +P
Sbjct: 261 TLHQDLHLTSATFGKILRKEL----TVI-GSWMNYSSPWPGQEWETASRLLTERKLSLEP 315

Query: 353 VIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           +I  + +F     A   + +  + GK++L
Sbjct: 316 LIAHRGSFESFAQAVRDIARNAMPGKVLL 344

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 71/320 (22%), Positives = 121/320 (37%), Gaps = 77/320 (24%)

Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVV----------------------------YGV 130
            PL  G +  G +   GP VT L + D V                             G 
Sbjct: 55  LPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY 114

Query: 131 IQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL-GLVYPRD 189
                 G +++   A +  V K P N+S EEAA +   G+T + AL++T A  G      
Sbjct: 115 ---SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPG------ 165

Query: 190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSI 248
           + V + G  GG+G +AVQ  KA  + VV    GD K +L   L  +LV++  + +A   +
Sbjct: 166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFM 224

Query: 249 -AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVK-N 306
               G     +  A        S    ++ G     V            +GL P  +   
Sbjct: 225 KEKVGGVHAAVVTAVSKPA-FQSAYNSIRRG--GACVL-----------VGLPPEEMPIP 270

Query: 307 AFDLLKSNFE-----SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFC 361
            FD + +  +      G      T +          ++E  +F   G++K +I       
Sbjct: 271 IFDTVLNGIKIIGSIVG------TRK---------DLQEALQFAAEGKVKTII-EVQPLE 314

Query: 362 ELPTAFEKVQQGHLRGKIIL 381
           ++   F+++ +G + G+++L
Sbjct: 315 KINEVFDRMLKGQINGRVVL 334

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 75/392 (19%), Positives = 134/392 (34%), Gaps = 95/392 (24%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLRQ 87
                   G  +L++ D +  P  K+ ++L+ +K   V   D+ A  G +   V      
Sbjct: 8   GVIFYESHG--KLEYKD-IPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPV------ 58

Query: 88  LETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV-------------------- 127
                     + PL  G +  G +V  G  V    I D                      
Sbjct: 59  ----------KLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNE 108

Query: 128 ----------YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQ 177
                     Y        GSF +   AD+      P      + A +L  G+T + AL+
Sbjct: 109 SNCPHADLSGYTH-----DGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK 163

Query: 178 ITAAL-GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNL 235
               + G        V + GA+GG+G++AVQ  KA    V+    G+ K +L  S+   +
Sbjct: 164 SANLMAG------HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEV 217

Query: 236 VIDYNEPEAMHSI---AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLK 292
            ID+ + + +      A  G    +++ +      I +   +++       V        
Sbjct: 218 FIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAA-IEASTRYVRAN--GTTVL------- 267

Query: 293 NTDSLGLVPG--LVKNAFDL-LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ 349
               +G+  G     + F+  +KS    G                    +E   F  RG 
Sbjct: 268 ----VGMPAGAKCCSDVFNQVVKSISIVGSY--VGNRA---------DTREALDFFARGL 312

Query: 350 IKPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           +K  I        LP  +EK+++G + G+ ++
Sbjct: 313 VKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVV 343

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 70/394 (17%), Positives = 125/394 (31%), Gaps = 106/394 (26%)

Query: 35  YGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPI---DVAML--GGYGNVVLNSLRQLE 89
               + L   D    P     ++LV ++A S   I   D+ +     +            
Sbjct: 7   LAPEEGLTLVD-RPVPEPGPGEILVRVEAAS---ICGTDLHIWKWDAWA----------- 51

Query: 90  TCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHK-------------- 135
                  +  PL  G +F G + A GP V    + D V   ++ H               
Sbjct: 52  ----RGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHV--SLESHIVCHACPACRTGNYH 105

Query: 136 ------------QGSFSKLILADSALVHKKPSNISDEEAA-----GVLYTGLTAWSALQI 178
                        G F++ ++  +      P ++  E AA     G         +    
Sbjct: 106 VCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGN-----AVHTVYAG 160

Query: 179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLK---AWDIEVVTTCSGD----AKDLVTS- 230
           +   G      K VL+ GA G +G MA  +++   A  I +V+  +      A+      
Sbjct: 161 SGVSG------KSVLITGA-GPIGLMAAMVVRASGAGPI-LVSDPNPYRLAFARPYADRL 212

Query: 231 LNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF 290
           +NP    + +  E +  + G+G  +V+L+ +G     I+  L  L  G   +   L  P 
Sbjct: 213 VNPL---EEDLLEVVRRVTGSGV-EVLLEFSGNE-AAIHQGLMALIPG--GEARILGIP- 264

Query: 291 LKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI 350
             +     L   LV               L +T    W                +  G++
Sbjct: 265 -SDPIRFDLAGELVMRGITAFGIA--GRRLWQT----W------MQGT----ALVYSGRV 307

Query: 351 --KPVIDSKYNFCELPTAFEKVQQGHLRGKIILN 382
              P++  +        AF  +  G    K+IL+
Sbjct: 308 DLSPLLTHRLPLSRYREAFGLLASGQ-AVKVILD 340

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 74.9 bits (185), Expect = 4e-15
 Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 43/218 (19%)

Query: 98  EFPLTLGRDFCGKIVAKGPRVTDLNIDDVV-----------------------------Y 128
            +P+  G +  G++V  G  V+   + D+V                             Y
Sbjct: 62  NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSY 121

Query: 129 GVIQPHK---QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185
             +  +    QG F+K  +     V K P  ++ E+AA +L  G+T +S L      GL 
Sbjct: 122 NDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLS---HFGLK 178

Query: 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVV--TTCSGDAKDLVTSLNPNLVIDYNEPE 243
            P   R  +LG  GGVG M V++ KA    V   ++ +   ++ +  L  +  +  ++  
Sbjct: 179 QP-GLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQA 236

Query: 244 AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKT-GKF 280
            M  +A +   D ++D   +    +  YL  LK  GK 
Sbjct: 237 KMSELADS--LDYVIDTVPVHHA-LEPYLSLLKLDGKL 271

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 74.9 bits (185), Expect = 4e-15
 Identities = 63/313 (20%), Positives = 114/313 (36%), Gaps = 63/313 (20%)

Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV---------------------IQP---- 133
            P   G +  G + A G  V+ +   D V GV                      +     
Sbjct: 57  LPFIPGHEGVGYVSAVGSGVSRVKEGDRV-GVPWLYSACGYCEHCLQGWETLCEKQQNTG 115

Query: 134 -HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL-GLVYPRDKR 191
               G + + ++AD   V   P  +   E A +L  G+T +  L++T    G      + 
Sbjct: 116 YSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPG------QW 169

Query: 192 VLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSI-A 249
           V++ G  GG+G +AVQ  +A  + V      DAK +L   L   + ++  + +    +  
Sbjct: 170 VVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQK 228

Query: 250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVK-NAF 308
             G    +L  A  P    +  +  ++ G                   GL PG      F
Sbjct: 229 EIGGAHGVLVTAVSPKA-FSQAIGMVRRG--GTIAL-----------NGLPPGDFGTPIF 274

Query: 309 DLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFE 368
           D+         + K  TIR G  +     ++E   F   G +K  + S     ++   F 
Sbjct: 275 DV---------VLKGITIR-GSIVGTRSDLQESLDFAAHGDVKATV-STAKLDDVNDVFG 323

Query: 369 KVQQGHLRGKIIL 381
           ++++G + G+++L
Sbjct: 324 RLREGKVEGRVVL 336

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 74.6 bits (184), Expect = 6e-15
 Identities = 70/391 (17%), Positives = 134/391 (34%), Gaps = 89/391 (22%)

Query: 29  AWQISSYGGADELQFNDNVKTP-ILKSKDVLVEMKAVSVNPIDV-AMLGGYGNVVLNSLR 86
           A ++  Y     ++   +V  P +    DV+V +    V   D+  + G +  ++   L 
Sbjct: 18  AARLHEYNKPLRIE---DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL- 73

Query: 87  QLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPH------------ 134
                        P TLG +  G I      V  L   D V  ++ P             
Sbjct: 74  -------------PYTLGHENVGYIEEVAEGVEGLEKGDPV--ILHPAVTDGTCLACRAG 118

Query: 135 --------------KQGSFSKLILADSALVHKKPSNISDE---EAAGVLYTGLTAWSALQ 177
                           G F++ +      V K P +IS E   E A +   G+TA+ A++
Sbjct: 119 EDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVK 178

Query: 178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDAK-DLVTSLNPNL 235
             A    +YP    V ++G  GG+G +AVQLLK      V+     + K  L   L  + 
Sbjct: 179 KAART--LYPGA-YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH 234

Query: 236 VIDYNE--PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKN 293
           V+D      + +  +      +V +D  G     ++     L      + +         
Sbjct: 235 VVDARRDPVKQVMELTRGRGVNVAMDFVGSQ-ATVDYTPYLLGRM--GRLII-------- 283

Query: 294 TDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIR---WGFFMPIPYAVKEINKFIERGQI 350
              +G    L      ++             +      G ++ +   V        +G++
Sbjct: 284 ---VGYGGELRFPTIRVIS---------SEVSFEGSLVGNYVELHELV----TLALQGKV 327

Query: 351 KPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
           +  +   +   E+    E++++G + G+ +L
Sbjct: 328 RVEV-DIHKLDEINDVLERLEKGEVLGRAVL 357

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 74.3 bits (183), Expect = 6e-15
 Identities = 56/392 (14%), Positives = 103/392 (26%), Gaps = 95/392 (24%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPI---DV-AMLGGYGNVVLNSLRQLETCS 92
           G D     +    P  +S + LV    V    +   D   + GG+G              
Sbjct: 9   GEDRPVVIE-KPRPEPESGEALVRTLRVG---VCGTDHEVIAGGHGG------------- 51

Query: 93  VEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV------------------------- 127
             P  E  L LG +  G +V      T+L   D+V                         
Sbjct: 52  -FPEGEDHLVLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAP 108

Query: 128 ----YGVIQPHKQGSFSKLILADSALVHKKPSNISDE----EAAGVLYTGLTAWSALQIT 179
               +        G  S+   +    + + P + ++     E   +      A      +
Sbjct: 109 DGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQAELGFLIEPISI---TEKALEHAYAS 165

Query: 180 AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI---EVVTTCSGD----AKDLVTSLN 232
            +     P      VLG  G +G + + +LK  D     +      D      D++  L+
Sbjct: 166 RSAFDWDP--SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD 222

Query: 233 PNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLK 292
              V     P            D I +A G P       +  L          L      
Sbjct: 223 ATYVDSRQTPVEDVPDVYEQM-DFIYEATGFP-KHAIQSVQALAPN--GVGALL------ 272

Query: 293 NTDSLGLVPGLVKNAFDLLKSNFESGELCKTN-TIRWGFFMPIPYAVKEINKFIERGQI- 350
                    G+  +    + +     E+   N  +       + +       F +  +  
Sbjct: 273 ---------GVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWF 323

Query: 351 -KPVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
            + ++   +   E   AF+         K  +
Sbjct: 324 LEDLVTGVHPLSEFEAAFDDDDTT---IKTAI 352

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 74.2 bits (183), Expect = 6e-15
 Identities = 62/390 (15%), Positives = 126/390 (32%), Gaps = 86/390 (22%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A Q +  G    +    ++ TP     ++L+++ A  +   D+ ++              
Sbjct: 3   AVQYTEIGSEPVVV---DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQY------- 52

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV--------------------- 127
                      PLTLG +  G +   G  VT   + D V                     
Sbjct: 53  -------AYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENY 105

Query: 128 --------YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQIT 179
                            GS ++ ++ DSA       ++    AA +   GLT + A+   
Sbjct: 106 CTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRV 165

Query: 180 AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDAK-DLVTSLNPNLVI 237
               L+ P     +V+G  GG+G + +Q+L+A     V+     D +  L   +  +  +
Sbjct: 166 LP--LLGP-GSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAV 221

Query: 238 DYNE--PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTD 295
                  +A+  + G      + D  G     I++    +                    
Sbjct: 222 KSGAGAADAIRELTGGQGATAVFDFVGAQ-STIDTAQQVVAVD--GHISV---------- 268

Query: 296 SLGLVPG-LVKNAFDLLKSNFESGELCKTNTIR---WGFFMPIPYAVKEINKFIERGQIK 351
            +G+  G   K  F ++             ++    WG    +   V         G++ 
Sbjct: 269 -VGIHAGAHAKVGFFMIP---------FGASVVTPYWGTRSELMEVV----ALARAGRLD 314

Query: 352 PVIDSKYNFCELPTAFEKVQQGHLRGKIIL 381
                 +   E P A+ ++++G +RG+ ++
Sbjct: 315 IHT-ETFTLDEGPAAYRRLREGSIRGRGVV 343

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 73.8 bits (182), Expect = 7e-15
 Identities = 54/268 (20%), Positives = 94/268 (35%), Gaps = 68/268 (25%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML--GGYGNVVLNSLRQLETCSVE 94
             ++L+  +    P  K  +VL++M  V +   DV     G   +               
Sbjct: 12  KQNDLRL-EQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIAD--------------- 55

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV--------------------------- 127
            +++ P+ +G +  G +V  G  V  L   D V                           
Sbjct: 56  FIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF 115

Query: 128 YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAALGLV 185
                P   G+ ++  +  +   HK P N+S EE A +  L  G+ A     +       
Sbjct: 116 CAT--PPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLG---- 169

Query: 186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---------DLVTSLNPNLV 236
                 VLV+GA G +G ++V   KA+   VV T     +         D+   ++P   
Sbjct: 170 ----TTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKE 224

Query: 237 IDYNEPEAMHSIAGAGPYDVILDAAGIP 264
            + +  E + S  G  P +V +D +G  
Sbjct: 225 EESSIIERIRSAIGDLP-NVTIDCSGNE 251

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 73.8 bits (182), Expect = 9e-15
 Identities = 72/382 (18%), Positives = 131/382 (34%), Gaps = 101/382 (26%)

Query: 46  NVKTPILKSKDVLVEMKAVSVNPI---DVAML--GGYGNVVLNSLRQLETCSVEPVLEFP 100
            V  P     +VL+++ A S   I   D+ +     +                   ++ P
Sbjct: 21  EVDVPKPGPGEVLIKVLATS---ICGTDLHIYEWNEWAQ---------------SRIKPP 62

Query: 101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPH-------------------------- 134
             +G +  G++V  GP V  + + D V   ++ H                          
Sbjct: 63  QIMGHEVAGEVVEIGPGVEGIEVGDYV--SVETHIVCGKCYACRRGQYHVCQNTKIFGVD 120

Query: 135 KQGSFSKLILADSALVHKKPSNISDEEAA-----GVLYTGLTAWSALQITAALGLVYPRD 189
             G F++  +  +  + K P +I  E A      G       A   +      G      
Sbjct: 121 TDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGN------AVDTVLAGPISG------ 168

Query: 190 KRVLVLGASGGVGTMAVQLLK---AWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE---PE 243
           K VL+ GA G +G + + + K   A+ + +V+  S   ++L   +  + VI+  E    +
Sbjct: 169 KSVLITGA-GPLGLLGIAVAKASGAYPV-IVSEPSDFRRELAKKVGADYVINPFEEDVVK 226

Query: 244 AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGL 303
            +  I      DV L+ +G P   +   L  +      +              LGL PG 
Sbjct: 227 EVMDITDGNGVDVFLEFSGAP-KALEQGLQAVTPA--GRVSL-----------LGLYPGK 272

Query: 304 VKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKY-NF 360
           V    D          L    TI       +      +++ ++ G++   P+I  KY  F
Sbjct: 273 V--TIDFNNLII-FKAL----TIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGF 325

Query: 361 CELPTAFEKVQQGHLRGKIILN 382
            +   AFE ++ G   GK++  
Sbjct: 326 DKYEEAFELMRAGK-TGKVVFM 346

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 43/217 (19%)

Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVV-----------------------------YG 129
           +PL  G +  G++   G +V  +N+ D V                             Y 
Sbjct: 70  YPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYA 129

Query: 130 VIQPHK---QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186
            I        G +S  ++A+   + + P N+  +  A +L  G+T +S L+     GL  
Sbjct: 130 SIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLK---YFGLDE 186

Query: 187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVV--TTCSGDAKDLVTSLNPNLVIDYNEPEA 244
           P  K + ++G  GG+G +AV+  KA+  +V   +T     ++ + +   +  +   + E 
Sbjct: 187 P-GKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244

Query: 245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKT-GKF 280
           M + AG    D I+D        +      LK+ GK 
Sbjct: 245 MQAAAGT--LDGIIDTVSAVHP-LLPLFGLLKSHGKL 278

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 68.4 bits (168), Expect = 8e-14
 Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 26/195 (13%)

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAV 206
           S LV   P  ++D EAA      LTAW +L     L       +RVL+  A+GGVG  AV
Sbjct: 1   SDLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLS----PGERVLIHSATGGVGMAAV 56

Query: 207 QLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYN----EPEAMHSIAGAGPYDVILDA- 260
            + K     + TT   DAK ++++ L    V D        E +    G G  DV+L++ 
Sbjct: 57  SIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYG-VDVVLNSL 115

Query: 261 AGIPLDQINSYLP----FLKTGKFSKFVTLR---SPFLKNT-----DSLGLV---PGLVK 305
           AG  + +    L     F++ GK   +       +   K+      D    +   P   +
Sbjct: 116 AGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYR 175

Query: 306 NAFDLLKSNFESGEL 320
                +  +   G+L
Sbjct: 176 QLLQHILQHVADGKL 190

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 51/271 (18%), Positives = 88/271 (32%), Gaps = 75/271 (27%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML--GGYGNVVLNSLRQLETCSVE 94
           G  +L+  +    P     +VL+ M +V +   DV     G  GN               
Sbjct: 15  GPGDLRLEN-YPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGN--------------- 58

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV--------------------------- 127
            +++ P+ LG +  G +   G  V  L   D V                           
Sbjct: 59  FIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF 118

Query: 128 YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAA-----GVLYTGLTAWSALQITAAL 182
                P   G+  +    ++A  +K P N++ EE A      V          +      
Sbjct: 119 CAT--PPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV---------GIHACRRG 167

Query: 183 GLVYPRDKRVLVLGASGGVGTMAVQLLK---AWDIEVVTTCSGDAKDLVTSLNPNLVIDY 239
           G+      +VLV GA G +G + + + K   A  + VVT  S         +  +LV+  
Sbjct: 168 GV--TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQV-VVTDLSATRLSKAKEIGADLVLQI 223

Query: 240 NEP------EAMHSIAGAGPYDVILDAAGIP 264
           ++         +    G  P +V ++  G  
Sbjct: 224 SKESPQEIARKVEGQLGCKP-EVTIECTGAE 253

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 48/272 (17%), Positives = 78/272 (28%), Gaps = 75/272 (27%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPI---DVAML--GGYGNVVLNSLRQLETC 91
                      K   LK  +V V +++     I   DV     G  G             
Sbjct: 23  SEASPSLESVQKGEELKEGEVTVAVRSTG---ICGSDVHFWKHGCIG------------- 66

Query: 92  SVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV------------------------ 127
               ++E    LG +  G+++A  P V  + + D V                        
Sbjct: 67  --PMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCER 124

Query: 128 ---YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGV--LYTGLTAWSALQITAAL 182
                   P   G   + +   +   HK   N+S E  A +  L   L      +    L
Sbjct: 125 VDFLST--PPVPGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLSVAL--AGLQRAGVRL 179

Query: 183 GLVYPRDKRVLVLGASGGVGTMAVQLLK---AWDIEVVTTCSGDAKDLVTSLNPNLVIDY 239
           G        VL+ GA G +G + +   K   A  + V+T            + P +V   
Sbjct: 180 G------DPVLICGA-GPIGLITMLCAKAAGACPL-VITDIDEGRLKFAKEICPEVVTHK 231

Query: 240 NEP-------EAMHSIAGAGPYDVILDAAGIP 264
            E        + +    G     V L+  G+ 
Sbjct: 232 VERLSAEESAKKIVESFGGIEPAVALECTGVE 263

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 68.4 bits (168), Expect = 6e-13
 Identities = 45/218 (20%), Positives = 80/218 (36%), Gaps = 45/218 (20%)

Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVV-----------------------------YG 129
           +P   G +  G++VA G +V      D+V                             Y 
Sbjct: 76  YPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYN 135

Query: 130 VIQPHK----QGSFSKLILADSALVHKKPSNISDEEAAG-VLYTGLTAWSALQITAALGL 184
              P +     G +S+ I+     V +         A   +L  G+T +S L+     G 
Sbjct: 136 SPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLR-HWQAG- 193

Query: 185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV-VTTCSGDAKDLVTSLNPNLVIDYNEPE 243
                K+V V+G  GG+G M ++L  A    V   T S   ++   +L  + V++    +
Sbjct: 194 ---PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNAD 249

Query: 244 AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKT-GKF 280
            M +   +  +D IL+    P + ++ +   LK  G  
Sbjct: 250 EMAAHLKS--FDFILNTVAAPHN-LDDFTTLLKRDGTM 284

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 35/258 (13%), Positives = 71/258 (27%), Gaps = 49/258 (18%)

Query: 56  DVLVEMKAVSVNPIDVAML-GGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAK 114
            + +      +   D  ++ G      L            P  +  L LG +  G +   
Sbjct: 28  KIKIRTIYNGICGADREIVNGKLTLSTL------------PKGKDFLVLGHEAIGVVEES 75

Query: 115 GP------RVT-DLNI-----------------DDVVYGVIQPHKQGSFSKLILADSALV 150
                    V                                    G   +    D   +
Sbjct: 76  YHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYL 135

Query: 151 HKKPSNISDE----EAAGV----LYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVG 202
            K P +I D     +        +   L     + +            +VLV+G  G +G
Sbjct: 136 VKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCR-KVLVVGT-GPIG 193

Query: 203 TMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSI--AGAGPYDVILDA 260
            +   L + + +EV      +  ++  ++      +Y      +       G +DVI+DA
Sbjct: 194 VLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDA 253

Query: 261 AGIPLDQINSYLPFLKTG 278
            G  ++ + + +P L   
Sbjct: 254 TGADVNILGNVIPLLGRN 271

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 57/383 (14%), Positives = 112/383 (29%), Gaps = 92/383 (24%)

Query: 51  ILKSKDVLVEMKAVSVNPI---DVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF 107
           I K  ++++++KA     I   DV M        +             +  FP+TLG +F
Sbjct: 52  IEKPTEIIIKVKACG---ICGSDVHMAQTDEEGYIL---------YPGLTGFPVTLGHEF 99

Query: 108 CGKIVAKGPRVTDLNIDDVV------------------------------YGVIQPHKQG 137
            G +V  GP   +   +                                    +  +  G
Sbjct: 100 SGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDG 159

Query: 138 SFSKLILADSALVHKKP-------SNISDEEAAGV--LYTGLTAWSALQITAALGLVYPR 188
           +F++ +  D+               +      + V        A          G     
Sbjct: 160 AFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPG----- 214

Query: 189 DKRVLVLGASGGVGTMAVQLLKAW---DIEVVTTCSGDAKDLVTSLNPNLVIDYNE---P 242
              V++LG  G +G  AV +LK      + +++  S   ++L   L  + VID  +    
Sbjct: 215 -DNVVILGG-GPIGLAAVAILKHAGASKV-ILSEPSEVRRNLAKELGADHVIDPTKENFV 271

Query: 243 EAMHSI-AGAGPYDVILDAAGIP--LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGL 299
           EA+     G G   + L+A G+P  +      + +   G  +    +             
Sbjct: 272 EAVLDYTNGLGA-KLFLEATGVPQLVWPQIEEVIWRARGINATVAIV------------- 317

Query: 300 VPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG-QIKPVIDSKY 358
                     L    F+         I              +   +  G  +  +I    
Sbjct: 318 --ARADAKIPLTGEVFQVRRA----QIVGSQGHSGHGTFPRVISLMASGMDMTKIISKTV 371

Query: 359 NFCELPTAFEKVQQGHLRGKIIL 381
           +  E+P   +++Q      K+ +
Sbjct: 372 SMEEIPEYIKRLQTDKSLVKVTM 394

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 64.1 bits (157), Expect = 1e-11
 Identities = 47/227 (20%), Positives = 69/227 (30%), Gaps = 68/227 (29%)

Query: 99  FPLTLGRDFCGKIVAKGPRVTDLNIDDVV-----------------------------YG 129
           +P+  G +  G I   G  V    I DVV                             Y 
Sbjct: 58  YPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYD 117

Query: 130 VIQPHK-----QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL 184
            +          G +S  I+ D   V     N   E+ A +L  G+T +S L+  + +  
Sbjct: 118 CLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLK-FSKVT- 175

Query: 185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVV--TTCSG---DAKDL-----VTSLNPN 234
              +  +V V G  GG+G+MAV+   A   EV           DA  +      T     
Sbjct: 176 ---KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTD---- 227

Query: 235 LVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKT-GKF 280
                  P+           D I+       D +  YL  L   G  
Sbjct: 228 -------PKQC-----KEELDFIISTIPTHYD-LKDYLKLLTYNGDL 261

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 52/195 (26%), Positives = 77/195 (39%), Gaps = 24/195 (12%)

Query: 52  LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKI 111
           L    VL+++    +N  D       GN+V    R+           +PL LG D  G +
Sbjct: 29  LPKDGVLIKVAYSGINYKDGLAGKAGGNIV----RE-----------YPLILGIDAAGTV 73

Query: 112 VAKGPRVTDLNIDDVV----YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLY 167
           V+           D V    Y +      G  S+        +   P N+S +EA     
Sbjct: 74  VS--SNDPRFAEGDEVIATSYELGVSR-DGGLSEYASVPGDWLVPLPQNLSLKEAMVYGT 130

Query: 168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT-TCSGDAKD 226
            G TA  ++      GL  P    VLV GA+GGVG +AV +L     +VV  T + +A D
Sbjct: 131 AGFTAALSVHRLEQNGLS-PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD 189

Query: 227 LVTSLNPNLVIDYNE 241
            +  L  + VI   +
Sbjct: 190 YLKQLGASEVISRED 204

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 57.9 bits (141), Expect = 1e-09
 Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 32/159 (20%)

Query: 136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL 195
           QG ++  +      V   P NI    AA +L  GLT +S L      G      K+V ++
Sbjct: 132 QGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLV-RNGCG----PGKKVGIV 186

Query: 196 GASGGVGTMAVQLLKAWDIEVV--TTCSG---DAKDL------VTSLNPNLVIDYNEPEA 244
           G  GG+G+M   + KA   E    +  S    DA  +       T           E + 
Sbjct: 187 GL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL---------EEGDW 236

Query: 245 MHSIAGAGPYDVILD--AAGIPLDQINSYLPFLKT-GKF 280
                    +D+I+   ++   +D  N     +K  G+ 
Sbjct: 237 GEKYFDT--FDLIVVCASSLTDID-FNIMPKAMKVGGRI 272

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 25/218 (11%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +    G         ++   L + DV V++   S+N  D   + G G ++    R  
Sbjct: 3   ALILEQQDGKTLASVQH-LEESQLPAGDVTVDVHWSSLNYKDALAITGKGKII----RH- 56

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVV----YGVIQPHKQGSFSKLIL 144
                     FP+  G DF G + A        +    V    +GV + H  G  ++   
Sbjct: 57  ----------FPMIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWGVGENH-WGGLAERAR 103

Query: 145 ADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTM 204
                +   P+ +S   A  +   G TA   +      G + P+D  V+V GASGGVG+ 
Sbjct: 104 VKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAG-IRPQDGEVVVTGASGGVGST 162

Query: 205 AVQLLKAWDIEVV-TTCSGDAKDLVTSLNPNLVIDYNE 241
           AV LL     +V   +        + SL  N ++  +E
Sbjct: 163 AVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDE 200

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 1e-08
 Identities = 56/371 (15%), Positives = 93/371 (25%), Gaps = 107/371 (28%)

Query: 21  LKYSTRTAAWQISSYGGADELQFNDNV---------KTPILKSKDVLVEMKA---VSVNP 68
           +K   R  +     Y    +  +NDN            P LK +  L+E++    V ++ 
Sbjct: 98  IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID- 156

Query: 69  IDVAMLGGYGNVVLNSLRQLETCSVEPVLE-FP-----LTLGRDFCGKIVAKGPRVTDLN 122
               +  G G   +     L+ C    V          L L            P      
Sbjct: 157 ---GV-LGSGKTWV----ALDVCLSYKVQCKMDFKIFWLNLKNCNS-------PETVLEM 201

Query: 123 IDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISD--EEAAGVLYTGLTAWSALQITA 180
           +  ++Y +       S                SNI          L   L +        
Sbjct: 202 LQKLLYQIDPNWTSRSDH-------------SSNIKLRIHSIQAELRRLLKSKP------ 242

Query: 181 ALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYN 240
                Y     +LVL     V           + +     +   K L+T+     V D  
Sbjct: 243 -----YENC--LLVLL---NV----------QNAKAWNAFNLSCKILLTTRFKQ-VTD-- 279

Query: 241 EPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLV 300
                  ++ A    + LD   + L                K++  R         L   
Sbjct: 280 ------FLSAATTTHISLDHHSMTLTPDEV------KSLLLKYLDCR------PQDL--- 318

Query: 301 PGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG--QIKPVIDSKY 358
           P  V        S     E  +     W  +        ++   IE     ++P    K 
Sbjct: 319 PREVLTTNPRRLSII--AESIRDGLATWDNWK--HVNCDKLTTIIESSLNVLEPAEYRKM 374

Query: 359 NFCELPTAFEK 369
            F  L + F  
Sbjct: 375 -FDRL-SVFPP 383

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 24/195 (12%)

Query: 52  LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKI 111
           L   DVLV +   SVN  D       G +V    +            +P   G D  G +
Sbjct: 28  LPEGDVLVRVHYSSVNYKDGLASIPDGKIV----KT-----------YPFVPGIDLAGVV 72

Query: 112 VAKGPRVTDLNIDDVV----YGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLY 167
           V+   +       D V    Y +   H  G +S+        +   P  ++ +EA  +  
Sbjct: 73  VS--SQHPRFREGDEVIATGYEIGVTH-FGGYSEYARLHGEWLVPLPKGLTLKEAMAIGT 129

Query: 168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVT-TCSGDAKD 226
            G TA  ++      GL  P    VLV GA+GGVG++AV +L      V   T      D
Sbjct: 130 AGFTAALSIHRLEEHGLT-PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD 188

Query: 227 LVTSLNPNLVIDYNE 241
            +  L    V+   +
Sbjct: 189 YLRVLGAKEVLARED 203

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 51.9 bits (125), Expect = 2e-07
 Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 62/205 (30%)

Query: 47  VKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD 106
            +   +    +LVE+ +  V   DV M  G                 +P +  P+ LG +
Sbjct: 35  FEISDIPRGSILVEILSAGVCGSDVHMFRG----------------EDPRVPLPIILGHE 78

Query: 107 FCGKIVAKGPRVTDLNIDDV---------------------------------VYGV--- 130
             G++V       DLN + +                                 VYG+   
Sbjct: 79  GAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRG 138

Query: 131 --IQPHKQGSFSK--LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY 186
               PH +G +S   ++  ++ ++ K       +  A  + +G TA+ A          +
Sbjct: 139 CSEYPHLRGCYSSHIVLDPETDVL-KVSEKDDLDVLAMAMCSGATAYHAFDEYPE---SF 194

Query: 187 PRDKRVLVLGASGGVGTMAVQLLKA 211
              K V++ GA G +G   V + ++
Sbjct: 195 A-GKTVVIQGA-GPLGLFGVVIARS 217

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 22/137 (16%)

Query: 149 LVHKKPSNISDEEAAGVL-YTGLTAWSALQITAALGLVYPRD-KRVLVLGASGGVGTMAV 206
           L+ + P  +    A G +   GLTA+  L           +  + VLV  A+G VG++  
Sbjct: 109 LLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCG-----VKGGETVLVSAAAGAVGSVVG 163

Query: 207 QLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHS-IAGAGP--YDV------ 256
           Q+ K    +VV     D K   +  +  +   +Y    ++   +  A P  YD       
Sbjct: 164 QIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223

Query: 257 --ILDAAGIPLDQINSY 271
              L+     L Q+  +
Sbjct: 224 GEFLNTV---LSQMKDF 237

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 53/307 (17%), Positives = 80/307 (26%), Gaps = 94/307 (30%)

Query: 45  DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104
              + P     D +V   AV+    D+  +                          + LG
Sbjct: 15  IEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEG----------------AIGERHNMILG 58

Query: 105 RDFCGKIVAKGPRVTDLNIDDVV---------------------------YGVIQPHKQG 137
            +  G++V  G  V D    D V                                  K G
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG 118

Query: 138 SFSKLI---LADSALVHKKPSNISDEEA---AGVLYTGLTAWSALQITAALGLVYPRDKR 191
            F +      AD  L    P  I  E A     ++ TG          A L  +   D  
Sbjct: 119 VFGEFFHVNDADMNLA-HLPKEIPLEAAVMIPDMMTTGFHG-------AELANIKLGDT- 169

Query: 192 VLVLGASGGVGTMAV---QLLKAWDIEVVTTCSGDAK--DLVTSLNPNLVIDYNEPEAMH 246
           V V+G  G VG M+V     L A     +          D+        +I+Y   + + 
Sbjct: 170 VCVIGI-GPVGLMSVAGANHLGA---GRIFAVGSRKHCCDIALEYGATDIINYKNGDIVE 225

Query: 247 SI----AGAGPYDVILDAAGIP--LDQ-------------INSY-------LPFLKTGKF 280
            I     G G  D ++ A G      Q             +N         +P  + G  
Sbjct: 226 QILKATDGKGV-DKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVG 284

Query: 281 SKFVTLR 287
                + 
Sbjct: 285 MGHKHIH 291

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 40.2 bits (95), Expect = 7e-04
 Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 23/142 (16%)

Query: 145 ADSALVHKKPSNISDEEAAGVL-YTGLTAWSALQITAALGLVYPRD-KRVLVLGASGGVG 202
              A    + +++      G+L   G+TA++      +     P++ + V V  ASG VG
Sbjct: 115 MTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCS-----PKEGETVYVSAASGAVG 169

Query: 203 TMAVQLLKAWDIEVVTTCSGDAK-DLVTS-LNPNLVIDY-NEPEAMHSIAGAGP--YDV- 256
            +  QL K     VV +     K DL+ +    +   +Y  E +   ++    P   D+ 
Sbjct: 170 QLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIY 229

Query: 257 -------ILDAAGIPLDQINSY 271
                  +LDA    L  +N +
Sbjct: 230 FENVGGKMLDAV---LVNMNMH 248

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	383
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.82
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.58
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.4
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.31
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.01
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.0
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.99
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.86
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.85
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.6
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	97.58
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.53
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.4
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.35
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.31
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.3
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.29
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.25
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.16
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.14
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.14
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.14
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.13
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.12
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.09
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.07
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.04
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.04
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.02
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.01
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.99
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.98
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.98
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.98
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.95
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.94
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.93
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.93
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.92
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.9
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.9
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.89
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.89
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.89
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	96.89
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.88
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.88
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.86
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.86
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.85
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.83
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.82
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.82
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.81
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.81
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.81
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.8
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.8
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.79
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.79
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.79
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.78
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.78
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.77
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.77
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.76
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.76
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.76
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.76
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.76
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.76
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.76
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.75
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.75
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.74
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.73
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.73
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.73
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.72
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.72
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.71
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.71
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.71
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.69
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.69
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.69
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.69
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.69
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.68
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.68
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.68
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.68
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.68
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.68
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.68
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.67
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.66
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.66
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.66
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.65
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.65
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.65
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.64
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.64
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.64
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.63
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.63
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	96.63
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.62
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.62
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.61
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.61
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.61
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.6
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.6
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.59
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.59
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.59
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.58
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.57
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.57
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.57
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.56
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.56
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.56
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.56
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.56
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.55
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.55
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.55
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.55
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.54
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.53
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.53
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.53
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.53
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.53
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.52
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.52
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.52
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.52
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.51
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.5
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.5
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.48
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.48
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.47
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.47
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.47
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.47
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.47
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.46
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.46
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.46
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.45
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.45
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.45
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.45
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.45
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.44
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.44
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.44
1spx_A	278	Short-chain reductase family member (5L265); paral	96.44
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.44
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.44
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.43
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.43
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.43
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.42
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.4
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.4
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.39
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.38
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.38
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.38
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.38
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.38
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.37
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.37
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.37
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.37
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.36
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.36
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.35
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.35
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.35
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.35
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.35
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.34
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.33
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.32
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.31
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.31
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.31
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.31
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.3
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.29
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.28
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.28
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.27
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.27
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.25
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.25
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.23
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.23
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.22
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.22
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.21
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.2
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.2
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.2
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.2
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.18
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.17
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.16
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.14
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.14
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.12
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.12
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.11
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.1
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.1
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.1
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.08
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.08
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.07
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.07
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.06
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.05
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.04
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.04
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.03
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.03
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.02
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.0
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.99
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.99
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.98
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.98
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.97
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.97
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.94
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.93
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.93
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	95.91
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.9
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.9
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.9
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.88
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	95.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.87
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.86
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.85
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.85
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.84
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.8
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.78
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.77
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.76
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.72
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	95.71
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.71
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.69
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.68
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.67
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.67
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.65
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.64
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.61
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.6
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.6
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.58
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	95.58
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.58
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	95.58
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	95.57
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.57
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.55
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.54
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.52
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.52
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.51
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.5
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.5
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.49
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.47
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.45
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.43
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.4
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	95.39
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.38
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	95.37
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	95.37
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.37
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.35
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.35
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.34
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.3
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.28
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.27
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.25
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	95.21
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.21
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.2
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.2
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.07
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.05
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	94.98
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.95
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	94.92
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	94.91
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	94.87
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	94.84
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	94.82
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	94.8
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	94.79
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	94.76
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	94.73
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	94.71
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	94.71
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	94.69
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	94.69
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	94.65
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	94.65
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	94.64
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	94.6
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.59
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	94.59
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	94.57
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	94.53
4e4y_A	244	Short chain dehydrogenase family protein; structur	94.53
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	94.51
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	94.51
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	94.5
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	94.49
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	94.49
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	94.45
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	94.45
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	94.44
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	94.43
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	94.43
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	94.34
4had_A	350	Probable oxidoreductase protein; structural genomi	94.32
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	94.31
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	94.29
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	94.26
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	94.26
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	94.26
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	94.25
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	94.22
4f6c_A	427	AUSA reductase domain protein; thioester reductase	94.22
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	94.21
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	94.19
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	94.16
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	94.12
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	94.11
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	94.1
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	94.08
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	94.05
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	94.04
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	94.04
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	94.0
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.98
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	93.97
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	93.93
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	93.91
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	93.85
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	93.83
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	93.8
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	93.77
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	93.77
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	93.75
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	93.73
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	93.69
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	93.56
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	93.53
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	93.51
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	93.48
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	93.47
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	93.46
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	93.44
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	93.39
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	93.38
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	93.33
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	93.32
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	93.31
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	93.31
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	93.29
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	93.27
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	93.24
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	93.19
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	93.19
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	93.15
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	93.07
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	93.03
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	93.01
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	93.0
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	93.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	92.97
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	92.95
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	92.95
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	92.91
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	92.88
1id1_A	153	Putative potassium channel protein; RCK domain, E.	92.86
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	92.83
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	92.77
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	92.7
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	92.68
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	92.53
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	92.51
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	92.48
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	92.47
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	92.44
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	92.42
2b25_A	336	Hypothetical protein; structural genomics, methyl	92.41
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	92.38
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	92.33
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	92.33
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	92.3
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	92.18
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	92.08
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	92.01
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	92.0
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	91.96

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=5.1e-53  Score=392.45  Aligned_cols=314  Identities=25%  Similarity=0.358  Sum_probs=264.6

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||+++.++++++.++++ +.|.|+|++|||||||.++|||++|++++.|....     ..      .....+|.++|
T Consensus         5 ~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~------~~~~~~p~v~G   72 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPKVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFV-----AK------KLKNNLPSGLG   72 (321)
T ss_dssp             CEEEEEEESSSCSGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHH-----HH------HHTTSCSBCCC
T ss_pred             ccceEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccc-----cc------cccCCCCCccc
Confidence            47999999999998889999 89999999999999999999999999999883100     00      01246789999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecC-CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQP-HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~-~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      ||++|+|+++|+++++|++||||+++.+. ..+|+|+||++++.+.++++|+++++++||+++++++|||+++ +.+++ 
T Consensus        73 ~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~-  150 (321)
T 3tqh_A           73 YDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEV-  150 (321)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTC-
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCC-
Confidence            99999999999999999999999998653 3469999999999999999999999999999999999999999 58888 


Q ss_pred             ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChH-HHHHHhcCCCccEEEEcCC
Q psy9949         184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE-AMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~i~~~~g~d~v~d~~g  262 (383)
                         ++|++|+|+||+|++|++++|+|+.+|++|++++++++.++++++|++.++|+++.+ +.+.+   .++|++|||+|
T Consensus       151 ---~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~---~g~D~v~d~~g  224 (321)
T 3tqh_A          151 ---KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAIS---TPVDAVIDLVG  224 (321)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCC---SCEEEEEESSC
T ss_pred             ---CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhc---cCCCEEEECCC
Confidence               999999999999999999999999999999999987788899999999999998876 55433   68999999999


Q ss_pred             CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHH
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEIN  342 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (383)
                      ++.....  +++++  ++|+++.++..           ....... .+..    +...+.+.     ......+++++++
T Consensus       225 ~~~~~~~--~~~l~--~~G~iv~~g~~-----------~~~~~~~-~~~~----~~~~~~~~-----~~~~~~~~~~~~~  279 (321)
T 3tqh_A          225 GDVGIQS--IDCLK--ETGCIVSVPTI-----------TAGRVIE-VAKQ----KHRRAFGL-----LKQFNIEELHYLG  279 (321)
T ss_dssp             HHHHHHH--GGGEE--EEEEEEECCST-----------THHHHHH-HHHH----TTCEEECC-----CCCCCHHHHHHHH
T ss_pred             cHHHHHH--HHhcc--CCCEEEEeCCC-----------Cchhhhh-hhhh----cceEEEEE-----ecCCCHHHHHHHH
Confidence            9877444  99999  99999998531           1111000 0111    12222221     1234578999999


Q ss_pred             HHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         343 KFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       343 ~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++++|++++.++++||++++++||+.+.+++..||+||++
T Consensus       280 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          280 KLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             HHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHCCCcccccccEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence            99999999999999999999999999999999999999985

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=6.2e-53  Score=396.78  Aligned_cols=320  Identities=24%  Similarity=0.347  Sum_probs=267.0

Q ss_pred             cCCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949          19 NHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE   98 (383)
Q Consensus        19 ~~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~   98 (383)
                      .++++|.+|||+++.++|.++.++++ +.|.|+|+++||||||.++|||++|++.+.|..+               ....
T Consensus        21 ~~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~   84 (353)
T 4dup_A           21 QSMSLPQEMRFVDLKSFGGPDVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP---------------PPKD   84 (353)
T ss_dssp             --CCCCSSEEEEEESSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSC---------------CCTT
T ss_pred             ecCCCChheeEEEEccCCCccceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---------------CCCC
Confidence            35667899999999999988889999 8999999999999999999999999999988621               2345


Q ss_pred             CCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH
Q psy9949          99 FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI  178 (383)
Q Consensus        99 ~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~  178 (383)
                      +|.++|||++|+|+++|+++++|++||||+++..   +|+|+||+++|.+.++++|+++++++||+++++++|||+++.+
T Consensus        85 ~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~---~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  161 (353)
T 4dup_A           85 ASPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN---GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQ  161 (353)
T ss_dssp             SCSSSCCEEEEEEEEECTTCCSCCTTCEEEEECS---SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTT
T ss_pred             CCCccccccEEEEEEECCCCCCCCCCCEEEEecC---CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHH
Confidence            7899999999999999999999999999999864   6999999999999999999999999999999999999999987


Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc--CCCcc
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYD  255 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d  255 (383)
                      .+++    +++++|||+||+|++|++++|+|+..|++|++++++ ++.++++++|++.++++++.++.+.+.+  ..++|
T Consensus       162 ~~~~----~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~D  237 (353)
T 4dup_A          162 MAGL----TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVD  237 (353)
T ss_dssp             TTCC----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEE
T ss_pred             hcCC----CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCce
Confidence            8888    999999999989999999999999999999999954 5678899999999999998888777665  35899


Q ss_pred             EEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchh-hhhhHHHHhhhhhccccccCCccEEEEEEcC-
Q psy9949         256 VILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG-LVKNAFDLLKSNFESGELCKTNTIRWGFFMP-  333 (383)
Q Consensus       256 ~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  333 (383)
                      ++|||+|+......  +++++  ++|+++.++......       .. ...  ..+..    ++..+.|..     ... 
T Consensus       238 vvid~~g~~~~~~~--~~~l~--~~G~iv~~g~~~~~~-------~~~~~~--~~~~~----~~~~i~g~~-----~~~~  295 (353)
T 4dup_A          238 IILDMIGAAYFERN--IASLA--KDGCLSIIAFLGGAV-------AEKVNL--SPIMV----KRLTVTGST-----MRPR  295 (353)
T ss_dssp             EEEESCCGGGHHHH--HHTEE--EEEEEEECCCTTCSE-------EEEEEC--HHHHH----TTCEEEECC-----STTS
T ss_pred             EEEECCCHHHHHHH--HHHhc--cCCEEEEEEecCCCc-------ccCCCH--HHHHh----cCceEEEEe-----cccc
Confidence            99999998765555  89999  999999986431100       00 000  01111    122222211     111 


Q ss_pred             C--------HHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         334 I--------PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       334 ~--------~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .        .+.++++++++++|+++++++++|+++++++||+.+.+++..||+||++
T Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          296 TAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             chhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            1        1237889999999999999999999999999999999999999999986

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.5e-52  Score=394.15  Aligned_cols=350  Identities=37%  Similarity=0.641  Sum_probs=270.5

Q ss_pred             cccceeeEEEeecCCCceeEe-eccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          23 YSTRTAAWQISSYGGADELQF-NDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~-~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      ++++|||+++.++|.+..+++ + +.|.|++ +++||||||.++|||++|++++.|..+.....++.+. ........+|
T Consensus        18 ~~~~mka~~~~~~g~~~~l~~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~-~~~~~~~~~P   95 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGKNEVLRFTQ-NMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPL-HVKIKGEEFP   95 (375)
T ss_dssp             CCCCEEEEEBSSCCSGGGCEEEE-EECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTT-CCSCTTTTCS
T ss_pred             cCccceeEEeccCCCccceEEec-cccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCcccccccccccc-ccccccccCC
Confidence            567899999999988888888 7 8999985 9999999999999999999999875211100000000 0000112378


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhh
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITA  180 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~  180 (383)
                      .++|||++|+|+++|++|++|++||||++......+|+|+||++++++.++++|+++++++||+++++++|||+++.+.+
T Consensus        96 ~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~  175 (375)
T 2vn8_A           96 LTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVG  175 (375)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             cccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999865445699999999999999999999999999999999999999997677


Q ss_pred             h----cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccE
Q psy9949         181 A----LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       181 ~----~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~  256 (383)
                      +    +    ++|++|+|+||+|++|++++|+|+..|++|++++++++.++++++|++.++++++.++.+++.+..++|+
T Consensus       176 ~~~~~~----~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~  251 (375)
T 2vn8_A          176 GLNDKN----CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDF  251 (375)
T ss_dssp             CCCTTT----CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred             cccccc----CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCE
Confidence            7    7    8999999999999999999999999999999999777888899999999999998888888887779999


Q ss_pred             EEEcCCCCcc-cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCH
Q psy9949         257 ILDAAGIPLD-QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIP  335 (383)
Q Consensus       257 v~d~~g~~~~-~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (383)
                      +|||+|+... ...+ +++++  ++|+++.+|..........++..........+....+  ....++..+.+.......
T Consensus       252 vid~~g~~~~~~~~~-~~~l~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~  326 (375)
T 2vn8_A          252 ILDNVGGSTETWAPD-FLKKW--SGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKAL--KHFWKGVHYRWAFFMASG  326 (375)
T ss_dssp             EEESSCTTHHHHGGG-GBCSS--SCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHH--HHHHTTCEEEECCCCCCH
T ss_pred             EEECCCChhhhhHHH-HHhhc--CCcEEEEeCCCcccccccccccchhheeehhhccccc--cccccCcceEEEEeCCCH
Confidence            9999999833 2332 88999  9999999864210000000000000000001111111  000044443322223457


Q ss_pred             HHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         336 YAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       336 ~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.++++++++++|++++.++++|||+++++||+.+.+++..||+||++
T Consensus       327 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          327 PCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            789999999999999999999999999999999999988889999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=4.5e-52  Score=392.33  Aligned_cols=316  Identities=25%  Similarity=0.312  Sum_probs=263.8

Q ss_pred             CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      .+|.+|||+++.++ +++.++++ +.|.|+|++|||||||.++|||++|++++.|..               .....+|.
T Consensus        23 ~m~~~mkA~~~~~~-~~~~l~~~-e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~---------------~~~~~~P~   85 (363)
T 3uog_A           23 MMSKWMQEWSTETV-APHDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGM---------------GLDLAFPF   85 (363)
T ss_dssp             CCCSEEEEEEBSCT-TTTCCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCT---------------TCCCCSSB
T ss_pred             cCchhhEEEEEccC-CCCCcEEE-eeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCC---------------CCCCCCCc
Confidence            36788999999987 45678999 899999999999999999999999999998861               12356799


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEe---------------------ecCCCCCCceEEEeecCcccccCCCCCCHH
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGV---------------------IQPHKQGSFSKLILADSALVHKKPSNISDE  160 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~---------------------~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~  160 (383)
                      ++|||++|+|+++|+++++|++||||++.                     .+...+|+|+||+++|.+.++++|++++++
T Consensus        86 v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  165 (363)
T 3uog_A           86 VPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAA  165 (363)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHH
T ss_pred             CcccceEEEEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHH
Confidence            99999999999999999999999999987                     122346999999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      +||+++++++|||+++.+.+++    ++|++|||+| +|++|++++|+|+.+|++|++++++ ++.++++++|++.++++
T Consensus       166 ~aa~l~~~~~ta~~al~~~~~~----~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~  240 (363)
T 3uog_A          166 EASTLPCAGLTAWFALVEKGHL----RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINR  240 (363)
T ss_dssp             HHHTTTTHHHHHHHHHTTTTCC----CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             HHhhcccHHHHHHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcC
Confidence            9999999999999999778888    9999999999 9999999999999999999999965 57788999999999996


Q ss_pred             CChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      +..++.+.+.+.   .++|++|||+|.......  +++++  ++|+++.+|......       ..     +++..    
T Consensus       241 ~~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~-------~~-----~~~~~----  300 (363)
T 3uog_A          241 LEEDWVERVYALTGDRGADHILEIAGGAGLGQS--LKAVA--PDGRISVIGVLEGFE-------VS-----GPVGP----  300 (363)
T ss_dssp             TTSCHHHHHHHHHTTCCEEEEEEETTSSCHHHH--HHHEE--EEEEEEEECCCSSCE-------EC-----CBTTH----
T ss_pred             CcccHHHHHHHHhCCCCceEEEECCChHHHHHH--HHHhh--cCCEEEEEecCCCcc-------cC-----cCHHH----
Confidence            656777777643   489999999996655555  89999  999999996532110       00     00000    


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                        +..++..+ .+......++++++++++++|+++++++++|+|+++++||+.+.+++ .||+||++
T Consensus       301 --~~~~~~~i-~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          301 --LLLKSPVV-QGISVGHRRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             --HHHTCCEE-EECCCCCHHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             --HHhCCcEE-EEEecCCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence              01122222 12233458899999999999999999999999999999999999998 89999986

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-51  Score=386.64  Aligned_cols=321  Identities=20%  Similarity=0.270  Sum_probs=260.0

Q ss_pred             ccccccCCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCC
Q psy9949          14 QLNKINHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSV   93 (383)
Q Consensus        14 ~~~~~~~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~   93 (383)
                      +..+.++..+|.+|||+++.+++.++.++++ +.|.|+|++|||||||.++|||++|++++.|..+              
T Consensus         9 ~~~~~~~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--------------   73 (342)
T 4eye_A            9 MGTLEAQTQGPGSMKAIQAQSLSGPEGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ--------------   73 (342)
T ss_dssp             ---------CCCEEEEEEECSSSGGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSS--------------
T ss_pred             ccCCcccccCCcceEEEEEecCCCCceeEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--------------
Confidence            3444556678999999999999988889999 8999999999999999999999999999988621              


Q ss_pred             CCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHH
Q psy9949          94 EPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAW  173 (383)
Q Consensus        94 ~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~  173 (383)
                       ....+|.++|||++|+|+++|++++ |++||||+++..   +|+|+||++++.+.++++|+++++++||+++++++|||
T Consensus        74 -~~~~~p~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~~~---~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  148 (342)
T 4eye_A           74 -LKMEPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFNF---IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMY  148 (342)
T ss_dssp             -SCCCSSBCCCSEEEEEEEECCTTSS-CCTTCEEEEECS---SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHH
T ss_pred             -CCCCCCCccceeEEEEEEEECCCCC-CCCCCEEEEecC---CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHH
Confidence             2346799999999999999999999 999999999863   69999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhcC-
Q psy9949         174 SALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAGA-  251 (383)
Q Consensus       174 ~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~-  251 (383)
                      +++.+.+++    ++|++|||+|++|++|++++|+|+.+|++|+++++ .++.++++++|++.+++++ .++.+.+.+. 
T Consensus       149 ~~l~~~~~~----~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~  223 (342)
T 4eye_A          149 FAYARRGQL----RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREAT  223 (342)
T ss_dssp             HHHHTTSCC----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHT
T ss_pred             HHHHHhcCC----CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHh
Confidence            999878888    99999999998899999999999999999999996 4577899999999999998 7777777653 


Q ss_pred             --CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEE
Q psy9949         252 --GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWG  329 (383)
Q Consensus       252 --~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (383)
                        .++|++|||+|++.....  +++++  ++|+++.+|...           +. ...+.+  .    ....++..+...
T Consensus       224 ~~~g~Dvvid~~g~~~~~~~--~~~l~--~~G~iv~~G~~~-----------~~-~~~~~~--~----~~~~~~~~i~g~  281 (342)
T 4eye_A          224 GGAGVDMVVDPIGGPAFDDA--VRTLA--SEGRLLVVGFAA-----------GG-IPTIKV--N----RLLLRNASLIGV  281 (342)
T ss_dssp             TTSCEEEEEESCC--CHHHH--HHTEE--EEEEEEEC----------------------CC--C----CGGGTTCEEEEC
T ss_pred             CCCCceEEEECCchhHHHHH--HHhhc--CCCEEEEEEccC-----------CC-CCccCH--H----HHhhcCCEEEEE
Confidence              379999999999765555  89999  999999986321           10 000111  0    112222222211


Q ss_pred             EE--------cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         330 FF--------MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       330 ~~--------~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      ..        ....+.++++++++++| ++++++++|+++++++||+.+.+++..||+||+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~  341 (342)
T 4eye_A          282 AWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLV  341 (342)
T ss_dssp             CHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEE
T ss_pred             ehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            10        00136789999999999 999999999999999999999999999999986

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=8.2e-52  Score=386.56  Aligned_cols=318  Identities=22%  Similarity=0.280  Sum_probs=263.9

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      +++|.+|||+++.++++++.++++ +.+.|+|++|||||||.++|||++|+++..|..                 ...+|
T Consensus         3 ~~~p~~mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-----------------~~~~P   64 (334)
T 3qwb_A            3 CTIPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIY-----------------PCEKP   64 (334)
T ss_dssp             --CCSEEEEEEESSSSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHHTSS-----------------CCCSS
T ss_pred             CCCchheEEEEEecCCCCceeEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHHCCCC-----------------CCCCC
Confidence            346889999999999998889999 899999999999999999999999999998861                 24579


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeec-CcccccCCCCCCHHH---HHhhhHHHHHHHHHH
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILAD-SALVHKKPSNISDEE---AAGVLYTGLTAWSAL  176 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~-~~~~~~ip~~~~~~~---aa~l~~~~~tA~~~l  176 (383)
                      .++|||++|+|+++|+++++|++||||+++.    +|+|+||++++ .+.++++|+++++++   |+++++.++|||+++
T Consensus        65 ~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~----~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l  140 (334)
T 3qwb_A           65 YVLGREASGTVVAKGKGVTNFEVGDQVAYIS----NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFT  140 (334)
T ss_dssp             EECCSEEEEEEEEECTTCCSCCTTCEEEEEC----SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccceEEEEEEECCCCCCCCCCCEEEEee----CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHH
Confidence            9999999999999999999999999999886    59999999999 999999999999999   888999999999999


Q ss_pred             HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---C
Q psy9949         177 QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---G  252 (383)
Q Consensus       177 ~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~  252 (383)
                      .+..++    +++++|||+||+|++|++++|+|+..|++|++++++ ++.++++++|++.++++++.++.+.+.+.   .
T Consensus       141 ~~~~~~----~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~  216 (334)
T 3qwb_A          141 NEAYHV----KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGK  216 (334)
T ss_dssp             HTTSCC----CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTS
T ss_pred             HHhccC----CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCC
Confidence            877888    999999999999999999999999999999999965 56788999999999999988888877653   4


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM  332 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (383)
                      ++|++|||+|+......  +++++  ++|+++.+|......   ..+..      ..+..    +++.+.+...  ..+.
T Consensus       217 g~D~vid~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~---~~~~~------~~~~~----~~~~~~~~~~--~~~~  277 (334)
T 3qwb_A          217 GVDASFDSVGKDTFEIS--LAALK--RKGVFVSFGNASGLI---PPFSI------TRLSP----KNITLVRPQL--YGYI  277 (334)
T ss_dssp             CEEEEEECCGGGGHHHH--HHHEE--EEEEEEECCCTTCCC---CCBCG------GGGTT----TTCEEECCCG--GGGS
T ss_pred             CceEEEECCChHHHHHH--HHHhc--cCCEEEEEcCCCCCC---CCcch------hhhhh----CceEEEEEEe--cccc
Confidence            79999999998555554  89999  999999997532110   00000      00111    1122221110  0001


Q ss_pred             CC----HHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         333 PI----PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       333 ~~----~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..    .+.++++++++++|++++.++++||++++++||+.+.+++..||+||++
T Consensus       278 ~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          278 ADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             CSHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEec
Confidence            12    3456899999999999999999999999999999999999999999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-51  Score=386.78  Aligned_cols=325  Identities=22%  Similarity=0.290  Sum_probs=256.6

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||+++++++.++.++++ +.+.|+|++|||+|||.++|||++|++++.|..               .....+|.++|
T Consensus         2 m~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~---------------~~~~~~p~v~G   65 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNI---------------DNPPKTPLVPG   65 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHHTCS---------------SSCCCSSBCCC
T ss_pred             ceeEEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCc---------------CCCCCCCcccc
Confidence            57999999999988889999 899999999999999999999999999998862               12356799999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      ||++|+|+++|+++++|++||||+++..   +|+|+||+++|.+.++++|+++++++||+++++++|||+++.+.+++  
T Consensus        66 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~---~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~--  140 (349)
T 4a27_A           66 FECSGIVEALGDSVKGYEIGDRVMAFVN---YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANL--  140 (349)
T ss_dssp             SEEEEEEEEECTTCCSCCTTCEEEEECS---SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCC--
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEecC---CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence            9999999999999999999999999863   69999999999999999999999999999999999999999878888  


Q ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcC
Q psy9949         185 VYPRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAA  261 (383)
Q Consensus       185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~  261 (383)
                        ++|++|+|+|++|++|++++|+|+.+| ++|++++++++.+.++ +|++.+++ .+.++.+.+++.  +++|+||||+
T Consensus       141 --~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~  216 (349)
T 4a27_A          141 --REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCL  216 (349)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEEC
T ss_pred             --CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECC
Confidence              999999999988999999999999986 5999999777778777 99999999 677777777653  5899999999


Q ss_pred             CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchh--hhhhHHHHhhhhhccccccCCccEEEEEEc-------
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPG--LVKNAFDLLKSNFESGELCKTNTIRWGFFM-------  332 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  332 (383)
                      |++.....  +++++  ++|+++.+|...........+...  .......+....+    ..++..+. +...       
T Consensus       217 g~~~~~~~--~~~l~--~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~i~-g~~~~~~~~~~  287 (349)
T 4a27_A          217 CGDNTGKG--LSLLK--PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKL----YEENKVIA-GFSLLNLLFKQ  287 (349)
T ss_dssp             C---------CTTEE--EEEEEEEEC-------------------------CHHHH----HHHTCEEE-EECHHHHHHTS
T ss_pred             CchhHHHH--HHHhh--cCCEEEEECCCcccccccccccccccccccccccCHHHH----hhcCceEE-EEeehheeccc
Confidence            99877544  99999  999999997532111100000000  0000000111111    11111211 1111       


Q ss_pred             ----CCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         333 ----PIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       333 ----~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                          ...++++++++++++|++++.++++|+++++++|++.+.+++..||+||++
T Consensus       288 ~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          288 GRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEET
T ss_pred             cchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEec
Confidence                116789999999999999999999999999999999999999999999975

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.2e-51  Score=384.28  Aligned_cols=315  Identities=24%  Similarity=0.343  Sum_probs=259.6

Q ss_pred             CCcccceeeEEEeec---CCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949          21 LKYSTRTAAWQISSY---GGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL   97 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~---g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~   97 (383)
                      ...+++|||+++.++   +.+..++++ +.|.|+|+++||||||.++|||++|++++.|.                ....
T Consensus        17 ~~~m~~MkA~~~~~~~~~~~~~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~----------------~~~~   79 (363)
T 4dvj_A           17 NLYFQSMKAVGYNKPAPITDDASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRST----------------PPDG   79 (363)
T ss_dssp             --CCCEEEEEEBSSCCCTTSTTSSEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHC----------------CC--
T ss_pred             hhhhheeEEEEEeccCCCCCCceEEEe-ecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCC----------------CCCC
Confidence            334578999999988   567788999 89999999999999999999999999999886                2235


Q ss_pred             CCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHH
Q psy9949          98 EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQ  177 (383)
Q Consensus        98 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~  177 (383)
                      .+|.++|||++|+|+++|+++++|++||||+++.....+|+|+||+++|.+.++++|+++++++||+++++++|||+++.
T Consensus        80 ~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~  159 (363)
T 4dvj_A           80 TDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFF  159 (363)
T ss_dssp             CCSBCCCCCEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHH
T ss_pred             CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHH
Confidence            67899999999999999999999999999998765455799999999999999999999999999999999999999998


Q ss_pred             HhhhcCccCC-----CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949         178 ITAALGLVYP-----RDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       178 ~~~~~~~~~~-----~~~~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~  250 (383)
                      +..++    +     ++++|||+||+|++|++++|+|+. .|++|++++++ ++.++++++|++.++++++ ++.+.+.+
T Consensus       160 ~~~~~----~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~  234 (363)
T 4dvj_A          160 DRLDV----NKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAA  234 (363)
T ss_dssp             TTSCT----TSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHT
T ss_pred             HhhCc----CcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHH
Confidence            78887    7     899999999999999999999998 58899999965 5778999999999999875 57777765


Q ss_pred             C--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEE
Q psy9949         251 A--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW  328 (383)
Q Consensus       251 ~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (383)
                      .  +++|+||||+|++.....+ +++++  ++|+++.++.+.       .+...      .+         ..++..+..
T Consensus       235 ~~~~g~Dvvid~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~-------~~~~~------~~---------~~k~~~i~~  289 (363)
T 4dvj_A          235 LGLGAPAFVFSTTHTDKHAAEI-ADLIA--PQGRFCLIDDPS-------AFDIM------LF---------KRKAVSIHH  289 (363)
T ss_dssp             TCSCCEEEEEECSCHHHHHHHH-HHHSC--TTCEEEECSCCS-------SCCGG------GG---------TTTTCEEEE
T ss_pred             hcCCCceEEEECCCchhhHHHH-HHHhc--CCCEEEEECCCC-------ccchH------HH---------hhccceEEE
Confidence            4  4799999999987543433 89999  999999985321       00000      00         111111111


Q ss_pred             EEEcC------------CHHHHHHHHHHHHcCCcccccceee---cCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         329 GFFMP------------IPYAVKEINKFIERGQIKPVIDSKY---NFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       329 ~~~~~------------~~~~~~~~~~l~~~g~l~~~~~~~~---~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                       ....            ..+.++++++++++|++++.+.+++   +++++++||+.+.+++..||+||++
T Consensus       290 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          290 -ELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             -CCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             -EEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence             0000            1467899999999999999887766   9999999999999999999999974

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.1e-50  Score=379.73  Aligned_cols=322  Identities=20%  Similarity=0.232  Sum_probs=262.3

Q ss_pred             ccceeeEEEeecCCC-ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          24 STRTAAWQISSYGGA-DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~-~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      +++||++++.++|+| +.++++ +.|.|+|++|||||||.++|||++|++.+.|..+               ....+|.+
T Consensus         2 ~~~mka~~~~~~g~p~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~i   65 (340)
T 3gms_A            2 SLHGKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYA---------------HRIPLPNI   65 (340)
T ss_dssp             CCEEEEEEESSCSCHHHHEEEE-EEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTT---------------TTSCSSBC
T ss_pred             CcccEEEEEecCCCchheEEEE-ecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCC---------------CCCCCCCc
Confidence            468999999999987 668999 8999999999999999999999999999988621               23567999


Q ss_pred             ccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhc
Q psy9949         103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAAL  182 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~  182 (383)
                      +|||++|+|+++|+++++|++||||+++..   +|+|+||+++|.+.++++|+++++++||++++.++|||+++.+.+++
T Consensus        66 ~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~---~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~  142 (340)
T 3gms_A           66 PGYEGVGIVENVGAFVSRELIGKRVLPLRG---EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNL  142 (340)
T ss_dssp             CCSCCEEEEEEECTTSCGGGTTCEEEECSS---SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCC
T ss_pred             CCcceEEEEEEeCCCCCCCCCCCEEEecCC---CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhccc
Confidence            999999999999999999999999998753   69999999999999999999999999999999999999999888888


Q ss_pred             CccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEE
Q psy9949         183 GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVIL  258 (383)
Q Consensus       183 ~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~  258 (383)
                          ++|++|||+|++|++|++++|+|+.+|++|+++++ .++.++++++|++.++++++.++.+.+.+.   .++|++|
T Consensus       143 ----~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          143 ----QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             ----CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEE
Confidence                99999999998889999999999999999999995 567889999999999999988888777653   4899999


Q ss_pred             EcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc-cccccCCccEEEEEEcCCHHH
Q psy9949         259 DAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE-SGELCKTNTIRWGFFMPIPYA  337 (383)
Q Consensus       259 d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  337 (383)
                      ||+|++.....  +++++  ++|+++.+|......     .  ...  .+.. ...+. .....+.... ........++
T Consensus       219 d~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~-----~--~~~--~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~  283 (340)
T 3gms_A          219 DSIGGPDGNEL--AFSLR--PNGHFLTIGLLSGIQ-----V--NWA--EIVT-KAKVHANIFHLRHWND-EVSPYKWQET  283 (340)
T ss_dssp             ESSCHHHHHHH--HHTEE--EEEEEEECCCTTSCC-----C--CHH--HHHH-TSCCEEEECCHHHHHH-HSCHHHHHHH
T ss_pred             ECCCChhHHHH--HHHhc--CCCEEEEEeecCCCC-----C--CHH--Hhhh-cccceEEEEEehhhhh-hcCHHHHHHH
Confidence            99999877665  78999  999999997532110     0  000  0000 00000 0000000000 0000113578


Q ss_pred             HHHHHHHHHcCCccc-ccceeecCCCHHHHHHHHhcCCC-CCeEEEeC
Q psy9949         338 VKEINKFIERGQIKP-VIDSKYNFCELPTAFEKVQQGHL-RGKIILNA  383 (383)
Q Consensus       338 ~~~~~~l~~~g~l~~-~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~~  383 (383)
                      ++++++++++|++++ .++++||++++++||+.+.+++. .||++|++
T Consensus       284 ~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          284 FRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            999999999999987 57899999999999999999885 49999975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.3e-50  Score=377.02  Aligned_cols=315  Identities=22%  Similarity=0.263  Sum_probs=261.6

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||++++++|+++.++++ +.+.|+|++|||+|||.++|||++|+++..|..                +...+|.++|||
T Consensus         2 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~~~~~p~v~G~e   64 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLY----------------PAPFLPSGLGAE   64 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTSS----------------CCSSSSBCCCCC
T ss_pred             cEEEEEecCCCcceeEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCC----------------CCCCCCCCCCce
Confidence            999999999999889999 899999999999999999999999999998862                224679999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|+++++|++||||++...  .+|+|+||+++|.+.++++|+++++++||++++.++|||+++.+.+++    
T Consensus        65 ~~G~V~~vG~~v~~~~~GdrV~~~~~--~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~----  138 (325)
T 3jyn_A           65 GAGVVEAVGDEVTRFKVGDRVAYGTG--PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQV----  138 (325)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEESSS--SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCC----
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecC--CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCC----
Confidence            99999999999999999999988752  359999999999999999999999999999999999999999888888    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g  262 (383)
                      +++++|||+||+|++|++++|+|+..|++|++++++ ++.++++++|++.++++++.++.+.+.+.   .++|++|||+|
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  218 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG  218 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence            999999999999999999999999999999999955 56788899999999999988888877653   47999999999


Q ss_pred             CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc----CCHHHH
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM----PIPYAV  338 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  338 (383)
                      +......  +++++  ++|+++.+|......   ..+..    .  .+....   ...+.+...  +.+.    ...+.+
T Consensus       219 ~~~~~~~--~~~l~--~~G~iv~~g~~~~~~---~~~~~----~--~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~  280 (325)
T 3jyn_A          219 QDTWLTS--LDSVA--PRGLVVSFGNASGPV---SGVNL----G--ILAQKD---SVYVTRPTL--GSYANNAQNLQTMA  280 (325)
T ss_dssp             GGGHHHH--HTTEE--EEEEEEECCCTTCCC---CSCCT----H--HHHHTT---SCEEECCCH--HHHSCSTTHHHHHH
T ss_pred             hHHHHHH--HHHhc--CCCEEEEEecCCCCC---CCCCH----H--HHhhcC---cEEEEeeee--eeecCCHHHHHHHH
Confidence            8655554  89999  999999997532110   00100    0  011110   011111000  0001    124556


Q ss_pred             HHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         339 KEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       339 ~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +++++++++|++++.++++||++++++||+.+.+++..||+||.
T Consensus       281 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~  324 (325)
T 3jyn_A          281 DELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILI  324 (325)
T ss_dssp             HHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEE
T ss_pred             HHHHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            79999999999999899999999999999999999999999986

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=6.7e-51  Score=381.99  Aligned_cols=311  Identities=23%  Similarity=0.311  Sum_probs=258.6

Q ss_pred             cceeeEEEeecC---CCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          25 TRTAAWQISSYG---GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        25 ~~~~a~~~~~~g---~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      |+|||++++++|   .++.++++ +.|.|+|++|||||||.++|||++|++...|.                  ...+|.
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~------------------~~~~p~   61 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMD------------------VSKAPR   61 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHTTSC------------------CSSSCB
T ss_pred             CCcEEEEEEeccccCCCceeEec-cccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC------------------CCCCCc
Confidence            479999999988   56789999 89999999999999999999999999988774                  245789


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA  181 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~  181 (383)
                      ++|||++|+|+++|+++++|++||||+++.....+|+|+||+++|.+.++++|+++++++||+++++++|||+++.+.++
T Consensus        62 i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~  141 (346)
T 3fbg_A           62 VLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFG  141 (346)
T ss_dssp             CCCCCEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSC
T ss_pred             CcCCccEEEEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcC
Confidence            99999999999999999999999999987655567999999999999999999999999999999999999999987888


Q ss_pred             cCccCC------CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--C
Q psy9949         182 LGLVYP------RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--G  252 (383)
Q Consensus       182 ~~~~~~------~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~  252 (383)
                      +    +      ++++|||+||+|++|++++|+|+.+|++|++++++ ++.++++++|++.++++++ ++.+.+.+.  .
T Consensus       142 ~----~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~  216 (346)
T 3fbg_A          142 I----SRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQGIE  216 (346)
T ss_dssp             C----CSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHHTCC
T ss_pred             C----ccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHhCCC
Confidence            7    7      89999999889999999999999999999999964 5778999999999999875 566666543  4


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE-
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF-  331 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  331 (383)
                      ++|++|||+|++.....+ +++++  ++|+++.++....      .+...      .+         ..++..+..... 
T Consensus       217 g~Dvv~d~~g~~~~~~~~-~~~l~--~~G~iv~~~~~~~------~~~~~------~~---------~~~~~~~~~~~~~  272 (346)
T 3fbg_A          217 LVDYVFCTFNTDMYYDDM-IQLVK--PRGHIATIVAFEN------DQDLN------AL---------KPKSLSFSHEFMF  272 (346)
T ss_dssp             CEEEEEESSCHHHHHHHH-HHHEE--EEEEEEESSCCSS------CBCGG------GG---------TTTTCEEEECCTT
T ss_pred             CccEEEECCCchHHHHHH-HHHhc--cCCEEEEECCCCC------CCccc------cc---------cccceEEEEEEEe
Confidence            799999999987653333 89999  9999998854210      00000      00         011111110000 


Q ss_pred             ----------cCCHHHHHHHHHHHHcCCcccccceee---cCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         332 ----------MPIPYAVKEINKFIERGQIKPVIDSKY---NFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       332 ----------~~~~~~~~~~~~l~~~g~l~~~~~~~~---~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                                ....+.++++++++++|++++.++++|   +++++++||+.+.+++..||+||++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          273 ARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             HHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEec
Confidence                      001467899999999999999988887   8999999999999999999999974

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.5e-50  Score=380.08  Aligned_cols=312  Identities=21%  Similarity=0.254  Sum_probs=256.2

Q ss_pred             CCcccceeeEEEeecCCCceeEeecc--ccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDN--VKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE   98 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~--~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~   98 (383)
                      |.+|++|||+++.+++.+  ++++ +  .|.|+|+++||||||.++|||++|++.+.|..                ....
T Consensus         1 M~~p~~mka~~~~~~~~~--l~~~-~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~~~~   61 (360)
T 1piw_A            1 MSYPEKFEGIAIQSHEDW--KNPK-KTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW----------------GNMK   61 (360)
T ss_dssp             CCTTTCEEEEEECCSSST--TSCE-EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTT----------------SCCC
T ss_pred             CCCChheEEEEEecCCCC--eeEE-eccccCCCCCCCeEEEEEEEeccchhhHHHhcCCC----------------CCCC
Confidence            346788999999988754  6677 7  89999999999999999999999999998851                2245


Q ss_pred             CCccccCceeEEEEecCCCCC-CCCCCCEEEEe--------------------------e------cCCCCCCceEEEee
Q psy9949          99 FPLTLGRDFCGKIVAKGPRVT-DLNIDDVVYGV--------------------------I------QPHKQGSFSKLILA  145 (383)
Q Consensus        99 ~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd~V~~~--------------------------~------~~~~~g~~a~~~~v  145 (383)
                      +|.++|||++|+|+++|++|+ +|++||||+..                          .      +...+|+|+||+++
T Consensus        62 ~p~v~GhE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v  141 (360)
T 1piw_A           62 MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRV  141 (360)
T ss_dssp             SSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEE
T ss_pred             CCcccCcCceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEE
Confidence            789999999999999999999 99999999531                          1      11246999999999


Q ss_pred             cCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch
Q psy9949         146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA  224 (383)
Q Consensus       146 ~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~  224 (383)
                      |++.++++|+++++++||+++++++|||+++.. +++    +++++|||+|+ |++|++++|+|+.+|++|+++++ .++
T Consensus       142 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~----~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~  215 (360)
T 1piw_A          142 HEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGC----GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRK  215 (360)
T ss_dssp             EGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTC----STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTT
T ss_pred             chhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCC----CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            999999999999999999999999999999984 788    99999999996 99999999999999999999994 567


Q ss_pred             HHHHHhcCCCeeeeCCCh-HHHHHHhcCCCccEEEEcCCC--CcccccccccccccCCCceEEEecCCCccCCCCCCCch
Q psy9949         225 KDLVTSLNPNLVIDYNEP-EAMHSIAGAGPYDVILDAAGI--PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVP  301 (383)
Q Consensus       225 ~~~~~~lg~~~v~~~~~~-~~~~~i~~~~g~d~v~d~~g~--~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~  301 (383)
                      .++++++|++.++++++. ++.+.+.  +++|++||++|+  ......+ +++++  ++|+++.+|....          
T Consensus       216 ~~~~~~lGa~~v~~~~~~~~~~~~~~--~~~D~vid~~g~~~~~~~~~~-~~~l~--~~G~iv~~g~~~~----------  280 (360)
T 1piw_A          216 REDAMKMGADHYIATLEEGDWGEKYF--DTFDLIVVCASSLTDIDFNIM-PKAMK--VGGRIVSISIPEQ----------  280 (360)
T ss_dssp             HHHHHHHTCSEEEEGGGTSCHHHHSC--SCEEEEEECCSCSTTCCTTTG-GGGEE--EEEEEEECCCCCS----------
T ss_pred             HHHHHHcCCCEEEcCcCchHHHHHhh--cCCCEEEECCCCCcHHHHHHH-HHHhc--CCCEEEEecCCCC----------
Confidence            889999999999998776 6666655  589999999998  4443333 89999  9999999864310          


Q ss_pred             hhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCC--HHHHHHHHhcCCCCCeE
Q psy9949         302 GLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCE--LPTAFEKVQQGHLRGKI  379 (383)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~--~~~a~~~l~~~~~~gkv  379 (383)
                        . ..++.  .    .+..++..+. +....+.++++++++++++|++++.+ ++|||++  +++||+.+.+++..||+
T Consensus       281 --~-~~~~~--~----~~~~~~~~i~-g~~~~~~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKv  349 (360)
T 1piw_A          281 --H-EMLSL--K----PYGLKAVSIS-YSALGSIKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRF  349 (360)
T ss_dssp             --S-CCEEE--C----GGGCBSCEEE-ECCCCCHHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEE
T ss_pred             --c-cccCH--H----HHHhCCeEEE-EEecCCHHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEE
Confidence              0 00010  0    1122222222 33334578899999999999999887 8999999  99999999998888999


Q ss_pred             EEeC
Q psy9949         380 ILNA  383 (383)
Q Consensus       380 vl~~  383 (383)
                      ||++
T Consensus       350 vi~~  353 (360)
T 1piw_A          350 TLVG  353 (360)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9974

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.3e-51  Score=380.46  Aligned_cols=307  Identities=20%  Similarity=0.254  Sum_probs=244.5

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||+++.+  .++.++++ +.|.|+|+++||||||.++|||++|++.+.|.                .....+|.++|
T Consensus         3 ~tMka~~~~~--~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~----------------~~~~~~p~i~G   63 (315)
T 3goh_A            3 EQHQVWAYQT--KTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKAN----------------PINWSNGHVPG   63 (315)
T ss_dssp             CEEEEEEEET--TTTEEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHHC----------------TTCCCTTCCCC
T ss_pred             cceEEEEEeC--CCCeeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHcCC----------------CCcCCCCCEee
Confidence            3699999996  45668999 89999999999999999999999999999886                22346799999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGL  184 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  184 (383)
                      ||++|+|+++|+++++|++||||++......+|+|+||+++|.+.++++|+++++++||+++++++|||+++ +.+++  
T Consensus        64 ~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~--  140 (315)
T 3goh_A           64 VDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPL--  140 (315)
T ss_dssp             SEEEEEEEEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCC--
T ss_pred             eeeEEEEEEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCC--
Confidence            999999999999999999999999987666679999999999999999999999999999999999999999 68888  


Q ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         185 VYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       185 ~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                        ++|++|||+|+ |++|++++|+|+.+|++|++++++++.++++++|++.+++  +   .+++  ..++|++|||+|++
T Consensus       141 --~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~--d---~~~v--~~g~Dvv~d~~g~~  210 (315)
T 3goh_A          141 --TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYR--E---PSQV--TQKYFAIFDAVNSQ  210 (315)
T ss_dssp             --CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEES--S---GGGC--CSCEEEEECC----
T ss_pred             --CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEc--C---HHHh--CCCccEEEECCCch
Confidence              99999999997 9999999999999999999999667889999999998884  2   3333  46899999999998


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh-ccccccCCccEEEEEEc---CCHHHHHH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF-ESGELCKTNTIRWGFFM---PIPYAVKE  340 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~  340 (383)
                      .....  +++++  ++|+++.++.....             .........+ .+...+.+.... ....   ...+.+++
T Consensus       211 ~~~~~--~~~l~--~~G~~v~~g~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  272 (315)
T 3goh_A          211 NAAAL--VPSLK--ANGHIICIQDRIPA-------------PIDPAFTRTISYHEIALGALHDF-GDRQDWQILMQQGEA  272 (315)
T ss_dssp             ---TT--GGGEE--EEEEEEEECCC-----------------------CCSEEEEECGGGHHHH-CCHHHHHHHHHHHHH
T ss_pred             hHHHH--HHHhc--CCCEEEEEeCCCCc-------------cccchhhhcceeeEEEeeccccc-CChhHHHHHHHHHHH
Confidence            77554  89999  99999998542100             0001110111 111122211100 0000   11346889


Q ss_pred             HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++++++|++++.++++|||+++++||+.+.  +..||+||++
T Consensus       273 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          273 LLTLIAQGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             HHHHHHTTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEES
T ss_pred             HHHHHHCCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEe
Confidence            9999999999999999999999999999998  6779999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=4e-50  Score=381.18  Aligned_cols=319  Identities=17%  Similarity=0.158  Sum_probs=258.3

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      ..+|++|||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|.                .....+|
T Consensus         3 ~~~~~tmkA~v~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----------------~~~~~~P   63 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKP--LVIE-DVQVAPPQAGEVRIKILYTALCHTDAYTWSGK----------------DPEGLFP   63 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTC----------------CTTCCSS
T ss_pred             cccceeeEEEEEecCCCc--cEEE-EecCCCCCCCeEEEEEEEeecCHHHHHHhcCC----------------CCCCCCC
Confidence            456889999999998876  7888 89999999999999999999999999999886                2335689


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEeecC----------------------------------------------C
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP----------------------------------------------H  134 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~  134 (383)
                      .++|||++|+|+++|++|++|++||||++....                                              .
T Consensus        64 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~  143 (378)
T 3uko_A           64 CILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFM  143 (378)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCT
T ss_pred             ccCCccceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCccccccc
Confidence            999999999999999999999999999865321                                              0


Q ss_pred             CCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q psy9949         135 KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI  214 (383)
Q Consensus       135 ~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~  214 (383)
                      ..|+|+||+++|.+.++++|+++++++||.+++++.|||+++.+.+++    +++++|||+|+ |++|++++|+|+.+|+
T Consensus       144 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~----~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga  218 (378)
T 3uko_A          144 GTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKV----EPGSNVAIFGL-GTVGLAVAEGAKTAGA  218 (378)
T ss_dssp             TTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCC----CTTCCEEEECC-SHHHHHHHHHHHHHTC
T ss_pred             CCcceEeEEEechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCC----CCCCEEEEECC-CHHHHHHHHHHHHcCC
Confidence            126999999999999999999999999999999999999999878888    99999999995 9999999999999999


Q ss_pred             -EEEEEe-cCchHHHHHhcCCCeeeeCC--ChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEec
Q psy9949         215 -EVVTTC-SGDAKDLVTSLNPNLVIDYN--EPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLR  287 (383)
Q Consensus       215 -~Vi~~~-~~~~~~~~~~lg~~~v~~~~--~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~  287 (383)
                       +|++++ +++++++++++|++.+++++  +.++.+.+++.  +++|+||||+|++.....+ +++++  ++ |+++.+|
T Consensus       219 ~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~-~~~l~--~g~G~iv~~G  295 (378)
T 3uko_A          219 SRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAA-LECCH--KGWGTSVIVG  295 (378)
T ss_dssp             SCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH-HHTBC--TTTCEEEECS
T ss_pred             CeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHH-HHHhh--ccCCEEEEEc
Confidence             899999 55788999999999999987  56777777653  4899999999996554443 88999  96 9999986


Q ss_pred             CCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHH
Q psy9949         288 SPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPT  365 (383)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~  365 (383)
                      ......    ..  ..  ....+..     ...+.|...   ......++++++++++++|+++  ++++++|||+++++
T Consensus       296 ~~~~~~----~~--~~--~~~~~~~-----~~~i~g~~~---~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~  359 (378)
T 3uko_A          296 VAASGQ----EI--ST--RPFQLVT-----GRVWKGTAF---GGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINK  359 (378)
T ss_dssp             CCCTTC----CE--EE--CTHHHHT-----TCEEEECSG---GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHH
T ss_pred             ccCCCC----cc--cc--CHHHHhc-----CcEEEEEEe---cCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHH
Confidence            432110    00  00  0011111     112221110   0001367899999999999886  56899999999999


Q ss_pred             HHHHHhcCCCCCeEEEeC
Q psy9949         366 AFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       366 a~~~l~~~~~~gkvvl~~  383 (383)
                      ||+.+.+++.. |+||++
T Consensus       360 A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          360 AFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             HHHHTTCTTCS-EEEEET
T ss_pred             HHHHHHCCCce-EEEEec
Confidence            99999988875 999975

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=5.7e-50  Score=374.96  Aligned_cols=310  Identities=20%  Similarity=0.304  Sum_probs=257.4

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      +|||+++.+++++  ++++ +.|.|+|++|||||||.++|||++|++.+.|..+               ....+|.++||
T Consensus         2 ~MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~P~v~G~   63 (340)
T 3s2e_A            2 MMKAAVVRAFGAP--LTID-EVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWP---------------VKPTLPFIPGH   63 (340)
T ss_dssp             EEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSS---------------SCCCSSBCCCS
T ss_pred             ceEEEEEecCCCC--CEEE-EccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCC---------------CCCCCCcccCC
Confidence            5999999988766  7888 8999999999999999999999999999988621               22468999999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEe-------------------------ecCCCCCCceEEEeecCcccccCCCCCCHH
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGV-------------------------IQPHKQGSFSKLILADSALVHKKPSNISDE  160 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~-------------------------~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~  160 (383)
                      |++|+|+++|+++++|++||||+..                         .+...+|+|+||+++|.+.++++|++++++
T Consensus        64 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  143 (340)
T 3s2e_A           64 EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFV  143 (340)
T ss_dssp             EEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHH
T ss_pred             cceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHH
Confidence            9999999999999999999999532                         112346999999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      +||+++++++|||+++. ..++    +++++|||+| +|++|++++|+|+.+|++|++++++ ++.++++++|++.++++
T Consensus       144 ~aa~l~~~~~ta~~~l~-~~~~----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~  217 (340)
T 3s2e_A          144 EIAPILCAGVTVYKGLK-VTDT----RPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNA  217 (340)
T ss_dssp             HHGGGGTHHHHHHHHHH-TTTC----CTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             HhhcccchhHHHHHHHH-HcCC----CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            99999999999999995 7788    9999999999 5999999999999999999999854 57789999999999999


Q ss_pred             CChHHHHHHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         240 NEPEAMHSIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       240 ~~~~~~~~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      ++.++.+.+.+ .+++|++||++|+......+ +++++  ++|+++.+|...       +   ........+.       
T Consensus       218 ~~~~~~~~~~~~~g~~d~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~-------~---~~~~~~~~~~-------  277 (340)
T 3s2e_A          218 RDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQA-IGMVR--RGGTIALNGLPP-------G---DFGTPIFDVV-------  277 (340)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHH-HHHEE--EEEEEEECSCCS-------S---EEEEEHHHHH-------
T ss_pred             CCcCHHHHHHHhCCCCCEEEEeCCCHHHHHHH-HHHhc--cCCEEEEeCCCC-------C---CCCCCHHHHH-------
Confidence            98888877765 24899999999987665443 89999  999999986421       0   0000111111       


Q ss_pred             cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                        .++..+ .+....+.++++++++++++|++++.+ +.++|+++++||+.+.+++..||+||++
T Consensus       278 --~~~~~i-~g~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          278 --LKGITI-RGSIVGTRSDLQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             --HTTCEE-EECCSCCHHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             --hCCeEE-EEEecCCHHHHHHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEec
Confidence              122222 133344688999999999999998764 5789999999999999999999999975

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=9.6e-50  Score=374.81  Aligned_cols=308  Identities=16%  Similarity=0.268  Sum_probs=254.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++...+ +..++++ +.|.|+|+||||||||.++|||++|+++++|.                 ...++|.++|||
T Consensus         1 MKA~v~~~~~-~~~~~l~-e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~-----------------~~~~~p~i~GhE   61 (348)
T 4eez_A            1 MKAAVVRHNP-DGYADLV-EKELRAIKPNEALLDMEYCGVCHTDLHVAAGD-----------------FGNKAGTVLGHE   61 (348)
T ss_dssp             CEEEEECSSC-CSSEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTT-----------------TCCCTTCBCCSE
T ss_pred             CeEEEEEcCC-CCcEEEE-EeECCCCCCCEEEEEEEEEEECHHHHHHhcCC-----------------CCCCCCccccee
Confidence            8999986533 3457888 89999999999999999999999999999986                 224678999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee-------------------------cCCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI-------------------------QPHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++|++|++||||++..                         ....+|+|+||++++.+.++++|+++++++
T Consensus        62 ~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~  141 (348)
T 4eez_A           62 GIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIE  141 (348)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHH
T ss_pred             EEEEEEEECceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHH
Confidence            9999999999999999999997531                         123469999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      |++++++++|||++++ .+++    ++|++|+|+| +|++|.+++|+|+.+ |++|++++++ +++++++++|++.++|+
T Consensus       142 aa~l~~~~~ta~~~l~-~~~~----~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~  215 (348)
T 4eez_A          142 ASSITCAGVTTYKAIK-VSGV----KPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINS  215 (348)
T ss_dssp             HHHHHHHHHHHHHHHH-HHTC----CTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             HhhcccceeeEEeeec-ccCC----CCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeC
Confidence            9999999999999996 6777    9999999999 799999999999976 5699999965 56789999999999999


Q ss_pred             CChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      ++.++.+++.+.   .++|.+++++++......+ +++++  ++|+++.++.+...           .  .+++...   
T Consensus       216 ~~~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~-~~~l~--~~G~~v~~g~~~~~-----------~--~~~~~~~---  276 (348)
T 4eez_A          216 GDVNPVDEIKKITGGLGVQSAIVCAVARIAFEQA-VASLK--PMGKMVAVAVPNTE-----------M--TLSVPTV---  276 (348)
T ss_dssp             -CCCHHHHHHHHTTSSCEEEEEECCSCHHHHHHH-HHTEE--EEEEEEECCCCSCE-----------E--EECHHHH---
T ss_pred             CCCCHHHHhhhhcCCCCceEEEEeccCcchhhee-heeec--CCceEEEEeccCCC-----------C--ccCHHHH---
Confidence            998888887753   4799999999988765554 89999  99999998643111           0  0111111   


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                         ..++..+ .+....+.++++++++++++|++++.+ ++|||+++++||+.+++++..||+||+|
T Consensus       277 ---~~~~~~i-~gs~~~~~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          277 ---VFDGVEV-AGSLVGTRLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             ---HHSCCEE-EECCSCCHHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             ---HhCCeEE-EEEecCCHHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEc
Confidence               1122222 233445688999999999999998765 6899999999999999999999999986

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=8.2e-50  Score=374.06  Aligned_cols=315  Identities=23%  Similarity=0.372  Sum_probs=254.9

Q ss_pred             ccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          24 STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      |++|||+++.+++++  ++++ +.|.|+|++|||||||.++|||++|++++.|..+              .....+|.++
T Consensus         5 ~~~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--------------~~~~~~P~v~   67 (343)
T 3gaz_A            5 TPTMIAAVVEEANGP--FVLR-KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAP--------------HAQQPLPAIL   67 (343)
T ss_dssp             -CEEEEEEECSTTCC--EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCG--------------GGCCCSSBCC
T ss_pred             chhheEEEEecCCCc--eEEE-eccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCC--------------CCCCCCCccc
Confidence            678999999998876  8888 8999999999999999999999999999988521              1124678999


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEeecC--CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQP--HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA  181 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~--~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~  181 (383)
                      |||++|+|+++|+++++|++||||+++...  ..+|+|+||+++|.+.++++|+++++++||+++++++|||+++.+.++
T Consensus        68 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~  147 (343)
T 3gaz_A           68 GMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQ  147 (343)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTC
T ss_pred             CcceEEEEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcC
Confidence            999999999999999999999999987532  136999999999999999999999999999999999999999977888


Q ss_pred             cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEE
Q psy9949         182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVIL  258 (383)
Q Consensus       182 ~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~  258 (383)
                      +    ++|++|||+||+|++|++++|+|+..|++|+++.+.++.++++++|++. ++ +..++.+.+.+   ..++|++|
T Consensus       148 ~----~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vi  221 (343)
T 3gaz_A          148 V----QDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVY  221 (343)
T ss_dssp             C----CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred             C----CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEE
Confidence            8    9999999999999999999999999999999996666788999999988 77 66666666654   35899999


Q ss_pred             EcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEE----E-EEcC
Q psy9949         259 DAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRW----G-FFMP  333 (383)
Q Consensus       259 d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~  333 (383)
                      ||+|++.....  +++++  ++|+++.++....       .    ...  .+...    +..+.+.....    . ....
T Consensus       222 d~~g~~~~~~~--~~~l~--~~G~iv~~g~~~~-------~----~~~--~~~~~----~~~~~g~~~~~~~~~~~~~~~  280 (343)
T 3gaz_A          222 DTLGGPVLDAS--FSAVK--RFGHVVSCLGWGT-------H----KLA--PLSFK----QATYSGVFTLHTLLANEGLAH  280 (343)
T ss_dssp             ESSCTHHHHHH--HHHEE--EEEEEEESCCCSC-------C----CCH--HHHHT----TCEEEECCTTHHHHHTCSHHH
T ss_pred             ECCCcHHHHHH--HHHHh--cCCeEEEEcccCc-------c----ccc--hhhhc----CcEEEEEEeccchhcccchHH
Confidence            99998655555  89999  9999999865320       0    000  11111    11111110000    0 0001


Q ss_pred             CHHHHHHHHHHHHcCCcccccc-eeecCCCHHHHHHHHhcCCC----CCeEEEe
Q psy9949         334 IPYAVKEINKFIERGQIKPVID-SKYNFCELPTAFEKVQQGHL----RGKIILN  382 (383)
Q Consensus       334 ~~~~~~~~~~l~~~g~l~~~~~-~~~~l~~~~~a~~~l~~~~~----~gkvvl~  382 (383)
                      ..++++++++++++|++++.++ ++|||+++++||+.+.+++.    +||+|++
T Consensus       281 ~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~  334 (343)
T 3gaz_A          281 FGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAIT  334 (343)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEE
T ss_pred             HHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEE
Confidence            2478999999999999999888 79999999999999988766    5788875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=9.8e-50  Score=374.47  Aligned_cols=307  Identities=19%  Similarity=0.240  Sum_probs=249.1

Q ss_pred             ccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          24 STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      +++||++++.+++++  ++++ +.|.|+|+++||||||.++|||++|++.+.|.                .....+|.++
T Consensus         2 ~m~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~----------------~~~~~~p~i~   62 (348)
T 3two_A            2 RVQSKGFAIFSKDEH--FKPH-DFSRHAVGPRDVLIDILYAGICHSDIHSAYSE----------------WKEGIYPMIP   62 (348)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTS----------------SSCCCSSBCC
T ss_pred             ceEEEEEEEccCCCC--CeEE-EeeCCCCCCCeEEEEEEEeeecccchhhhcCC----------------CCCCCCCeec
Confidence            468999999987754  7888 89999999999999999999999999999886                2235679999


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEeec------------------------CC----------CCCCceEEEeecCcc
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PH----------KQGSFSKLILADSAL  149 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~----------~~g~~a~~~~v~~~~  149 (383)
                      |||++|+|+++|++|++|++||||++...                        ..          .+|+|+||+++|.+.
T Consensus        63 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~  142 (348)
T 3two_A           63 GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENY  142 (348)
T ss_dssp             CCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGG
T ss_pred             CcceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhh
Confidence            99999999999999999999999976310                        01          129999999999999


Q ss_pred             cccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHH
Q psy9949         150 VHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLV  228 (383)
Q Consensus       150 ~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~  228 (383)
                      ++++|+++++++||+++++++|||+++. ..++    ++|++|||+| +|++|++++|+|+.+|++|++++ ++++.+++
T Consensus       143 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          143 VISVDKNAPLEKVAPLLCAGITTYSPLK-FSKV----TKGTKVGVAG-FGGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             CEECCTTSCHHHHGGGGTHHHHHHHHHH-HTTC----CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             EEECCCCCCHHHhhhhhhhHHHHHHHHH-hcCC----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            9999999999999999999999999997 5577    9999999999 59999999999999999999998 55678999


Q ss_pred             HhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHH
Q psy9949         229 TSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF  308 (383)
Q Consensus       229 ~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~  308 (383)
                      +++|++.++ .+. +   .+.+  ++|+|||++|++.....+ +++++  ++|+++.+|.+..          +... .+
T Consensus       217 ~~lGa~~v~-~~~-~---~~~~--~~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~~----------~~~~-~~  275 (348)
T 3two_A          217 LSMGVKHFY-TDP-K---QCKE--ELDFIISTIPTHYDLKDY-LKLLT--YNGDLALVGLPPV----------EVAP-VL  275 (348)
T ss_dssp             HHTTCSEEE-SSG-G---GCCS--CEEEEEECCCSCCCHHHH-HTTEE--EEEEEEECCCCCG----------GGCC-EE
T ss_pred             HhcCCCeec-CCH-H---HHhc--CCCEEEECCCcHHHHHHH-HHHHh--cCCEEEEECCCCC----------CCcc-cC
Confidence            999999988 332 2   1222  899999999998443433 89999  9999999864310          1000 01


Q ss_pred             HHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         309 DLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.....+     .++..+ .+......++++++++++++|++++.+ ++||++++++||+.+.+++..||+||++
T Consensus       276 ~~~~~~~-----~~~~~i-~g~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          276 SVFDFIH-----LGNRKV-YGSLIGGIKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             EHHHHHH-----TCSCEE-EECCSCCHHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             CHHHHHh-----hCCeEE-EEEecCCHHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEec
Confidence            1111100     222222 233445678999999999999998865 7999999999999999999999999974

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=3.7e-50  Score=378.51  Aligned_cols=324  Identities=20%  Similarity=0.187  Sum_probs=255.0

Q ss_pred             CCCcccceeeEEEeecCCCc-eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949          20 HLKYSTRTAAWQISSYGGAD-ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE   98 (383)
Q Consensus        20 ~~~~~~~~~a~~~~~~g~~~-~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~   98 (383)
                      .+.+|.+||++++.++|++. .++++ +.|.|+|+++||||||.++|||++|++.+.|..+               ....
T Consensus        20 ~~~m~~~mka~~~~~~g~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---------------~~~~   83 (357)
T 1zsy_A           20 FQSMPARVRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG---------------LLPE   83 (357)
T ss_dssp             CCCCCCCEEEEEESSSSCHHHHEEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSS---------------CCCC
T ss_pred             hhhCchhhEEEEEecCCCccceEEEe-eccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCC---------------CCCC
Confidence            34568889999999988763 37888 8999999999999999999999999999988511               1235


Q ss_pred             CCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH
Q psy9949          99 FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI  178 (383)
Q Consensus        99 ~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~  178 (383)
                      +|.++|||++|+|+++|+++++|++||||++...  .+|+|+||+++|++.++++|+++++++||+++++++|||+++.+
T Consensus        84 ~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~  161 (357)
T 1zsy_A           84 LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANA--GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMD  161 (357)
T ss_dssp             SSEECCSCCEEEEEEECTTCCSCCTTCEEEESSS--CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHH
T ss_pred             CCccccceEEEEEEEeCCCCCCCCCCCEEEEcCC--CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHH
Confidence            7899999999999999999999999999998742  25999999999999999999999999999999999999999987


Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c----hHHHHHhcCCCeeeeCCChHHHHHHhc---
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D----AKDLVTSLNPNLVIDYNEPEAMHSIAG---  250 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~----~~~~~~~lg~~~v~~~~~~~~~~~i~~---  250 (383)
                      .+++    ++|++|||+|++|++|++++|+||.+|++++++++. +    +.++++++|++.++++++.. .+.+.+   
T Consensus       162 ~~~~----~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~  236 (357)
T 1zsy_A          162 FEQL----QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR-RPEMKNFFK  236 (357)
T ss_dssp             SSCC----CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH-SGGGGGTTS
T ss_pred             Hhcc----CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch-HHHHHHHHh
Confidence            7888    999999999988999999999999999998888843 2    34688899999999875321 123332   


Q ss_pred             C-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEE
Q psy9949         251 A-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWG  329 (383)
Q Consensus       251 ~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (383)
                      . +++|+||||+|++.....  +++++  ++|+++.+|......   ..+    ..  ..+..    ++..+.+......
T Consensus       237 ~~~~~Dvvid~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~---~~~----~~--~~~~~----~~~~i~g~~~~~~  299 (357)
T 1zsy_A          237 DMPQPRLALNCVGGKSSTEL--LRQLA--RGGTMVTYGGMAKQP---VVA----SV--SLLIF----KDLKLRGFWLSQW  299 (357)
T ss_dssp             SSCCCSEEEESSCHHHHHHH--HTTSC--TTCEEEECCCCTTCC---BCC----CH--HHHHH----SCCEEEECCHHHH
T ss_pred             CCCCceEEEECCCcHHHHHH--HHhhC--CCCEEEEEecCCCCC---CCC----CH--HHHHh----cCceEEEEEcchh
Confidence            2 269999999998776554  89999  999999986421000   000    00  01111    1222222110000


Q ss_pred             ----EEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         330 ----FFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       330 ----~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                          ......+.++++++++++|++++.+.++|||+++++||+.+.+++..||+||++
T Consensus       300 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          300 KKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             cccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence                000013568999999999999988878999999999999999888889999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-49  Score=375.27  Aligned_cols=312  Identities=21%  Similarity=0.284  Sum_probs=249.3

Q ss_pred             cccceeeEEEeecCCCceeEeeccccCCC-CCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          23 YSTRTAAWQISSYGGADELQFNDNVKTPI-LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~~~~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      .|++|||+++.+++++  ++++ +.|.|+ |+++||||||.++|||++|++++.|..+..             ....+|.
T Consensus        12 ~~~~mka~~~~~~g~~--l~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------------~~~~~p~   75 (359)
T 1h2b_A           12 GVERLKAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHEL-------------LQPKLPY   75 (359)
T ss_dssp             -----CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHH-------------HCCCSSE
T ss_pred             ChhhceEEEEecCCCC--cEEE-EccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccc-------------cCCCCCe
Confidence            3678999999988754  7888 899999 999999999999999999999998851100             0135789


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeecCcccccCCCCC
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILADSALVHKKPSNI  157 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~~~~~~~ip~~~  157 (383)
                      ++|||++|+|+++|++|++|++||||+++...                        ..+|+|+||+++|++.++++|+++
T Consensus        76 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~  155 (359)
T 1h2b_A           76 TLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDI  155 (359)
T ss_dssp             ECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTC
T ss_pred             ecCcCceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCC
Confidence            99999999999999999999999999775311                        136999999999999999999999


Q ss_pred             CHHHHH---hhhHHHHHHHHHHHHh-hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chHHHHHhc
Q psy9949         158 SDEEAA---GVLYTGLTAWSALQIT-AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAKDLVTSL  231 (383)
Q Consensus       158 ~~~~aa---~l~~~~~tA~~~l~~~-~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~~~~~~l  231 (383)
                      ++++||   +++++++|||+++... +++    +++++|||+|+ |++|++++|+|+.+ |++|++++++ ++.++++++
T Consensus       156 ~~~~aa~~~~l~~~~~ta~~al~~~~~~~----~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l  230 (359)
T 1h2b_A          156 SREKLVEMAPLADAGITAYRAVKKAARTL----YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL  230 (359)
T ss_dssp             CHHHHHHTGGGGTHHHHHHHHHHHHHTTC----CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT
T ss_pred             CHHHHhhccchhhhHHHHHHHHHhhccCC----CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence            999999   7889999999999865 788    99999999996 99999999999999 9999999955 577899999


Q ss_pred             CCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCc--ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhh
Q psy9949         232 NPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPL--DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKN  306 (383)
Q Consensus       232 g~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~--~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~  306 (383)
                      |+++++|+++. +.+.+++.   .++|++||++|++.  ....+ +++    ++|+++.+|.+...     .+    .  
T Consensus       231 Ga~~vi~~~~~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~-~~~----~~G~~v~~g~~~~~-----~~----~--  293 (359)
T 1h2b_A          231 GADHVVDARRD-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPY-LLG----RMGRLIIVGYGGEL-----RF----P--  293 (359)
T ss_dssp             TCSEEEETTSC-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGG-GEE----EEEEEEECCCSSCC-----CC----C--
T ss_pred             CCCEEEeccch-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHH-hhc----CCCEEEEEeCCCCC-----CC----C--
Confidence            99999999877 66666543   37999999999874  33332 444    68999998643100     00    0  


Q ss_pred             HHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         307 AFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ...+..    ++..+.      +......++++++++++++|++++.+ ++|||+++++||+.+.+++..||+||++
T Consensus       294 ~~~~~~----~~~~i~------g~~~~~~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          294 TIRVIS----SEVSFE------GSLVGNYVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHH----TTCEEE------ECCSCCHHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHh----CCcEEE------EecCCCHHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            001111    122222      22234578999999999999999888 9999999999999999998889999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.1e-49  Score=374.99  Aligned_cols=331  Identities=22%  Similarity=0.264  Sum_probs=254.1

Q ss_pred             cCCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949          19 NHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE   98 (383)
Q Consensus        19 ~~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~   98 (383)
                      ++|++|.+|||+++.+++.   ++++++.|.|+|++|||||||.++|||++|++++.|.                   ..
T Consensus         4 ~tm~~p~~mkA~v~~~~~~---l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-------------------~~   61 (371)
T 3gqv_A            4 QPFIPPPQQTALTVNDHDE---VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF-------------------AT   61 (371)
T ss_dssp             CCCCCCSCEEEEEECTTSC---EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC------------------------CC
T ss_pred             CCCCCchhceeEEEcCCCc---eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC-------------------CC
Confidence            4577899999999998754   6776468999999999999999999999999888664                   24


Q ss_pred             CCccccCceeEEEEecCCCCCCCCCCCEEEEeecC-----CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHH
Q psy9949          99 FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP-----HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAW  173 (383)
Q Consensus        99 ~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~-----~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~  173 (383)
                      +|.++|||++|+|+++|++|++|++||||++.+..     ..+|+|+||+++|.+.++++|+++++++||.++++++|||
T Consensus        62 ~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~  141 (371)
T 3gqv_A           62 PWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAG  141 (371)
T ss_dssp             TTSCCCSEEEEEEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHH
T ss_pred             CCccCccccEEEEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHH
Confidence            58999999999999999999999999999998742     2469999999999999999999999999999999999999


Q ss_pred             HHHHHh-hhcCc----cC---CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHH
Q psy9949         174 SALQIT-AALGL----VY---PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAM  245 (383)
Q Consensus       174 ~~l~~~-~~~~~----~~---~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~  245 (383)
                      +++.+. .++..    ..   ++|++|||+|++|++|++++|+|+.+|++|+++++++++++++++|+++++|+++.++.
T Consensus       142 ~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~  221 (371)
T 3gqv_A          142 LAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLA  221 (371)
T ss_dssp             HHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHH
T ss_pred             HHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHH
Confidence            999766 44210    11   57899999998899999999999999999999998788899999999999999999988


Q ss_pred             HHHhcC--CCccEEEEcCCCCccccccccccc-ccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccC
Q psy9949         246 HSIAGA--GPYDVILDAAGIPLDQINSYLPFL-KTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCK  322 (383)
Q Consensus       246 ~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l-~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (383)
                      +.+++.  +++|++|||+|++.....+ ++++ +  ++|+++.+|..............     .+.+....+.+++.+.
T Consensus       222 ~~v~~~t~g~~d~v~d~~g~~~~~~~~-~~~l~~--~~G~iv~~g~~~~~~~~~~~~~~-----~~~~~~~~~~k~~~~~  293 (371)
T 3gqv_A          222 QTIRTYTKNNLRYALDCITNVESTTFC-FAAIGR--AGGHYVSLNPFPEHAATRKMVTT-----DWTLGPTIFGEGSTWP  293 (371)
T ss_dssp             HHHHHHTTTCCCEEEESSCSHHHHHHH-HHHSCT--TCEEEEESSCCCC---CCSCEEE-----EECCGGGGGTSCBSCS
T ss_pred             HHHHHHccCCccEEEECCCchHHHHHH-HHHhhc--CCCEEEEEecCccccccccccce-----eeeeeeeecccccccc
Confidence            888764  4699999999996654443 7788 7  89999999743211000000000     0000011112244444


Q ss_pred             CccEEEEEEcC-----CHHHHHHHHHHHHcCCcccc--cceeecCCCHHHHHHHHhcCCCCCeEEE
Q psy9949         323 TNTIRWGFFMP-----IPYAVKEINKFIERGQIKPV--IDSKYNFCELPTAFEKVQQGHLRGKIIL  381 (383)
Q Consensus       323 ~~~~~~~~~~~-----~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~a~~~l~~~~~~gkvvl  381 (383)
                      |....  ...+     ..+.++++++++++|++++.  +++.|+|+++++||+.+.+++..||.|+
T Consensus       294 g~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvv  357 (371)
T 3gqv_A          294 APYGR--PGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLV  357 (371)
T ss_dssp             TTTCB--CCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEE
T ss_pred             ccccc--cccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEE
Confidence            43210  0000     12345688999999999774  4566999999999999999999885443

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=8.1e-50  Score=375.68  Aligned_cols=322  Identities=20%  Similarity=0.223  Sum_probs=256.3

Q ss_pred             ccCCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949          18 INHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL   97 (383)
Q Consensus        18 ~~~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~   97 (383)
                      +....+|.+||++++.++|.++.++++ +.+.|+|+++||||||.++|||++|+++..|..+               ...
T Consensus        14 ~~~~~~~~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---------------~~~   77 (354)
T 2j8z_A           14 GTENLYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYD---------------PPP   77 (354)
T ss_dssp             -------CEEEEEEESSCSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---------------CCT
T ss_pred             cccccchhheeEEEEccCCCccceEEe-ecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCC---------------CCC
Confidence            445667889999999999988889998 8999999999999999999999999999888521               123


Q ss_pred             CCCccccCceeEEEEecCCCC-CCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHH
Q psy9949          98 EFPLTLGRDFCGKIVAKGPRV-TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSAL  176 (383)
Q Consensus        98 ~~p~~~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l  176 (383)
                      .+|.++|||++|+|+++|++| ++|++||||+++..   +|+|+||+++|++.++++|+++++++||+++++++|||+++
T Consensus        78 ~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~~---~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al  154 (354)
T 2j8z_A           78 GASNILGLEASGHVAELGPGCQGHWKIGDTAMALLP---GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLL  154 (354)
T ss_dssp             TSCSSSCSEEEEEEEEECSCC--CCCTTCEEEEECS---SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHH
T ss_pred             CCCcccceeeEEEEEEECCCcCCCCCCCCEEEEecC---CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHH
Confidence            578999999999999999999 99999999999863   59999999999999999999999999999999999999999


Q ss_pred             HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---C
Q psy9949         177 QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---G  252 (383)
Q Consensus       177 ~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~  252 (383)
                      .+.+++    +++++|+|+||+|++|++++|+++..|++|++++++ ++.+.++++|++.++++++.++.+.+.+.   .
T Consensus       155 ~~~~~~----~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  230 (354)
T 2j8z_A          155 HLVGNV----QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGA  230 (354)
T ss_dssp             TTTSCC----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTS
T ss_pred             HHhcCC----CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCC
Confidence            777888    999999999999999999999999999999999955 56678889999999999887777777643   4


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM  332 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (383)
                      ++|++|||+|++.....  +++++  ++|+++.+|......   ..+..     ...+...    +..+.+..     ..
T Consensus       231 ~~d~vi~~~G~~~~~~~--~~~l~--~~G~iv~~G~~~~~~---~~~~~-----~~~~~~~----~~~i~g~~-----~~  289 (354)
T 2j8z_A          231 GVNLILDCIGGSYWEKN--VNCLA--LDGRWVLYGLMGGGD---INGPL-----FSKLLFK----RGSLITSL-----LR  289 (354)
T ss_dssp             CEEEEEESSCGGGHHHH--HHHEE--EEEEEEECCCTTCSC---CCSCH-----HHHHHHT----TCEEEECC-----ST
T ss_pred             CceEEEECCCchHHHHH--HHhcc--CCCEEEEEeccCCCc---cCCCh-----hHHHHhC----CCEEEEEE-----cc
Confidence            79999999998755444  89999  999999986431100   00000     0111111    22222211     01


Q ss_pred             C-C--------HHHHHHHHHHHHcC---CcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         333 P-I--------PYAVKEINKFIERG---QIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       333 ~-~--------~~~~~~~~~l~~~g---~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      . .        .+..+++++++++|   +++++++++|||+++++||+.+.+++..||+||++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          290 SRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             TCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             cccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEec
Confidence            1 1        11235688899999   89999999999999999999999888889999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-49  Score=374.19  Aligned_cols=316  Identities=24%  Similarity=0.341  Sum_probs=256.1

Q ss_pred             cccceeeEEEeecCCCceeEe-eccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          23 YSTRTAAWQISSYGGADELQF-NDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~-~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      .|.+|||+++.+++.++.+++ + +.|.|+|+++||+|||.++|||++|+++..|..+               ....+|.
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---------------~~~~~P~   89 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRS-DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS---------------RKPLLPY   89 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSS---------------CCCCSSB
T ss_pred             CcceEEEEEEccCCCcceeEEee-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCC
Confidence            366799999999888888898 7 8999999999999999999999999999887511               1245789


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA  181 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~  181 (383)
                      ++|||++|+|+++|+++++|++||||++...  .+|+|+||+++|++.++++|+++++++||+++++++|||+++.+.++
T Consensus        90 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~  167 (351)
T 1yb5_A           90 TPGSDVAGVIEAVGDNASAFKKGDRVFTSST--ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAC  167 (351)
T ss_dssp             CCCSCEEEEEEEECTTCTTCCTTCEEEESCC--SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSC
T ss_pred             cCCceeEEEEEEECCCCCCCCCCCEEEEeCC--CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhC
Confidence            9999999999999999999999999988752  35999999999999999999999999999999999999999987788


Q ss_pred             cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEE
Q psy9949         182 LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVI  257 (383)
Q Consensus       182 ~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v  257 (383)
                      +    +++++|+|+|++|++|++++|+|+..|++|++++++ ++.+.++++|++.++++++.++.+.+.+.   .++|++
T Consensus       168 ~----~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~v  243 (351)
T 1yb5_A          168 V----KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDII  243 (351)
T ss_dssp             C----CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred             C----CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEE
Confidence            8    999999999988999999999999999999999965 56678899999999999887777776542   479999


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCC---
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPI---  334 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  334 (383)
                      |||+|+......  +++++  ++|+++.+|...       ..  .....  .+..    ++..+.+...    ....   
T Consensus       244 i~~~G~~~~~~~--~~~l~--~~G~iv~~g~~~-------~~--~~~~~--~~~~----~~~~i~g~~~----~~~~~~~  300 (351)
T 1yb5_A          244 IEMLANVNLSKD--LSLLS--HGGRVIVVGSRG-------TI--EINPR--DTMA----KESSIIGVTL----FSSTKEE  300 (351)
T ss_dssp             EESCHHHHHHHH--HHHEE--EEEEEEECCCCS-------CE--EECTH--HHHT----TTCEEEECCG----GGCCHHH
T ss_pred             EECCChHHHHHH--HHhcc--CCCEEEEEecCC-------CC--ccCHH--HHHh----CCcEEEEEEe----ecCCHHH
Confidence            999998655444  89999  999999986421       00  00000  1111    1222222110    0112   


Q ss_pred             -HHHHHHHHHHHHcCCcccccceeecCCCHHHHHHH-HhcCCCCCeEEEeC
Q psy9949         335 -PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEK-VQQGHLRGKIILNA  383 (383)
Q Consensus       335 -~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~-l~~~~~~gkvvl~~  383 (383)
                       .+.++.+.+++++|+++++++++|||+++++|++. +.+++..||+||++
T Consensus       301 ~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          301 FQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence             33455667788899999999999999999999998 66667789999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=8.4e-51  Score=381.89  Aligned_cols=325  Identities=15%  Similarity=0.152  Sum_probs=256.1

Q ss_pred             CCcccceeeEEEe--ec-CCCceeEeeccc---------cCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcc
Q psy9949          21 LKYSTRTAAWQIS--SY-GGADELQFNDNV---------KTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL   88 (383)
Q Consensus        21 ~~~~~~~~a~~~~--~~-g~~~~l~~~~~~---------~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~   88 (383)
                      |++|.+|||+++.  ++ +.++.++++ +.         |.|+|+++||||||.++|||++|++.+.|..+         
T Consensus         5 m~~p~~mka~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---------   74 (349)
T 3pi7_A            5 MTIPSEMKALLLVGDGYTKTPSGSALE-AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYG---------   74 (349)
T ss_dssp             CCCCSEEEEEEECSCBSCSSCCCSCCC-CSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSS---------
T ss_pred             CCCchhheEEEEEccccCCCcccceEE-EeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCC---------
Confidence            6678999999999  55 346678888 78         99999999999999999999999999988621         


Q ss_pred             cccCCCCCCCCCccccCceeEEEEecCCCC-CCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhH
Q psy9949          89 ETCSVEPVLEFPLTLGRDFCGKIVAKGPRV-TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLY  167 (383)
Q Consensus        89 ~~~~~~~~~~~p~~~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~  167 (383)
                            ....+|.++|||++|+|+++|++| ++|++||||++..+...+|+|+||+++|.+.++++|+++++++||++++
T Consensus        75 ------~~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  148 (349)
T 3pi7_A           75 ------QPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIV  148 (349)
T ss_dssp             ------SCBCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSH
T ss_pred             ------CCCCCCCCccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccc
Confidence                  234679999999999999999999 9999999999987666679999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHH
Q psy9949         168 TGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMH  246 (383)
Q Consensus       168 ~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~  246 (383)
                      .++|||+++. .++.    ..+++|+|+||+|++|++++|+|+.+|++|+++++ .++.++++++|++.++|+++.++.+
T Consensus       149 ~~~ta~~~~~-~~~~----~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~  223 (349)
T 3pi7_A          149 NPLTAIAMFD-IVKQ----EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEA  223 (349)
T ss_dssp             HHHHHHHHHH-HHHH----HCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHH
T ss_pred             cHHHHHHHHH-HHhh----CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHH
Confidence            9999997765 4444    45589999999999999999999999999999995 5678899999999999999888888


Q ss_pred             HHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCC
Q psy9949         247 SIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKT  323 (383)
Q Consensus       247 ~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (383)
                      .+.+.   .++|++|||+|++.....  +++++  ++|+++.+|......   ..+.    . ...+..    ++..+.+
T Consensus       224 ~v~~~~~~~g~D~vid~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~---~~~~----~-~~~~~~----~~~~i~g  287 (349)
T 3pi7_A          224 TLREVMKAEQPRIFLDAVTGPLASAI--FNAMP--KRARWIIYGRLDPDA---TVIR----E-PGQLIF----QHKHIEG  287 (349)
T ss_dssp             HHHHHHHHHCCCEEEESSCHHHHHHH--HHHSC--TTCEEEECCCSCCSC---CCCS----C-THHHHH----SCCEEEE
T ss_pred             HHHHHhcCCCCcEEEECCCChhHHHH--Hhhhc--CCCEEEEEeccCCCC---CCCC----c-hhhhhc----cccEEEE
Confidence            87754   489999999998876554  89999  999999996432111   0000    0 001111    1222222


Q ss_pred             ccEEEEEE---cCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         324 NTIRWGFF---MPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       324 ~~~~~~~~---~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ........   ....+.++++++++++|+++++++++|+|+++++||+.+. ++..||+||+.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          288 FWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             CCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             EEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            11000000   0014678899999999999999999999999999999554 55679999974

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=4.3e-49  Score=369.77  Aligned_cols=309  Identities=17%  Similarity=0.230  Sum_probs=254.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++++++++  ++++ +.|.|+|++|||||||.++|||++|++.+.|..+              .....+|.++|||
T Consensus         1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--------------~~~~~~p~i~G~e   63 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAA--------------QYAYGLPLTLGHE   63 (345)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT--------------TCCSCSSEECCSE
T ss_pred             CeEEEEcCCCCc--eEEE-EecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC--------------ccCCCCCcccCcc
Confidence            899999998876  7888 8999999999999999999999999999988621              1225679999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee-----------------------------cCCCCCCceEEEeec-CcccccCCCC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI-----------------------------QPHKQGSFSKLILAD-SALVHKKPSN  156 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~-----------------------------~~~~~g~~a~~~~v~-~~~~~~ip~~  156 (383)
                      ++|+|+++|+++++|++||||++..                             +...+|+|+||+++| .+.++++|+ 
T Consensus        64 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-  142 (345)
T 3jv7_A           64 GVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-  142 (345)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-
T ss_pred             cEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-
Confidence            9999999999999999999998852                             122469999999999 999999999 


Q ss_pred             CCHHHHHhhhHHHHHHHHHHHH-hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chHHHHHhcCC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQI-TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAKDLVTSLNP  233 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~-~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~~~~~~lg~  233 (383)
                      +++++||+++++++|||+++.+ ..++    +++++|+|+| +|++|++++|+|+.+ |++|++++++ ++.++++++|+
T Consensus       143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~----~~g~~vlv~G-aG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa  217 (345)
T 3jv7_A          143 LDPVAAAPLTDAGLTPYHAISRVLPLL----GPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA  217 (345)
T ss_dssp             CCHHHHGGGGTTTHHHHHHHHTTGGGC----CTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence            9999999999999999999986 4577    9999999999 599999999999998 5699999854 57789999999


Q ss_pred             CeeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949         234 NLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL  310 (383)
Q Consensus       234 ~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (383)
                      +.++++++ ++.+.+++.   .++|++||++|++.....+ +++++  ++|+++.+|.....          ..  .+++
T Consensus       218 ~~~i~~~~-~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~-~~~l~--~~G~iv~~G~~~~~----------~~--~~~~  281 (345)
T 3jv7_A          218 DAAVKSGA-GAADAIRELTGGQGATAVFDFVGAQSTIDTA-QQVVA--VDGHISVVGIHAGA----------HA--KVGF  281 (345)
T ss_dssp             SEEEECST-THHHHHHHHHGGGCEEEEEESSCCHHHHHHH-HHHEE--EEEEEEECSCCTTC----------CE--EEST
T ss_pred             CEEEcCCC-cHHHHHHHHhCCCCCeEEEECCCCHHHHHHH-HHHHh--cCCEEEEECCCCCC----------CC--CcCH
Confidence            99999876 667766653   4899999999998544443 89999  99999998643110          00  0111


Q ss_pred             hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                             ....++..+ .+......++++++++++++|++++ ++++|+++++++||+.+.+++..||+||++
T Consensus       282 -------~~~~~~~~i-~g~~~~~~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          282 -------FMIPFGASV-VTPYWGTRSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             -------TTSCTTCEE-ECCCSCCHHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             -------HHHhCCCEE-EEEecCCHHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence                   112222222 1233345789999999999999988 458999999999999999999999999974

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=7e-49  Score=367.96  Aligned_cols=314  Identities=24%  Similarity=0.313  Sum_probs=258.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++.++.++++ +.+.|+|+++||||||.++|||++|+++..|..+               ....+|.++|||
T Consensus         1 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~v~G~E   64 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS---------------PKLPLPHVLGAD   64 (343)
T ss_dssp             CEEEEECSSSSGGGEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSS---------------TTCCSSEECCSE
T ss_pred             CeEEEEecCCCCceEEEE-ecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCC---------------CCCCCCcccccc
Confidence            799999999887778898 8999999999999999999999999999988511               113578999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEe----ec--------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGV----IQ--------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~----~~--------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|+++++|++||||+..    |+                    ...+|+|+||+++|.+.++++|+++++++|
T Consensus        65 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~a  144 (343)
T 2eih_A           65 GSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEA  144 (343)
T ss_dssp             EEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             eEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHH
Confidence            999999999999999999999831    11                    223699999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      |+++.++.|||+++.+.+++    +++++|||+|++|++|++++|+++..|++|++++++ ++.+.++++|++.++|+++
T Consensus       145 a~l~~~~~ta~~al~~~~~~----~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~  220 (343)
T 2eih_A          145 AAIPLTFLTAWQMVVDKLGV----RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTH  220 (343)
T ss_dssp             HHSHHHHHHHHHHHTTTSCC----CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTS
T ss_pred             hhchhhHHHHHHHHHHhcCC----CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCc
Confidence            99999999999999866788    999999999988999999999999999999999965 5668888899999999888


Q ss_pred             hHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         242 PEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       242 ~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      .++.+.+.+.   .++|++||++|.......  +++++  ++|+++.++......   ..+..      ..+..    ++
T Consensus       221 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~---~~~~~------~~~~~----~~  283 (343)
T 2eih_A          221 PDWPKEVRRLTGGKGADKVVDHTGALYFEGV--IKATA--NGGRIAIAGASSGYE---GTLPF------AHVFY----RQ  283 (343)
T ss_dssp             TTHHHHHHHHTTTTCEEEEEESSCSSSHHHH--HHHEE--EEEEEEESSCCCSCC---CCCCT------THHHH----TT
T ss_pred             ccHHHHHHHHhCCCCceEEEECCCHHHHHHH--HHhhc--cCCEEEEEecCCCCc---CccCH------HHHHh----CC
Confidence            7777766542   479999999995444444  89999  999999986532110   00000      01111    12


Q ss_pred             cccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         319 ELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..+.      +......++++++++++++|++++.++++|||+++++||+.+.+++..||+||++
T Consensus       284 ~~~~------g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          284 LSIL------GSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CEEE------ECCSCCGGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             cEEE------EecCccHHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            2222      2223357789999999999999999999999999999999999988889999974

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=6.2e-49  Score=372.85  Aligned_cols=313  Identities=17%  Similarity=0.178  Sum_probs=252.5

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      ...|++||++++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|.                 +...+|
T Consensus         3 ~~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-----------------~~~~~P   62 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK-----------------KKALFP   62 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-----------------SCCCSS
T ss_pred             CCCChheeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-----------------CCCCCC
Confidence            345789999999988754  7788 89999999999999999999999999988774                 113578


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEeec-------------------------------C----------------
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------------P----------------  133 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------------~----------------  133 (383)
                      .++|||++|+|+++|++|++|++||||++...                               .                
T Consensus        63 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~  142 (376)
T 1e3i_A           63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIY  142 (376)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEB
T ss_pred             cccCccccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccc
Confidence            99999999999999999999999999987521                               0                


Q ss_pred             --CCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHH
Q psy9949         134 --HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKA  211 (383)
Q Consensus       134 --~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~  211 (383)
                        ...|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++    ++|++|||+| +|++|++++|+|+.
T Consensus       143 ~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~VlV~G-aG~vG~~aiqlak~  217 (376)
T 1e3i_A          143 HFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKV----TPGSTCAVFG-LGCVGLSAIIGCKI  217 (376)
T ss_dssp             CCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCC----CTTCEEEEEC-CSHHHHHHHHHHHH
T ss_pred             cccCCccceeEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCC----CCCCEEEEEC-CCHHHHHHHHHHHH
Confidence              0138999999999999999999999999999999999999999877888    9999999999 69999999999999


Q ss_pred             CCC-EEEEEe-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEE
Q psy9949         212 WDI-EVVTTC-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFV  284 (383)
Q Consensus       212 ~G~-~Vi~~~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v  284 (383)
                      +|+ +|++++ +++++++++++|+++++++++  .++.+.+.+.  +++|+|||++|+......+ +++++  ++ |+++
T Consensus       218 ~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~-~~~l~--~~~G~iv  294 (376)
T 1e3i_A          218 AGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAA-VDCTV--LGWGSCT  294 (376)
T ss_dssp             TTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHH-HHTBC--TTTCEEE
T ss_pred             cCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHH-HHHhh--cCCCEEE
Confidence            999 899998 456788999999999998874  4566666542  4899999999986544443 89999  99 9999


Q ss_pred             EecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc---CCHHHHHHHHHHHHcCCcc--cccceeec
Q psy9949         285 TLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM---PIPYAVKEINKFIERGQIK--PVIDSKYN  359 (383)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~g~l~--~~~~~~~~  359 (383)
                      .+|...           ..    ..+....+    ..+. .+. +...   ...++++++++++++|+++  ++++++||
T Consensus       295 ~~G~~~-----------~~----~~~~~~~~----~~~~-~i~-g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~  353 (376)
T 1e3i_A          295 VVGAKV-----------DE----MTIPTVDV----ILGR-SIN-GTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALP  353 (376)
T ss_dssp             ECCCSS-----------SE----EEEEHHHH----HTTC-EEE-ECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEE
T ss_pred             EECCCC-----------Cc----cccCHHHh----hccC-eEE-EEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeec
Confidence            986410           00    00000011    1111 111 1111   1357899999999999986  47789999


Q ss_pred             CCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         360 FCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       360 l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      |+++++||+.+.+++. +|+||++
T Consensus       354 l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          354 FESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             GGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             HHHHHHHHHHHhcCCc-ceEEEeC
Confidence            9999999999988774 7999975

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.7e-49  Score=370.44  Aligned_cols=312  Identities=18%  Similarity=0.213  Sum_probs=252.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHH-HhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVA-MLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      |||+++.++++   ++++ +.|.|+|+++||||||.++|||++|++ +..|.                 ....+|.++||
T Consensus         1 MkA~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~-----------------~~~~~p~v~G~   59 (352)
T 3fpc_A            1 MKGFAMLSIGK---VGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGA-----------------IGERHNMILGH   59 (352)
T ss_dssp             CEEEEEEETTE---EEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCT-----------------TCCCSSEECCC
T ss_pred             CeEEEEccCCC---ceEE-eCCCCCCCCCeEEEEeCEEeEcccchHHHhCCC-----------------CCCCCCcccCC
Confidence            89999999875   5788 899999999999999999999999999 55775                 12457899999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEee---------------------------cCCCCCCceEEEeecCc--ccccCCCC
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVI---------------------------QPHKQGSFSKLILADSA--LVHKKPSN  156 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~---------------------------~~~~~g~~a~~~~v~~~--~~~~ip~~  156 (383)
                      |++|+|+++|+++++|++||||++..                           ....+|+|+||+++|.+  .++++|++
T Consensus        60 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~  139 (352)
T 3fpc_A           60 EAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKE  139 (352)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTT
T ss_pred             cceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCC
Confidence            99999999999999999999998631                           11246999999999976  99999999


Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      +++++||.++.++.|||+++. .+++    ++|++|||+| +|++|++++|+|+.+|+ +|++++++ ++.++++++|++
T Consensus       140 ~~~~~aa~~~~~~~ta~~al~-~~~~----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~  213 (352)
T 3fpc_A          140 IPLEAAVMIPDMMTTGFHGAE-LANI----KLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT  213 (352)
T ss_dssp             SCHHHHTTTTTHHHHHHHHHH-HTTC----CTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC
T ss_pred             CCHHHHhhccchhHHHHHHHH-hcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc
Confidence            999999999999999999994 7888    9999999998 69999999999999999 89999865 467899999999


Q ss_pred             eeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHh
Q psy9949         235 LVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL  311 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (383)
                      +++++++.++.+.+++.   .++|+|||++|++.....+ +++++  ++|+++.+|......             .+++.
T Consensus       214 ~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~-~~~l~--~~G~~v~~G~~~~~~-------------~~~~~  277 (352)
T 3fpc_A          214 DIINYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQA-VKMIK--PGSDIGNVNYLGEGD-------------NIDIP  277 (352)
T ss_dssp             EEECGGGSCHHHHHHHHTTTCCEEEEEECSSCTTHHHHH-HHHEE--EEEEEEECCCCCSCS-------------EEEEE
T ss_pred             eEEcCCCcCHHHHHHHHcCCCCCCEEEECCCChHHHHHH-HHHHh--cCCEEEEecccCCCC-------------ceecc
Confidence            99999888888887653   3799999999996544443 89999  999999986432100             00111


Q ss_pred             hhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeec-CCCHHHHHHHHhcCCCC-CeEEEeC
Q psy9949         312 KSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYN-FCELPTAFEKVQQGHLR-GKIILNA  383 (383)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~-l~~~~~a~~~l~~~~~~-gkvvl~~  383 (383)
                      ...+  ....+...+.........++++++++++++|++++  +++++|+ |+++++||+.+.+++.. +|+||++
T Consensus       278 ~~~~--~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          278 RSEW--GVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             TTTT--GGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             hhHh--hhhccccEEEEeeccCchhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            1111  11112222221111123678999999999999876  5789999 99999999999886654 8999985

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.8e-49  Score=373.85  Aligned_cols=315  Identities=21%  Similarity=0.310  Sum_probs=252.1

Q ss_pred             ccCCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949          18 INHLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL   97 (383)
Q Consensus        18 ~~~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~   97 (383)
                      +....+|++|||+++.+++   .++++ +.|.|+|++|||||||.++|||++|++++.|.                 ...
T Consensus        15 ~~~~~~p~~mkA~v~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~-----------------~~~   73 (370)
T 4ej6_A           15 TENLYFQSMMKAVRLESVG---NISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGE-----------------FPS   73 (370)
T ss_dssp             ------CCEEEEEEEEETT---EEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTS-----------------SCC
T ss_pred             ccccccchheEEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEEeecHHHHHHHcCC-----------------CCC
Confidence            3445578899999999875   47888 89999999999999999999999999999886                 135


Q ss_pred             CCCccccCceeEEEEecCCCCCCCCCCCEEEEee------------------------cCCCCCCceEEEeecCcccccC
Q psy9949          98 EFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI------------------------QPHKQGSFSKLILADSALVHKK  153 (383)
Q Consensus        98 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~~~~~g~~a~~~~v~~~~~~~i  153 (383)
                      .+|.++|||++|+|+++|+++++|++||||++..                        +...+|+|+||+++|.+.++++
T Consensus        74 ~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~  153 (370)
T 4ej6_A           74 TPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEI  153 (370)
T ss_dssp             CSSEECCCSEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEE
T ss_pred             CCCeecCcceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEEC
Confidence            6789999999999999999999999999998732                        2234699999999999999999


Q ss_pred             CCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhc
Q psy9949         154 PSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSL  231 (383)
Q Consensus       154 p~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~l  231 (383)
                      |+++++++|| ++.++.|||+++ +.+++    ++|++|||+|+ |++|++++|+|+.+|+ +|++++++ ++.++++++
T Consensus       154 P~~~~~~~aa-l~~~~~ta~~~l-~~~~~----~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l  226 (370)
T 4ej6_A          154 PLTLDPVHGA-FCEPLACCLHGV-DLSGI----KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV  226 (370)
T ss_dssp             CTTSCTTGGG-GHHHHHHHHHHH-HHHTC----CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCHHHHh-hhhHHHHHHHHH-HhcCC----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence            9999999998 667889999999 58888    99999999995 9999999999999999 89998855 567899999


Q ss_pred             CCCeeeeCCChHHHHHHhc---C--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhh
Q psy9949         232 NPNLVIDYNEPEAMHSIAG---A--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKN  306 (383)
Q Consensus       232 g~~~v~~~~~~~~~~~i~~---~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~  306 (383)
                      |++.++|+++.++.+.+.+   .  +++|+|||++|+......+ +++++  ++|+++.+|.......  ..+      .
T Consensus       227 Ga~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~-~~~l~--~~G~vv~~G~~~~~~~--~~~------~  295 (370)
T 4ej6_A          227 GATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQS-TRLAK--AGGTVVILGVLPQGEK--VEI------E  295 (370)
T ss_dssp             TCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHH-HHHEE--EEEEEEECSCCCTTCC--CCC------C
T ss_pred             CCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHH-HHHhc--cCCEEEEEeccCCCCc--ccc------C
Confidence            9999999998888888876   2  4899999999976554443 89999  9999999864321100  000      0


Q ss_pred             HHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCC-CCeEEEe
Q psy9949         307 AFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHL-RGKIILN  382 (383)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~-~gkvvl~  382 (383)
                      ...+..    +++.+.|..       ...++++++++++++|++  .++++++|||+++++||+.+.+++. .+|++++
T Consensus       296 ~~~~~~----~~~~i~g~~-------~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~  363 (370)
T 4ej6_A          296 PFDILF----RELRVLGSF-------INPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPS  363 (370)
T ss_dssp             HHHHHH----TTCEEEECC-------SCTTCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC
T ss_pred             HHHHHh----CCcEEEEec-------cChHHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEc
Confidence            111111    122222221       234568999999999998  4578999999999999999987764 4677765

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-48  Score=367.08  Aligned_cols=310  Identities=20%  Similarity=0.269  Sum_probs=248.9

Q ss_pred             ccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          24 STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      .++|+++...++++  .++++ +.|.|+|+++||||||.++|||++|++++.|..                ....+|.++
T Consensus        20 ~~~~~a~~~~~~~~--~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~~~~~P~v~   80 (369)
T 1uuf_A           20 GLKIKAVGAYSAKQ--PLEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW----------------AGTVYPCVP   80 (369)
T ss_dssp             ---CEEEEBSSTTS--CCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTT----------------SCCCSSBCC
T ss_pred             CceEEEEEEcCCCC--CcEEE-EecCCCCCCCeEEEEEEEEeecHHHHHHhcCCC----------------CCCCCCeec
Confidence            56799999876543  47888 899999999999999999999999999998751                223578999


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEee---------------------------------cCCCCCCceEEEeecCccc
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGVI---------------------------------QPHKQGSFSKLILADSALV  150 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~---------------------------------~~~~~g~~a~~~~v~~~~~  150 (383)
                      |||++|+|+++|++|++|++||||++..                                 +...+|+|+||+++|.+.+
T Consensus        81 GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~  160 (369)
T 1uuf_A           81 GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYV  160 (369)
T ss_dssp             CCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGC
T ss_pred             ccCceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhE
Confidence            9999999999999999999999998631                                 1123599999999999999


Q ss_pred             ccCCCC-CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHH
Q psy9949         151 HKKPSN-ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLV  228 (383)
Q Consensus       151 ~~ip~~-~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~  228 (383)
                      +++|++ +++++||+++++++|||+++.. .++    ++|++|||+| +|++|++++|+|+.+|++|++++ ++++.+++
T Consensus       161 ~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a  234 (369)
T 1uuf_A          161 LRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQA----GPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA  234 (369)
T ss_dssp             EECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             EECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCC----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            999999 9999999999999999999984 577    9999999999 59999999999999999999999 45678899


Q ss_pred             HhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHH
Q psy9949         229 TSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAF  308 (383)
Q Consensus       229 ~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~  308 (383)
                      +++|++.++++++.++.+++.  .++|++||++|++.....+ +++++  ++|+++.+|...           +.. ..+
T Consensus       235 ~~lGa~~vi~~~~~~~~~~~~--~g~Dvvid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~~-~~~  297 (369)
T 1uuf_A          235 KALGADEVVNSRNADEMAAHL--KSFDFILNTVAAPHNLDDF-TTLLK--RDGTMTLVGAPA-----------TPH-KSP  297 (369)
T ss_dssp             HHHTCSEEEETTCHHHHHTTT--TCEEEEEECCSSCCCHHHH-HTTEE--EEEEEEECCCC-------------------
T ss_pred             HHcCCcEEeccccHHHHHHhh--cCCCEEEECCCCHHHHHHH-HHHhc--cCCEEEEeccCC-----------CCc-ccc
Confidence            999999999998876655443  5899999999987543333 89999  999999986421           100 011


Q ss_pred             HHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         309 DLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +..  .+    ..++..+. +......++++++++++++|++++.+. +|||+++++||+.+.+++..||+||++
T Consensus       298 ~~~--~~----~~~~~~i~-g~~~~~~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          298 EVF--NL----IMKRRAIA-GSMIGGIPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             CHH--HH----HTTTCEEE-ECCSCCHHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             CHH--HH----HhCCcEEE-EeecCCHHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            111  11    11222221 222345788999999999999988764 799999999999999988889999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.8e-48  Score=369.43  Aligned_cols=316  Identities=16%  Similarity=0.147  Sum_probs=253.4

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHH-HhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVA-MLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      ...|++|||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++ ++.|.                .+ ..+
T Consensus         3 ~~~~~~mka~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~----------------~~-~~~   62 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK----------------HK-DGF   62 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTC----------------CT-TSC
T ss_pred             CCCcceeEEEEEecCCCC--eEEE-EeeCCCCCCCEEEEEEeEEeechhhHHHHhCCC----------------CC-CCC
Confidence            456789999999988754  7788 899999999999999999999999999 88875                11 457


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEeec---------------------------C------------------C
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------P------------------H  134 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~------------------~  134 (383)
                      |.++|||++|+|+++|++|++|++||||++...                           .                  .
T Consensus        63 P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~  142 (374)
T 1cdo_A           63 PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFL  142 (374)
T ss_dssp             SEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGG
T ss_pred             CcccCccceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCccccccc
Confidence            899999999999999999999999999987521                           0                  0


Q ss_pred             CCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q psy9949         135 KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI  214 (383)
Q Consensus       135 ~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~  214 (383)
                      .+|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++    +++++|||+| +|++|++++|+|+.+|+
T Consensus       143 ~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~VlV~G-aG~vG~~a~qla~~~Ga  217 (374)
T 1cdo_A          143 GTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKV----EPGSTCAVFG-LGAVGLAAVMGCHSAGA  217 (374)
T ss_dssp             GTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred             CCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence            148999999999999999999999999999999999999999877888    9999999999 69999999999999999


Q ss_pred             -EEEEEe-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEec
Q psy9949         215 -EVVTTC-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLR  287 (383)
Q Consensus       215 -~Vi~~~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~  287 (383)
                       +|++++ ++++.++++++|++.++++++  .++.+.+.+.  +++|++||++|+......+ +++++  ++ |+++.+|
T Consensus       218 ~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~-~~~l~--~~~G~iv~~G  294 (374)
T 1cdo_A          218 KRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNA-LESCL--KGWGVSVLVG  294 (374)
T ss_dssp             SEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHH-HHTBC--TTTCEEEECS
T ss_pred             CEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHH-HHHhh--cCCcEEEEEc
Confidence             899998 456788999999999998874  4566666542  4899999999986543333 89999  99 9999986


Q ss_pred             CCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-CCHHHHHHHHHHHHcCCcc--cccceeecCCCHH
Q psy9949         288 SPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-PIPYAVKEINKFIERGQIK--PVIDSKYNFCELP  364 (383)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~  364 (383)
                      .....     ..  ...  ...+.   . +. .+.+...    .. ...++++++++++++|+++  ++++++|||++++
T Consensus       295 ~~~~~-----~~--~~~--~~~~~---~-~~-~i~g~~~----~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~  356 (374)
T 1cdo_A          295 WTDLH-----DV--ATR--PIQLI---A-GR-TWKGSMF----GGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVN  356 (374)
T ss_dssp             CCSSS-----CE--EEC--HHHHH---T-TC-EEEECSG----GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHH
T ss_pred             CCCCC-----Cc--ccC--HHHHh---c-CC-eEEEEec----CCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHH
Confidence            43210     00  000  00110   0 11 1221110    00 1257899999999999986  5678999999999


Q ss_pred             HHHHHHhcCCCCCeEEEeC
Q psy9949         365 TAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       365 ~a~~~l~~~~~~gkvvl~~  383 (383)
                      +||+.+.+++. +|+||+|
T Consensus       357 ~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          357 DAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             HHHHHHHTTCC-SEEEEEC
T ss_pred             HHHHHHHCCCe-eEEEEeC
Confidence            99999988875 7999976

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=6.8e-48  Score=362.96  Aligned_cols=312  Identities=20%  Similarity=0.296  Sum_probs=248.7

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      |..+++|+++....+  +..++++ +.|.|+|+++||||||.++|||++|++.+.|..                ....+|
T Consensus         4 m~~~m~~~a~~~~~~--~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~~~~~P   64 (357)
T 2cf5_A            4 MEAERKTTGWAARDP--SGILSPY-TYTLRETGPEDVNIRIICCGICHTDLHQTKNDL----------------GMSNYP   64 (357)
T ss_dssp             --CCCEEEEEEECST--TCCEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHTCTT----------------TCCCSS
T ss_pred             ccCcceeEEEEEccC--CCCcEEE-EecCCCCCCCEEEEEEEEEeecchhhhhhcCCC----------------CCCCCC
Confidence            345678888887653  4558888 899999999999999999999999999998751                124578


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEee-----c---------------------------CCCCCCceEEEeecCc
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI-----Q---------------------------PHKQGSFSKLILADSA  148 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-----~---------------------------~~~~g~~a~~~~v~~~  148 (383)
                      .++|||++|+|+++|++|++|++||||++..     +                           ...+|+|+||+++|++
T Consensus        65 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~  144 (357)
T 2cf5_A           65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQK  144 (357)
T ss_dssp             BCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGG
T ss_pred             eecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechh
Confidence            9999999999999999999999999997521     0                           1146999999999999


Q ss_pred             ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHH
Q psy9949         149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYP-RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKD  226 (383)
Q Consensus       149 ~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~-~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~  226 (383)
                      .++++|+++++++||+++++++|||+++. ..++    + +|++|+|+| +|++|++++|+|+.+|++|++++++ ++.+
T Consensus       145 ~~~~~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~----~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~  218 (357)
T 2cf5_A          145 FVVKIPEGMAVEQAAPLLCAGVTVYSPLS-HFGL----KQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKRE  218 (357)
T ss_dssp             GEEECCSSCCHHHHTGGGTHHHHHHHHHH-HTST----TSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSTTHHH
T ss_pred             hEEECcCCCCHHHhhhhhhhHHHHHHHHH-hcCC----CCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            99999999999999999999999999997 4566    7 999999999 6999999999999999999999955 5667


Q ss_pred             HHH-hcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhh
Q psy9949         227 LVT-SLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVK  305 (383)
Q Consensus       227 ~~~-~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~  305 (383)
                      .++ ++|++.++++++.+....+  .+++|+|||++|++.....+ +++++  ++|+++.+|.....      .  ....
T Consensus       219 ~~~~~lGa~~vi~~~~~~~~~~~--~~g~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~~~------~--~~~~  285 (357)
T 2cf5_A          219 EALQDLGADDYVIGSDQAKMSEL--ADSLDYVIDTVPVHHALEPY-LSLLK--LDGKLILMGVINNP------L--QFLT  285 (357)
T ss_dssp             HHHTTSCCSCEEETTCHHHHHHS--TTTEEEEEECCCSCCCSHHH-HTTEE--EEEEEEECSCCSSC------C--CCCH
T ss_pred             HHHHHcCCceeeccccHHHHHHh--cCCCCEEEECCCChHHHHHH-HHHhc--cCCEEEEeCCCCCC------c--cccC
Confidence            776 9999999998875433222  24899999999987543333 89999  99999998653100      0  0000


Q ss_pred             hHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         306 NAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                       .. +...    +..+.|      ......++++++++++++|++++.+ ++|||+++++||+.+.+++..||+||++
T Consensus       286 -~~-~~~~----~~~i~g------~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          286 -PL-LMLG----RKVITG------SFIGSMKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             -HH-HHHH----TCEEEE------CCSCCHHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEET
T ss_pred             -HH-HHhC----ccEEEE------EccCCHHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeC
Confidence             01 1111    222222      2233578899999999999998766 6999999999999999998889999974

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=4.4e-49  Score=367.89  Aligned_cols=319  Identities=21%  Similarity=0.247  Sum_probs=256.1

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCC-CCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPV-LEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~p~~~G~  105 (383)
                      |||+++.++|.++.++++ +.|.|+|+++||||||.++|||++|+++..|...              ... ..+|.++||
T Consensus         2 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--------------~~~~~~~p~i~G~   66 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPH--------------PLVVGEPPIVVGF   66 (333)
T ss_dssp             CEEEEESSCSSGGGEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHC------------------------CCEECCC
T ss_pred             cEEEEEcccCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcC--------------CCCCCCCCccccc
Confidence            899999999888889999 8999999999999999999999999999987510              011 347899999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHH--HHhhhHHHHHHHHHHHHhhhcC
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEE--AAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~--aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      |++|+|+++|+++++|++||||++...  .+|+|+||+++|.+.++++|+++++++  ||+++++++|||+++.+.+++ 
T Consensus        67 e~~G~V~~vG~~v~~~~~GdrV~~~~~--~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~-  143 (333)
T 1wly_A           67 EAAAVVEEVGPGVTDFTVGERVCTCLP--PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKV-  143 (333)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSS--SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCC-
T ss_pred             eeEEEEEEECCCCCCCCCCCEEEEecC--CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCC-
Confidence            999999999999999999999976531  259999999999999999999999999  999999999999999877888 


Q ss_pred             ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEE
Q psy9949         184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILD  259 (383)
Q Consensus       184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d  259 (383)
                         +++++|+|+|++|++|++++|+++..|++|+++++++ +.+.++++|++.++++++.++.+.+.+   ..++|++||
T Consensus       144 ---~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~  220 (333)
T 1wly_A          144 ---KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYD  220 (333)
T ss_dssp             ---CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             ---CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEE
Confidence               9999999999999999999999999999999999765 667888899999999888777776654   247999999


Q ss_pred             cCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc--cccCCccEEEEEEcC--CH
Q psy9949         260 AAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG--ELCKTNTIRWGFFMP--IP  335 (383)
Q Consensus       260 ~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~  335 (383)
                      |+|+......  +++++  ++|+++.+|.....   ...+..     ...+..    ++  ..+.|....+. ..+  ..
T Consensus       221 ~~g~~~~~~~--~~~l~--~~G~iv~~g~~~~~---~~~~~~-----~~~~~~----~~~~~~i~g~~~~~~-~~~~~~~  283 (333)
T 1wly_A          221 SIGKDTLQKS--LDCLR--PRGMCAAYGHASGV---ADPIRV-----VEDLGV----RGSLFITRPALWHYM-SNRSEID  283 (333)
T ss_dssp             CSCTTTHHHH--HHTEE--EEEEEEECCCTTCC---CCCCCH-----HHHTTT----TTSCEEECCCGGGGS-CSHHHHH
T ss_pred             CCcHHHHHHH--HHhhc--cCCEEEEEecCCCC---cCCCCh-----hHhhhh----cCCcEEEEEeehhhc-cCHHHHH
Confidence            9998554444  89999  99999998653210   000000     001111    12  23333211000 011  13


Q ss_pred             HHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         336 YAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       336 ~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.++++++++++|++++.++++|||+++++||+.+.+++..||+|+++
T Consensus       284 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          284 EGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             HHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            578999999999999999999999999999999999888889999974

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.6e-48  Score=368.28  Aligned_cols=317  Identities=19%  Similarity=0.152  Sum_probs=253.1

Q ss_pred             cccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          23 YSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      .|++|||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|..                +...+|.+
T Consensus         3 ~p~~mkA~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~~~~~P~v   63 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGAD----------------PEGCFPVI   63 (373)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCC----------------TTCCSSBC
T ss_pred             CccceEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCC----------------CCCCCCcc
Confidence            4789999999988754  7788 899999999999999999999999999998851                22457899


Q ss_pred             ccCceeEEEEecCCCCCCCCCCCEEEEeec---------------------------C------------------CCCC
Q psy9949         103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------P------------------HKQG  137 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~------------------~~~g  137 (383)
                      +|||++|+|+++|++|++|++||||++...                           .                  ..+|
T Consensus        64 ~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G  143 (373)
T 2fzw_A           64 LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTS  143 (373)
T ss_dssp             CCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTC
T ss_pred             ccccccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCc
Confidence            999999999999999999999999987521                           0                  0248


Q ss_pred             CceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EE
Q psy9949         138 SFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EV  216 (383)
Q Consensus       138 ~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~V  216 (383)
                      +|+||+++|++.++++|+++++++||++++++.|||+++.+.+++    +++++|||+| +|++|++++|+|+.+|+ +|
T Consensus       144 ~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~VlV~G-aG~vG~~avqla~~~Ga~~V  218 (373)
T 2fzw_A          144 TFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL----EPGSVCAVFG-LGGVGLAVIMGCKVAGASRI  218 (373)
T ss_dssp             CSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEE
T ss_pred             cceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeE
Confidence            999999999999999999999999999999999999999878888    9999999999 69999999999999999 89


Q ss_pred             EEEe-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCCC
Q psy9949         217 VTTC-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSPF  290 (383)
Q Consensus       217 i~~~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~~  290 (383)
                      ++++ ++++.++++++|++.++++++  .++.+.+.+.  +++|++||++|+......+ +++++  ++ |+++.+|...
T Consensus       219 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~-~~~l~--~~~G~iv~~G~~~  295 (373)
T 2fzw_A          219 IGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAA-LEACH--KGWGVSVVVGVAA  295 (373)
T ss_dssp             EEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH-HHTBC--TTTCEEEECSCCC
T ss_pred             EEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHH-HHhhc--cCCcEEEEEecCC
Confidence            9998 456788999999999998874  4566666543  4899999999986544443 89999  99 9999986432


Q ss_pred             ccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHH
Q psy9949         291 LKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFE  368 (383)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~  368 (383)
                      ...    .  ....  ...+    +.+. .+.|...  + .....++++++++++++|+++  ++++++|||+++++||+
T Consensus       296 ~~~----~--~~~~--~~~~----~~~~-~i~g~~~--~-~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~  359 (373)
T 2fzw_A          296 SGE----E--IATR--PFQL----VTGR-TWKGTAF--G-GWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFE  359 (373)
T ss_dssp             TTC----C--EEEC--THHH----HTTC-EEEECSG--G-GCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHH
T ss_pred             CCc----e--eeeC--HHHH----hcCC-EEEEecc--C-CCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHH
Confidence            100    0  0000  0011    0011 1221110  0 001257899999999999986  57789999999999999


Q ss_pred             HHhcCCCCCeEEEeC
Q psy9949         369 KVQQGHLRGKIILNA  383 (383)
Q Consensus       369 ~l~~~~~~gkvvl~~  383 (383)
                      .+.+++. +|+||++
T Consensus       360 ~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          360 LMHSGKS-IRTVVKI  373 (373)
T ss_dssp             HHHHTCC-SEEEEEC
T ss_pred             HHhCCCc-ceEEEeC
Confidence            9988776 6999975

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=9.7e-49  Score=371.11  Aligned_cols=316  Identities=19%  Similarity=0.138  Sum_probs=252.5

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      .+.|++|||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|.                .+ ..+|
T Consensus         4 ~~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----------------~~-~~~P   63 (373)
T 1p0f_A            4 AGKDITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEI----------------IP-SKFP   63 (373)
T ss_dssp             TTSCEEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTS----------------SC-CCSS
T ss_pred             cCCcceeEEEEEEcCCCC--eeEE-EeeCCCCCCCeEEEEEeEEeecchhHHHhcCC----------------CC-CCCC
Confidence            446889999999988754  7788 89999999999999999999999999999885                11 4578


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEeec---------------------------C------------------CC
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------P------------------HK  135 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~------------------~~  135 (383)
                      .++|||++|+|+++|++|++|++||||++...                           .                  ..
T Consensus        64 ~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~  143 (373)
T 1p0f_A           64 VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMG  143 (373)
T ss_dssp             BCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTT
T ss_pred             cccCcCceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccC
Confidence            99999999999999999999999999987521                           0                  02


Q ss_pred             CCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Q psy9949         136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-  214 (383)
Q Consensus       136 ~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-  214 (383)
                      +|+|+||+++|++.++++|++++++ ||++++++.|||+++.+.+++    +++++|||+| +|++|++++|+|+.+|+ 
T Consensus       144 ~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~  217 (373)
T 1p0f_A          144 TSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKV----TPGSTCAVFG-LGGVGFSAIVGCKAAGAS  217 (373)
T ss_dssp             TCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHHTCS
T ss_pred             CccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCC
Confidence            4999999999999999999999999 999999999999999878888    9999999999 69999999999999999 


Q ss_pred             EEEEEe-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecC
Q psy9949         215 EVVTTC-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRS  288 (383)
Q Consensus       215 ~Vi~~~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~  288 (383)
                      +|++++ +++++++++++|+++++++++  .++.+.+.+.  +++|+|||++|+......+ +++++  ++ |+++.+|.
T Consensus       218 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~-~~~l~--~~~G~iv~~G~  294 (373)
T 1p0f_A          218 RIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNA-LQSTY--CGSGVTVVLGL  294 (373)
T ss_dssp             EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH-HHTBC--TTTCEEEECCC
T ss_pred             eEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHH-HHHHh--cCCCEEEEEcc
Confidence            899998 456788999999999998874  4577666543  4899999999986544443 89999  99 99999864


Q ss_pred             CCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHH
Q psy9949         289 PFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTA  366 (383)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a  366 (383)
                      .....    ..  ...  ...+.   . +. .+.|...    .....++++++++++++|+++  ++++++|||+++++|
T Consensus       295 ~~~~~----~~--~~~--~~~~~---~-~~-~i~g~~~----~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A  357 (373)
T 1p0f_A          295 ASPNE----RL--PLD--PLLLL---T-GR-SLKGSVF----GGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKA  357 (373)
T ss_dssp             CCTTC----CE--EEC--THHHH---T-TC-EEEECSG----GGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHH
T ss_pred             CCCCC----cc--ccC--HHHhc---c-Cc-eEEeecc----CCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHH
Confidence            32100    00  000  00010   0 11 1221110    011236899999999999986  567899999999999


Q ss_pred             HHHHhcCCCCCeEEEeC
Q psy9949         367 FEKVQQGHLRGKIILNA  383 (383)
Q Consensus       367 ~~~l~~~~~~gkvvl~~  383 (383)
                      |+.+.+++. +|+||++
T Consensus       358 ~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          358 FELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             HHHTTTSSC-SEEEEEC
T ss_pred             HHHHHCCCc-ceEEEeC
Confidence            999987775 7999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=9.2e-49  Score=380.37  Aligned_cols=337  Identities=21%  Similarity=0.249  Sum_probs=259.3

Q ss_pred             cCCCcccceeeEEEeecC-------------CCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhh
Q psy9949          19 NHLKYSTRTAAWQISSYG-------------GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSL   85 (383)
Q Consensus        19 ~~~~~~~~~~a~~~~~~g-------------~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~   85 (383)
                      ..+++|.+|||+++.+++             ....++++ +.|.|+|+++||||||.++|||++|++...+.+...+...
T Consensus        23 ~~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~  101 (456)
T 3krt_A           23 AALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFL  101 (456)
T ss_dssp             HHSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHH
T ss_pred             ccCCCCcceEEEEEeccccccccccccccCCCCCCcEEE-EccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhh
Confidence            356789999999999872             12468898 8999999999999999999999999987654321111000


Q ss_pred             hccc-ccCCCCCCCCC-ccccCceeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCc
Q psy9949          86 RQLE-TCSVEPVLEFP-LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSF  139 (383)
Q Consensus        86 ~~~~-~~~~~~~~~~p-~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~  139 (383)
                      ..+. ...+.....+| .++|||++|+|+++|++|++|++||||++.+..                        ..+|+|
T Consensus       102 ~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~  181 (456)
T 3krt_A          102 ERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGL  181 (456)
T ss_dssp             HHHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSS
T ss_pred             hhccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcc
Confidence            0000 00000113456 699999999999999999999999999985421                        124999


Q ss_pred             eEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHh--hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEE
Q psy9949         140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQIT--AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVV  217 (383)
Q Consensus       140 a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi  217 (383)
                      +||+++|.++++++|+++++++||+++++++|||+++...  +++    ++|++|+|+|++|++|++++|+|+.+|++|+
T Consensus       182 aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~----~~g~~VlV~GasG~vG~~avqlak~~Ga~vi  257 (456)
T 3krt_A          182 AEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGM----KQGDNVLIWGASGGLGSYATQFALAGGANPI  257 (456)
T ss_dssp             BSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCC----CTTCEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred             cceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCC----CCCCEEEEECCCCHHHHHHHHHHHHcCCeEE
Confidence            9999999999999999999999999999999999999754  677    9999999999889999999999999999999


Q ss_pred             EEecC-chHHHHHhcCCCeeeeCCChHH-----------------HHHHhc---CCCccEEEEcCCCCcccccccccccc
Q psy9949         218 TTCSG-DAKDLVTSLNPNLVIDYNEPEA-----------------MHSIAG---AGPYDVILDAAGIPLDQINSYLPFLK  276 (383)
Q Consensus       218 ~~~~~-~~~~~~~~lg~~~v~~~~~~~~-----------------~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~  276 (383)
                      +++++ ++.++++++|++.++++.+.++                 .+.+.+   ..++|+|||++|+......  +++++
T Consensus       258 ~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~--~~~l~  335 (456)
T 3krt_A          258 CVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGAS--VFVTR  335 (456)
T ss_dssp             EEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHH--HHHEE
T ss_pred             EEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHH--HHHhh
Confidence            98854 5678999999999999887543                 355544   3589999999998554444  89999


Q ss_pred             cCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccce
Q psy9949         277 TGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDS  356 (383)
Q Consensus       277 ~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~  356 (383)
                        ++|+++.+|...       +........  .+..    +...+      .+......+++.++++++++|++++.+++
T Consensus       336 --~~G~iv~~G~~~-------~~~~~~~~~--~~~~----~~~~i------~g~~~~~~~~~~~~~~l~~~g~l~~~i~~  394 (456)
T 3krt_A          336 --KGGTITTCASTS-------GYMHEYDNR--YLWM----SLKRI------IGSHFANYREAWEANRLIAKGRIHPTLSK  394 (456)
T ss_dssp             --EEEEEEESCCTT-------CSEEEEEHH--HHHH----TTCEE------EECCSCCHHHHHHHHHHHHTTSSCCCEEE
T ss_pred             --CCcEEEEEecCC-------CcccccCHH--HHHh----cCeEE------EEeccCCHHHHHHHHHHHHcCCcccceeE
Confidence              999999986431       100010000  1111    11111      23333456778889999999999999999


Q ss_pred             eecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         357 KYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       357 ~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +|||+++++|++.+.+++..||+||.+
T Consensus       395 ~~~l~~~~eA~~~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          395 VYSLEDTGQAAYDVHRNLHQGKVGVLC  421 (456)
T ss_dssp             EEEGGGHHHHHHHHHTTCSSSEEEEES
T ss_pred             EEcHHHHHHHHHHHHhCCCCCcEEEEe
Confidence            999999999999999999999999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.8e-48  Score=362.87  Aligned_cols=318  Identities=22%  Similarity=0.262  Sum_probs=256.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.++|.++.++++ +.+.|+|+++||+|||.++|||++|++...|.                .....+|.++|||
T Consensus         2 Mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----------------~~~~~~p~v~G~E   64 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGL----------------YPPPSLPSGLGTE   64 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTS----------------SCCSSSSBCCCSC
T ss_pred             cEEEEEcCCCChhheEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhCCC----------------CCCCCCCCCCCce
Confidence            899999998888888998 89999999999999999999999999999885                1223578999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+++|+++++|++|||| ++++ ..+|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++    
T Consensus        65 ~~G~V~~vG~~v~~~~~GdrV-~~~g-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~----  138 (327)
T 1qor_A           65 AAGIVSKVGSGVKHIKAGDRV-VYAQ-SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEI----  138 (327)
T ss_dssp             EEEEEEEECTTCCSCCTTCEE-EESC-CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCC----
T ss_pred             eEEEEEEECCCCCCCCCCCEE-EECC-CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCC----
Confidence            999999999999999999999 5441 1259999999999999999999999999999999999999999877888    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g  262 (383)
                      +++++|+|+||+|++|++++|+++..|++|++++++ ++.+.++++|++.++++++.++.+.+.+.   .++|++||++|
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence            999999999999999999999999999999999966 45678888999999998887777776542   47999999999


Q ss_pred             CCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccE-EEEE-EcCCHHHHHH
Q psy9949         263 IPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTI-RWGF-FMPIPYAVKE  340 (383)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~  340 (383)
                      .......  +++++  ++|+++.++......   ..+..    .  .+...   ......+... .+.. .....+.+++
T Consensus       219 ~~~~~~~--~~~l~--~~G~iv~~g~~~~~~---~~~~~----~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (327)
T 1qor_A          219 RDTWERS--LDCLQ--RRGLMVSFGNSSGAV---TGVNL----G--ILNQK---GSLYVTRPSLQGYITTREELTEASNE  282 (327)
T ss_dssp             GGGHHHH--HHTEE--EEEEEEECCCTTCCC---CCBCT----H--HHHHT---TSCEEECCCHHHHCCSHHHHHHHHHH
T ss_pred             hHHHHHH--HHHhc--CCCEEEEEecCCCCC---CccCH----H--HHhhc---cceEEEccchhhhcCCHHHHHHHHHH
Confidence            5444444  89999  999999987532110   00100    0  11111   0111111100 0000 0002467899


Q ss_pred             HHHHHHcCCcccccc--eeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         341 INKFIERGQIKPVID--SKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       341 ~~~l~~~g~l~~~~~--~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++++++|++++.++  ++|+|+++++|++.+.+++..||+||++
T Consensus       283 ~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          283 LFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999999999888  9999999999999999988889999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.3e-48  Score=363.70  Aligned_cols=309  Identities=23%  Similarity=0.324  Sum_probs=251.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++.+.|..+               ....+|.++|||
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~v~GhE   62 (339)
T 1rjw_A            1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP---------------VKPKLPLIPGHE   62 (339)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS---------------SCCCSSBCCCSC
T ss_pred             CeEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC---------------cCCCCCeecccc
Confidence            799999988754  7888 8999999999999999999999999999888511               124578999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEe-----e--------------------cCCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGV-----I--------------------QPHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~-----~--------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++|++|++||||++.     |                    +...+|+|+||+++|++.++++|+++++++
T Consensus        63 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~  142 (339)
T 1rjw_A           63 GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEE  142 (339)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHH
T ss_pred             ceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHH
Confidence            999999999999999999999863     1                    112469999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      ||+++++++|||+++.. .++    +++++|||+|+ |++|++++|+|+.+|++|++++++ ++.++++++|++.+++++
T Consensus       143 aa~l~~~~~ta~~~l~~-~~~----~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~  216 (339)
T 1rjw_A          143 AAPIFCAGVTTYKALKV-TGA----KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPL  216 (339)
T ss_dssp             HGGGGTHHHHHHHHHHH-HTC----CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             hhhhhhhHHHHHHHHHh-cCC----CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCC
Confidence            99999999999999974 477    99999999996 889999999999999999999955 567888999999999988


Q ss_pred             ChHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhcccc
Q psy9949         241 EPEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGE  319 (383)
Q Consensus       241 ~~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (383)
                      +.++.+.+.+. +++|++||++|+......+ +++++  ++|+++.+|....          ........+.        
T Consensus       217 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~--~~G~~v~~g~~~~----------~~~~~~~~~~--------  275 (339)
T 1rjw_A          217 KEDAAKFMKEKVGGVHAAVVTAVSKPAFQSA-YNSIR--RGGACVLVGLPPE----------EMPIPIFDTV--------  275 (339)
T ss_dssp             TSCHHHHHHHHHSSEEEEEESSCCHHHHHHH-HHHEE--EEEEEEECCCCSS----------EEEEEHHHHH--------
T ss_pred             CccHHHHHHHHhCCCCEEEECCCCHHHHHHH-HHHhh--cCCEEEEecccCC----------CCccCHHHHH--------
Confidence            77776666543 5899999999985543333 88999  9999999864310          0000001111        


Q ss_pred             ccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         320 LCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                       .++..+. +......++++++++++++|++++. .++|||+++++||+.+.+++..||+||++
T Consensus       276 -~~~~~i~-g~~~~~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          276 -LNGIKII-GSIVGTRKDLQEALQFAAEGKVKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             -HTTCEEE-ECCSCCHHHHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             -hCCcEEE-EeccCCHHHHHHHHHHHHcCCCCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence             1222221 2233457889999999999999876 47899999999999999988889999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=7.5e-50  Score=371.83  Aligned_cols=316  Identities=16%  Similarity=0.166  Sum_probs=249.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.++|+++.++++ +.|.|+|+++||||||.++|||++|++.+.|..+               ....+|.++|||
T Consensus         1 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~v~G~E   64 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGK---------------IIRHFPMIPGID   64 (324)
T ss_dssp             CEEEEEEESSSSEEEEEE-ECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTT---------------CCCSSSBCCCSE
T ss_pred             CceEEEecCCCCceeeEe-ecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCC---------------CCCCCCccccce
Confidence            899999999998889999 8999999999999999999999999999988621               235679999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee---cCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI---QPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~---~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      ++|+|+++|  +++|++||||++..   +...+|+|+||+++|.+.++++|+++++++||+++++++|||+++....+..
T Consensus        65 ~~G~V~~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~  142 (324)
T 3nx4_A           65 FAGTVHASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAG  142 (324)
T ss_dssp             EEEEEEEES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcc
Confidence            999999998  57899999999763   2234699999999999999999999999999999999999999987443321


Q ss_pred             ccCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCeeeeCCChHHHHHHhc--CCCccEEEE
Q psy9949         184 LVYPRDK-RVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYDVILD  259 (383)
Q Consensus       184 ~~~~~~~-~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d~v~d  259 (383)
                      .  ++++ +|||+|++|++|++++|+|+.+|++|++++ ++++.++++++|++.++|+++.+.   +++  .+++|++||
T Consensus       143 ~--~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~~~~d~v~d  217 (324)
T 3nx4_A          143 I--RPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE---SRPLEKQLWAGAID  217 (324)
T ss_dssp             C--CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC---CCSSCCCCEEEEEE
T ss_pred             c--CCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH---HHhhcCCCccEEEE
Confidence            1  5533 499999889999999999999999999999 456789999999999999876443   322  247999999


Q ss_pred             cCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHH
Q psy9949         260 AAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVK  339 (383)
Q Consensus       260 ~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (383)
                      |+|++.....  +++++  ++|+++.+|......       ....  ...+...    +..+.+............+.++
T Consensus       218 ~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~-------~~~~--~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~  280 (324)
T 3nx4_A          218 TVGDKVLAKV--LAQMN--YGGCVAACGLAGGFA-------LPTT--VMPFILR----NVRLQGVDSVMTPPARRAEAWA  280 (324)
T ss_dssp             SSCHHHHHHH--HHTEE--EEEEEEECCCTTCSE-------EEEE--SHHHHHH----CCEEEECCSTTCCHHHHHHHHH
T ss_pred             CCCcHHHHHH--HHHHh--cCCEEEEEecCCCCC-------CCCC--HHHHhhc----CeEEEEEeccccChHHHHHHHH
Confidence            9998755554  89999  999999996431100       0000  0111111    2222221100000001146788


Q ss_pred             HHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         340 EINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       340 ~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ++++++++|++++. +++|+++++++||+.+.+++..||+||++
T Consensus       281 ~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          281 RLVKDLPESFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HHHHHSCHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEec
Confidence            99999999999887 99999999999999999999999999975

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=5.5e-48  Score=366.09  Aligned_cols=317  Identities=16%  Similarity=0.164  Sum_probs=252.5

Q ss_pred             CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      ..|++|||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|..                . ..+|.
T Consensus         4 ~~~~~mkA~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~-~~~P~   63 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL----------------V-TPLPV   63 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSS----------------C-CCSSB
T ss_pred             CCceeEEEEEEecCCCc--eEEE-EccCCCCCCCeEEEEEeEEeechhhHHHHcCCC----------------C-CCCCc
Confidence            45789999999988754  7788 899999999999999999999999999998851                1 12789


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeec---------------------------C------------------CCC
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------P------------------HKQ  136 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------~------------------~~~  136 (383)
                      ++|||++|+|+++|++|++|++||||++...                           .                  ..+
T Consensus        64 v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~  143 (374)
T 2jhf_A           64 IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGT  143 (374)
T ss_dssp             CCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTT
T ss_pred             ccCcCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCC
Confidence            9999999999999999999999999987521                           0                  024


Q ss_pred             CCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-E
Q psy9949         137 GSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-E  215 (383)
Q Consensus       137 g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~  215 (383)
                      |+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++    +++++|||+| +|++|++++|+|+.+|+ +
T Consensus       144 G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~  218 (374)
T 2jhf_A          144 STFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV----TQGSTCAVFG-LGGVGLSVIMGCKAAGAAR  218 (374)
T ss_dssp             CCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSE
T ss_pred             ccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCe
Confidence            9999999999999999999999999999999999999999878888    9999999999 79999999999999999 8


Q ss_pred             EEEEe-cCchHHHHHhcCCCeeeeCCC--hHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCC-ceEEEecCC
Q psy9949         216 VVTTC-SGDAKDLVTSLNPNLVIDYNE--PEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRSP  289 (383)
Q Consensus       216 Vi~~~-~~~~~~~~~~lg~~~v~~~~~--~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~~  289 (383)
                      |++++ ++++.++++++|++.++++++  .++.+.+.+.  +++|+|||++|++.....+ +++++  ++ |+++.+|..
T Consensus       219 Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~-~~~l~--~~~G~iv~~G~~  295 (374)
T 2jhf_A          219 IIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTA-LSCCQ--EAYGVSVIVGVP  295 (374)
T ss_dssp             EEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH-HHHBC--TTTCEEEECSCC
T ss_pred             EEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHH-HHHhh--cCCcEEEEeccC
Confidence            99998 456788999999999998874  4566666542  4899999999986544443 88999  99 999998643


Q ss_pred             CccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHH
Q psy9949         290 FLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAF  367 (383)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~  367 (383)
                      ....    ..  ....  ..+    +.+. .+.|...  + .....++++++++++++|+++  ++++++|||+++++||
T Consensus       296 ~~~~----~~--~~~~--~~~----~~~~-~i~g~~~--~-~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~  359 (374)
T 2jhf_A          296 PDSQ----NL--SMNP--MLL----LSGR-TWKGAIF--G-GFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF  359 (374)
T ss_dssp             CTTC----CE--EECT--HHH----HTTC-EEEECSG--G-GCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHH
T ss_pred             CCCC----cc--ccCH--HHH----hcCC-eEEEecc--C-CCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHH
Confidence            2100    00  0000  011    0011 1221110  0 001257899999999999986  4678999999999999


Q ss_pred             HHHhcCCCCCeEEEeC
Q psy9949         368 EKVQQGHLRGKIILNA  383 (383)
Q Consensus       368 ~~l~~~~~~gkvvl~~  383 (383)
                      +.+.+++. +|+||++
T Consensus       360 ~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          360 DLLRSGES-IRTILTF  374 (374)
T ss_dssp             HHHHTTCC-SEEEEEC
T ss_pred             HHHHCCCc-ceEEEeC
Confidence            99988775 7999975

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-48  Score=369.70  Aligned_cols=317  Identities=20%  Similarity=0.191  Sum_probs=252.7

Q ss_pred             CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      ..|++||++++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|..                 ...+|.
T Consensus         2 s~~~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~-----------------~~~~P~   61 (371)
T 1f8f_A            2 SELKDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY-----------------PVPLPA   61 (371)
T ss_dssp             --CEEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS-----------------CCCSSB
T ss_pred             CccccceEEEEcCCCCC--eEEE-EecCCCCCCCEEEEEEEEeecCchhHHHHcCCC-----------------CCCCCc
Confidence            34668999999988754  7788 899999999999999999999999999998851                 145789


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEee----------------------------------------c------CCC
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVI----------------------------------------Q------PHK  135 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~----------------------------------------~------~~~  135 (383)
                      ++|||++|+|+++|++|++|++||||++..                                        +      ...
T Consensus        62 v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~  141 (371)
T 1f8f_A           62 VLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFA  141 (371)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGG
T ss_pred             ccCcccceEEEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccC
Confidence            999999999999999999999999998731                                        0      012


Q ss_pred             CCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Q psy9949         136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-  214 (383)
Q Consensus       136 ~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-  214 (383)
                      +|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++    +++++|||+| +|++|++++|+|+.+|+ 
T Consensus       142 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~----~~g~~VlV~G-aG~vG~~a~qlak~~Ga~  216 (371)
T 1f8f_A          142 QSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKV----TPASSFVTWG-AGAVGLSALLAAKVCGAS  216 (371)
T ss_dssp             TCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCC----CTTCEEEEES-CSHHHHHHHHHHHHHTCS
T ss_pred             CccccCeEEechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCC
Confidence            48999999999999999999999999999999999999999778888    9999999999 69999999999999999 


Q ss_pred             EEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCc
Q psy9949         215 EVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFL  291 (383)
Q Consensus       215 ~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~  291 (383)
                      +|++++++ ++.++++++|++.++++++.++.+++.+.  +++|+|||++|.+.....+ +++++  ++|+++.+|....
T Consensus       217 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~~  293 (371)
T 1f8f_A          217 IIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQG-VDALG--ILGKIAVVGAPQL  293 (371)
T ss_dssp             EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHH-HHTEE--EEEEEEECCCCST
T ss_pred             eEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHH-HHHHh--cCCEEEEeCCCCC
Confidence            79999854 57789999999999999887877777653  3799999999986543333 89999  9999999865321


Q ss_pred             cCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCccc--ccceeecCCCHHHHHHH
Q psy9949         292 KNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKP--VIDSKYNFCELPTAFEK  369 (383)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l~~~~~a~~~  369 (383)
                      ..  ...+    .  ...+..    ++..+.+....   .....++++++++++++|++++  ++++ |||+++++||+.
T Consensus       294 ~~--~~~~----~--~~~~~~----~~~~i~g~~~~---~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~  357 (371)
T 1f8f_A          294 GT--TAQF----D--VNDLLL----GGKTILGVVEG---SGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAID  357 (371)
T ss_dssp             TC--CCCC----C--HHHHHH----TTCEEEECSGG---GSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHH
T ss_pred             CC--cccc----C--HHHHHh----CCCEEEEeCCC---CCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHH
Confidence            00  0001    0  011111    12222221100   0012578999999999999875  5677 999999999999


Q ss_pred             HhcCCCCCeEEEeC
Q psy9949         370 VQQGHLRGKIILNA  383 (383)
Q Consensus       370 l~~~~~~gkvvl~~  383 (383)
                      +.+++. +|+||++
T Consensus       358 ~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          358 SRKGIT-LKPIIKI  370 (371)
T ss_dssp             HHHTSC-SEEEEEC
T ss_pred             HHCCCc-eEEEEee
Confidence            988776 7999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.5e-48  Score=366.39  Aligned_cols=313  Identities=18%  Similarity=0.213  Sum_probs=245.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      |||++++++|.   ++++ +.|.|++ +||||||||.++|||++|++.+.|.                 ....+|+++||
T Consensus         1 MkAvv~~~~g~---l~v~-e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~-----------------~~~~~P~i~G~   59 (346)
T 4a2c_A            1 MKSVVNDTDGI---VRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKN-----------------GAHYYPITLGH   59 (346)
T ss_dssp             CEEEEECSSSC---EEEE-ECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSS-----------------CSSSSSBCCCC
T ss_pred             CCEEEEecCCC---EEEE-EEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCC-----------------CCCCCCccccE
Confidence            89999998874   7888 8999984 6999999999999999999988876                 22567999999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEee------------------------cCCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVI------------------------QPHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      |++|+|+++|++|+++++||||.+..                        +...+|+|+||+++|.+.++++|+++++++
T Consensus        60 E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~  139 (346)
T 4a2c_A           60 EFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIED  139 (346)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGG
T ss_pred             EEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHH
Confidence            99999999999999999999998642                        123569999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec-CchHHHHHhcCCCeeeeC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS-GDAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~-~~~~~~~~~lg~~~v~~~  239 (383)
                      ||++++ +.++++++ ...++    +++++|+|+| +|++|++++|+|+.+|++ ++++++ ++++++++++|+++++|+
T Consensus       140 aa~l~~-~~~~~~~~-~~~~~----~~g~~VlV~G-aG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~  212 (346)
T 4a2c_A          140 GAFIEP-ITVGLHAF-HLAQG----CENKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNS  212 (346)
T ss_dssp             GGGHHH-HHHHHHHH-HHTTC----CTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             HHhchH-HHHHHHHH-HHhcc----CCCCEEEEEC-CCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeC
Confidence            998763 34455554 47788    9999999998 699999999999999995 455554 456789999999999999


Q ss_pred             CChHHHHHHh---cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIA---GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~---~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      ++.++.+.+.   +..++|+++|++|++.....+ +++++  ++|+++.+|.....          .......+... +.
T Consensus       213 ~~~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~-~~~l~--~~G~~v~~g~~~~~----------~~~~~~~~~~~-~~  278 (346)
T 4a2c_A          213 SEMSAPQMQSVLRELRFNQLILETAGVPQTVELA-VEIAG--PHAQLALVGTLHQD----------LHLTSATFGKI-LR  278 (346)
T ss_dssp             TTSCHHHHHHHHGGGCSSEEEEECSCSHHHHHHH-HHHCC--TTCEEEECCCCSSC----------EEECHHHHHHH-HH
T ss_pred             CCCCHHHHHHhhcccCCcccccccccccchhhhh-hheec--CCeEEEEEeccCCC----------ccccccCHHHH-hh
Confidence            9877665544   456899999999987765544 89999  99999998643110          00011111111 11


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCCCCeEEEe
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHLRGKIILN  382 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~  382 (383)
                      +++.+.|.... .......++++++++++++|++  +++++++|||+++++|++.+.+++..||+||.
T Consensus       279 k~~~i~G~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          279 KELTVIGSWMN-YSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             HTCEEEECCTT-CCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             ceeEEEEEecc-ccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEE
Confidence            12233332110 0011235789999999999987  45789999999999999999999999999984

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.5e-48  Score=361.94  Aligned_cols=315  Identities=21%  Similarity=0.308  Sum_probs=254.1

Q ss_pred             cccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          23 YSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      +|.+|||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|..+               ....+|.+
T Consensus         2 ~p~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~v   63 (347)
T 2hcy_A            2 IPETQKGVIFYESHGK--LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP---------------LPVKLPLV   63 (347)
T ss_dssp             CCSEEEEEEESSTTCC--CEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS---------------SCCCSSEE
T ss_pred             CCcccEEEEEeCCCCC--CEEE-EeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC---------------CCCCCCcc
Confidence            5778999999998854  7888 8999999999999999999999999999988511               12457899


Q ss_pred             ccCceeEEEEecCCCCCCCCCCCEEEEe-----ec--------------------CCCCCCceEEEeecCcccccCCCCC
Q psy9949         103 LGRDFCGKIVAKGPRVTDLNIDDVVYGV-----IQ--------------------PHKQGSFSKLILADSALVHKKPSNI  157 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~--------------------~~~~g~~a~~~~v~~~~~~~ip~~~  157 (383)
                      +|||++|+|+++|++|++|++||||++.     |+                    ...+|+|+||+++|++.++++|+++
T Consensus        64 ~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~  143 (347)
T 2hcy_A           64 GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGT  143 (347)
T ss_dssp             CCCEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTC
T ss_pred             cCccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCC
Confidence            9999999999999999999999999863     11                    1236999999999999999999999


Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCee
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLV  236 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v  236 (383)
                      ++++||+++++++|||+++. ..++    +++++|||+|++|++|++++++++..|++|+++++ .++.+.++++|++.+
T Consensus       144 ~~~~aa~l~~~~~ta~~~l~-~~~~----~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~  218 (347)
T 2hcy_A          144 DLAQVAPILCAGITVYKALK-SANL----MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVF  218 (347)
T ss_dssp             CHHHHGGGGTHHHHHHHHHH-TTTC----CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEE
T ss_pred             CHHHHHHHhhhHHHHHHHHH-hcCC----CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceE
Confidence            99999999999999999997 4577    99999999998899999999999999999999995 456788889999988


Q ss_pred             eeCC-ChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949         237 IDYN-EPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS  313 (383)
Q Consensus       237 ~~~~-~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (383)
                      +|+. ..++.+.+.+.  +++|++||++|.......+ +++++  ++|+++.++.....       ....  ....+.. 
T Consensus       219 ~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~~~-------~~~~--~~~~~~~-  285 (347)
T 2hcy_A          219 IDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEAS-TRYVR--ANGTTVLVGMPAGA-------KCCS--DVFNQVV-  285 (347)
T ss_dssp             EETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHH-TTSEE--EEEEEEECCCCTTC-------EEEE--EHHHHHH-
T ss_pred             EecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHH-HHHHh--cCCEEEEEeCCCCC-------CCCC--CHHHHhh-
Confidence            8877 45565555432  2899999999985443333 88999  99999998653100       0000  0011111 


Q ss_pred             hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                         ++..+.      +......++++++++++++|++++. .++|||+++++||+.+.+++..||+||++
T Consensus       286 ---~~~~i~------g~~~~~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          286 ---KSISIV------GSYVGNRADTREALDFFARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             ---TTCEEE------ECCCCCHHHHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             ---CCcEEE------EccCCCHHHHHHHHHHHHhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEec
Confidence               122222      2233457889999999999999876 46899999999999999988889999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=9e-49  Score=370.33  Aligned_cols=320  Identities=15%  Similarity=0.132  Sum_probs=252.6

Q ss_pred             ccceeeEEEeecCCC-ceeEeeccccCCCCC--CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          24 STRTAAWQISSYGGA-DELQFNDNVKTPILK--SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~-~~l~~~~~~~~p~~~--~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      |++||++++.++|++ +.++++ +.|.|+|+  ++||+|||.++|||++|++++.|..+               ....+|
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~-~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~P   64 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQ-SFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYP---------------SKPAKT   64 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEE-EEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSS---------------CCCCCB
T ss_pred             CceEEEEEeccCCCchheeEEe-eccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCC---------------CCCCCC
Confidence            457999999998875 447888 78888877  99999999999999999999988521               112345


Q ss_pred             ---------ccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCC-----------CCCHH
Q psy9949         101 ---------LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPS-----------NISDE  160 (383)
Q Consensus       101 ---------~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~-----------~~~~~  160 (383)
                               .++|||++|+|+++|+++++|++||||++...  .+|+|+||+++|.+.++++|+           +++++
T Consensus        65 ~~~~~~~p~~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~  142 (364)
T 1gu7_A           65 TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV--NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTIN  142 (364)
T ss_dssp             STTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEEEESSS--CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHH
T ss_pred             ccccccCcccccCceeEEEEEEeCCCCCcCCCCCEEEecCC--CCCcchheEecCHHHeEEcCCccccccccccCCCCHH
Confidence                     89999999999999999999999999998742  359999999999999999999           89999


Q ss_pred             HHHhhhHHHHHHHHHHHHhhhcCccCCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch----HHHHHhcCCC
Q psy9949         161 EAAGVLYTGLTAWSALQITAALGLVYPRD-KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA----KDLVTSLNPN  234 (383)
Q Consensus       161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~-~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~----~~~~~~lg~~  234 (383)
                      +||+++++++|||+++.+.+++    ++| ++|||+|++|++|++++|+|+.+|++|++++++ ++    .++++++|++
T Consensus       143 ~aa~l~~~~~ta~~~l~~~~~~----~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~  218 (364)
T 1gu7_A          143 QGATISVNPLTAYLMLTHYVKL----TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT  218 (364)
T ss_dssp             HHHTCTTHHHHHHHHHHSSSCC----CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             HHhhccccHHHHHHHHHHhhcc----CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe
Confidence            9999999999999999866788    999 999999988999999999999999999999854 33    4677899999


Q ss_pred             eeeeCCC---hHHHHHHhc-----CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhh
Q psy9949         235 LVIDYNE---PEAMHSIAG-----AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKN  306 (383)
Q Consensus       235 ~v~~~~~---~~~~~~i~~-----~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~  306 (383)
                      +++++++   .++.+++++     ..++|+||||+|+......  +++++  ++|+++.+|......       ....  
T Consensus       219 ~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~--~~~l~--~~G~~v~~g~~~~~~-------~~~~--  285 (364)
T 1gu7_A          219 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGI--ARKLN--NNGLMLTYGGMSFQP-------VTIP--  285 (364)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHH--HHTSC--TTCEEEECCCCSSCC-------EEEC--
T ss_pred             EEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHHHH--HHHhc--cCCEEEEecCCCCCC-------cccC--
Confidence            9999875   566666653     3589999999998876644  89999  999999986431100       0000  


Q ss_pred             HHHHhhhhhccccccCCccEEEEEEcC----CHHHHHHHHHHHHcCCcccccceeecCC---CHHHHHHHHhcCCCCCeE
Q psy9949         307 AFDLLKSNFESGELCKTNTIRWGFFMP----IPYAVKEINKFIERGQIKPVIDSKYNFC---ELPTAFEKVQQGHLRGKI  379 (383)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~g~l~~~~~~~~~l~---~~~~a~~~l~~~~~~gkv  379 (383)
                      ...+..    ++..+.+.... .....    ..++++++++++++|++++.+..+++++   ++++||+.+.+++..||+
T Consensus       286 ~~~~~~----~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKv  360 (364)
T 1gu7_A          286 TSLYIF----KNFTSAGFWVT-ELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQ  360 (364)
T ss_dssp             HHHHHH----SCCEEEECCHH-HHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCE
T ss_pred             HHHHhh----cCcEEEEEchh-HhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceE
Confidence            001111    12222221100 00000    1467899999999999988666677665   999999999988888999


Q ss_pred             EEeC
Q psy9949         380 ILNA  383 (383)
Q Consensus       380 vl~~  383 (383)
                      ||++
T Consensus       361 vv~~  364 (364)
T 1gu7_A          361 LITY  364 (364)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9975

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.6e-48  Score=378.27  Aligned_cols=337  Identities=22%  Similarity=0.213  Sum_probs=256.1

Q ss_pred             cCCCcccceeeEEEeecC----------C-CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhc
Q psy9949          19 NHLKYSTRTAAWQISSYG----------G-ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQ   87 (383)
Q Consensus        19 ~~~~~~~~~~a~~~~~~g----------~-~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~   87 (383)
                      ...++|.+|||+++.+++          . ++.++++ +.|.|+|++|||||||.++|||++|++...+.+.........
T Consensus        17 ~~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~   95 (447)
T 4a0s_A           17 EAAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQ   95 (447)
T ss_dssp             HHSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHH
T ss_pred             hccCCChhheeeeeeccccccccccccCCCCCCceEE-eccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhh
Confidence            345689999999999987          1 2358898 899999999999999999999999986543211000000000


Q ss_pred             cc-ccCCCCCCCCC-ccccCceeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceE
Q psy9949          88 LE-TCSVEPVLEFP-LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSK  141 (383)
Q Consensus        88 ~~-~~~~~~~~~~p-~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~  141 (383)
                      +. ...+.....+| .++|||++|+|+++|++|++|++||||++.+..                        ..+|+|+|
T Consensus        96 ~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~ae  175 (447)
T 4a0s_A           96 NARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAE  175 (447)
T ss_dssp             HHTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBS
T ss_pred             hcccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceee
Confidence            00 00001113456 699999999999999999999999999975310                        11599999


Q ss_pred             EEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH--hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE
Q psy9949         142 LILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI--TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT  219 (383)
Q Consensus       142 ~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~  219 (383)
                      |+++|.+.++++|+++++++||+++++++|||+++..  .+++    ++|++|||+|++|++|++++|+|+..|++|+++
T Consensus       176 y~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~----~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~  251 (447)
T 4a0s_A          176 YGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQM----KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAV  251 (447)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCC----CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             eeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCC----CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEE
Confidence            9999999999999999999999999999999999964  3777    999999999988999999999999999999998


Q ss_pred             ecC-chHHHHHhcCCCeeeeCCChHH------------------HHHHhc--CCCccEEEEcCCCCcccccccccccccC
Q psy9949         220 CSG-DAKDLVTSLNPNLVIDYNEPEA------------------MHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTG  278 (383)
Q Consensus       220 ~~~-~~~~~~~~lg~~~v~~~~~~~~------------------~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~  278 (383)
                      +++ ++.++++++|++.++++.+.++                  .+.+.+  ..++|++||++|+......  +++++  
T Consensus       252 ~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~--~~~l~--  327 (447)
T 4a0s_A          252 VSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLS--VIVAR--  327 (447)
T ss_dssp             ESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHH--HHHSC--
T ss_pred             eCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHH--HHHHh--
Confidence            854 5678889999999988655432                  344443  3579999999998654444  88999  


Q ss_pred             CCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceee
Q psy9949         279 KFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKY  358 (383)
Q Consensus       279 ~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  358 (383)
                      ++|+++.+|...       +.......  ..+..    +..     .+ .+......+++.++++++++|+++++++++|
T Consensus       328 ~~G~iv~~G~~~-------~~~~~~~~--~~~~~----~~~-----~i-~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  388 (447)
T 4a0s_A          328 RGGTVVTCGSSS-------GYLHTFDN--RYLWM----KLK-----KI-VGSHGANHEEQQATNRLFESGAVVPAMSAVY  388 (447)
T ss_dssp             TTCEEEESCCTT-------CSEEEEEH--HHHHH----TTC-----EE-EECCSCCHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             cCCEEEEEecCC-------CcccccCH--HHHHh----CCC-----EE-EecCCCCHHHHHHHHHHHHcCCcccceeEEE
Confidence            999999986431       10000000  01111    111     21 2333345678889999999999999999999


Q ss_pred             cCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         359 NFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       359 ~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +|+++++||+.+.+++..||+||.+
T Consensus       389 ~l~~~~~A~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          389 PLAEAAEACRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             EGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             cHHHHHHHHHHHhcCCCceEEEEEe
Confidence            9999999999999999999998864

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.1e-48  Score=361.65  Aligned_cols=312  Identities=18%  Similarity=0.208  Sum_probs=245.8

Q ss_pred             ccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          24 STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      +++|||+++.+++   .++++ +.|.|+|+++||||||.++|||++|++.+.+...      .       .....+|.++
T Consensus         2 ~~~mka~~~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~------~-------~~~~~~p~v~   64 (352)
T 1e3j_A            2 ASDNLSAVLYKQN---DLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRI------A-------DFIVKDPMVI   64 (352)
T ss_dssp             --CCEEEEEEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBS------S-------SCBCCSCEEC
T ss_pred             cccCEEEEEEcCC---cEEEE-EecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCC------c-------cccCCCCccc
Confidence            3579999999854   47888 8999999999999999999999999998874200      0       0123568999


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCC
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNIS  158 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~  158 (383)
                      |||++|+|+++|++|++|++||||++...                         ...+|+|+||+++|++.++++|++++
T Consensus        65 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~  144 (352)
T 1e3j_A           65 GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVS  144 (352)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSC
T ss_pred             cccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCC
Confidence            99999999999999999999999987521                         01369999999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeee
Q psy9949         159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVI  237 (383)
Q Consensus       159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~  237 (383)
                      +++||.+ .++.|||+++ +.+++    +++++|||+| +|++|++++|+|+.+|++|++++++ ++.++++++|++.++
T Consensus       145 ~~~aa~~-~~~~ta~~al-~~~~~----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~  217 (352)
T 1e3j_A          145 LEEGALL-EPLSVGVHAC-RRAGV----QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTL  217 (352)
T ss_dssp             HHHHHTH-HHHHHHHHHH-HHHTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred             HHHHHhh-chHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEE
Confidence            9999976 4778999999 47888    9999999999 5999999999999999999998855 567889999999999


Q ss_pred             eCCC-hHHHHHHhc------CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHH
Q psy9949         238 DYNE-PEAMHSIAG------AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDL  310 (383)
Q Consensus       238 ~~~~-~~~~~~i~~------~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (383)
                      ++++ .++.+++.+      ..++|++||++|+......+ +++++  ++|+++.+|....    ...+.    .  ..+
T Consensus       218 ~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~~----~~~~~----~--~~~  284 (352)
T 1e3j_A          218 VVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIG-INITR--TGGTLMLVGMGSQ----MVTVP----L--VNA  284 (352)
T ss_dssp             ECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHH-HHHSC--TTCEEEECSCCSS----CCCCC----H--HHH
T ss_pred             cCcccccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEecCCC----Ccccc----H--HHH
Confidence            9885 666666653      35799999999987543333 88999  9999999864210    00010    0  111


Q ss_pred             hhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCC-CCCeEEEeC
Q psy9949         311 LKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGH-LRGKIILNA  383 (383)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~-~~gkvvl~~  383 (383)
                      ..    +++.+.+.      .. ..++++++++++++|++  +++++++|||+++++||+.+.+++ ..||+||++
T Consensus       285 ~~----~~~~i~g~------~~-~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          285 CA----REIDIKSV------FR-YCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             HT----TTCEEEEC------CS-CSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             Hh----cCcEEEEe------cc-chHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEec
Confidence            11    12222221      11 24568999999999986  467789999999999999999887 689999974

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.3e-48  Score=364.63  Aligned_cols=314  Identities=21%  Similarity=0.321  Sum_probs=232.1

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      .+|||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++.+.|..+              .....+|.++|
T Consensus         2 ~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--------------~~~~~~p~i~G   64 (344)
T 2h6e_A            2 VKSKAALLKKFSEP--LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEA--------------KQGFRLPIILG   64 (344)
T ss_dssp             EEEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCC--------------CTTCCSSEECC
T ss_pred             ceeEEEEEecCCCC--CeEE-EeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCc--------------ccCCCCCcccc
Confidence            36999999988743  7788 8999999999999999999999999999988511              00235789999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecC------------------------CCCCCceEEEeec-CcccccCCCCCCH
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQP------------------------HKQGSFSKLILAD-SALVHKKPSNISD  159 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~------------------------~~~g~~a~~~~v~-~~~~~~ip~~~~~  159 (383)
                      ||++|+|+++|++ ++|++||||+++...                        ..+|+|+||+++| ++.++++ +++++
T Consensus        65 ~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~  142 (344)
T 2h6e_A           65 HENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSP  142 (344)
T ss_dssp             CCEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCH
T ss_pred             ccceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCH
Confidence            9999999999999 999999999765310                        2369999999999 9999999 99999


Q ss_pred             HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecC-chHHHHHhcCCCee
Q psy9949         160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSG-DAKDLVTSLNPNLV  236 (383)
Q Consensus       160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~-~~~~~~~~lg~~~v  236 (383)
                      ++||+++++++|||+++.......... ++++|||+|+ |++|++++|+|+.+  |++|++++++ ++.++++++|++.+
T Consensus       143 ~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v  220 (344)
T 2h6e_A          143 VEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV  220 (344)
T ss_dssp             HHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEE
T ss_pred             HHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEE
Confidence            999999999999999997541000012 7899999996 99999999999999  9999999954 57789999999999


Q ss_pred             eeCCC-hHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949         237 IDYNE-PEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF  315 (383)
Q Consensus       237 ~~~~~-~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (383)
                      +++++ .++.+++.+..++|+|||++|++.....+ +++++  ++|+++.+|.+...    ..+.      ...+..   
T Consensus       221 i~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~~~----~~~~------~~~~~~---  284 (344)
T 2h6e_A          221 SEMKDAESLINKLTDGLGASIAIDLVGTEETTYNL-GKLLA--QEGAIILVGMEGKR----VSLE------AFDTAV---  284 (344)
T ss_dssp             ECHHHHHHHHHHHHTTCCEEEEEESSCCHHHHHHH-HHHEE--EEEEEEECCCCSSC----CCCC------HHHHHH---
T ss_pred             eccccchHHHHHhhcCCCccEEEECCCChHHHHHH-HHHhh--cCCEEEEeCCCCCC----cccC------HHHHhh---
Confidence            98876 66666666545899999999997443333 89999  99999998653210    0010      001111   


Q ss_pred             ccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         316 ESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                       ++..+.      +......++++++++++++|++++.+ ++|||+++++||+.+.+++..||+||++
T Consensus       285 -~~~~i~------g~~~~~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          285 -WNKKLL------GSNYGSLNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             -TTCEEE------ECCSCCHHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             -CCcEEE------EEecCCHHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence             122222      22234578999999999999999988 9999999999999999888889999974

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=4e-47  Score=356.56  Aligned_cols=317  Identities=23%  Similarity=0.274  Sum_probs=254.1

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|..+.... ..       .....+|.++|||
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~-~~-------~~~~~~p~i~G~e   69 (347)
T 1jvb_A            1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRI-VE-------DLGVKLPVTLGHE   69 (347)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEET-TT-------TTCCCSCEECCCE
T ss_pred             CeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCccccc-cc-------ccCCCCCcccccc
Confidence            799999988754  7888 89999999999999999999999999998874110000 00       0123578999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecC-cccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADS-ALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~-~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|+++++|++||||+++..                        ...+|+|+||+++|+ +.++++ +++++++
T Consensus        70 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~  148 (347)
T 1jvb_A           70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVE  148 (347)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHH
T ss_pred             ceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHH
Confidence            99999999999999999999976421                        124699999999999 999999 9999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chHHHHHhcCCCeeeeC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAKDLVTSLNPNLVIDY  239 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~~~~~~lg~~~v~~~  239 (383)
                      ||+++++++|||+++. .+++    +++++|+|+|++|++|++++|+++.. |++|++++++ ++.+.++++|++.++++
T Consensus       149 aa~l~~~~~ta~~~l~-~~~~----~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~  223 (347)
T 1jvb_A          149 AAPLTCSGITTYRAVR-KASL----DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA  223 (347)
T ss_dssp             HGGGGTHHHHHHHHHH-HTTC----CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             cccchhhHHHHHHHHH-hcCC----CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecC
Confidence            9999999999999997 5788    99999999998779999999999999 9999999855 56788889999999998


Q ss_pred             CChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhc
Q psy9949         240 NEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFE  316 (383)
Q Consensus       240 ~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (383)
                      .+.++.+.+.+.   +++|++||++|+......+ +++++  ++|+++.+|.+....    .+    .  ...+...   
T Consensus       224 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~~~~----~~----~--~~~~~~~---  287 (347)
T 1jvb_A          224 SMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVY-PKALA--KQGKYVMVGLFGADL----HY----H--APLITLS---  287 (347)
T ss_dssp             TTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTG-GGGEE--EEEEEEECCSSCCCC----CC----C--HHHHHHH---
T ss_pred             CCccHHHHHHHHhcCCCceEEEECCCCHHHHHHH-HHHHh--cCCEEEEECCCCCCC----CC----C--HHHHHhC---
Confidence            887775555432   4799999999987443443 89999  999999986532000    00    0  0111111   


Q ss_pred             cccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         317 SGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                       +..+.      +......++++++++++++|++++.++++|||+++++||+.+.+++..||+||++
T Consensus       288 -~~~i~------g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          288 -EIQFV------GSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             -TCEEE------ECCSCCHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             -ceEEE------EEeccCHHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence             22222      2223457899999999999999999989999999999999999998889999975

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-47  Score=364.28  Aligned_cols=316  Identities=19%  Similarity=0.277  Sum_probs=253.3

Q ss_pred             CCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          20 HLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        20 ~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      ++.+-.+||++++.+++  +.++++ +.|.|+|+++||||||.++|||++|++++.|.                .....+
T Consensus        11 ~~~~~~~mka~~~~~~g--~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~----------------~~~~~~   71 (380)
T 1vj0_A           11 HHMMGLKAHAMVLEKFN--QPLVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGE----------------DPRVPL   71 (380)
T ss_dssp             ---CCEEEEEEEBCSTT--SCCEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTC----------------CTTCCS
T ss_pred             hhHhhhheEEEEEecCC--CCeEEE-EccCCCCCCCEEEEEEeEEeecccchHHhcCC----------------CCCCCC
Confidence            33445679999999988  347888 89999999999999999999999999999885                122457


Q ss_pred             CccccCceeEEEEecCCCCC------CCCCCCEEEEee-------------------------cC--------CCCCCce
Q psy9949         100 PLTLGRDFCGKIVAKGPRVT------DLNIDDVVYGVI-------------------------QP--------HKQGSFS  140 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~-------------------------~~--------~~~g~~a  140 (383)
                      |.++|||++|+|+++| +|+      +|++||||++..                         +.        ..+|+|+
T Consensus        72 P~v~GhE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~a  150 (380)
T 1vj0_A           72 PIILGHEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYS  150 (380)
T ss_dssp             SBCCCCEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSB
T ss_pred             CcccCcCcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCcccc
Confidence            8999999999999999 999      999999999741                         11        2369999


Q ss_pred             EEEee-cCcccccCCCCCCHH-HHHhhhHHHHHHHHHHHHhhh-cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EE
Q psy9949         141 KLILA-DSALVHKKPSNISDE-EAAGVLYTGLTAWSALQITAA-LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EV  216 (383)
Q Consensus       141 ~~~~v-~~~~~~~ip~~~~~~-~aa~l~~~~~tA~~~l~~~~~-~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~V  216 (383)
                      ||+++ |++.++++|++++++ +|+.++ +++|||+++. ..+ +    ++|++|||+| +|++|++++|+|+.+|+ +|
T Consensus       151 ey~~v~~~~~~~~iP~~l~~~~~Aa~~~-~~~ta~~al~-~~~~~----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~V  223 (380)
T 1vj0_A          151 SHIVLDPETDVLKVSEKDDLDVLAMAMC-SGATAYHAFD-EYPES----FAGKTVVIQG-AGPLGLFGVVIARSLGAENV  223 (380)
T ss_dssp             SEEEECTTCCEEEECTTSCHHHHHHHTT-HHHHHHHHHH-TCSSC----CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEE
T ss_pred             ceEEEcccceEEECCCCCChHHhHhhhc-HHHHHHHHHH-hcCCC----CCCCEEEEEC-cCHHHHHHHHHHHHcCCceE
Confidence            99999 999999999999999 666665 9999999995 677 7    9999999999 89999999999999995 99


Q ss_pred             EEEecC-chHHHHHhcCCCeeeeCC---ChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         217 VTTCSG-DAKDLVTSLNPNLVIDYN---EPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       217 i~~~~~-~~~~~~~~lg~~~v~~~~---~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ++++++ ++.++++++|++.+++++   +.++.+.+.+.   .++|+|||++|++.....+ +++++  ++|+++.+|..
T Consensus       224 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~  300 (380)
T 1vj0_A          224 IVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEG-SELLR--RGGFYSVAGVA  300 (380)
T ss_dssp             EEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHH-HHHEE--EEEEEEECCCC
T ss_pred             EEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHH-HHHHh--cCCEEEEEecC
Confidence            999954 577889999999999988   67777777653   3799999999986543333 89999  99999998653


Q ss_pred             CccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc--CCcccccceeecCCCHHHHH
Q psy9949         290 FLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER--GQIKPVIDSKYNFCELPTAF  367 (383)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~l~~~~~~~~~l~~~~~a~  367 (383)
                      ....         ..  .+++... +    ..++..+. +....+.++++++++++++  |+++++++++|||+++++||
T Consensus       301 ~~~~---------~~--~~~~~~~-~----~~~~~~i~-g~~~~~~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~  363 (380)
T 1vj0_A          301 VPQD---------PV--PFKVYEW-L----VLKNATFK-GIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKAL  363 (380)
T ss_dssp             SCCC---------CE--EECHHHH-T----TTTTCEEE-ECCCCCHHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHH
T ss_pred             CCCC---------Ce--eEchHHH-H----HhCCeEEE-EeecCCHHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHH
Confidence            2000         00  0111100 1    12222222 2223357899999999999  99988899999999999999


Q ss_pred             HHHhcCCCCCeEEEeC
Q psy9949         368 EKVQQGHLRGKIILNA  383 (383)
Q Consensus       368 ~~l~~~~~~gkvvl~~  383 (383)
                      +.+.+++.. |+||++
T Consensus       364 ~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          364 ELMESREAL-KVILYP  378 (380)
T ss_dssp             HHHHHTSCS-CEEEEC
T ss_pred             HHHhcCCCc-eEEEEe
Confidence            999988888 999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=4.7e-48  Score=365.20  Aligned_cols=312  Identities=17%  Similarity=0.149  Sum_probs=246.0

Q ss_pred             CcccceeeEEEeecCCCceeEeeccccCC--------CCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCC
Q psy9949          22 KYSTRTAAWQISSYGGADELQFNDNVKTP--------ILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSV   93 (383)
Q Consensus        22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p--------~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~   93 (383)
                      .+|++|||+++..++   .++++ +.|.|        +|+++||||||.++|||++|++++.+...      .       
T Consensus         4 ~~~~~mka~~~~~~~---~l~~~-~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~------~-------   66 (363)
T 3m6i_A            4 SASKTNIGVFTNPQH---DLWIS-EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI------G-------   66 (363)
T ss_dssp             -CCSCCEEEEECTTC---CEEEE-ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBS------S-------
T ss_pred             CCcccceeEEEeCCC---cEEEE-EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCC------C-------
Confidence            457889999999654   47888 89999        99999999999999999999998874310      0       


Q ss_pred             CCCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCc
Q psy9949          94 EPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSA  148 (383)
Q Consensus        94 ~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~  148 (383)
                      .....+|.++|||++|+|+++|++|++|++||||++...                         ...+|+|+||+++|.+
T Consensus        67 ~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~  146 (363)
T 3m6i_A           67 PMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAV  146 (363)
T ss_dssp             SCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGG
T ss_pred             CccCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehh
Confidence            122467899999999999999999999999999987421                         1246999999999999


Q ss_pred             ccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEec-CchHH
Q psy9949         149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCS-GDAKD  226 (383)
Q Consensus       149 ~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~-~~~~~  226 (383)
                      .++++|+ +++++||.+. ++.|||+++ +.+++    ++|++|||+|+ |++|++++|+||.+|++ |+++++ +++++
T Consensus       147 ~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~----~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  218 (363)
T 3m6i_A          147 WCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGV----RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLK  218 (363)
T ss_dssp             GEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTC----CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHH
T ss_pred             hEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCC----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            9999999 9999999884 778999999 58888    99999999995 99999999999999996 888884 45778


Q ss_pred             HHHhcCCCeeeeCC-----ChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCC
Q psy9949         227 LVTSLNPNLVIDYN-----EPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLG  298 (383)
Q Consensus       227 ~~~~lg~~~v~~~~-----~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~  298 (383)
                      +++++ ++.++++.     ..++.+++++.   .++|++||++|++.....+ +++++  ++|+++.+|.....    ..
T Consensus       219 ~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~~~----~~  290 (363)
T 3m6i_A          219 FAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAA-IWAVK--FGGKVFVIGVGKNE----IQ  290 (363)
T ss_dssp             HHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHH-HHHSC--TTCEEEECCCCCSC----CC
T ss_pred             HHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHH-HHHhc--CCCEEEEEccCCCC----cc
Confidence            99999 76666543     35677777653   4899999999998543333 89999  99999998642110    00


Q ss_pred             CchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcC-CC
Q psy9949         299 LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQG-HL  375 (383)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~-~~  375 (383)
                      +    ..  ..+...    ++.+.+.      .. ..++++++++++++|++  +++++++|||+++++||+.+.++ ..
T Consensus       291 ~----~~--~~~~~~----~~~i~g~------~~-~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~  353 (363)
T 3m6i_A          291 I----PF--MRASVR----EVDLQFQ------YR-YCNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTG  353 (363)
T ss_dssp             C----CH--HHHHHH----TCEEEEC------CS-CSSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGC
T ss_pred             c----cH--HHHHhc----CcEEEEc------cC-CHHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCC
Confidence            0    00  111111    2222221      11 25678999999999998  56788999999999999999987 56


Q ss_pred             CCeEEEeC
Q psy9949         376 RGKIILNA  383 (383)
Q Consensus       376 ~gkvvl~~  383 (383)
                      .+|+||++
T Consensus       354 ~~Kvvi~~  361 (363)
T 3m6i_A          354 AIKVQIQS  361 (363)
T ss_dssp             CSEEEEEC
T ss_pred             eEEEEEec
Confidence            78999974

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4e-47  Score=358.24  Aligned_cols=326  Identities=21%  Similarity=0.301  Sum_probs=256.3

Q ss_pred             CCcccceeeEEEeecCCC--ceeEe-eccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGA--DELQF-NDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVL   97 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~--~~l~~-~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~   97 (383)
                      +.+|.+|||+++.+++.+  +.+++ + +.|.|+|+++||||||.++|||++|++++.|..+               ...
T Consensus        18 ~~~~~~MkA~~~~~~g~~~~~~l~~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---------------~~~   81 (362)
T 2c0c_A           18 LYFQSMMQKLVVTRLSPNFREAVTLSR-DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYD---------------PSV   81 (362)
T ss_dssp             HHHCCEEEEEEECSCCSSHHHHEEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTC---------------TTC
T ss_pred             ccchhhceEEEEeecCCCccceeEEEe-ecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCC---------------CCC
Confidence            446788999999998863  46888 8 8999999999999999999999999999988511               124


Q ss_pred             CCCccccCceeEEEEecCCCCC-CCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHH
Q psy9949          98 EFPLTLGRDFCGKIVAKGPRVT-DLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSAL  176 (383)
Q Consensus        98 ~~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l  176 (383)
                      .+|.++|||++|+|+++|++|+ +|++||||+++.    +|+|+||+++|++.++++|+. + .++|+++.+++|||+++
T Consensus        82 ~~P~i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~~----~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al  155 (362)
T 2c0c_A           82 KPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMA----PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISL  155 (362)
T ss_dssp             CSCEECCSEEEEEEEEECTTGGGTCCTTCEEEEEC----SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHH
T ss_pred             CCCCCCCceeEEEEEEECCCccCCCCCCCEEEEcc----CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHH
Confidence            5789999999999999999999 999999999885    499999999999999999996 4 46778888999999999


Q ss_pred             HHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcC--CC
Q psy9949         177 QITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGA--GP  253 (383)
Q Consensus       177 ~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~--~g  253 (383)
                      .+.+++    +++++|||+||+|++|++++|+|+..|++|++++++ ++.++++++|++.++++++.++.+.+.+.  .+
T Consensus       156 ~~~~~~----~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g  231 (362)
T 2c0c_A          156 KELGGL----SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEG  231 (362)
T ss_dssp             HHHTCC----CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTC
T ss_pred             HHhcCC----CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCC
Confidence            878888    999999999999999999999999999999999966 46788899999999999887777776543  47


Q ss_pred             ccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCC-C-CCchhhhhhHHHHhhhhhccccccCCccEEEEEE
Q psy9949         254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDS-L-GLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF  331 (383)
Q Consensus       254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (383)
                      +|++|||+|+......  +++++  ++|+++.++......... . .+.....  ...+...    +..+.|.... ...
T Consensus       232 ~D~vid~~g~~~~~~~--~~~l~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~i~g~~~~-~~~  300 (362)
T 2c0c_A          232 VDVVYESVGGAMFDLA--VDALA--TKGRLIVIGFISGYQTPTGLSPVKAGTL--PAKLLKK----SASVQGFFLN-HYL  300 (362)
T ss_dssp             EEEEEECSCTHHHHHH--HHHEE--EEEEEEECCCGGGTTSSSCCCCCCCTTH--HHHHHHH----TCEEEECCGG-GCG
T ss_pred             CCEEEECCCHHHHHHH--HHHHh--cCCEEEEEeCCCCcCccccccccccccc--HHHHHhh----cceEEEEEhh-hhh
Confidence            9999999998544444  89999  999999986532111000 0 0000000  0111111    2222221100 000


Q ss_pred             cCCHHHHHHHHHHHHcCCccccc--------ceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         332 MPIPYAVKEINKFIERGQIKPVI--------DSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       332 ~~~~~~~~~~~~l~~~g~l~~~~--------~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ....++++++++++++|++++.+        ++.++|+++++|++.+.+++..||+||++
T Consensus       301 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          301 SKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             GGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEc
Confidence            11357899999999999998754        36789999999999999888889999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.8e-47  Score=359.11  Aligned_cols=312  Identities=21%  Similarity=0.287  Sum_probs=248.1

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++||++++.+++.  .++++ +.|.|+|+++||||||.++|||++|++++.|..      +.       .....+|.++|
T Consensus         3 ~~mka~~~~~~g~--~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~------~~-------~~~~~~p~v~G   66 (348)
T 2d8a_A            3 EKMVAIMKTKPGY--GAELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNE------WA-------QSRIKPPQIMG   66 (348)
T ss_dssp             CEEEEEEECSSSS--SCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCT------TH-------HHHCCSSEECC
T ss_pred             CcceEEEEECCCC--CEEEE-ECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCC------CC-------cccCCCCCccC
Confidence            4699999998874  47888 899999999999999999999999999998830      00       00135789999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHH
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDE  160 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~  160 (383)
                      ||++|+|+++|++|++|++||||++...                        ...+|+|+||+++|++.++++|++++++
T Consensus        67 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  146 (348)
T 2d8a_A           67 HEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPE  146 (348)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHH
T ss_pred             ccceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHH
Confidence            9999999999999999999999987521                        1246999999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeee
Q psy9949         161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVID  238 (383)
Q Consensus       161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~  238 (383)
                      +||+++ ++.|||+++. .+++     ++++|||+|+ |++|++++|+|+.+|+ +|++++++ ++.++++++|++.+++
T Consensus       147 ~aa~~~-~~~ta~~~l~-~~~~-----~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~  218 (348)
T 2d8a_A          147 YATLQE-PLGNAVDTVL-AGPI-----SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVIN  218 (348)
T ss_dssp             HHTTHH-HHHHHHHHHT-TSCC-----TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred             HHHhhh-HHHHHHHHHH-hcCC-----CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEC
Confidence            999885 7789999993 4432     7899999997 9999999999999999 99999955 5678889999999999


Q ss_pred             CCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhh
Q psy9949         239 YNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNF  315 (383)
Q Consensus       239 ~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (383)
                      +++.++.+++.+.   .++|++||++|.......+ +++++  ++|+++.++.....    ..+         ++. ..+
T Consensus       219 ~~~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~~~----~~~---------~~~-~~~  281 (348)
T 2d8a_A          219 PFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQG-LQAVT--PAGRVSLLGLYPGK----VTI---------DFN-NLI  281 (348)
T ss_dssp             TTTSCHHHHHHHHTTTSCEEEEEECSCCHHHHHHH-HHHEE--EEEEEEECCCCSSC----CCC---------CHH-HHT
T ss_pred             CCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEccCCCC----ccc---------Cch-HHH
Confidence            9887887777653   3799999999985543333 88999  99999998653110    001         110 001


Q ss_pred             ccccccCCccEEEEEEcCC-HHHHHHHHHHHHcCCc--ccccceeec-CCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         316 ESGELCKTNTIRWGFFMPI-PYAVKEINKFIERGQI--KPVIDSKYN-FCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~l--~~~~~~~~~-l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                          ..++..+. +..... .++++++++++++|++  +++++++|| |+++++||+.+.+ +..||+||++
T Consensus       282 ----~~~~~~i~-g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          282 ----IFKALTIY-GITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             ----TTTTCEEE-ECCCCCSHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             ----HhCCcEEE-EecCCCcHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEee
Confidence                12222222 222223 7889999999999995  667889999 9999999999977 5679999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=5.4e-47  Score=357.88  Aligned_cols=308  Identities=21%  Similarity=0.295  Sum_probs=244.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||+..+...+.+..++++ ++|.|+|+++||||||.++|||++|++.+.|..                ....+|.++|||
T Consensus        15 mk~~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~~~~~P~v~GhE   77 (366)
T 1yqd_A           15 VKAFGWAARDQSGHLSPF-NFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDW----------------GFSMYPLVPGHE   77 (366)
T ss_dssp             EEEEEEEECSTTCCEEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHHTSS----------------SCCCSSBCCCCC
T ss_pred             eeEEEEEEcCCCCCcEEE-EccCCCCCCCeEEEEEEEEeechhhHHHHcCCC----------------CCCCCCEecccc
Confidence            445555555555668888 899999999999999999999999999998751                124578999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEe-----ec---------------------------CCCCCCceEEEeecCcccccCC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGV-----IQ---------------------------PHKQGSFSKLILADSALVHKKP  154 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~-----~~---------------------------~~~~g~~a~~~~v~~~~~~~ip  154 (383)
                      ++|+|+++|++|++|++||||++.     |+                           ...+|+|+||+++|.+.++++|
T Consensus        78 ~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P  157 (366)
T 1yqd_A           78 IVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFP  157 (366)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECC
T ss_pred             eEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECC
Confidence            999999999999999999999752     10                           1146999999999999999999


Q ss_pred             CCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH-hc
Q psy9949         155 SNISDEEAAGVLYTGLTAWSALQITAALGLVYP-RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT-SL  231 (383)
Q Consensus       155 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~-~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~-~l  231 (383)
                      +++++++||+++++++|||+++. ..++    + ++++|||+| +|++|++++|+|+.+|++|++++++ ++.+.++ ++
T Consensus       158 ~~ls~~~aa~l~~~~~ta~~al~-~~~~----~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l  231 (366)
T 1yqd_A          158 DNMPLDGGAPLLCAGITVYSPLK-YFGL----DEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF  231 (366)
T ss_dssp             TTSCTTTTGGGGTHHHHHHHHHH-HTTC----CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHH-hcCc----CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            99999999999999999999997 4566    7 999999999 6999999999999999999999954 5667766 89


Q ss_pred             CCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHh
Q psy9949         232 NPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL  311 (383)
Q Consensus       232 g~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (383)
                      |++.++++++.+....+.  +++|+|||++|+......+ +++++  ++|+++.++....      .  ...  ....+.
T Consensus       232 Ga~~v~~~~~~~~~~~~~--~~~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~~------~--~~~--~~~~~~  296 (366)
T 1yqd_A          232 GADSFLVSRDQEQMQAAA--GTLDGIIDTVSAVHPLLPL-FGLLK--SHGKLILVGAPEK------P--LEL--PAFSLI  296 (366)
T ss_dssp             CCSEEEETTCHHHHHHTT--TCEEEEEECCSSCCCSHHH-HHHEE--EEEEEEECCCCSS------C--EEE--CHHHHH
T ss_pred             CCceEEeccCHHHHHHhh--CCCCEEEECCCcHHHHHHH-HHHHh--cCCEEEEEccCCC------C--CCc--CHHHHH
Confidence            999999988754333322  4899999999987543333 88999  9999999864310      0  000  001111


Q ss_pred             hhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         312 KSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                               .++..+ .+......+++.++++++++|++++.+ ++|||+++++||+.+.+++..||+||++
T Consensus       297 ---------~~~~~i-~g~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          297 ---------AGRKIV-AGSGIGGMKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             ---------TTTCEE-EECCSCCHHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             ---------hCCcEE-EEecCCCHHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence                     122222 122234578899999999999998876 6999999999999999998889999863

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=7.7e-49  Score=365.87  Aligned_cols=321  Identities=21%  Similarity=0.225  Sum_probs=246.9

Q ss_pred             cccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          23 YSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      ||++|||+++.+++.+..++++ +.|.|+|+++||||||.++|||++|++.+.|..+               ....+|.+
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~i   64 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN---------------IVREYPLI   64 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT---------------TCSSCSEE
T ss_pred             CCCcceEEEEecCCCCcceeEe-ecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCC---------------CcCCCCcc
Confidence            3568999999998866678898 8999999999999999999999999999887521               12357899


Q ss_pred             ccCceeEEEEecCCCCCCCCCCCEEEEee---cCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH-
Q psy9949         103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVI---QPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI-  178 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~---~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~-  178 (383)
                      +|||++|+|+++  ++++|++||||++..   +...+|+|+||+++|++.++++|+++++++||+++++++|||+++.. 
T Consensus        65 ~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~  142 (330)
T 1tt7_A           65 LGIDAAGTVVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRL  142 (330)
T ss_dssp             CCSEEEEEEEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEEEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHH
Confidence            999999999996  467899999999863   22246999999999999999999999999999999999999988763 


Q ss_pred             -hhhcCccCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc--CCC
Q psy9949         179 -TAALGLVYPRDK-RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGP  253 (383)
Q Consensus       179 -~~~~~~~~~~~~-~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g  253 (383)
                       ..++    ++++ +|||+|++|++|++++|+|+.+|++|++++++ ++.++++++|++.++++++.+ .+.+.+  ..+
T Consensus       143 ~~~~~----~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~~~~~~  217 (330)
T 1tt7_A          143 EQNGL----SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKALSKQQ  217 (330)
T ss_dssp             HHTTC----CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCSSCCCC
T ss_pred             HhcCc----CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHHhhcCC
Confidence             3556    8886 99999988999999999999999999999954 677889999999998865322 111222  247


Q ss_pred             ccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcC
Q psy9949         254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP  333 (383)
Q Consensus       254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (383)
                      +|++|||+|++.....  +++++  ++|+++.+|......     .  ...  ...+..    ++..+.|..........
T Consensus       218 ~d~vid~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~-----~--~~~--~~~~~~----~~~~i~g~~~~~~~~~~  280 (330)
T 1tt7_A          218 WQGAVDPVGGKQLASL--LSKIQ--YGGSVAVSGLTGGGE-----V--PAT--VYPFIL----RGVSLLGIDSVYCPMDV  280 (330)
T ss_dssp             EEEEEESCCTHHHHHH--HTTEE--EEEEEEECCCSSCSC-----E--EEC--SHHHHT----SCCEEEECCSSSCCHHH
T ss_pred             ccEEEECCcHHHHHHH--HHhhc--CCCEEEEEecCCCCc-----c--Ccc--hHHHHh----cCeEEEEEeccccCHHH
Confidence            9999999998654444  89999  999999986431000     0  000  001111    12222221100000000


Q ss_pred             CHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         334 IPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       334 ~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ..+.++++.+++++|+++++++++|||+++++||+.+.+++..||+||++
T Consensus       281 ~~~~~~~~~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          281 RAAVWERMSSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHHHHHTTTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHHHHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            13456777778888999988889999999999999999888899999975

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3e-47  Score=358.60  Aligned_cols=310  Identities=19%  Similarity=0.231  Sum_probs=246.3

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||+++.+++   .++++ +.|.|+|+++||||||.++|||++|++++.|...      .       .....+|.++|
T Consensus         6 ~~mka~~~~~~~---~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~-------~~~~~~p~v~G   68 (356)
T 1pl8_A            6 PNNLSLVVHGPG---DLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRI------G-------NFIVKKPMVLG   68 (356)
T ss_dssp             CCCEEEEEEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEE------T-------TEECSSCEECC
T ss_pred             cCceEEEEecCC---cEEEE-EccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCC------C-------CccCCCCcccc
Confidence            469999999854   47888 8999999999999999999999999998874310      0       01135689999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCH
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISD  159 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~  159 (383)
                      ||++|+|+++|++|++|++||||++...                         ...+|+|+||+++|.+.++++|+++++
T Consensus        69 ~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~  148 (356)
T 1pl8_A           69 HEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTF  148 (356)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCH
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCH
Confidence            9999999999999999999999987511                         023699999999999999999999999


Q ss_pred             HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeee
Q psy9949         160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVI  237 (383)
Q Consensus       160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~  237 (383)
                      ++||.+ .++.|||+++ +.+++    ++|++|||+| +|++|++++|+|+.+|+ +|++++++ ++.++++++|++.++
T Consensus       149 ~~aa~~-~~~~ta~~al-~~~~~----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  221 (356)
T 1pl8_A          149 EEGALI-EPLSVGIHAC-RRGGV----TLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVL  221 (356)
T ss_dssp             HHHHHH-HHHHHHHHHH-HHHTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred             HHHHhh-chHHHHHHHH-HhcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence            999876 5778999999 47888    9999999999 69999999999999999 99999855 567899999999999


Q ss_pred             eCC---ChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949         238 DYN---EPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK  312 (383)
Q Consensus       238 ~~~---~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (383)
                      +++   ..++.+++.+.  .++|+|||++|++.....+ +++++  ++|+++.+|...  .  ...+.    .  ..+..
T Consensus       222 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~--~--~~~~~----~--~~~~~  288 (356)
T 1pl8_A          222 QISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG-IYATR--SGGTLVLVGLGS--E--MTTVP----L--LHAAI  288 (356)
T ss_dssp             ECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHH-HHHSC--TTCEEEECSCCC--S--CCCCC----H--HHHHH
T ss_pred             cCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHH-HHHhc--CCCEEEEEecCC--C--CCccC----H--HHHHh
Confidence            988   36666666543  5899999999987543333 89999  999999986421  0  00110    0  11111


Q ss_pred             hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                          +++.+.+.      .. ..++++++++++++|++  +++++++|||+++++||+.+.++ ..||+||++
T Consensus       289 ----~~~~i~g~------~~-~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          289 ----REVDIKGV------FR-YCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             ----TTCEEEEC------CS-CSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             ----cceEEEEe------cc-cHHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeC
Confidence                12222221      11 24568999999999986  46778999999999999999888 789999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.3e-47  Score=359.37  Aligned_cols=310  Identities=18%  Similarity=0.217  Sum_probs=246.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++++  ++++ +.|.|+|+++||||||.++|||++|++++.|..+..             ....+|.++|||
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-------------~~~~~p~v~G~E   64 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWAR-------------GRIRPPLVTGHE   64 (343)
T ss_dssp             CEEEEECSSSSS--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHH-------------HHCCSSEECCCE
T ss_pred             CeEEEEeCCCCc--EEEE-eccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCcc-------------ccCCCCCcCCcc
Confidence            799999998865  7888 899999999999999999999999999998851100             013578999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee------------------------cCCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI------------------------QPHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++|++|++||||++..                        +...+|+|+||+++|.+.++++|+++++++|
T Consensus        65 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  144 (343)
T 2dq4_A           65 FSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVA  144 (343)
T ss_dssp             EEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHH
T ss_pred             ceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHH
Confidence            9999999999999999999999742                        1224699999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeeeeCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVIDYN  240 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~~~~  240 (383)
                      |++. ++.|||+++.+.+++     ++++|||+|+ |++|++++|+|+.+|+ +|++++++ ++.++++++ ++.+++++
T Consensus       145 a~~~-~~~ta~~~l~~~~~~-----~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~  216 (343)
T 2dq4_A          145 AILE-PFGNAVHTVYAGSGV-----SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPL  216 (343)
T ss_dssp             TTHH-HHHHHHHHHHSTTCC-----TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTT
T ss_pred             Hhhh-HHHHHHHHHHHhCCC-----CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcC
Confidence            9884 667999999644442     7899999997 9999999999999999 99999965 567888899 99999998


Q ss_pred             ChHHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccc
Q psy9949         241 EPEAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESG  318 (383)
Q Consensus       241 ~~~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (383)
                      +.++.+.+++  ..++|++||++|+......+ +++++  ++|+++.+|...           +..  .+++. ..    
T Consensus       217 ~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~-----------~~~--~~~~~-~~----  275 (343)
T 2dq4_A          217 EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQG-LMALI--PGGEARILGIPS-----------DPI--RFDLA-GE----  275 (343)
T ss_dssp             TSCHHHHHHHHHSSCEEEEEECSCCHHHHHHH-HHHEE--EEEEEEECCCCS-----------SCE--EECHH-HH----
T ss_pred             ccCHHHHHHHhcCCCCCEEEECCCCHHHHHHH-HHHHh--cCCEEEEEecCC-----------CCc--eeCcH-HH----
Confidence            8777776654  35899999999985443333 89999  999999986421           000  01110 00    


Q ss_pred             cccCCccEEEEEEcC-CHHHHHHHHHHHHcCCc--ccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         319 ELCKTNTIRWGFFMP-IPYAVKEINKFIERGQI--KPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       319 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~l--~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +..++..+. +.... ..++++++++++++|++  +++++++|||+++++|++.+.+++. ||+||++
T Consensus       276 ~~~~~~~i~-g~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          276 LVMRGITAF-GIAGRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             TGGGTCEEE-ECCSCCTTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEET
T ss_pred             HHhCceEEE-EeecCCCHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEee
Confidence            111222221 22222 46789999999999994  6778899999999999999998887 9999974

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.1e-46  Score=352.25  Aligned_cols=317  Identities=18%  Similarity=0.244  Sum_probs=249.7

Q ss_pred             cceeeEEEee--cC--CCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          25 TRTAAWQISS--YG--GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        25 ~~~~a~~~~~--~g--~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      ++||+|++.+  +|  .++.++++ +.|.|+|++|||||||.++|||++|+..+.+..                 ...+|
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~-----------------~~~~p   67 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFV-ETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR-----------------SYIPP   67 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHHSCSC-----------------CSSCC
T ss_pred             ccccEEEEEecCCCCCCCCceEEE-eccCCCCCCCEEEEEEEEEEeCHHHHhhhhccc-----------------ccCCC
Confidence            5799999986  33  45779999 899999999999999999999999998887641                 13446


Q ss_pred             ccccCc----eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHH--HhhhHHHHHHHH
Q psy9949         101 LTLGRD----FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEA--AGVLYTGLTAWS  174 (383)
Q Consensus       101 ~~~G~e----~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a--a~l~~~~~tA~~  174 (383)
                      .++|||    ++|+|++  +++++|++||||++.      |+|+||+++|.+.++++|+++++.++  ++++++++|||+
T Consensus        68 ~~~G~e~g~~~~G~V~~--~~v~~~~vGdrV~~~------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~  139 (336)
T 4b7c_A           68 VGIGEVMRALGVGKVLV--SKHPGFQAGDYVNGA------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYF  139 (336)
T ss_dssp             CCTTSBCCCEEEEEEEE--ECSTTCCTTCEEEEE------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHH
T ss_pred             CCCCcccCCceEEEEEe--cCCCCCCCCCEEecc------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHH
Confidence            677777    7999999  458899999999975      89999999999999999999987776  788999999999


Q ss_pred             HHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH-HhcCCCeeeeCCChHHHHHHhcC-
Q psy9949         175 ALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV-TSLNPNLVIDYNEPEAMHSIAGA-  251 (383)
Q Consensus       175 ~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~-~~lg~~~v~~~~~~~~~~~i~~~-  251 (383)
                      ++.+.+++    +++++|||+|++|++|++++|+|+..|++|++++++ ++.+.+ +++|++.++|+++.++.+.+.+. 
T Consensus       140 al~~~~~~----~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  215 (336)
T 4b7c_A          140 ALLDVGQP----KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC  215 (336)
T ss_dssp             HHHHTTCC----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC
T ss_pred             HHHHhcCC----CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc
Confidence            99878888    999999999988999999999999999999999955 566777 89999999999988888777653 


Q ss_pred             -CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949         252 -GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF  330 (383)
Q Consensus       252 -~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (383)
                       +++|++||++|+......  +++++  ++|+++.+|........      ......+++... +.++..+.+.... ..
T Consensus       216 ~~~~d~vi~~~g~~~~~~~--~~~l~--~~G~iv~~G~~~~~~~~------~~~~~~~~~~~~-~~~~~~i~g~~~~-~~  283 (336)
T 4b7c_A          216 PKGIDVFFDNVGGEILDTV--LTRIA--FKARIVLCGAISQYNNK------EAVRGPANYLSL-LVNRARMEGMVVM-DY  283 (336)
T ss_dssp             TTCEEEEEESSCHHHHHHH--HTTEE--EEEEEEECCCGGGGC------------CCTTTTHH-HHTTCEEEECCGG-GG
T ss_pred             CCCceEEEECCCcchHHHH--HHHHh--hCCEEEEEeecccccCC------cccccchhHHHH-HhCCcEEEEEEhh-hh
Confidence             479999999998654444  89999  99999998643210000      000000010000 0112222221100 00


Q ss_pred             EcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         331 FMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       331 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .....+.++++++++++|++++.+..+++++++++||+.+.+++..||+||+|
T Consensus       284 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          284 AQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            00124789999999999999998877899999999999999999999999986

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.7e-47  Score=352.98  Aligned_cols=317  Identities=18%  Similarity=0.197  Sum_probs=240.8

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++||++++.+++.+..++++ +.|.|+|+++||+|||.++|||++|++.+.|..+               ....+|.++|
T Consensus         2 ~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~v~G   65 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK---------------IVKTYPFVPG   65 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS---------------SCCSSSBCCC
T ss_pred             CcceEEEEecCCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCC---------------CCCCCCcccC
Confidence            36999999999876678898 8999999999999999999999999999887511               1235789999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEee---cCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH--h
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVI---QPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI--T  179 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~---~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~--~  179 (383)
                      ||++|+|+++  ++++|++||||++..   +...+|+|+||+++|++.++++|+++++++||+++++++|||.++..  .
T Consensus        66 ~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~  143 (328)
T 1xa0_A           66 IDLAGVVVSS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEE  143 (328)
T ss_dssp             SEEEEEEEEC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhh
Confidence            9999999995  568899999999763   12236999999999999999999999999999999999999988763  3


Q ss_pred             hhcCccCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhc--CCCcc
Q psy9949         180 AALGLVYPRDK-RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAG--AGPYD  255 (383)
Q Consensus       180 ~~~~~~~~~~~-~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~--~~g~d  255 (383)
                      .++    ++++ +|||+|++|++|++++|+|+.+|++|++++++ ++.++++++|++.++++++.+ .+.+.+  .+++|
T Consensus       144 ~~~----~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~~~~~~~d  218 (328)
T 1xa0_A          144 HGL----TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRPLDKQRWA  218 (328)
T ss_dssp             TTC----CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------CCSCCEE
T ss_pred             cCC----CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-HHHHHHhcCCccc
Confidence            556    8886 99999988999999999999999999999965 677889999999999987643 233332  24799


Q ss_pred             EEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCH
Q psy9949         256 VILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIP  335 (383)
Q Consensus       256 ~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (383)
                      ++||++|+......  +++++  ++|+++.+|......   ..+  ..    ..+...    +..+.|............
T Consensus       219 ~vid~~g~~~~~~~--~~~l~--~~G~~v~~G~~~~~~---~~~--~~----~~~~~~----~~~i~g~~~~~~~~~~~~  281 (328)
T 1xa0_A          219 AAVDPVGGRTLATV--LSRMR--YGGAVAVSGLTGGAE---VPT--TV----HPFILR----GVSLLGIDSVYCPMDLRL  281 (328)
T ss_dssp             EEEECSTTTTHHHH--HHTEE--EEEEEEECSCCSSSC---CCC--CS----HHHHHT----TCEEEECCSSSCCHHHHH
T ss_pred             EEEECCcHHHHHHH--HHhhc--cCCEEEEEeecCCCC---CCC--ch----hhhhhc----CceEEEEecccCCHHHHH
Confidence            99999998654444  89999  999999986532100   000  00    011111    222222100000000013


Q ss_pred             HHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         336 YAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       336 ~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +.++++.++++++ +++. +++|+|+++++||+.+.+++..||+||++
T Consensus       282 ~~~~~~~~~~~~g-l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          282 RIWERLAGDLKPD-LERI-AQEISLAELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             HHHHHHHTTTCCC-HHHH-EEEEEGGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHcC-Ccee-eeEeCHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            4567777777777 7664 68999999999999999888889999975

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=7.9e-47  Score=361.40  Aligned_cols=314  Identities=18%  Similarity=0.247  Sum_probs=240.1

Q ss_pred             ccceeeEEEeecCCCceeEeeccccCCC-CCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          24 STRTAAWQISSYGGADELQFNDNVKTPI-LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        24 ~~~~~a~~~~~~g~~~~l~~~~~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      |.+|++.++..++   .++++ ++|.|+ |+++||||||.++|||++|++++.|.....         ..+.....+|.+
T Consensus        28 ~~~m~a~~~~~~~---~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---------~~~~~~~~~P~i   94 (404)
T 3ip1_A           28 KLTWLGSKVWRYP---EVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGY---------ILYPGLTGFPVT   94 (404)
T ss_dssp             TBBSCGGGTEEEE---EEEEE-EECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSB---------BSCCSCBCSSEE
T ss_pred             hhhcceEEEEeCC---ceEEE-EcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCcc---------ccccccCCCCcc
Confidence            3344444444332   58898 899999 999999999999999999999988741100         001123467999


Q ss_pred             ccCceeEEEEecCCCC------CCCCCCCEEEEee------------------------cCCCCCCceEEEeecCccccc
Q psy9949         103 LGRDFCGKIVAKGPRV------TDLNIDDVVYGVI------------------------QPHKQGSFSKLILADSALVHK  152 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v------~~~~~Gd~V~~~~------------------------~~~~~g~~a~~~~v~~~~~~~  152 (383)
                      +|||++|+|+++|++|      ++|++||||++..                        +...+|+|+||+++|.+.+++
T Consensus        95 ~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~  174 (404)
T 3ip1_A           95 LGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWS  174 (404)
T ss_dssp             CCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEE
T ss_pred             cCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEe
Confidence            9999999999999999      8899999999742                        123469999999999999999


Q ss_pred             CCCCCC------HHHHHhhhHHHHHHHHHHHHh-hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEec-Cc
Q psy9949         153 KPSNIS------DEEAAGVLYTGLTAWSALQIT-AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCS-GD  223 (383)
Q Consensus       153 ip~~~~------~~~aa~l~~~~~tA~~~l~~~-~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~-~~  223 (383)
                      +|++++      +.++|+++.+++|||+++... +++    ++|++|||+|+ |++|++++|+|+.+|+ +|+++++ ++
T Consensus       175 iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~----~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~  249 (404)
T 3ip1_A          175 LRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGI----RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEV  249 (404)
T ss_dssp             CGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCC----CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHH
T ss_pred             ccccccccccccchhHHhhhhHHHHHHHHHHHhccCC----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            999875      677899999999999999644 377    99999999995 9999999999999999 9999984 45


Q ss_pred             hHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCCCccccccccccc----ccCCCceEEEecCCCccCCCC
Q psy9949         224 AKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFL----KTGKFSKFVTLRSPFLKNTDS  296 (383)
Q Consensus       224 ~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l----~~~~~G~~v~~~~~~~~~~~~  296 (383)
                      ++++++++|++.++++++.++.+.+++.   .++|+||||+|++......+++++    +  ++|+++.+|...      
T Consensus       250 ~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~--~~G~iv~~G~~~------  321 (404)
T 3ip1_A          250 RRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARG--INATVAIVARAD------  321 (404)
T ss_dssp             HHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSC--CCCEEEECSCCC------
T ss_pred             HHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccC--CCcEEEEeCCCC------
Confidence            7789999999999999988888887753   379999999999832111115666    8  999999996531      


Q ss_pred             CCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc-CCHHHHHHHHHHHHcCCcc--cccceeecCCCHHHHHHHHhcC
Q psy9949         297 LGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM-PIPYAVKEINKFIERGQIK--PVIDSKYNFCELPTAFEKVQQG  373 (383)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~l~--~~~~~~~~l~~~~~a~~~l~~~  373 (383)
                           +..  .+++..  +    ..++..+. +... ...++++++++++++| ++  ++++++|+|+++++||+.+.  
T Consensus       322 -----~~~--~~~~~~--~----~~~~~~i~-g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~--  384 (404)
T 3ip1_A          322 -----AKI--PLTGEV--F----QVRRAQIV-GSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ--  384 (404)
T ss_dssp             -----SCE--EECHHH--H----HHTTCEEE-ECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT--
T ss_pred             -----CCC--cccHHH--H----hccceEEE-EecCCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh--
Confidence                 100  011111  1    11222222 2221 2367899999999999 64  57889999999999999987  


Q ss_pred             CCCCeEEEe
Q psy9949         374 HLRGKIILN  382 (383)
Q Consensus       374 ~~~gkvvl~  382 (383)
                        .||+||+
T Consensus       385 --~GKvvl~  391 (404)
T 3ip1_A          385 --TDKSLVK  391 (404)
T ss_dssp             --TCTTCSC
T ss_pred             --CCcEEEe
Confidence              4777765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=4.8e-47  Score=388.56  Aligned_cols=310  Identities=25%  Similarity=0.285  Sum_probs=256.6

Q ss_pred             ceeeEEEeecCCCceeEeecccc--CCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccc
Q psy9949          26 RTAAWQISSYGGADELQFNDNVK--TPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTL  103 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~--~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~  103 (383)
                      ..+.+.+.++|.++.|+++ +.+  .|+|++|||+|||.++|||++|+++..|.                   ...|.++
T Consensus       209 ~~~~l~~~~~G~~~~L~~~-~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~-------------------~~~~~~l  268 (795)
T 3slk_A          209 TGWRLEATRPGSLDGLALV-DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGM-------------------YPGVASL  268 (795)
T ss_dssp             SSCCEEESSTTSSTTEEEC-CCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTC-------------------CSSCCCS
T ss_pred             ceEEEecCCCCCccceEEE-eCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCC-------------------CCCCccc
Confidence            4567778889999999998 666  46789999999999999999999999886                   2235679


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcC
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG  183 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  183 (383)
                      |||++|+|+++|++|++|++||||+++.    +|+|+||++++.+.++++|+++++++||+++++++|||+++.+.+++ 
T Consensus       269 G~E~aG~V~~vG~~V~~~~vGDrV~~~~----~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l-  343 (795)
T 3slk_A          269 GSEGAGVVVETGPGVTGLAPGDRVMGMI----PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGL-  343 (795)
T ss_dssp             CCCEEEEEEEECSSCCSSCTTCEEEECC----SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCC-
T ss_pred             cceeEEEEEEeCCCCCcCCCCCEEEEEe----cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCC-
Confidence            9999999999999999999999999986    49999999999999999999999999999999999999999888898 


Q ss_pred             ccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEc
Q psy9949         184 LVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDA  260 (383)
Q Consensus       184 ~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~  260 (383)
                         ++|++|||+|++|++|++++|+||.+|++|++++++++.++++ +|+++++++++.++.+.+++.   .|+|+|||+
T Consensus       344 ---~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~  419 (795)
T 3slk_A          344 ---RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNS  419 (795)
T ss_dssp             ---CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEEC
T ss_pred             ---CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEEC
Confidence               9999999999999999999999999999999999777666555 999999999999999888753   489999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHH
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKE  340 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (383)
                      +|++.....  +++++  ++|+++.+|.....           ....+.....    ...+.+..+.........+.+++
T Consensus       420 ~gg~~~~~~--l~~l~--~~Gr~v~iG~~~~~-----------~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~l~~  480 (795)
T 3slk_A          420 LAGEFADAS--LRMLP--RGGRFLELGKTDVR-----------DPVEVADAHP----GVSYQAFDTVEAGPQRIGEMLHE  480 (795)
T ss_dssp             CCTTTTHHH--HTSCT--TCEEEEECCSTTCC-----------CHHHHHHHSS----SEEEEECCGGGGHHHHHHHHHHH
T ss_pred             CCcHHHHHH--HHHhc--CCCEEEEecccccc-----------CcccccccCC----CCEEEEeeccccCHHHHHHHHHH
Confidence            998776665  99999  99999999643211           0111111001    11111000000000012568999


Q ss_pred             HHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         341 INKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       341 ~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++++++|++++++.++||++++++||+.+.+++..||+||++
T Consensus       481 ~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          481 LVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             HHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             HHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEec
Confidence            9999999999999999999999999999999999999999975

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=3.6e-46  Score=356.24  Aligned_cols=319  Identities=16%  Similarity=0.176  Sum_probs=246.8

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCC-CC-----CeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPIL-KS-----KDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~-~~-----~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      +|||+++.+++   .++++ +.|.|+| ++     +||||||.++|||++|++++.|.                 ....+
T Consensus         2 ~MkA~~~~~~~---~l~~~-~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~-----------------~~~~~   60 (398)
T 2dph_A            2 GNKSVVYHGTR---DLRVE-TVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGR-----------------FIVPK   60 (398)
T ss_dssp             CEEEEEEEETT---EEEEE-EECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTS-----------------SCCCT
T ss_pred             ccEEEEEEcCC---CEEEE-EccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCC-----------------CCCCC
Confidence            59999999864   47888 8999987 68     99999999999999999999885                 12457


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEee----c-------------------------------CCCCCCceEEEe
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI----Q-------------------------------PHKQGSFSKLIL  144 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~----~-------------------------------~~~~g~~a~~~~  144 (383)
                      |.++|||++|+|+++|++|++|++||||++..    +                               ...+|+|+||++
T Consensus        61 p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~  140 (398)
T 2dph_A           61 GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVL  140 (398)
T ss_dssp             TCBCCCCEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEE
T ss_pred             CcccCCceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEE
Confidence            89999999999999999999999999998631    0                               013599999999


Q ss_pred             ecCc--ccccCCCCCCHHH----HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEE
Q psy9949         145 ADSA--LVHKKPSNISDEE----AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVV  217 (383)
Q Consensus       145 v~~~--~~~~ip~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi  217 (383)
                      +|.+  .++++|+++++++    ||+++++++|||+++. .+++    ++|++|||+| +|++|++++|+|+.+|+ +|+
T Consensus       141 v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi  214 (398)
T 2dph_A          141 VPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCV-SAGV----KPGSHVYIAG-AGPVGRCAAAGARLLGAACVI  214 (398)
T ss_dssp             ESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHHH-HTTC----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEE
T ss_pred             eccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHHH-HcCC----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEE
Confidence            9987  8999999999998    8999999999999994 7888    9999999999 59999999999999999 999


Q ss_pred             EEecC-chHHHHHhcCCCeeeeCCChHH-HHHHhc---CCCccEEEEcCCCCc--------------ccccccccccccC
Q psy9949         218 TTCSG-DAKDLVTSLNPNLVIDYNEPEA-MHSIAG---AGPYDVILDAAGIPL--------------DQINSYLPFLKTG  278 (383)
Q Consensus       218 ~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~i~~---~~g~d~v~d~~g~~~--------------~~~~~~~~~l~~~  278 (383)
                      +++++ +++++++++|++ ++++++.++ .+++.+   ..++|+|||++|+..              ....+ +++++  
T Consensus       215 ~~~~~~~~~~~a~~lGa~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~-~~~l~--  290 (398)
T 2dph_A          215 VGDQNPERLKLLSDAGFE-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSL-FDVVR--  290 (398)
T ss_dssp             EEESCHHHHHHHHTTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHH-HHHEE--
T ss_pred             EEcCCHHHHHHHHHcCCc-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHH-HHHHh--
Confidence            99955 567899999995 889887665 666654   237999999999863              22232 88999  


Q ss_pred             CCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc--c--cc
Q psy9949         279 KFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK--P--VI  354 (383)
Q Consensus       279 ~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~--~~  354 (383)
                      ++|+++.+|....................+++.. .+.+++.+.+.      .....++++++++++++|+++  +  ++
T Consensus       291 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~i~g~------~~~~~~~~~~~~~l~~~g~l~~~~~~~i  363 (398)
T 2dph_A          291 AGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGK-MWTKSIRIMTG------MAPVTNYNRHLTEAILWDQMPYLSKVMN  363 (398)
T ss_dssp             EEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHH-HHHTTCEEECS------SCCGGGTHHHHHHHHHTTCCHHHHHHHC
T ss_pred             cCCEEEEeccccccccccccccccCCcccccHHH-HhhcCCEEEEe------ccCcHHHHHHHHHHHHcCCCCccchhhE
Confidence            9999999865311000000000000000011100 01112222221      122467789999999999998  6  67


Q ss_pred             ceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         355 DSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       355 ~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++|+|+++++||+.+.+++. ||+||++
T Consensus       364 ~~~~~l~~~~~A~~~~~~~~~-gKvvv~~  391 (398)
T 2dph_A          364 IEVITLDQAPDGYAKFDKGSP-AKFVIDP  391 (398)
T ss_dssp             EEEECSTTHHHHHHHHHTTCS-CEEEECT
T ss_pred             EEEEcHHHHHHHHHHHhcCCc-eEEEEec
Confidence            899999999999999998888 9999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-45  Score=350.70  Aligned_cols=319  Identities=16%  Similarity=0.165  Sum_probs=245.0

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCC-CCe------EEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILK-SKD------VLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLE   98 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~-~~e------VlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~   98 (383)
                      +|||+++.+++   .++++ +.|.|+|+ ++|      |||||.++|||++|++++.|..                 ...
T Consensus         2 ~Mka~~~~~~~---~l~~~-~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~-----------------~~~   60 (398)
T 1kol_A            2 GNRGVVYLGSG---KVEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT-----------------TAQ   60 (398)
T ss_dssp             CEEEEEEEETT---EEEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS-----------------CCC
T ss_pred             ccEEEEEecCC---ceEEE-EecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCC-----------------CCC
Confidence            59999999765   47888 89999997 898      9999999999999999998851                 134


Q ss_pred             CCccccCceeEEEEecCCCCCCCCCCCEEEEee------------------------------cC----CCCCCceEEEe
Q psy9949          99 FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI------------------------------QP----HKQGSFSKLIL  144 (383)
Q Consensus        99 ~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------------~~----~~~g~~a~~~~  144 (383)
                      +|.++|||++|+|+++|++|++|++||||++..                              +.    ..+|+|+||++
T Consensus        61 ~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~  140 (398)
T 1kol_A           61 VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVL  140 (398)
T ss_dssp             TTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEE
T ss_pred             CCcccCcccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEE
Confidence            689999999999999999999999999998521                              11    13599999999


Q ss_pred             ecCc--ccccCCCCCCHHH----HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEE
Q psy9949         145 ADSA--LVHKKPSNISDEE----AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVV  217 (383)
Q Consensus       145 v~~~--~~~~ip~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi  217 (383)
                      +|.+  .++++|+++++++    ++++++++.|||+++. .+++    ++|++|||+| +|++|++++|+||.+|+ +|+
T Consensus       141 v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~----~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi  214 (398)
T 1kol_A          141 VPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGV----GPGSTVYVAG-AGPVGLAAAASARLLGAAVVI  214 (398)
T ss_dssp             ESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEE
T ss_pred             ecchhCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCC----CCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEE
Confidence            9987  8999999999988    7889999999999997 7888    9999999999 69999999999999999 799


Q ss_pred             EEecC-chHHHHHhcCCCeeeeCCChH-HHHHHhc---CCCccEEEEcCCCCc---------------cccccccccccc
Q psy9949         218 TTCSG-DAKDLVTSLNPNLVIDYNEPE-AMHSIAG---AGPYDVILDAAGIPL---------------DQINSYLPFLKT  277 (383)
Q Consensus       218 ~~~~~-~~~~~~~~lg~~~v~~~~~~~-~~~~i~~---~~g~d~v~d~~g~~~---------------~~~~~~~~~l~~  277 (383)
                      +++++ ++.++++++|++ ++++++.+ +.+.+++   ..++|+|||++|+..               ....+ +++++ 
T Consensus       215 ~~~~~~~~~~~a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~l~-  291 (398)
T 1kol_A          215 VGDLNPARLAHAKAQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSL-MQVTR-  291 (398)
T ss_dssp             EEESCHHHHHHHHHTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHH-HHHEE-
T ss_pred             EEcCCHHHHHHHHHcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHH-HHHHh-
Confidence            98854 577899999997 78887644 6666654   247999999999863               22232 88999 


Q ss_pred             CCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc---ccc
Q psy9949         278 GKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK---PVI  354 (383)
Q Consensus       278 ~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~---~~~  354 (383)
                       ++|+++.+|.+......  ..........+.+....    +..++..+. +......+.++++++++++|+++   +++
T Consensus       292 -~~G~iv~~G~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~-g~~~~~~~~~~~~~~l~~~g~l~~~~~~i  363 (398)
T 1kol_A          292 -VAGKIGIPGLYVTEDPG--AVDAAAKIGSLSIRFGL----GWAKSHSFH-TGQTPVMKYNRALMQAIMWDRINIAEVVG  363 (398)
T ss_dssp             -EEEEEEECSCCCSCCTT--CSSHHHHTTCCCCCHHH----HHHTTCEEE-ESSCCHHHHHHHHHHHHHTTSCCHHHHHT
T ss_pred             -cCCEEEEeccccCCccc--ccccccccccccccHHH----HhhcccEEE-ecccChHHHHHHHHHHHHcCCCCCcccee
Confidence             99999998753111000  00000000000000000    011222221 11122367789999999999998   467


Q ss_pred             ceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         355 DSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       355 ~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      +++|+|+++++||+.+.+++. ||+||++
T Consensus       364 ~~~~~l~~~~~A~~~~~~~~~-gKvvi~~  391 (398)
T 1kol_A          364 VQVISLDDAPRGYGEFDAGVP-KKFVIDP  391 (398)
T ss_dssp             EEEECGGGHHHHHHHHHHTCS-CEEEECT
T ss_pred             EEEEcHHHHHHHHHHHhCCCc-eEEEEEe
Confidence            899999999999999998887 9999974

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=4.5e-46  Score=350.67  Aligned_cols=305  Identities=17%  Similarity=0.154  Sum_probs=242.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC---Cccc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF---PLTL  103 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---p~~~  103 (383)
                      |||+++.+++.  .++++ +.|.|+|+++||||||.++|||++|++++.|..                +...+   |.++
T Consensus         1 MkA~~~~~~~~--~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~----------------~~~~~~~~p~v~   61 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGH----------------GGFPEGEDHLVL   61 (357)
T ss_dssp             CEEEEEETTCS--SCEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCS----------------TTSCTTCSEEEC
T ss_pred             CeEEEEeCCCC--ceEEE-ECCCCCCCcCEEEEEEeEEeechhcHHHHcCCC----------------CCCCCCCCCccc
Confidence            79999998776  37888 899999999999999999999999999998851                11345   8999


Q ss_pred             cCceeEEEEecCCCCCCCCCCCEEEEe------ec----------------------C-CCCCCceEEEeecCcccccCC
Q psy9949         104 GRDFCGKIVAKGPRVTDLNIDDVVYGV------IQ----------------------P-HKQGSFSKLILADSALVHKKP  154 (383)
Q Consensus       104 G~e~~G~Vv~vG~~v~~~~~Gd~V~~~------~~----------------------~-~~~g~~a~~~~v~~~~~~~ip  154 (383)
                      |||++| |+++|++ ++|++||||++.      |+                      . ..+|+|+||+++|++.++++|
T Consensus        62 G~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP  139 (357)
T 2b5w_A           62 GHEAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIP  139 (357)
T ss_dssp             CSEEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECC
T ss_pred             CceeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECC
Confidence            999999 9999999 999999999876      21                      1 235999999999999999999


Q ss_pred             CCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCC------CEEEEEcCCchHHHHH-HHHH-HHCCCE-EEEEecC-c-
Q psy9949         155 SNISDEEAAGVLYTGLTAWSALQITAALGLVYPRD------KRVLVLGASGGVGTMA-VQLL-KAWDIE-VVTTCSG-D-  223 (383)
Q Consensus       155 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~------~~VlI~ga~g~vG~~a-i~la-~~~G~~-Vi~~~~~-~-  223 (383)
                      ++++ + +|+++.+++|||+++. .+++    ++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++ + 
T Consensus       140 ~~~~-~-~aal~~~~~ta~~al~-~~~~----~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~  211 (357)
T 2b5w_A          140 RSQA-E-LGFLIEPISITEKALE-HAYA----SRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRP  211 (357)
T ss_dssp             GGGS-T-TGGGHHHHHHHHHHHH-HHHH----TTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSS
T ss_pred             CCcc-h-hhhhhchHHHHHHHHH-hcCC----CCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCccc
Confidence            9999 5 5567789999999994 7888    899      99999996 9999999 9999 999996 9999965 5 


Q ss_pred             --hHHHHHhcCCCeeeeCCChHHHHHHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCc
Q psy9949         224 --AKDLVTSLNPNLVIDYNEPEAMHSIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLV  300 (383)
Q Consensus       224 --~~~~~~~lg~~~v~~~~~~~~~~~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~  300 (383)
                        +.++++++|++++ ++++.++.+ +.+ .+++|+|||++|+......+ +++++  ++|+++.+|.....   ...+.
T Consensus       212 ~~~~~~~~~lGa~~v-~~~~~~~~~-i~~~~gg~Dvvid~~g~~~~~~~~-~~~l~--~~G~iv~~g~~~~~---~~~~~  283 (357)
T 2b5w_A          212 DPTIDIIEELDATYV-DSRQTPVED-VPDVYEQMDFIYEATGFPKHAIQS-VQALA--PNGVGALLGVPSDW---AFEVD  283 (357)
T ss_dssp             CHHHHHHHHTTCEEE-ETTTSCGGG-HHHHSCCEEEEEECSCCHHHHHHH-HHHEE--EEEEEEECCCCCCC---CCCCC
T ss_pred             HHHHHHHHHcCCccc-CCCccCHHH-HHHhCCCCCEEEECCCChHHHHHH-HHHHh--cCCEEEEEeCCCCC---Cceec
Confidence              6789999999999 988777666 543 23899999999987443333 89999  99999999753210   00111


Q ss_pred             hhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcC--C-cccccceeecCCCHHHHHHHHhcCCCCC
Q psy9949         301 PGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG--Q-IKPVIDSKYNFCELPTAFEKVQQGHLRG  377 (383)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~-l~~~~~~~~~l~~~~~a~~~l~~~~~~g  377 (383)
                      .      ..+....+.++..+.      +......++++++++++++|  + ++++++++|+|+++++||+.+   +..|
T Consensus       284 ~------~~~~~~~~~~~~~i~------g~~~~~~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~g  348 (357)
T 2b5w_A          284 A------GAFHREMVLHNKALV------GSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTI  348 (357)
T ss_dssp             H------HHHHHHHHHTTCEEE------ECCCCCHHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCC
T ss_pred             H------HHHhHHHHhCCeEEE------EeccCCHHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCc
Confidence            0      011000011122222      22233578999999999999  9 688889999999999999988   3568


Q ss_pred             eEEEeC
Q psy9949         378 KIILNA  383 (383)
Q Consensus       378 kvvl~~  383 (383)
                      |+||++
T Consensus       349 Kvvi~~  354 (357)
T 2b5w_A          349 KTAIEF  354 (357)
T ss_dssp             EEEEEC
T ss_pred             eEEEEe
Confidence            999975

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=3.4e-45  Score=336.96  Aligned_cols=297  Identities=22%  Similarity=0.276  Sum_probs=238.7

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.+++++..  ++ +.|.|+|+++||+|||.++|||++|+++..|..+               ....+|.++|||
T Consensus         1 Mka~~~~~~g~~~~--l~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---------------~~~~~p~i~G~e   62 (302)
T 1iz0_A            1 MKAWVLKRLGGPLE--LV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYL---------------TRLHPPFIPGME   62 (302)
T ss_dssp             CEEEEECSTTSCEE--EE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS---------------SCCCSSBCCCCE
T ss_pred             CeEEEEcCCCCchh--eE-ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---------------CCCCCCCcccce
Confidence            79999999887744  45 6889999999999999999999999999988511               123578999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|+           ||||+++..   +|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+ +    
T Consensus        63 ~~G~V~-----------GdrV~~~~~---~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~----  123 (302)
T 1iz0_A           63 VVGVVE-----------GRRYAALVP---QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-A----  123 (302)
T ss_dssp             EEEEET-----------TEEEEEECS---SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-C----
T ss_pred             EEEEEE-----------CcEEEEecC---CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-C----
Confidence            999998           999998863   699999999999999999999999999999999999999998677 8    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC-hHHHHHHhcCCCccEEEEcCCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE-PEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~-~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +++++|+|+|++|++|++++|+|+.+|++|++++++ ++.++++++|++.++++++ .++.+.+   .++|++|| +|+.
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~---~~~d~vid-~g~~  199 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW---GGLDLVLE-VRGK  199 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT---TSEEEEEE-CSCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh---cCceEEEE-CCHH
Confidence            999999999988999999999999999999999964 5678889999999999887 6776665   68999999 9985


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHH-
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINK-  343 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  343 (383)
                      .....  +++++  ++|+++.+|......   .         .+++.. .+.++..+.+...  .......++++++++ 
T Consensus       200 ~~~~~--~~~l~--~~G~~v~~g~~~~~~---~---------~~~~~~-~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~  260 (302)
T 1iz0_A          200 EVEES--LGLLA--HGGRLVYIGAAEGEV---A---------PIPPLR-LMRRNLAVLGFWL--TPLLREGALVEEALGF  260 (302)
T ss_dssp             THHHH--HTTEE--EEEEEEEC----------C---------CCCTTH-HHHTTCEEEECCH--HHHTTCHHHHHHHHHH
T ss_pred             HHHHH--HHhhc--cCCEEEEEeCCCCCC---C---------CcCHHH-HHhCCCeEEEEec--cchhhhHHHHHHHHhh
Confidence            54444  89999  999999986431100   0         000000 0011222222110  000124678999999 


Q ss_pred             --HHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         344 --FIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       344 --l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                        ++++|++++.++++||++++++|++.+.+++..||+|+++
T Consensus       261 ~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          261 LLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             hHHHHcCCcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence              9999999999999999999999999999888889999974

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=3.2e-45  Score=345.00  Aligned_cols=328  Identities=17%  Similarity=0.178  Sum_probs=250.6

Q ss_pred             CcccceeeEEE-eec---CCC--ceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCC
Q psy9949          22 KYSTRTAAWQI-SSY---GGA--DELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVE   94 (383)
Q Consensus        22 ~~~~~~~a~~~-~~~---g~~--~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~   94 (383)
                      .+|++||++++ +++   |.|  ..++++ +.|.|+| +++||||||.++|||++|++.+.+....      .     +.
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~------~-----~~   71 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGT------D-----YI   71 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEE-EEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSS------S-----SS
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEE-eecCCCCCCCCeEEEEEEEEecCHHHHhhccccccc------c-----cc
Confidence            45788999999 566   655  779999 8999999 9999999999999999999877652000      0     01


Q ss_pred             CCCCCCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCC-----CHHHHHhhhHHH
Q psy9949          95 PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNI-----SDEEAAGVLYTG  169 (383)
Q Consensus        95 ~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~-----~~~~aa~l~~~~  169 (383)
                      ....+|.++|||++|+|++  +++++|++||||++..     |+|+||+++|.+.++++|+++     +++ +++++.++
T Consensus        72 ~~~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~~~~-----G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~  143 (357)
T 2zb4_A           72 TPWQLSQVVDGGGIGIIEE--SKHTNLTKGDFVTSFY-----WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPG  143 (357)
T ss_dssp             CCCCBTSBCEEEEEEEEEE--ECSTTCCTTCEEEEEE-----EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHH
T ss_pred             CCCCCCccccccEEEEEEe--cCCCCCCCCCEEEecC-----CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHH
Confidence            1245789999999999999  8899999999999885     899999999999999999999     555 77888999


Q ss_pred             HHHHHHHHHhhhcCccCCCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hHHHHHh-cCCCeeeeCCChHH
Q psy9949         170 LTAWSALQITAALGLVYPRD--KRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AKDLVTS-LNPNLVIDYNEPEA  244 (383)
Q Consensus       170 ~tA~~~l~~~~~~~~~~~~~--~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~~~~~~-lg~~~v~~~~~~~~  244 (383)
                      +|||+++.+.+++    +++  ++|+|+|++|++|++++|+|+..|+ +|+++++++ +.+.+++ +|++.++|+++.++
T Consensus       144 ~ta~~al~~~~~~----~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~  219 (357)
T 2zb4_A          144 LTSLIGIQEKGHI----TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNV  219 (357)
T ss_dssp             HHHHHHHHHHSCC----CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCH
T ss_pred             HHHHHHHHHhcCC----CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHH
Confidence            9999999778888    999  9999999889999999999999999 999999764 5677765 99999999888777


Q ss_pred             HHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhh-HHHHhhhhhcccccc
Q psy9949         245 MHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKN-AFDLLKSNFESGELC  321 (383)
Q Consensus       245 ~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  321 (383)
                      .+.+.+.  +++|++|||+|+......  +++++  ++|+++.+|...... ............ ...+...    +..+
T Consensus       220 ~~~~~~~~~~~~d~vi~~~G~~~~~~~--~~~l~--~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~i  290 (357)
T 2zb4_A          220 AEQLRESCPAGVDVYFDNVGGNISDTV--ISQMN--ENSHIILCGQISQYN-KDVPYPPPLSPAIEAIQKER----NITR  290 (357)
T ss_dssp             HHHHHHHCTTCEEEEEESCCHHHHHHH--HHTEE--EEEEEEECCCGGGTT-SCCCSSCCCCHHHHHHHHHH----TCEE
T ss_pred             HHHHHHhcCCCCCEEEECCCHHHHHHH--HHHhc--cCcEEEEECCccccc-cCccccccchhhhhhhhhcc----eeEE
Confidence            7776543  379999999997544444  88999  999999986532110 000000000000 0011111    2222


Q ss_pred             CCccEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         322 KTNTIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .+.... .......++++++++++++|++++.+..+|+|+++++||+.+.+++..||+||++
T Consensus       291 ~g~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          291 ERFLVL-NYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             EECCGG-GGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             EEeehh-hhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEE
Confidence            221100 0001126789999999999999987777899999999999999988889999974

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.8e-45  Score=348.91  Aligned_cols=336  Identities=16%  Similarity=0.184  Sum_probs=243.0

Q ss_pred             cccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchh----h------hhhcccc--
Q psy9949          23 YSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVL----N------SLRQLET--   90 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~----~------~~~~~~~--   90 (383)
                      .+..||+++... + +..++++ +.+.|+|++|||||||.+++||++|++++.|..+...    +      .....|.  
T Consensus         4 ~~~~mka~v~~~-~-~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~   80 (379)
T 3iup_A            4 SALQLRSRIKSS-G-ELELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGA   80 (379)
T ss_dssp             EEEEEEEEECTT-S-EEEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHH
T ss_pred             chhhHHHHHhcC-C-CCceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccc
Confidence            356799998763 2 3468899 8999999999999999999999999999987511000    0      0000000  


Q ss_pred             -cCCCCCCCCCccccCceeEEEEecCCCC-CCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHH
Q psy9949          91 -CSVEPVLEFPLTLGRDFCGKIVAKGPRV-TDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYT  168 (383)
Q Consensus        91 -~~~~~~~~~p~~~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~  168 (383)
                       ..+.....+|.++|||++|+|+++|++| ++|++||||++..    +|+|+||+++|.+.++++|+++++++||++++.
T Consensus        81 ~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~----~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  156 (379)
T 3iup_A           81 MRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG----GAMYSQYRCIPADQCLVLPEGATPADGASSFVN  156 (379)
T ss_dssp             HHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC----SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHH
T ss_pred             ccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC----CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhh
Confidence             0000124578999999999999999999 8899999999976    499999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhcCccCCCCCEEEEEc-CCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHH
Q psy9949         169 GLTAWSALQITAALGLVYPRDKRVLVLG-ASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMH  246 (383)
Q Consensus       169 ~~tA~~~l~~~~~~~~~~~~~~~VlI~g-a~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~  246 (383)
                      ++|||+++. ...     +++++|||+| |+|++|++++|+|+.+|++|++++++ ++.++++++|++.++++++.++.+
T Consensus       157 ~~ta~~~~~-~~~-----~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~  230 (379)
T 3iup_A          157 PLTALGMVE-TMR-----LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQ  230 (379)
T ss_dssp             HHHHHHHHH-HHH-----HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHH
T ss_pred             HHHHHHHHH-Hhc-----cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHH
Confidence            999998876 333     5899999996 79999999999999999999999854 577899999999999999988888


Q ss_pred             HHhcC---CCccEEEEcCCCCccccccccccccc---CCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccc
Q psy9949         247 SIAGA---GPYDVILDAAGIPLDQINSYLPFLKT---GKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGEL  320 (383)
Q Consensus       247 ~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~---~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (383)
                      .+++.   .++|++|||+|++...... +++++.   .++|+++.+|.......-..|....   ..+.+.      ...
T Consensus       231 ~v~~~t~~~g~d~v~d~~g~~~~~~~~-~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~---~~~~~~------~~~  300 (379)
T 3iup_A          231 DLTEALVSTGATIAFDATGGGKLGGQI-LTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT---SPTEFN------RNF  300 (379)
T ss_dssp             HHHHHHHHHCCCEEEESCEEESHHHHH-HHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEE---EEEEEC------CCS
T ss_pred             HHHHHhcCCCceEEEECCCchhhHHHH-HHhcchhhhccccceeecccccCceEEEecCCCC---Cccccc------ccc
Confidence            88764   4899999999987553332 566631   1454444433211000000011000   000111      111


Q ss_pred             cCCccEEEEEEc------CC----HHHHHHHHHHHHcCCcccccceeecCCCH--HHHHHHHhcCCCCCeEEEeC
Q psy9949         321 CKTNTIRWGFFM------PI----PYAVKEINKFIERGQIKPVIDSKYNFCEL--PTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       321 ~~~~~~~~~~~~------~~----~~~~~~~~~l~~~g~l~~~~~~~~~l~~~--~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .++..+. ++..      ..    .+.++++++++++ .++++++++|||+++  ++||+.+.+++..||+||+.
T Consensus       301 ~~~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~  373 (379)
T 3iup_A          301 GMAWGMG-GWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINP  373 (379)
T ss_dssp             CSCEEEE-ECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEET
T ss_pred             ccceEEE-EEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeC
Confidence            1222221 1100      01    2345666777767 588899999999999  99999999999999999974

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.2e-44  Score=340.25  Aligned_cols=305  Identities=16%  Similarity=0.207  Sum_probs=236.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCC-CeEEEEEEEEeeChhhHHHhcc--CCcchhhhhhcccccCCCCCCCC---C
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKS-KDVLVEMKAVSVNPIDVAMLGG--YGNVVLNSLRQLETCSVEPVLEF---P  100 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~---p  100 (383)
                      |||+++.+++++  ++++ +.|.|+|++ +||||||.++|||++|++++.|  ..                ....+   |
T Consensus         1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~----------------~~~~~~~~p   61 (366)
T 2cdc_A            1 MKAIIVKPPNAG--VQVK-DVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTL----------------STLPKGKDF   61 (366)
T ss_dssp             CEEEEECTTSCC--CEEE-ECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-----------------------CCSC
T ss_pred             CeEEEEeCCCCc--eEEE-ECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCC----------------CCCCcCCCC
Confidence            799999988863  7888 899999999 9999999999999999999988  41                11345   8


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEee--------------------------cCC-CCCCceEEEeecCcccccC
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVI--------------------------QPH-KQGSFSKLILADSALVHKK  153 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~--------------------------~~~-~~g~~a~~~~v~~~~~~~i  153 (383)
                      .++|||++|+|++  ++ ++|++||||++..                          +.. .+|+|+||++++++.++++
T Consensus        62 ~v~G~E~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~i  138 (366)
T 2cdc_A           62 LVLGHEAIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKI  138 (366)
T ss_dssp             EECCSEEEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEE
T ss_pred             CcCCcceEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEEC
Confidence            9999999999999  77 8899999998742                          111 3699999999999999999


Q ss_pred             CCCCCHHHHHhhhHHHHHHHHHHH--H--hhhcCccCC--C-------CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q psy9949         154 PSNISDEEAAGVLYTGLTAWSALQ--I--TAALGLVYP--R-------DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC  220 (383)
Q Consensus       154 p~~~~~~~aa~l~~~~~tA~~~l~--~--~~~~~~~~~--~-------~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~  220 (383)
                      |++++ ++|+ ++.++.|||+++.  +  .+++    +  +       +++|+|+|+ |++|++++|+|+.+|++|++++
T Consensus       139 P~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~----~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~  211 (366)
T 2cdc_A          139 PKSIE-DIGI-LAQPLADIEKSIEEILEVQKRV----PVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMAN  211 (366)
T ss_dssp             CGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGS----SCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEE
T ss_pred             cCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCc----cccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEe
Confidence            99999 7764 6778999999997  4  6777    7  8       999999997 9999999999999999999999


Q ss_pred             cC----chHHHHHhcCCCeeeeCCChHHHHHHhc-CCCccEEEEcCCCCccc-ccccccccccCCCceEEEecCCCccCC
Q psy9949         221 SG----DAKDLVTSLNPNLVIDYNEPEAMHSIAG-AGPYDVILDAAGIPLDQ-INSYLPFLKTGKFSKFVTLRSPFLKNT  294 (383)
Q Consensus       221 ~~----~~~~~~~~lg~~~v~~~~~~~~~~~i~~-~~g~d~v~d~~g~~~~~-~~~~~~~l~~~~~G~~v~~~~~~~~~~  294 (383)
                      ++    ++.++++++|++.+ + ++ ++.+++.+ .+++|++||++|+.... ..+ +++++  ++|+++.++.....  
T Consensus       212 ~~~~~~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~-~~~l~--~~G~iv~~g~~~~~--  283 (366)
T 2cdc_A          212 RREPTEVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNV-IPLLG--RNGVLGLFGFSTSG--  283 (366)
T ss_dssp             SSCCCHHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHH-GGGEE--EEEEEEECSCCCSC--
T ss_pred             CCccchHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHH-HHHHh--cCCEEEEEecCCCC--
Confidence            65    46688899999988 7 65 65555543 25899999999987543 332 89999  99999998643110  


Q ss_pred             CCCCCchhhhhhH-HHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC------cccccceeecCCCHHHHH
Q psy9949         295 DSLGLVPGLVKNA-FDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ------IKPVIDSKYNFCELPTAF  367 (383)
Q Consensus       295 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~------l~~~~~~~~~l~~~~~a~  367 (383)
                           ........ ..+..    ++..+.      +......++++++++++++|+      ++++++++|||+++++||
T Consensus       284 -----~~~~~~~~~~~~~~----~~~~i~------g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~  348 (366)
T 2cdc_A          284 -----SVPLDYKTLQEIVH----TNKTII------GLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELL  348 (366)
T ss_dssp             -----EEEEEHHHHHHHHH----TTCEEE------ECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHH
T ss_pred             -----ccccChhhhHHHHh----cCcEEE------EecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHH
Confidence                 00000000 00111    122222      222345789999999999999      567888999999999999


Q ss_pred             HHH-hcCCCCCeEEEeC
Q psy9949         368 EKV-QQGHLRGKIILNA  383 (383)
Q Consensus       368 ~~l-~~~~~~gkvvl~~  383 (383)
                      +.+ .+++..||+||++
T Consensus       349 ~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          349 KVLREKEHGEIKIRILW  365 (366)
T ss_dssp             HHHHCCCTTCCEEEEEC
T ss_pred             HHHhhhcCCceEEEEec
Confidence            994 3466789999975

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.2e-42  Score=322.60  Aligned_cols=316  Identities=19%  Similarity=0.248  Sum_probs=240.2

Q ss_pred             ccceeeEEEeec--CC--CceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          24 STRTAAWQISSY--GG--ADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        24 ~~~~~a~~~~~~--g~--~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      +++||+|++.+.  |.  +..++++ +.|.|+|++|||||||.++|||+.|+.. ..                   ...+
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~-e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~-------------------~~~~   63 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIA-SK-------------------RLKE   63 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHH-TT-------------------TCCT
T ss_pred             cccccEEEEeecCCCCCCccceEEE-eCCCCCCCCCEEEEEEEEeccCHHHccc-cC-------------------cCCC
Confidence            567999999985  44  3678998 8999999999999999999999988732 11                   1346


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCC----CCHHH-HHhhhHHHHHHHH
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSN----ISDEE-AAGVLYTGLTAWS  174 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~----~~~~~-aa~l~~~~~tA~~  174 (383)
                      |.++|||++|+|++.  ++++|++||||++.      |+|+||++++.+.++++|++    +++++ +|+++++++|||+
T Consensus        64 p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~~------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~  135 (333)
T 1v3u_A           64 GAVMMGQQVARVVES--KNSAFPAGSIVLAQ------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYF  135 (333)
T ss_dssp             TSBCCCCEEEEEEEE--SCTTSCTTCEEEEC------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHH
T ss_pred             CcccccceEEEEEec--CCCCCCCCCEEEec------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHH
Confidence            789999999999994  67889999999875      89999999999999999997    88888 4888999999999


Q ss_pred             HHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC-hHHHHHHhcC-
Q psy9949         175 ALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE-PEAMHSIAGA-  251 (383)
Q Consensus       175 ~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~-~~~~~~i~~~-  251 (383)
                      ++.+.+++    +++++|+|+|++|++|++++++++..|++|++++++ ++.+.++++|++.++|+.+ .++.+.+.+. 
T Consensus       136 al~~~~~~----~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~  211 (333)
T 1v3u_A          136 GLLEVCGV----KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKAS  211 (333)
T ss_dssp             HHHTTSCC----CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHC
T ss_pred             HHHHhhCC----CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHh
Confidence            99777888    999999999988999999999999999999999965 4567778899998899877 6666666542 


Q ss_pred             -CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEE
Q psy9949         252 -GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGF  330 (383)
Q Consensus       252 -~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (383)
                       +++|++||++|+......  +++++  ++|+++.+|......... ......  ....+..    ++..+.|.......
T Consensus       212 ~~~~d~vi~~~g~~~~~~~--~~~l~--~~G~~v~~g~~~~~~~~~-~~~~~~--~~~~~~~----~~~~i~g~~~~~~~  280 (333)
T 1v3u_A          212 PDGYDCYFDNVGGEFLNTV--LSQMK--DFGKIAICGAISVYNRMD-QLPPGP--SPESIIY----KQLRIEGFIVYRWQ  280 (333)
T ss_dssp             TTCEEEEEESSCHHHHHHH--HTTEE--EEEEEEECCCCC--------CCBCC--CHHHHHH----TTCEEEECCGGGCC
T ss_pred             CCCCeEEEECCChHHHHHH--HHHHh--cCCEEEEEeccccccCCC-CCCCCc--CHHHHhh----cCceEEEEehhhcc
Confidence             479999999998654444  89999  999999986532110000 000000  0011111    12222221100000


Q ss_pred             EcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         331 FMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       331 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      .....++++++++++++|++++.+..+++|+++++||+.+.+++..||+||++
T Consensus       281 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          281 GDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             THHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            00125678899999999999887766789999999999999988889999975

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=7.5e-42  Score=320.65  Aligned_cols=324  Identities=17%  Similarity=0.186  Sum_probs=239.0

Q ss_pred             cccceeeEEEeec--CCCc--eeEeec-cccCCC-CCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCC
Q psy9949          23 YSTRTAAWQISSY--GGAD--ELQFND-NVKTPI-LKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPV   96 (383)
Q Consensus        23 ~~~~~~a~~~~~~--g~~~--~l~~~~-~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~   96 (383)
                      ||++||++++...  +.|.  .+++++ +.+.|. |++|||||||.++|+|+.|. ...|...       . +    ...
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~-------~-~----~~~   67 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPD-------P-S----TAA   67 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC-------------------
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCC-------C-C----ccc
Confidence            3567899888865  5555  577752 467775 89999999999999888875 3444310       0 0    001


Q ss_pred             CCCCccccCceeEEEEe--cCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcc--cccCCC---CCCHHHHHhhhHHH
Q psy9949          97 LEFPLTLGRDFCGKIVA--KGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSAL--VHKKPS---NISDEEAAGVLYTG  169 (383)
Q Consensus        97 ~~~p~~~G~e~~G~Vv~--vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~--~~~ip~---~~~~~~aa~l~~~~  169 (383)
                      ..+|+++|||++|++++  +|+++++|++||||+++      |+|+||++++.+.  ++++|+   .++++ +|++++++
T Consensus        68 ~~~p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~~------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~  140 (345)
T 2j3h_A           68 LAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGI------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPG  140 (345)
T ss_dssp             --CCCCTTSBCEEEEEEEEEEECSTTCCTTCEEEEE------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHH
T ss_pred             cCCCcCCCCeeecceEEEEEecCCCCCCCCCEEEee------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccH
Confidence            24688999999999999  99999999999999876      7899999998876  999996   35555 67888899


Q ss_pred             HHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH-hcCCCeeeeCCCh-HHHH
Q psy9949         170 LTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT-SLNPNLVIDYNEP-EAMH  246 (383)
Q Consensus       170 ~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~-~lg~~~v~~~~~~-~~~~  246 (383)
                      +|||+++.+.+++    +++++|||+|++|++|++++|+|+..|++|++++++ ++.+.++ ++|++.++|+.+. ++.+
T Consensus       141 ~ta~~al~~~~~~----~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~  216 (345)
T 2j3h_A          141 MTAYAGFYEVCSP----KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTA  216 (345)
T ss_dssp             HHHHHHHHTTSCC----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHH
T ss_pred             HHHHHHHHHHhCC----CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHH
Confidence            9999999777888    999999999988999999999999999999999965 4667777 7999999988763 5555


Q ss_pred             HHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCc
Q psy9949         247 SIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTN  324 (383)
Q Consensus       247 ~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (383)
                      .+.+.  +++|++||++|+......  +++++  ++|+++.+|............  ....  ..+...    +..+.|.
T Consensus       217 ~~~~~~~~~~d~vi~~~g~~~~~~~--~~~l~--~~G~~v~~G~~~~~~~~~~~~--~~~~--~~~~~~----~~~i~g~  284 (345)
T 2j3h_A          217 ALKRCFPNGIDIYFENVGGKMLDAV--LVNMN--MHGRIAVCGMISQYNLENQEG--VHNL--SNIIYK----RNRIQGF  284 (345)
T ss_dssp             HHHHHCTTCEEEEEESSCHHHHHHH--HTTEE--EEEEEEECCCGGGTTCSSCCC--BSCT--THHHHH----TCEEEEC
T ss_pred             HHHHHhCCCCcEEEECCCHHHHHHH--HHHHh--cCCEEEEEccccccccCCccc--cccH--HHHhhh----ceeecee
Confidence            55432  579999999998544444  89999  999999986432110000000  0000  011111    1122221


Q ss_pred             cEEEEEEcCCHHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         325 TIRWGFFMPIPYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                      ... .......+.++++++++++|++++.+.++|+|+++++||+.+.+++..||+||++
T Consensus       285 ~~~-~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          285 VVS-DFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             CGG-GGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEES
T ss_pred             eeh-hhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEe
Confidence            000 0001124568999999999999988888899999999999999999999999974

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=3.1e-33  Score=313.90  Aligned_cols=305  Identities=19%  Similarity=0.226  Sum_probs=230.3

Q ss_pred             EEEeecCCCceeEeeccccCCC-CC--CCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          30 WQISSYGGADELQFNDNVKTPI-LK--SKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        30 ~~~~~~g~~~~l~~~~~~~~p~-~~--~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      +....+|..+.+.|. +.+... +.  ++||+|||.++|||+.|+++..|..+..     ..|    ......|.++|+|
T Consensus      1533 l~~~~~g~l~sl~~~-~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~-----~~p----~~~~~~~~~lG~E 1602 (2512)
T 2vz8_A         1533 VNVLSRGDLSSIRWV-CSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPD-----SIP----GKWLTRDCMLGME 1602 (2512)
T ss_dssp             EEESSTTCTTSEEEE-ECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGG-----GCC----SCCSCSSSCCCCE
T ss_pred             EEccCCCCcCceEEE-ecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccc-----ccc----ccccccCCceEEE
Confidence            334455666778887 455432 33  8999999999999999999998862210     000    0112346789999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|.          +||||+++..   .|+|+||+++|.+.++++|+++++++||+++++++|||+++.+.+++    
T Consensus      1603 ~aG~V~----------vGdrV~g~~~---~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l---- 1665 (2512)
T 2vz8_A         1603 FSGRDA----------SGRRVMGMVP---AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRM---- 1665 (2512)
T ss_dssp             EEEEET----------TSCCEEEECS---SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCC----
T ss_pred             EEEEEc----------cCCEEEEeec---CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcC----
Confidence            999873          7999999863   59999999999999999999999999999999999999999878888    


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh----cCCCeeeeCCChHHHHHHhcC---CCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS----LNPNLVIDYNEPEAMHSIAGA---GPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~----lg~~~v~~~~~~~~~~~i~~~---~g~d~v~  258 (383)
                      ++|++|||+||+|++|++++|+||..|++|++++++ ++.+++++    +|+++++++++.++.+.+++.   .|+|+||
T Consensus      1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVl 1745 (2512)
T 2vz8_A         1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVL 1745 (2512)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEE
T ss_pred             CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEE
Confidence            999999999999999999999999999999999965 45677764    789999999998998888753   4799999


Q ss_pred             EcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEE----cCC
Q psy9949         259 DAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFF----MPI  334 (383)
Q Consensus       259 d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  334 (383)
                      |++++......  +++++  ++|+++.+|.......             .....     ....++..+.....    ...
T Consensus      1746 d~~g~~~l~~~--l~~L~--~~Gr~V~iG~~~~~~~-------------~~~~~-----~~~~~~~~~~g~~l~~~~~~~ 1803 (2512)
T 2vz8_A         1746 NSLAEEKLQAS--VRCLA--QHGRFLEIGKFDLSNN-------------HALGM-----AVFLKNVTFHGILLDSLFEEG 1803 (2512)
T ss_dssp             ECCCHHHHHHH--HTTEE--EEEEEEECCCHHHHTT-------------CEEEG-----GGGGGCCEEEECCGGGTTSSC
T ss_pred             ECCCchHHHHH--HHhcC--CCcEEEEeeccccccc-------------Ccccc-----cccccCCcEEEeeHHHHhhhC
Confidence            99986555555  99999  9999999853210000             00000     01111111111000    011


Q ss_pred             ----HHHHHHHHHHHHcCCcccccceeecCCCHHHHHHHHhcCCCCCeEEEeC
Q psy9949         335 ----PYAVKEINKFIERGQIKPVIDSKYNFCELPTAFEKVQQGHLRGKIILNA  383 (383)
Q Consensus       335 ----~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~a~~~l~~~~~~gkvvl~~  383 (383)
                          .+.++.+.+++++|+++++++++||++++++|++.+.+++..||+||++
T Consensus      1804 ~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1804 GATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             CHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEEC
Confidence                3344444455567889998999999999999999999999999999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.82  E-value=2.2e-20  Score=160.53  Aligned_cols=133  Identities=29%  Similarity=0.360  Sum_probs=103.5

Q ss_pred             cccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH
Q psy9949         148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD  226 (383)
Q Consensus       148 ~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~  226 (383)
                      +.++++|+++++++||+++++++|||+++.+..++    +++++|+|+||+|++|++++++++..|++|+++++++ +.+
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~   77 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRL----SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   77 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCC----CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCC----CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            56889999999999999999999999999877788    9999999999999999999999999999999999664 456


Q ss_pred             HHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         227 LVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       227 ~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .++++|++.++++.+.++.+.+.+   ..++|++||++|.......  +++++  ++|+++.+|.
T Consensus        78 ~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~--~~~l~--~~G~~v~~g~  138 (198)
T 1pqw_A           78 MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRG--VQILA--PGGRFIELGK  138 (198)
T ss_dssp             HHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHH--HHTEE--EEEEEEECSC
T ss_pred             HHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHH--HHHhc--cCCEEEEEcC
Confidence            778899988888887776666654   2479999999986554444  88999  9999999864

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.58  E-value=4.9e-10  Score=106.25  Aligned_cols=174  Identities=14%  Similarity=0.190  Sum_probs=122.0

Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEE------eecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHH
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYG------VIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWS  174 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~------~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~  174 (383)
                      ...|++.++.|.++|++++++.+|+.++.      +......|++++|+..+...++++|+.++.++++.. .+..++|+
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~  153 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSA  153 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHH
Confidence            45789999999999999999999999731      100011377899998888899999998887776543 34456777


Q ss_pred             HHHHhhhc-CccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949         175 ALQITAAL-GLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       175 ~l~~~~~~-~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~  250 (383)
                      ++...... ..  .++++|+|+| +|++|.++++.++..|+ +|+++.++. +. ++++++|++ ++++.  ++.+.+  
T Consensus       154 av~~a~~~~~~--l~g~~VlIiG-aG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~--~l~~~l--  225 (404)
T 1gpj_A          154 AVELAERELGS--LHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD--ELVDHL--  225 (404)
T ss_dssp             HHHHHHHHHSC--CTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--GHHHHH--
T ss_pred             HHHHHHHHhcc--ccCCEEEEEC-hHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecHH--hHHHHh--
Confidence            76532211 00  4789999999 69999999999999999 999988764 43 677888875 43332  333333  


Q ss_pred             CCCccEEEEcCCCCcccc--cccccc--c--ccCCCceEEEec
Q psy9949         251 AGPYDVILDAAGIPLDQI--NSYLPF--L--KTGKFSKFVTLR  287 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~--~~~~~~--l--~~~~~G~~v~~~  287 (383)
                       .++|+|++|++.+....  .. ++.  +  +  ++|..+.++
T Consensus       226 -~~aDvVi~at~~~~~~~~~~~-l~~~~lk~r--~~~~~v~vd  264 (404)
T 1gpj_A          226 -ARSDVVVSATAAPHPVIHVDD-VREALRKRD--RRSPILIID  264 (404)
T ss_dssp             -HTCSEEEECCSSSSCCBCHHH-HHHHHHHCS--SCCCEEEEE
T ss_pred             -cCCCEEEEccCCCCceecHHH-HHHHHHhcc--CCCCEEEEE
Confidence             37999999998765422  21 444  3  3  566665554

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.40  E-value=1.2e-07  Score=91.04  Aligned_cols=157  Identities=17%  Similarity=0.128  Sum_probs=102.5

Q ss_pred             CCccccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH
Q psy9949          99 FPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI  178 (383)
Q Consensus        99 ~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~  178 (383)
                      +|..+ .++.|+|+++|.++.++      ..+.   ..|.+...+....+.+.+-   .    ...+.....++|+++.+
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l------~a~~---~~Gilv~~~~~vn~sVae~---~----~r~l~~~~~s~~~g~~r  266 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRL------YQFA---AAGDLAFPAINVNDSVTKS---K----FDNKYGTRHSLIDGINR  266 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHH------HHHH---HTTCCCSCEEECTTSHHHH---T----THHHHHHHHHHHHHHHH
T ss_pred             chhhh-cCeEEEEEEeCCChhHH------HHHH---HcCCEEEecCCccHHHHHH---H----HhhhhhhhhhhhHHHHh
Confidence            55556 89999999999888765      1111   1133332222211122220   0    01122344567777653


Q ss_pred             hhh-cCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccE
Q psy9949         179 TAA-LGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       179 ~~~-~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~  256 (383)
                      ... .    .+|++|+|.| .|.+|..+++.++.+|++|++++++. +.+.+.++|++ +.+     +.+.+   .++|+
T Consensus       267 ~~~~~----l~GktV~IiG-~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~-----l~e~l---~~aDv  332 (494)
T 3ce6_A          267 GTDAL----IGGKKVLICG-YGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVT-----VEEAI---GDADI  332 (494)
T ss_dssp             HHCCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC-----HHHHG---GGCSE
T ss_pred             ccCCC----CCcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Eec-----HHHHH---hCCCE
Confidence            321 4    7899999999 79999999999999999999998654 55677788875 322     22222   46999


Q ss_pred             EEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       257 v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      |++++|.........++.++  ++|+++.++.
T Consensus       333 Vi~atgt~~~i~~~~l~~mk--~ggilvnvG~  362 (494)
T 3ce6_A          333 VVTATGNKDIIMLEHIKAMK--DHAILGNIGH  362 (494)
T ss_dssp             EEECSSSSCSBCHHHHHHSC--TTCEEEECSS
T ss_pred             EEECCCCHHHHHHHHHHhcC--CCcEEEEeCC
Confidence            99999987754312278889  9999999864

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.31  E-value=1.4e-06  Score=81.21  Aligned_cols=93  Identities=19%  Similarity=0.231  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCe--eeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNL--VIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~--v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      +++|+|+| +|++|++++++++.+|++|++++++ ++.+.++++++..  +++++..++.+.+.   ++|+||+|++.+.
T Consensus       167 ~~~VlViG-aGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~DvVI~~~~~~~  242 (361)
T 1pjc_A          167 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA---EADLLIGAVLVPG  242 (361)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH---TCSEEEECCCCTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHc---CCCEEEECCCcCC
Confidence            48999999 5999999999999999999999865 4566666665443  34444445554443   7999999998754


Q ss_pred             c------cccccccccccCCCceEEEecC
Q psy9949         266 D------QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       266 ~------~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .      ... .++.++  ++|++++++.
T Consensus       243 ~~~~~li~~~-~~~~~~--~g~~ivdv~~  268 (361)
T 1pjc_A          243 RRAPILVPAS-LVEQMR--TGSVIVDVAV  268 (361)
T ss_dssp             SSCCCCBCHH-HHTTSC--TTCEEEETTC
T ss_pred             CCCCeecCHH-HHhhCC--CCCEEEEEec
Confidence            2      111 167788  9999999864

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.01  E-value=2.2e-05  Score=73.68  Aligned_cols=97  Identities=25%  Similarity=0.280  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCee-eeCCC---------------hH----HHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLV-IDYNE---------------PE----AMH  246 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v-~~~~~---------------~~----~~~  246 (383)
                      ++++|+|+| +|.+|++++++|+.+|++|++.++. ++.+.++++|++.+ ++..+               .+    ..+
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            688999999 8999999999999999998888854 56677778998654 23311               00    011


Q ss_pred             HHhc-CCCccEEEEcC---CCCc--ccccccccccccCCCceEEEec
Q psy9949         247 SIAG-AGPYDVILDAA---GIPL--DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       247 ~i~~-~~g~d~v~d~~---g~~~--~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      .+.+ ..++|+||+|+   |.+.  ......++.++  +++.++.++
T Consensus       250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk--~g~vivdva  294 (384)
T 1l7d_A          250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMK--PGSVIIDLA  294 (384)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSC--TTCEEEETT
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCC--CCCEEEEEe
Confidence            1222 24799999999   5322  21111277888  999999985

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.00  E-value=2.4e-05  Score=73.21  Aligned_cols=94  Identities=15%  Similarity=0.176  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHh-cCCCeeeeC-CChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTS-LNPNLVIDY-NEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~-lg~~~v~~~-~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++++|+|+| +|++|+.+++.++.+|++|++++++. +.+.+++ +|++...+. ...++.+.+   .++|+|++|++.+
T Consensus       167 ~g~~V~ViG-~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l---~~aDvVi~~~~~p  242 (377)
T 2vhw_A          167 EPADVVVIG-AGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAV---KRADLVIGAVLVP  242 (377)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHH---HHCSEEEECCCCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHH---cCCCEEEECCCcC
Confidence            578999999 59999999999999999999998654 4555655 676532222 223444433   3689999999866


Q ss_pred             cc------cccccccccccCCCceEEEecC
Q psy9949         265 LD------QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       265 ~~------~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..      ... .++.++  ++|+++.++.
T Consensus       243 ~~~t~~li~~~-~l~~mk--~g~~iV~va~  269 (377)
T 2vhw_A          243 GAKAPKLVSNS-LVAHMK--PGAVLVDIAI  269 (377)
T ss_dssp             TSCCCCCBCHH-HHTTSC--TTCEEEEGGG
T ss_pred             CCCCcceecHH-HHhcCC--CCcEEEEEec
Confidence            42      222 267888  9999999863

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.99  E-value=2.5e-05  Score=72.90  Aligned_cols=93  Identities=17%  Similarity=0.217  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHh-cCCCeeeeCCC-hHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTS-LNPNLVIDYNE-PEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~-lg~~~v~~~~~-~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++++|+|+|+ |++|+.+++.++.+|++|++++++. +.+.+.+ +|.....+..+ .++.+.+   .++|++++|++.+
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~---~~~DvVi~~~g~~  240 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSV---QHADLLIGAVLVP  240 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHH---HHCSEEEECCC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHH---hCCCEEEECCCCC
Confidence            4689999995 9999999999999999999998654 4555544 77653233332 3343333   3699999999865


Q ss_pred             c-------ccccccccccccCCCceEEEecC
Q psy9949         265 L-------DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       265 ~-------~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .       ....  ++.++  ++|+++.++.
T Consensus       241 ~~~~~~li~~~~--l~~mk--~gg~iV~v~~  267 (369)
T 2eez_A          241 GAKAPKLVTRDM--LSLMK--EGAVIVDVAV  267 (369)
T ss_dssp             -----CCSCHHH--HTTSC--TTCEEEECC-
T ss_pred             ccccchhHHHHH--HHhhc--CCCEEEEEec
Confidence            4       2222  77888  9999999864

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.86  E-value=5.6e-05  Score=60.40  Aligned_cols=103  Identities=14%  Similarity=0.098  Sum_probs=71.9

Q ss_pred             HHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHH
Q psy9949         170 LTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHS  247 (383)
Q Consensus       170 ~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~  247 (383)
                      ..++++++....     ..+++|+|.| +|.+|.++++.++..|++|++..++. +. +++++++.+ +....+  +.+.
T Consensus         7 sv~~~a~~~~~~-----~~~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~~--~~~~   77 (144)
T 3oj0_A            7 SIPSIVYDIVRK-----NGGNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIND--IDSL   77 (144)
T ss_dssp             SHHHHHHHHHHH-----HCCCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECSC--HHHH
T ss_pred             cHHHHHHHHHHh-----ccCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeecC--HHHH
Confidence            346777764443     4689999999 79999999999888899977666654 33 456777753 333332  2222


Q ss_pred             HhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         248 IAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       248 i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +   .++|+|+.|++.......  .+.++  +++.++.++.
T Consensus        78 ~---~~~Divi~at~~~~~~~~--~~~l~--~g~~vid~~~  111 (144)
T 3oj0_A           78 I---KNNDVIITATSSKTPIVE--ERSLM--PGKLFIDLGN  111 (144)
T ss_dssp             H---HTCSEEEECSCCSSCSBC--GGGCC--TTCEEEECCS
T ss_pred             h---cCCCEEEEeCCCCCcEee--HHHcC--CCCEEEEccC
Confidence            2   368999999998755444  56777  8888888754

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.85  E-value=4.8e-05  Score=71.64  Aligned_cols=98  Identities=22%  Similarity=0.270  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeee-eCC-------------ChHH----HHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVI-DYN-------------EPEA----MHSI  248 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~-~~~-------------~~~~----~~~i  248 (383)
                      ++++|+|+| +|.+|+.++++|+.+|++|++++++ ++.+.++++|++.+. +..             ..++    .+.+
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            578999999 7999999999999999999999854 566777888876441 211             1111    0112


Q ss_pred             hcC-CCccEEEEcCCCC-----cccccccccccccCCCceEEEecC
Q psy9949         249 AGA-GPYDVILDAAGIP-----LDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       249 ~~~-~g~d~v~d~~g~~-----~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+. .++|+||++++.+     .......++.++  +++.++.++.
T Consensus       250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk--~g~vIVdva~  293 (401)
T 1x13_A          250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK--AGSVIVDLAA  293 (401)
T ss_dssp             HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSC--TTCEEEETTG
T ss_pred             HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCC--CCcEEEEEcC
Confidence            221 3699999996432     211111278888  9999999863

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.60  E-value=0.00032  Score=65.46  Aligned_cols=97  Identities=25%  Similarity=0.270  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeee-------------CCC---hHH----HH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVID-------------YNE---PEA----MH  246 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~-------------~~~---~~~----~~  246 (383)
                      ++.+|+|+| +|.+|+.++++++.+|++|++.++. ++.+.++++|++.+..             |..   ..+    .+
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            578999999 7999999999999999999998854 5677888888753211             110   000    11


Q ss_pred             HHhc-CCCccEEEEcCCCCc-----ccccccccccccCCCceEEEec
Q psy9949         247 SIAG-AGPYDVILDAAGIPL-----DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       247 ~i~~-~~g~d~v~d~~g~~~-----~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      .+.+ ..+.|+||.++..+.     ......++.++  +++.+|++.
T Consensus       268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk--~GsVIVDvA  312 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMK--PGSVVVDLA  312 (405)
T ss_dssp             HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSC--TTCEEEETT
T ss_pred             HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCC--CCCEEEEEe
Confidence            2222 147999999965332     11222377888  999999985

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=97.58  E-value=0.00016  Score=63.21  Aligned_cols=97  Identities=19%  Similarity=0.132  Sum_probs=62.6

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH----hcCC-Cee-eeCCChHHHHHHhcC
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT----SLNP-NLV-IDYNEPEAMHSIAGA  251 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~----~lg~-~~v-~~~~~~~~~~~i~~~  251 (383)
                      ...+    +++++||..| +| .|..++.+++. +.+|++++.+ +..+.++    ..+. +.+ +...  ++.+.....
T Consensus        86 ~~~~----~~~~~vldiG-~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~~~~~~  156 (248)
T 2yvl_A           86 KLNL----NKEKRVLEFG-TG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV--DFKDAEVPE  156 (248)
T ss_dssp             HTTC----CTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS--CTTTSCCCT
T ss_pred             hcCC----CCCCEEEEeC-CC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc--ChhhcccCC
Confidence            5566    8899999999 66 69999999998 7899999954 4444443    3343 222 1111  111111022


Q ss_pred             CCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         252 GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       252 ~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .++|+|+...+.+......+.++++  ++|+++..
T Consensus       157 ~~~D~v~~~~~~~~~~l~~~~~~L~--~gG~l~~~  189 (248)
T 2yvl_A          157 GIFHAAFVDVREPWHYLEKVHKSLM--EGAPVGFL  189 (248)
T ss_dssp             TCBSEEEECSSCGGGGHHHHHHHBC--TTCEEEEE
T ss_pred             CcccEEEECCcCHHHHHHHHHHHcC--CCCEEEEE
Confidence            4799999987765332322367889  99999886

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.53  E-value=0.00038  Score=64.42  Aligned_cols=98  Identities=17%  Similarity=0.200  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeee-e--------CCC---h----HHHHHHhc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVI-D--------YNE---P----EAMHSIAG  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~-~--------~~~---~----~~~~~i~~  250 (383)
                      ++.+|+|+| +|.+|+.+++.++.+|++|++.+++ ++.+.++++|++.+. +        |..   .    ...+.+.+
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            578999999 7999999999999999999999854 567778888875331 1        000   0    00112222


Q ss_pred             -CCCccEEEEcCCCCc-----ccccccccccccCCCceEEEecC
Q psy9949         251 -AGPYDVILDAAGIPL-----DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       251 -~~g~d~v~d~~g~~~-----~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                       ..++|+||.++..+.     ......++.++  +++.+|+++.
T Consensus       262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mk--pGsVIVDvA~  303 (381)
T 3p2y_A          262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQ--PGSVVVDLAG  303 (381)
T ss_dssp             HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSC--TTCEEEETTG
T ss_pred             HHhcCCEEEECCCCCCcccceeecHHHHhcCC--CCcEEEEEeC
Confidence             258999999874331     11222377888  9999999853

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.40  E-value=0.00061  Score=60.45  Aligned_cols=77  Identities=22%  Similarity=0.269  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +. +.++++|....   .|..+.+-.+.+    . +.+++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999999764 33 34566765422   344443333222    2 24789999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus       108 VNNAG~~  114 (273)
T 4fgs_A          108 FVNAGGG  114 (273)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999863

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.35  E-value=0.00071  Score=51.39  Aligned_cols=93  Identities=20%  Similarity=0.260  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+.+|+|+|+ |.+|..+++.+...| .+|++++++. +.+.+...+...+ .|..+.......  ..++|+||++++..
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vi~~~~~~   80 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKA--LGGFDAVISAAPFF   80 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHH--TTTCSEEEECSCGG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHH--HcCCCEEEECCCch
Confidence            4578999996 999999999999999 6998888664 4455555554432 344443222222  24899999999765


Q ss_pred             cccccccccccccCCCceEEEe
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...... ..+..  .+..++.+
T Consensus        81 ~~~~~~-~~~~~--~g~~~~~~   99 (118)
T 3ic5_A           81 LTPIIA-KAAKA--AGAHYFDL   99 (118)
T ss_dssp             GHHHHH-HHHHH--TTCEEECC
T ss_pred             hhHHHH-HHHHH--hCCCEEEe
Confidence            433321 23344  45555544

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.31  E-value=0.00055  Score=59.67  Aligned_cols=77  Identities=27%  Similarity=0.403  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhcCCCee---eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSLNPNLV---IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~lg~~~v---~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|++++|+||++++|.++++.+...|++|+.++++..   .+.+++.|....   .|..+....+.+.+.+++|++++++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            6899999999999999999999999999999986542   244555665422   2444433333333446899999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        88 Gi~   90 (247)
T 4hp8_A           88 GII   90 (247)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            863

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.30  E-value=0.00044  Score=60.11  Aligned_cols=77  Identities=21%  Similarity=0.293  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCC-eeeeCCChHHHHH-HhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPN-LVIDYNEPEAMHS-IAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~-~v~~~~~~~~~~~-i~~~~g~d~v~d~~g~~  264 (383)
                      +|+++||+||++++|.++++.+...|++|++++++++ .+....-.+. ...|..+.+-.++ +.+.+++|++++++|..
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~   89 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS   89 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            6899999999999999999999999999999996542 2211111111 1134444443333 34457899999999863

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.29  E-value=0.0016  Score=60.98  Aligned_cols=102  Identities=18%  Similarity=0.107  Sum_probs=71.6

Q ss_pred             HHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949         172 AWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       172 A~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~  250 (383)
                      .+.++.+....   .-.|++|+|.| .|.+|..+++.++.+|++|+++..+. +...+...|.. +.     ++.+.   
T Consensus       206 ~~~gi~rat~~---~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~-----~Leea---  272 (435)
T 3gvp_A          206 ILDGLKRTTDM---MFGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFR-LV-----KLNEV---  272 (435)
T ss_dssp             HHHHHHHHHCC---CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHH---
T ss_pred             HHHHHHHhhCc---eecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCE-ec-----cHHHH---
Confidence            45555544332   04899999999 89999999999999999999988654 33445555642 21     12222   


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..+.|+++.|+|.........++.++  +++.++.++.
T Consensus       273 l~~ADIVi~atgt~~lI~~e~l~~MK--~gailINvgr  308 (435)
T 3gvp_A          273 IRQVDIVITCTGNKNVVTREHLDRMK--NSCIVCNMGH  308 (435)
T ss_dssp             TTTCSEEEECSSCSCSBCHHHHHHSC--TTEEEEECSS
T ss_pred             HhcCCEEEECCCCcccCCHHHHHhcC--CCcEEEEecC
Confidence            24689999998877654422388889  9999998864

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.25  E-value=0.0015  Score=57.24  Aligned_cols=76  Identities=21%  Similarity=0.298  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~  254 (383)
                      +|++++|+||++++|.++++.+...|++|+.+++++ +.+    .+++.|....   .|..+.+-.+.+    . +.+++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999989999999998664 322    2344554422   344444333322    2 24789


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++++++|.
T Consensus        86 DiLVNNAGi   94 (254)
T 4fn4_A           86 DVLCNNAGI   94 (254)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999984

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.16  E-value=0.0017  Score=56.62  Aligned_cols=75  Identities=15%  Similarity=0.138  Sum_probs=52.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCCee--eeCCChHHHHHH-----hcCCCccEEEEc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPNLV--IDYNEPEAMHSI-----AGAGPYDVILDA  260 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~~v--~~~~~~~~~~~i-----~~~~g~d~v~d~  260 (383)
                      ++|||+||++++|.++++.+...|++|+.++++++ .+ .+++.+....  .|..+.+-.+.+     .+.+++|+++++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999996643 33 3333332122  344443333222     224789999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus        83 AG~~   86 (247)
T 3ged_A           83 ACRG   86 (247)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9853

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.14  E-value=0.0015  Score=57.27  Aligned_cols=77  Identities=21%  Similarity=0.250  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-H---HHHhcCCCee---eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-D---LVTSLNPNLV---IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~---~~~~lg~~~v---~~~~~~~~~~----~i~-~~~g~  254 (383)
                      +|++++|+||++++|.++++.+...|++|+.++++++ . +   .+++.|.+..   .|..+.+-.+    ++. +.+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            6899999999999999999999999999999986642 2 2   2334454322   2444433332    222 34689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++++++|..
T Consensus        88 DiLVNNAG~~   97 (255)
T 4g81_D           88 DILINNAGIQ   97 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEECCCCC
Confidence            9999999863

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.14  E-value=0.0019  Score=56.40  Aligned_cols=77  Identities=23%  Similarity=0.353  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCee---eeCCChHHHHH----Hhc-CCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLV---IDYNEPEAMHS----IAG-AGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v---~~~~~~~~~~~----i~~-~~g~d~v  257 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++.+ . +...+++....   .|..+.+..+.    +.+ .+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            6789999999999999999999999999999986643 2 34455554322   24444332222    222 3689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus        85 v~nAg~~   91 (247)
T 3rwb_A           85 VNNASIV   91 (247)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.14  E-value=0.0019  Score=56.33  Aligned_cols=76  Identities=24%  Similarity=0.390  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee-eeCCChHHHHHHh-----cCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV-IDYNEPEAMHSIA-----GAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v-~~~~~~~~~~~i~-----~~~g~d~v~d  259 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +. +..++++...+ .|..+.+-.+.+.     ..+++|++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            468999999999999999999999999999998764 33 33445553222 3544433222221     2367999999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      ++|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9985

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.13  E-value=0.0023  Score=55.80  Aligned_cols=77  Identities=26%  Similarity=0.396  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCee---eeCCChHHHHH-HhcCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLV---IDYNEPEAMHS-IAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v---~~~~~~~~~~~-i~~~~g~d~v~d~  260 (383)
                      .++++|||+||+|++|..++..+...|++|++++++. +.+ ..+++.....   .|..+.+.... +.+.+++|++|.+
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            5788999999999999999999989999999999764 333 3344443222   24444333333 3344689999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus        92 Ag~   94 (249)
T 3f9i_A           92 AGI   94 (249)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            985

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.12  E-value=0.0036  Score=54.26  Aligned_cols=77  Identities=31%  Similarity=0.407  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCee--eeCCChHHHHHHh-cCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLV--IDYNEPEAMHSIA-GAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v--~~~~~~~~~~~i~-~~~g~d~v~d~~g  262 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++. +.+ ...++....+  .|..+.+..+.+. ..+++|++|+++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            578999999999999999999999999999998764 332 3333432223  3444443333333 3457999999998


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        86 ~~   87 (244)
T 3d3w_A           86 VA   87 (244)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.09  E-value=0.00091  Score=59.02  Aligned_cols=74  Identities=27%  Similarity=0.364  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHH----HHHh-cCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAM----HSIA-GAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~----~~i~-~~~g~d~v~d~~g  262 (383)
                      +|+++||+||++++|+++++.+...|++|+.+.+++.....+.+.  ...|..+.+-.    +.+. +.+++|++++++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~--~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG   87 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELF--VEADLTTKEGCAIVAEATRQRLGGVDVIVHMLG   87 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTE--EECCTTSHHHHHHHHHHHHHHTSSCSEEEECCC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEE--EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            789999999999999999999999999999999764332222211  11344443322    2222 3478999999988


Q ss_pred             C
Q psy9949         263 I  263 (383)
Q Consensus       263 ~  263 (383)
                      .
T Consensus        88 ~   88 (261)
T 4h15_A           88 G   88 (261)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.07  E-value=0.002  Score=55.59  Aligned_cols=72  Identities=24%  Similarity=0.292  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCC-Cee-eeCCChHHHHHHhc-CCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNP-NLV-IDYNEPEAMHSIAG-AGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~-~~v-~~~~~~~~~~~i~~-~~g~d~v~d~~g~  263 (383)
                      .+.+|+|+||+|.+|..++..+...|++|++++++. +.+.+.+.+. ..+ .|..     +.+.+ .+++|+||.++|.
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-----EDFSHAFASIDAVVFAAGS   94 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-----SCCGGGGTTCSEEEECCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-----HHHHHHHcCCCEEEECCCC
Confidence            578999999999999999999999999999999764 4444444455 322 2332     22222 3589999999986


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        95 ~   95 (236)
T 3e8x_A           95 G   95 (236)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.04  E-value=0.0015  Score=57.60  Aligned_cols=76  Identities=14%  Similarity=0.176  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcCCCee-eeCCChHHHHH----Hh-cCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLNPNLV-IDYNEPEAMHS----IA-GAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg~~~v-~~~~~~~~~~~----i~-~~~g~d~v~d  259 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++ + .+.+.+.+...+ .|..+.+-.+.    +. ..+++|++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            567899999999999999999888999999999664 3 234445554322 35444332222    22 2368999999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      ++|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9985

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.04  E-value=0.0056  Score=54.90  Aligned_cols=91  Identities=16%  Similarity=0.167  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.+++|+|.| .|.+|..+++.++.+|++|++.++.. +.+.+.++|+. .++..  ++.+.   ..+.|+|+.++....
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-~~~~~--~l~~~---l~~aDvVi~~~p~~~  225 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGME-PFHIS--KAAQE---LRDVDVCINTIPALV  225 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSE-EEEGG--GHHHH---TTTCSEEEECCSSCC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCe-ecChh--hHHHH---hcCCCEEEECCChHH
Confidence            3689999999 89999999999999999999998664 44455667764 23221  22222   247999999997644


Q ss_pred             ccccccccccccCCCceEEEec
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ..... ++.++  +++.++.++
T Consensus       226 i~~~~-l~~mk--~~~~lin~a  244 (293)
T 3d4o_A          226 VTANV-LAEMP--SHTFVIDLA  244 (293)
T ss_dssp             BCHHH-HHHSC--TTCEEEECS
T ss_pred             hCHHH-HHhcC--CCCEEEEec
Confidence            33322 67788  899999885

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.02  E-value=0.003  Score=56.23  Aligned_cols=76  Identities=18%  Similarity=0.352  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCee---eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLV---IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v---~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++. . +...+++....   .|..+.+..+.+.     ..+++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999996643 2 34445554322   3444433322222     23689999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |+++|.
T Consensus       106 v~nAg~  111 (277)
T 4dqx_A          106 VNNAGF  111 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.01  E-value=0.0031  Score=55.37  Aligned_cols=76  Identities=18%  Similarity=0.326  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCC--ee--eeCCChHHHHH----H-hcC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPN--LV--IDYNEPEAMHS----I-AGA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~--~v--~~~~~~~~~~~----i-~~~  251 (383)
                      +|++++|+||+|  ++|+++++.+...|++|+.+.++++ .+    .+++++..  ..  .|..+.+-.+.    + .+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            689999999876  8999999999999999999996642 22    33444432  22  34444332222    2 234


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++++++|.
T Consensus        85 G~iD~lvnnAg~   96 (256)
T 4fs3_A           85 GNIDGVYHSIAF   96 (256)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEecccc
Confidence            789999999885

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.00  E-value=0.0021  Score=60.29  Aligned_cols=90  Identities=16%  Similarity=0.066  Sum_probs=65.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.|++|+|.| .|.+|..+++.++.+|++|+++..+. +...+...|.. +.+     +.+.+   ...|+|+.++|...
T Consensus       245 L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~-vv~-----LeElL---~~ADIVv~atgt~~  314 (464)
T 3n58_A          245 MAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFE-VVT-----LDDAA---STADIVVTTTGNKD  314 (464)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-ECC-----HHHHG---GGCSEEEECCSSSS
T ss_pred             ccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCce-ecc-----HHHHH---hhCCEEEECCCCcc
Confidence            4899999999 99999999999999999999988543 33334445543 221     33322   35899999998776


Q ss_pred             ccccccccccccCCCceEEEecC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ......++.|+  +++.++.++.
T Consensus       315 lI~~e~l~~MK--~GAILINvGR  335 (464)
T 3n58_A          315 VITIDHMRKMK--DMCIVGNIGH  335 (464)
T ss_dssp             SBCHHHHHHSC--TTEEEEECSS
T ss_pred             ccCHHHHhcCC--CCeEEEEcCC
Confidence            53333378888  9999998864

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.99  E-value=0.0033  Score=55.27  Aligned_cols=76  Identities=16%  Similarity=0.299  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      .++++||+||+|++|..+++.+...|++|++++++.. . +...+++... .  .|..+.+..+.+    . ..+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6789999999999999999998899999999986643 2 3445555332 1  344443322222    2 24689999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |+++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999986

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.98  E-value=0.0034  Score=56.22  Aligned_cols=76  Identities=20%  Similarity=0.410  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHHHHH-hcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAMHSI-AGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~~~i-~~~~g~d~v~d~~  261 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++.. . +..++++... .  .|..+.+....+ .+.+++|++|+++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA   94 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA   94 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence            6789999999999999999999999999999997643 3 3444554321 1  344444333333 3346899999999


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        95 g~   96 (291)
T 3rd5_A           95 GI   96 (291)
T ss_dssp             CC
T ss_pred             cC
Confidence            85

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.98  E-value=0.0038  Score=54.91  Aligned_cols=76  Identities=20%  Similarity=0.280  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH---HHHhcCCC-ee--eeCCChHHHHHH-----hcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD---LVTSLNPN-LV--IDYNEPEAMHSI-----AGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~---~~~~lg~~-~v--~~~~~~~~~~~i-----~~~~g~d  255 (383)
                      +|+++||+||++++|.++++.+...|++|+..++++ +.+   ...+.+.. ..  .|..+.+-.+.+     .+.+++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            789999999999999999999889999999998653 322   22333432 12  344444322222     2347899


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++++++|.
T Consensus        86 iLVNnAGi   93 (258)
T 4gkb_A           86 GLVNNAGV   93 (258)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999986

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.98  E-value=0.0028  Score=56.06  Aligned_cols=77  Identities=19%  Similarity=0.399  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++ +. +.+++++....   .|..+....+.+.     ..+++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            678999999999999999999999999999998664 33 34455664422   2444433332222     23689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus       106 vnnAg~~  112 (266)
T 3grp_A          106 VNNAGIT  112 (266)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999863

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.95  E-value=0.0019  Score=61.50  Aligned_cols=89  Identities=17%  Similarity=0.101  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .|++++|+| +|++|.++++.++..|++|+++.++. +...+...+++ +.+.     .+   ....+|+++++.|....
T Consensus       264 ~GKtVvVtG-aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~l-----ee---~~~~aDvVi~atG~~~v  333 (488)
T 3ond_A          264 AGKVAVVAG-YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTL-----ED---VVSEADIFVTTTGNKDI  333 (488)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCG-----GG---TTTTCSEEEECSSCSCS
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCH-----HH---HHHhcCEEEeCCCChhh
Confidence            789999999 67999999999999999999988654 44445555542 2111     11   12369999999998765


Q ss_pred             cccccccccccCCCceEEEecC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .....++.++  +++.++.++.
T Consensus       334 l~~e~l~~mk--~gaiVvNaG~  353 (488)
T 3ond_A          334 IMLDHMKKMK--NNAIVCNIGH  353 (488)
T ss_dssp             BCHHHHTTSC--TTEEEEESSS
T ss_pred             hhHHHHHhcC--CCeEEEEcCC
Confidence            4432377888  8998888764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.94  E-value=0.0036  Score=55.45  Aligned_cols=77  Identities=19%  Similarity=0.304  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .+++++|+||+|++|.++++.+...|++|+++++++ +. +..++++....   .|..+.+..+.+.     ..+++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999999654 33 34455553321   3544433322222     23689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus        90 v~nAg~~   96 (271)
T 3tzq_B           90 DNNAAHS   96 (271)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.93  E-value=0.0028  Score=56.45  Aligned_cols=77  Identities=18%  Similarity=0.274  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++. . +...+++.. ..  .|..+.+..+.+    . ..+++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6789999999999999999998889999999997643 3 344555533 12  354554332222    2 23689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus       108 vnnAg~~  114 (277)
T 3gvc_A          108 VANAGVV  114 (277)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999863

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.93  E-value=0.0029  Score=54.82  Aligned_cols=75  Identities=21%  Similarity=0.338  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChH---HHHHHh-cCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPE---AMHSIA-GAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~---~~~~i~-~~~g~d~v~d~~g~  263 (383)
                      +++++|+||+|++|.++++.+...|++|++++++.+. ..++++...+ .|..+.+   +.+.+. ..+++|++|+++|.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag~   80 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAV   80 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            4689999999999999999999999999999976543 3334453211 2333322   222222 23689999999985


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        81 ~   81 (239)
T 2ekp_A           81 N   81 (239)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.92  E-value=0.0026  Score=55.77  Aligned_cols=77  Identities=21%  Similarity=0.378  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++++ . +..++++... .  .|..+.+..+.+    . ..+++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6789999999999999999999999999999997643 3 3334444321 1  344443322222    2 23689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus        87 v~nAg~~   93 (255)
T 4eso_A           87 HINAGVS   93 (255)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.92  E-value=0.0041  Score=54.61  Aligned_cols=76  Identities=20%  Similarity=0.295  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCee---eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLV---IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      .+++++|+||++++|.++++.+...|++|+++++++. . +..++++....   .|..+.+..+.+    . ..+++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5789999999999999999999999999999997643 3 34455554322   344443322222    2 23589999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999985

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.90  E-value=0.0043  Score=54.19  Aligned_cols=75  Identities=28%  Similarity=0.372  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeee-eCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVI-DYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      -.+++++|+||+|++|..+++.+...|++|+++++++  +.+++++...++ |. ..+....+....++|++|+++|..
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~D~-~~~~~~~~~~~~~iD~lv~~Ag~~   92 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--ELLKRSGHRYVVCDL-RKDLDLLFEKVKEVDILVLNAGGP   92 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHTCSEEEECCT-TTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--HHHHhhCCeEEEeeH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence            4678999999999999999999988999999998764  223344422222 22 122222223334899999999853

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.90  E-value=0.003  Score=55.42  Aligned_cols=77  Identities=18%  Similarity=0.238  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-ee--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LV--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .++++||+||++++|.++++.+...|++|+++++++ +. +..++++.. ..  .|..+.+..+.+.     ..+++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            678999999999999999999999999999998654 32 334444432 12  3444433222222     23689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus        86 v~nAg~~   92 (257)
T 3tpc_A           86 VNCAGTA   92 (257)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999854

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.90  E-value=0.004  Score=53.10  Aligned_cols=97  Identities=12%  Similarity=0.117  Sum_probs=59.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLK-AWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~-~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ++|+|+||+|++|..+++.+. ..|++|++++++.. . +.+...+.. .+  .|..+.+....+.  .++|++|.++|.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~vv~~ag~   83 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAV--TNAEVVFVGAME   83 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHH--TTCSEEEESCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHH--cCCCEEEEcCCC
Confidence            579999999999999988887 89999999997644 2 222111211 22  2444433222222  479999999987


Q ss_pred             CcccccccccccccCCCceEEEecC
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .......+++.+.....+++|.+++
T Consensus        84 ~n~~~~~~~~~~~~~~~~~iv~iSs  108 (221)
T 3r6d_A           84 SGSDMASIVKALSRXNIRRVIGVSM  108 (221)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CChhHHHHHHHHHhcCCCeEEEEee
Confidence            4322111244444223468888754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.89  E-value=0.0076  Score=52.13  Aligned_cols=76  Identities=26%  Similarity=0.361  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCCee--eeCCChHHHHHHh-cCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPNLV--IDYNEPEAMHSIA-GAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~~v--~~~~~~~~~~~i~-~~~g~d~v~d~~g  262 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++.. .+ ..++.....+  .|..+.+..+.+. +.+++|++|+++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5789999999999999999999989999999987643 22 3333322222  3444443333333 3457999999998


Q ss_pred             C
Q psy9949         263 I  263 (383)
Q Consensus       263 ~  263 (383)
                      .
T Consensus        86 ~   86 (244)
T 1cyd_A           86 L   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            4

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.89  E-value=0.003  Score=56.02  Aligned_cols=77  Identities=22%  Similarity=0.337  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHHHHh-----cCCCccE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMHSIA-----GAGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~d~  256 (383)
                      ..++++||+||+|++|.+++..+...|++|++++++.. . +.+.+++.. ..  .|..+.+..+.+.     ..+++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36789999999999999999999999999999987643 3 344455432 22  3444433332222     2368999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|+++|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999986

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.89  E-value=0.0037  Score=54.76  Aligned_cols=77  Identities=23%  Similarity=0.282  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++++ . +..++++... .  .|..+.+-.+.+.     ..+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999987643 3 3344444321 1  3444433222221     23589999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus        84 v~nAg~~   90 (254)
T 1hdc_A           84 VNNAGIS   90 (254)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=96.89  E-value=0.0026  Score=56.77  Aligned_cols=93  Identities=17%  Similarity=0.221  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH----hcCCCee--eeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT----SLNPNLV--IDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~----~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      +++++||..| +|..|..++.+|+..|++|++++.+ +..+.++    +.|.+++  +..+..++    . ...||+|+.
T Consensus       121 ~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l----~-d~~FDvV~~  194 (298)
T 3fpf_A          121 RRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI----D-GLEFDVLMV  194 (298)
T ss_dssp             CTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG----G-GCCCSEEEE
T ss_pred             CCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC----C-CCCcCEEEE
Confidence            8999999999 8887888888888889999999955 4444443    3454433  33332222    1 367999997


Q ss_pred             cCCCCc--ccccccccccccCCCceEEEec
Q psy9949         260 AAGIPL--DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       260 ~~g~~~--~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      +...+.  .....+.+.++  |+|+++...
T Consensus       195 ~a~~~d~~~~l~el~r~Lk--PGG~Lvv~~  222 (298)
T 3fpf_A          195 AALAEPKRRVFRNIHRYVD--TETRIIYRT  222 (298)
T ss_dssp             CTTCSCHHHHHHHHHHHCC--TTCEEEEEE
T ss_pred             CCCccCHHHHHHHHHHHcC--CCcEEEEEc
Confidence            665432  11222367889  999998764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.88  E-value=0.0034  Score=50.49  Aligned_cols=77  Identities=13%  Similarity=0.215  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHH-hcCCCeeeeCCChHHHHHHhc--CCCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVT-SLNPNLVIDYNEPEAMHSIAG--AGPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~-~lg~~~v~~~~~~~~~~~i~~--~~g~d~v~d~~g  262 (383)
                      .++++|+|.| +|.+|..+++.++..|.+|+++++++ +.+.++ +.|.. ++..+..+ .+.+.+  ..++|+||.+++
T Consensus        17 ~~~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~~-~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           17 QKSKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAAE-FETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTTS-HHHHHTTTGGGCSEEEECSS
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCCC-HHHHHHcCcccCCEEEEEeC
Confidence            5778999999 79999999999999999999998654 445555 56654 33222211 123333  247999999999


Q ss_pred             CCcc
Q psy9949         263 IPLD  266 (383)
Q Consensus       263 ~~~~  266 (383)
                      ....
T Consensus        94 ~~~~   97 (155)
T 2g1u_A           94 DDST   97 (155)
T ss_dssp             CHHH
T ss_pred             CcHH
Confidence            8654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.86  E-value=0.0042  Score=55.33  Aligned_cols=76  Identities=21%  Similarity=0.240  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCee---eeCCChHHHH----HHh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLV---IDYNEPEAMH----SIA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v---~~~~~~~~~~----~i~-~~~g~d~v  257 (383)
                      .++++||+||++++|.++++.+...|++|++++++.+ . +...+++....   .|..+.+-.+    ++. ..+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5789999999999999999999999999999997643 3 33445554322   2444433222    222 23689999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |+++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999985

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.86  E-value=0.0036  Score=54.62  Aligned_cols=77  Identities=21%  Similarity=0.312  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe--e--eeCCChHHHHHH----hcCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL--V--IDYNEPEAMHSI----AGAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~--v--~~~~~~~~~~~i----~~~~g~d~v  257 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. . +..++++...  .  .|..+.+..+.+    .+.+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            5689999999999999999999889999999997643 2 2333443221  1  344443322222    223689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.++|..
T Consensus        90 i~~Ag~~   96 (254)
T 2wsb_A           90 VNSAGIA   96 (254)
T ss_dssp             EECCCCC
T ss_pred             EECCccC
Confidence            9999853

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.85  E-value=0.0041  Score=54.44  Aligned_cols=76  Identities=24%  Similarity=0.382  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHH---HhcCCCee---eeCCChHHHHHHh-----cCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLV---TSLNPNLV---IDYNEPEAMHSIA-----GAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~---~~lg~~~v---~~~~~~~~~~~i~-----~~~g~d~  256 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++...+..   .+.+....   .|..+.+..+.+.     ..+++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999998899999999865433222   23343321   2444433222221     2358999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|+++|.
T Consensus        83 lv~~Ag~   89 (255)
T 2q2v_A           83 LVNNAGI   89 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.83  E-value=0.0032  Score=54.97  Aligned_cols=77  Identities=27%  Similarity=0.514  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC---eeeeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN---LVIDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~---~v~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      .+++++|+||+|++|.++++.+...|++|+++++++. . +..+.++..   ...|..+.+-.+.+    . +.+++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6789999999999999999999999999999997643 2 233333321   12355554332222    2 23689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus        88 v~nAg~~   94 (248)
T 3op4_A           88 VNNAGIT   94 (248)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.82  E-value=0.0052  Score=54.61  Aligned_cols=76  Identities=30%  Similarity=0.352  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCe-e--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNL-V--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .++++||+||+|++|..+++.+...|++|++++++. +. +...+++... .  .|..+.+..+.+.     ..+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            568999999999999999999999999999999664 33 3444454321 2  3444433322222     23589999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |.++|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.82  E-value=0.0054  Score=53.95  Aligned_cols=76  Identities=18%  Similarity=0.351  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .++++||+||+|++|..++..+...|++|++++++.. . +...++... ..  .|..+.+..+.+.     +.+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999987643 3 233444321 12  3444433222221     23589999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |+++|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.81  E-value=0.0037  Score=54.07  Aligned_cols=75  Identities=19%  Similarity=0.155  Sum_probs=51.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCC-ee--eeCCChHHHHHH----h-cCCCccEEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPN-LV--IDYNEPEAMHSI----A-GAGPYDVIL  258 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g~d~v~  258 (383)
                      ++++||+||+|++|.+++..+...|++|+++++++ +.+ ...+++.. ..  .|..+.+-.+.+    . ..+++|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            57899999999999999998888999999999764 332 33333321 11  344443322222    2 236899999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +++|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99986

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.81  E-value=0.0046  Score=54.56  Aligned_cols=77  Identities=21%  Similarity=0.365  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HH---HhcCCCee---eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LV---TSLNPNLV---IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~---~~lg~~~v---~~~~~~~~~~~i----~-~~~g~  254 (383)
                      .++++||+||+|++|.+++..+...|++|++++++. +.+ .+   ++.+....   .|..+.+..+.+    . ..+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999999999999999998764 322 22   23343211   354444332222    2 23689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus        83 D~lVnnAG~~   92 (264)
T 3tfo_A           83 DVLVNNAGVM   92 (264)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999863

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.81  E-value=0.0011  Score=58.16  Aligned_cols=73  Identities=25%  Similarity=0.310  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChH----HHHHHhc-CCCccEEEEcC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE----AMHSIAG-AGPYDVILDAA  261 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~----~~~~i~~-~~g~d~v~d~~  261 (383)
                      +-+++++|+||+|++|..+++.+...|++|++++++........+    .++..+.+    +.+.+.+ .+++|++|.++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSF----TIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEE----ECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccce----EEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            446899999999999999999999999999999966432111111    12333322    2223322 35799999999


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        96 g~   97 (251)
T 3orf_A           96 GG   97 (251)
T ss_dssp             CC
T ss_pred             cc
Confidence            84

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.80  E-value=0.0064  Score=53.24  Aligned_cols=76  Identities=21%  Similarity=0.293  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee--eeCCChHHHHHH-h----cCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV--IDYNEPEAMHSI-A----GAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v--~~~~~~~~~~~i-~----~~~g~d~v~d  259 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +.+..++++. ..  .|..+.+-.+.+ .    ..+++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999999999999999999988999999998654 3333344432 33  344443322222 1    2368999999


Q ss_pred             cCCCC
Q psy9949         260 AAGIP  264 (383)
Q Consensus       260 ~~g~~  264 (383)
                      ++|..
T Consensus        84 ~Ag~~   88 (256)
T 2d1y_A           84 NAAIA   88 (256)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99853

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.80  E-value=0.0052  Score=55.35  Aligned_cols=91  Identities=14%  Similarity=0.125  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.+++|+|.| .|.+|..+++.++.+|++|++.++.. +.+.+.++|.. ++++  .++.+.   ..+.|+|+.+++...
T Consensus       155 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~~l~~~---l~~aDvVi~~~p~~~  227 (300)
T 2rir_A          155 IHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHT--DELKEH---VKDIDICINTIPSMI  227 (300)
T ss_dssp             STTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEG--GGHHHH---STTCSEEEECCSSCC
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEch--hhHHHH---hhCCCEEEECCChhh
Confidence            3688999999 89999999999999999999998664 33445556653 3332  123222   247999999998754


Q ss_pred             ccccccccccccCCCceEEEec
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ..... ++.++  +++.++.++
T Consensus       228 i~~~~-~~~mk--~g~~lin~a  246 (300)
T 2rir_A          228 LNQTV-LSSMT--PKTLILDLA  246 (300)
T ss_dssp             BCHHH-HTTSC--TTCEEEECS
T ss_pred             hCHHH-HHhCC--CCCEEEEEe
Confidence            43322 67788  899999884

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.79  E-value=0.0067  Score=53.77  Aligned_cols=77  Identities=19%  Similarity=0.256  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHH---hcCCC-ee--eeCCChHHHHHH----hcCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVT---SLNPN-LV--IDYNEPEAMHSI----AGAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~---~lg~~-~v--~~~~~~~~~~~i----~~~~g~d~  256 (383)
                      .++++||+||+|++|.++++.+...|++|+++++.++. +.++   +.+.. ..  .|..+.+..+.+    .+.+++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            57899999999999999999999999999999866543 2222   23322 11  344443333222    23368999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|+++|..
T Consensus       110 lv~nAg~~  117 (273)
T 3uf0_A          110 LVNNAGII  117 (273)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999863

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.79  E-value=0.0066  Score=53.92  Aligned_cols=77  Identities=23%  Similarity=0.369  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++ +.+ .   +.+.+.. ..  .|..+.+..+.+.     +.+++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999654 222 2   2233332 22  3444433322222     23689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus       111 D~lvnnAg~~  120 (276)
T 3r1i_A          111 DIAVCNAGIV  120 (276)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999863

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.79  E-value=0.0063  Score=53.04  Aligned_cols=77  Identities=17%  Similarity=0.334  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-H-HHHHhcCCCe-e--eeCCChHHHHHH----h-cCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-K-DLVTSLNPNL-V--IDYNEPEAMHSI----A-GAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~-~~~~~lg~~~-v--~~~~~~~~~~~i----~-~~~g~d~  256 (383)
                      .+++++|+||+|++|..++..+...|++|++++++. . . +.+++.+... .  .|..+.+-.+.+    . ..+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999998999999998654 2 2 2334445331 1  344443322222    1 2368999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|+++|..
T Consensus        86 lv~nAg~~   93 (249)
T 2ew8_A           86 LVNNAGIY   93 (249)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.78  E-value=0.0062  Score=53.77  Aligned_cols=77  Identities=25%  Similarity=0.298  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh----cCCCee---eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS----LNPNLV---IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~----lg~~~v---~~~~~~~~~~~i~-----~~~g  253 (383)
                      .++++||+||+|++|..+++.+...|++|++++++.. . +...+    .+....   .|..+.+..+.+.     ..++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999987642 2 22222    243321   3444433222221     2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       100 iD~lvnnAg~~  110 (267)
T 1vl8_A          100 LDTVVNAAGIN  110 (267)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.78  E-value=0.0042  Score=55.86  Aligned_cols=78  Identities=27%  Similarity=0.450  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCCee----eeCCCh-HHH----HHHhc-C
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPNLV----IDYNEP-EAM----HSIAG-A  251 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~~v----~~~~~~-~~~----~~i~~-~  251 (383)
                      ..++++||+||+|++|..+++.+...|++|++++++.. . +.+.   +.+...+    .|..+. +..    +.+.+ .
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            46789999999999999999998889999999997653 2 2222   2232211    344443 322    22222 3


Q ss_pred             CCccEEEEcCCCC
Q psy9949         252 GPYDVILDAAGIP  264 (383)
Q Consensus       252 ~g~d~v~d~~g~~  264 (383)
                      +++|++|+++|..
T Consensus        90 g~iD~lv~nAg~~  102 (311)
T 3o26_A           90 GKLDILVNNAGVA  102 (311)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCCCEEEECCccc
Confidence            6899999999964

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.77  E-value=0.0051  Score=56.64  Aligned_cols=76  Identities=14%  Similarity=0.253  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--------H----HHHHhcCCCee---eeCCChHHHHHH----
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--------K----DLVTSLNPNLV---IDYNEPEAMHSI----  248 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--------~----~~~~~lg~~~v---~~~~~~~~~~~i----  248 (383)
                      .++++||+||++++|.+++..+...|++|++++++..        .    +.+++.+....   .|..+.+..+.+    
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            6789999999999999999999889999999996532        1    22233443211   355554333222    


Q ss_pred             h-cCCCccEEEEcCCC
Q psy9949         249 A-GAGPYDVILDAAGI  263 (383)
Q Consensus       249 ~-~~~g~d~v~d~~g~  263 (383)
                      . ..+++|++|+++|.
T Consensus       124 ~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          124 IKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2 23689999999985

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.77  E-value=0.0025  Score=56.85  Aligned_cols=76  Identities=22%  Similarity=0.276  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc---CC-C-ee--eeCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL---NP-N-LV--IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l---g~-~-~v--~~~~~~~~~~~----i~-~~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++. . +...++   +. . ..  .|..+.+-.+.    +. ..++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999999999999999899999999997643 2 222222   21 1 22  35555432222    22 2368


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.76  E-value=0.0065  Score=54.02  Aligned_cols=78  Identities=21%  Similarity=0.357  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCee---eeCCChHHHHH----Hh-cCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNLV---IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~v---~~~~~~~~~~~----i~-~~~g  253 (383)
                      ..++++||+||+|++|.+++..+...|++|++++++.. .+ .   +++.+....   .|..+.+-.+.    +. ..++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999988889999999997643 22 2   223343321   34444332222    22 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       102 id~lv~nAg~~  112 (279)
T 3sju_A          102 IGILVNSAGRN  112 (279)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECCCCC
Confidence            99999999863

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.76  E-value=0.0067  Score=54.58  Aligned_cols=77  Identities=18%  Similarity=0.245  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .++++||+||+|++|..++..+...|++|++++++.. .+ .   +++.+... .  .|..+.+..+.+.     ..+++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            6789999999999999999999999999999997643 22 2   22334331 1  3545533332222     13689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus       110 d~lvnnAg~~  119 (301)
T 3tjr_A          110 DVVFSNAGIV  119 (301)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCcC
Confidence            9999999853

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.76  E-value=0.0074  Score=54.02  Aligned_cols=76  Identities=14%  Similarity=0.278  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HH----HHHhcCCCee---eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++.  .+    ..++.+....   .|..+.+..+.+    . ..++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999999999999999999999999986543  22    2234454322   244443322222    2 2368


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus       126 iD~lvnnAg~  135 (291)
T 3ijr_A          126 LNILVNNVAQ  135 (291)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.76  E-value=0.0057  Score=53.88  Aligned_cols=76  Identities=24%  Similarity=0.413  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC-ee--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN-LV--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .+++++|+||+|++|.++++.+...|++|+++++++. . +..++++.. ..  .|..+.+..+.+.     ..+++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            5689999999999999999999999999999997643 3 334455422 11  3444433222221     23679999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |+++|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            999885

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.76  E-value=0.0024  Score=56.51  Aligned_cols=77  Identities=19%  Similarity=0.239  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCe-eeeCCChHHHHHH----h-cCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNL-VIDYNEPEAMHSI----A-GAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~-v~~~~~~~~~~~i----~-~~~g~d~v~d~  260 (383)
                      .++++||+||+|++|..++..+...|++|++++++.+ .+.+....... ..|..+....+.+    . ..+++|++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn   94 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNN   94 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            5689999999999999999999999999999987643 22211111111 1344443322222    1 23689999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus        95 Ag~~   98 (266)
T 3p19_A           95 AGMM   98 (266)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9863

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.76  E-value=0.006  Score=57.24  Aligned_cols=88  Identities=14%  Similarity=0.116  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .|++|+|.| .|.+|..+++.++.+|++|+++.++. +...+...|...+      ++.+.+   ...|+++.+.+....
T Consensus       210 ~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------sL~eal---~~ADVVilt~gt~~i  279 (436)
T 3h9u_A          210 AGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------LVEDVV---EEAHIFVTTTGNDDI  279 (436)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------CHHHHT---TTCSEEEECSSCSCS
T ss_pred             cCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------CHHHHH---hhCCEEEECCCCcCc
Confidence            689999999 99999999999999999999988654 3344555665321      233322   368999998887665


Q ss_pred             cccccccccccCCCceEEEec
Q psy9949         267 QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      .....++.|+  +++.++.++
T Consensus       280 I~~e~l~~MK--~gAIVINvg  298 (436)
T 3h9u_A          280 ITSEHFPRMR--DDAIVCNIG  298 (436)
T ss_dssp             BCTTTGGGCC--TTEEEEECS
T ss_pred             cCHHHHhhcC--CCcEEEEeC
Confidence            4433388888  998888875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.76  E-value=0.0058  Score=53.43  Aligned_cols=76  Identities=24%  Similarity=0.318  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh---c-C-CCee--eeC--CChHHHH----HHh-cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS---L-N-PNLV--IDY--NEPEAMH----SIA-GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~---l-g-~~~v--~~~--~~~~~~~----~i~-~~  251 (383)
                      .+++++|+||+|++|.++++.+...|++|+++++++. .+ ...+   . + ....  .|.  .+....+    .+. ..
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999998899999999997643 22 2222   1 2 1112  343  3332222    222 23


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++|+++|.
T Consensus        91 g~id~lv~nAg~  102 (252)
T 3f1l_A           91 PRLDGVLHNAGL  102 (252)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            679999999985

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.75  E-value=0.0054  Score=53.80  Aligned_cols=76  Identities=17%  Similarity=0.292  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh---cCCCe-e--eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS---LNPNL-V--IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~---lg~~~-v--~~~~~~~~~~~i----~-~~~g~  254 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++. .+ ...+   .+... .  .|..+.+-.+.+    . ..+++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999987643 22 2222   33221 1  344443322222    2 23689


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        85 d~lv~nAg~   93 (257)
T 3imf_A           85 DILINNAAG   93 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.75  E-value=0.005  Score=54.95  Aligned_cols=77  Identities=17%  Similarity=0.208  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--------H----HHHHhcCCCe-e--eeCCChHHHHH----H
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--------K----DLVTSLNPNL-V--IDYNEPEAMHS----I  248 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--------~----~~~~~lg~~~-v--~~~~~~~~~~~----i  248 (383)
                      .+++++|+||++++|.++++.+...|++|++++++..        .    +..++.+... .  .|..+.+-.+.    +
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            5789999999999999999999889999999996532        1    1222334321 1  24444332222    2


Q ss_pred             h-cCCCccEEEEcCCCC
Q psy9949         249 A-GAGPYDVILDAAGIP  264 (383)
Q Consensus       249 ~-~~~g~d~v~d~~g~~  264 (383)
                      . ..+++|++|+++|..
T Consensus        88 ~~~~g~id~lvnnAg~~  104 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAI  104 (285)
T ss_dssp             HHHHSCCSEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence            2 236899999999853

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.74  E-value=0.0053  Score=54.01  Aligned_cols=76  Identities=21%  Similarity=0.334  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCee----eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNLV----IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~v----~~~~~~~~~~~i----~-~~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|++++++.+ .+ .   +++.+...+    .|..+.+..+.+    . +.++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            6789999999999999999999999999999997643 22 2   223332112    244443332222    1 2368


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus        89 id~lvnnAg~   98 (262)
T 3pk0_A           89 IDVVCANAGV   98 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.73  E-value=0.0049  Score=54.02  Aligned_cols=75  Identities=23%  Similarity=0.333  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-e--eeCCChHHHH----HHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-V--IDYNEPEAMH----SIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v--~~~~~~~~~~----~i~~~~g~d~v~d~  260 (383)
                      .++++||+||++++|.++++.+...|++|+++++..+ +...+++... .  .|..+.+..+    .+.+.+++|++|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n   86 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE-DVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC   86 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH-HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH-HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence            5789999999999999999988888999999987432 3333444331 1  3444433222    22234689999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus        87 Ag~   89 (257)
T 3tl3_A           87 AGT   89 (257)
T ss_dssp             GGG
T ss_pred             CCC
Confidence            984

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.73  E-value=0.0067  Score=53.06  Aligned_cols=76  Identities=18%  Similarity=0.276  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HH---HhcCCCe-e--eeCCChHHHH----HHhcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LV---TSLNPNL-V--IDYNEPEAMH----SIAGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~---~~lg~~~-v--~~~~~~~~~~----~i~~~~g~d  255 (383)
                      .++++||+||+|++|.++++.+...|++|++++++. +.+ ..   ++.+... .  .|..+.+-.+    .+.+.+++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            678999999999999999999999999999999654 322 22   2334321 1  3444433222    222226899


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|+++|.
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999995

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.73  E-value=0.0062  Score=53.37  Aligned_cols=77  Identities=17%  Similarity=0.256  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCee---eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNLV---IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~  254 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++.+ .+ .   +++.+....   .|..+.+..+.+    . ..+++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6789999999999999999888888999999996643 22 2   223343321   344443332222    2 23689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus        91 d~lv~nAg~~  100 (256)
T 3gaf_A           91 TVLVNNAGGG  100 (256)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.72  E-value=0.0052  Score=52.17  Aligned_cols=93  Identities=18%  Similarity=0.287  Sum_probs=58.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCCcccc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIPLDQI  268 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~  268 (383)
                      +|+|+||+|.+|..+++.+...|.+|++++++... +.+. .+...+ .|..+.+.    ....++|+||.++|......
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~----~~~~~~d~vi~~ag~~~~~~   76 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL----SDLSDQNVVVDAYGISPDEA   76 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH----HHHTTCSEEEECCCSSTTTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh----hhhcCCCEEEECCcCCcccc
Confidence            69999999999999999999999999999976533 3222 232222 23322222    22357999999998742110


Q ss_pred             -------cccccccccCCCceEEEecC
Q psy9949         269 -------NSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       269 -------~~~~~~l~~~~~G~~v~~~~  288 (383)
                             .++++.+.....++++.+++
T Consensus        77 ~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           77 EKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             TSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             chHHHHHHHHHHHHHhcCCceEEEEec
Confidence                   11144444213468887754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.72  E-value=0.0081  Score=53.39  Aligned_cols=77  Identities=21%  Similarity=0.329  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-------------hH----HHHHhcCCCee---eeCCChHHHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-------------AK----DLVTSLNPNLV---IDYNEPEAMHS  247 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-------------~~----~~~~~lg~~~v---~~~~~~~~~~~  247 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++             +.    +..++.+....   .|..+.+-.+.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            678999999999999999999999999999998641             11    12233443322   24444332222


Q ss_pred             H----h-cCCCccEEEEcCCCC
Q psy9949         248 I----A-GAGPYDVILDAAGIP  264 (383)
Q Consensus       248 i----~-~~~g~d~v~d~~g~~  264 (383)
                      +    . ..+++|++|+++|..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~  110 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGIS  110 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCCC
Confidence            2    2 236899999999853

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.71  E-value=0.0089  Score=51.47  Aligned_cols=76  Identities=18%  Similarity=0.292  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH----hcCCCee---eeCCChHHHHHHhc-----CCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT----SLNPNLV---IDYNEPEAMHSIAG-----AGPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~----~lg~~~v---~~~~~~~~~~~i~~-----~~g~  254 (383)
                      +++++|+||+|++|..+++.+...|++|+.++++. +.+ ..+    ..+....   .|..+.+-.+.+.+     .+++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999764 222 222    3343322   24444433333322     2579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus        82 d~li~~Ag~~   91 (235)
T 3l77_A           82 DVVVANAGLG   91 (235)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCccc
Confidence            9999999863

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.71  E-value=0.0084  Score=53.07  Aligned_cols=77  Identities=22%  Similarity=0.304  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCCCe-e--eeCCChHHHHHH----h-cC-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNPNL-V--IDYNEPEAMHSI----A-GA-GP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~~~-v--~~~~~~~~~~~i----~-~~-~g  253 (383)
                      .+++++|+||+|++|.++++.+...|++|+++++++. .+ .++   +.+... .  .|..+.+-.+.+    . .. ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999997643 22 222   234331 1  344443322222    2 23 67


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       100 id~lv~nAg~~  110 (273)
T 1ae1_A          100 LNILVNNAGVV  110 (273)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECCCCC
Confidence            99999999863

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.71  E-value=0.0058  Score=53.43  Aligned_cols=77  Identities=26%  Similarity=0.334  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCe-e--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNL-V--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +. +..++++... .  .|..+.+..+.+.     ..+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            568999999999999999999988999999998664 32 3334444321 1  2444433222221     23679999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus        85 v~~Ag~~   91 (253)
T 1hxh_A           85 VNNAGIL   91 (253)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.69  E-value=0.0076  Score=52.95  Aligned_cols=76  Identities=20%  Similarity=0.325  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc----CCCe-e--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL----NPNL-V--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l----g~~~-v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ...++    +... .  .|..+.+-.+.+.     ..++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999989999999987643 22 22222    4321 1  3444433222221     2358


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.69  E-value=0.0063  Score=53.86  Aligned_cols=76  Identities=22%  Similarity=0.350  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .++++||+||+|++|.+++..+...|++|+++++++. .+    .+++.+.. ..  .|..+.+..+.+.     ..+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999899999999997643 22    22233322 11  3555533222222     23689


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus       107 D~lvnnAg~  115 (270)
T 3ftp_A          107 NVLVNNAGI  115 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.69  E-value=0.0092  Score=52.50  Aligned_cols=76  Identities=18%  Similarity=0.226  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCCee---eeCCChHHHHH----Hh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPNLV---IDYNEPEAMHS----IA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~~v---~~~~~~~~~~~----i~-~~~g~  254 (383)
                      .++++||+||++++|.++++.+...|++|++++++.. .+ .   +.+.+....   .|..+.+-.+.    +. ..+++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6789999999999999999999999999999997642 22 2   223343321   35455433222    22 23689


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        90 d~lv~nAg~   98 (264)
T 3ucx_A           90 DVVINNAFR   98 (264)
T ss_dssp             SEEEECCCS
T ss_pred             cEEEECCCC
Confidence            999999975

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.69  E-value=0.0082  Score=52.27  Aligned_cols=76  Identities=24%  Similarity=0.380  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++. +.+ ..+   +.+... .  .|..+.+..+.+.     ..+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999999998999999998664 322 222   234321 1  3444433322221     23689


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        86 d~lv~nAg~   94 (247)
T 2jah_A           86 DILVNNAGI   94 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.69  E-value=0.0038  Score=55.27  Aligned_cols=75  Identities=27%  Similarity=0.429  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHHHH----h-cCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMHSI----A-GAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~i----~-~~~g~d~v~d~  260 (383)
                      ..+++|||+||+|++|.++++.+...|++|+++++++....  . .... ..|..+.+..+.+    . ..+++|++|++
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n   88 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNN   88 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            47899999999999999999999889999999986643221  1 1111 1344443322222    2 23689999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus        89 Ag~~   92 (269)
T 3vtz_A           89 AGIE   92 (269)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9853

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.68  E-value=0.0083  Score=53.47  Aligned_cols=76  Identities=20%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHh---cCCCee---eeCCChHHHHH----Hh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTS---LNPNLV---IDYNEPEAMHS----IA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~---lg~~~v---~~~~~~~~~~~----i~-~~~g~  254 (383)
                      +++++||+||+|++|.++++.+...|++|++++++.. . +...+   .+....   .|..+.+..+.    +. ..+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6789999999999999999999999999999997643 2 22333   333221   34444332222    22 23689


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.68  E-value=0.0064  Score=53.45  Aligned_cols=77  Identities=22%  Similarity=0.337  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCC-ee--eeCCChHHHHHH----h-cCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPN-LV--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      -.++++||+||+|++|..++..+...|++|++++++.. .+ .   +.+.+.. .+  .|..+.+-...+    . ..+.
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            36789999999999999999988889999999997643 22 2   2233432 11  344443322222    2 2367


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999986

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.68  E-value=0.0079  Score=53.00  Aligned_cols=76  Identities=18%  Similarity=0.293  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc-----CCCe-e--eeCCChHHHHHHh-----cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL-----NPNL-V--IDYNEPEAMHSIA-----GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l-----g~~~-v--~~~~~~~~~~~i~-----~~~  252 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.+ .+ ..+++     +... .  .|..+.+..+.+.     ..+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999998889999999987642 22 22221     3321 1  3444433222221     236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|+++|.
T Consensus        92 ~id~lv~nAg~  102 (267)
T 1iy8_A           92 RIDGFFNNAGI  102 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            89999999985

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.68  E-value=0.0058  Score=54.81  Aligned_cols=76  Identities=22%  Similarity=0.387  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHh---cCCCee----eeCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTS---LNPNLV----IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~---lg~~~v----~~~~~~~~~~~----i~-~~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|++++++. +. +...+   .+...+    .|..+.+..+.    +. ..++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999664 32 22232   331222    34444332222    22 2368


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.68  E-value=0.0077  Score=52.84  Aligned_cols=76  Identities=22%  Similarity=0.281  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCCC-ee--eeCCChHHHHHHh-----cC-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNPN-LV--IDYNEPEAMHSIA-----GA-GP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~~-~v--~~~~~~~~~~~i~-----~~-~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.+ .+ .+.   +.+.. ..  .|..+.+-.+.+.     .. ++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999987643 22 222   22432 11  3444433222222     23 67


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus        88 id~lv~~Ag~   97 (260)
T 2ae2_A           88 LNILVNNAGI   97 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.68  E-value=0.0067  Score=52.74  Aligned_cols=77  Identities=17%  Similarity=0.255  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee--eeCCChHHHHHHh-cCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV--IDYNEPEAMHSIA-GAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v--~~~~~~~~~~~i~-~~~g~d~v~d~~g~  263 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+.+.++.....  .|..+.+..+++. ..+++|++|+++|.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~   84 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF   84 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence            5789999999999999999999989999999987642 222223321112  3555543333333 35689999999985


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        85 ~   85 (246)
T 2ag5_A           85 V   85 (246)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.68  E-value=0.0057  Score=54.46  Aligned_cols=76  Identities=24%  Similarity=0.320  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc---CCCee---eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL---NPNLV---IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l---g~~~v---~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .++++||+||+|++|.++++.+...|++|++++++.. . +..+++   +....   .|..+.+..+.+.     ..+++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6789999999999999999999999999999987643 2 233332   32211   2444433333222     23689


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        87 D~lvnnAg~   95 (280)
T 3tox_A           87 DTAFNNAGA   95 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.67  E-value=0.0075  Score=53.33  Aligned_cols=76  Identities=21%  Similarity=0.316  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCCee--eeCCChHHHHHHh-----cCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPNLV--IDYNEPEAMHSIA-----GAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~~v--~~~~~~~~~~~i~-----~~~g~d~v~  258 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++.. .+ ...++.....  .|..+.+-.+.+.     ..+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999987643 32 3334432222  3444433222221     236899999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +++|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99985

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.66  E-value=0.0083  Score=53.23  Aligned_cols=76  Identities=21%  Similarity=0.322  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCCCe-e--eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNPNL-V--IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~~~-v--~~~~~~~~~~~i----~-~~~g~  254 (383)
                      .+++++|+||+|++|..++..+...|++|++++++.. .+ ..+   +.+... .  .|..+.+..+.+    . ..+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999999999987642 22 222   234331 1  344443322222    1 23679


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.66  E-value=0.0057  Score=52.09  Aligned_cols=70  Identities=20%  Similarity=0.233  Sum_probs=48.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|.+|..++..+...|.+|++++++.. .+.+...+...+ .|..+.+.    ....++|+||.++|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~----~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE----ADLDSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH----HHHTTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH----hhcccCCEEEECCccC
Confidence            5999999999999999999989999999997643 332222333222 23332222    2235899999999873

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.66  E-value=0.0087  Score=51.97  Aligned_cols=77  Identities=25%  Similarity=0.349  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCe-e--eeCCChHHHH----HHhc-CCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNL-V--IDYNEPEAMH----SIAG-AGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~-v--~~~~~~~~~~----~i~~-~~g~  254 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+    .+++.+... .  .|..+.+..+    .+.+ .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999997643 22    223334332 1  3444433222    2222 3579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        84 d~li~~Ag~~   93 (247)
T 3lyl_A           84 DILVNNAGIT   93 (247)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.65  E-value=0.0099  Score=52.11  Aligned_cols=77  Identities=18%  Similarity=0.245  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCe-e--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNL-V--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +. +..++++... +  .|..+.+..+.+.     ..+++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            578999999999999999999999999999999653 33 3444555331 1  3444433222221     23589999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.++|..
T Consensus        91 i~~Ag~~   97 (265)
T 2o23_A           91 VNCAGIA   97 (265)
T ss_dssp             EECCCCC
T ss_pred             EECCccC
Confidence            9999853

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.65  E-value=0.0089  Score=53.02  Aligned_cols=76  Identities=18%  Similarity=0.235  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHH---HhcCCCe-e--eeCCChH----HHHHHhcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLV---TSLNPNL-V--IDYNEPE----AMHSIAGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~---~~lg~~~-v--~~~~~~~----~~~~i~~~~g~d  255 (383)
                      .+++++|+||++++|.++++.+...|++|+++++++ +. +..   .+.+... .  .|..+.+    +.+.+.+.+++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            678999999999999999999999999999999654 22 222   2334331 1  2433322    223333336899


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|+++|.
T Consensus       112 ~lvnnAg~  119 (275)
T 4imr_A          112 ILVINASA  119 (275)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.65  E-value=0.0082  Score=52.34  Aligned_cols=76  Identities=21%  Similarity=0.353  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCCC-ee--eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNPN-LV--IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~~-~v--~~~~~~~~~~~i----~-~~~g~  254 (383)
                      .++++||+||+|++|..+++.+...|++|++++++++ .+ ..+   +.+.. ..  .|..+.+..+.+    . ..+++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999997643 22 222   22322 11  344443322222    2 23589


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999986

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.64  E-value=0.0052  Score=53.62  Aligned_cols=73  Identities=19%  Similarity=0.233  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHh-----cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIA-----GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~-----~~~g~d~v~d~~  261 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++...   ++.+...+ .|..+.+..+.+.     +.+++|++|+++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~A   82 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA   82 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            56899999999999999999999999999999876432   12332211 3544433222221     236899999999


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        83 g~   84 (250)
T 2fwm_X           83 GI   84 (250)
T ss_dssp             CC
T ss_pred             Cc
Confidence            85

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.64  E-value=0.0051  Score=53.44  Aligned_cols=74  Identities=18%  Similarity=0.136  Sum_probs=51.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-e--cCch-HH-HHHhc-CCCeeeeCCC-hHHHHHHhc-CCCccEEEEc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTT-C--SGDA-KD-LVTSL-NPNLVIDYNE-PEAMHSIAG-AGPYDVILDA  260 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~-~--~~~~-~~-~~~~l-g~~~v~~~~~-~~~~~~i~~-~~g~d~v~d~  260 (383)
                      +++++|+||+|++|.++++.+...|++|+++ .  ++.. .+ ...++ +. .+.+..+ ..+.+.+.+ .+++|++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999998 5  6542 22 33444 32 2333333 234444433 4689999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus        80 Ag~   82 (244)
T 1zmo_A           80 DYI   82 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            984

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.64  E-value=0.0059  Score=53.32  Aligned_cols=77  Identities=19%  Similarity=0.309  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh---c--C--CCee--eeCCChHHHHH----Hh-c
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS---L--N--PNLV--IDYNEPEAMHS----IA-G  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~---l--g--~~~v--~~~~~~~~~~~----i~-~  250 (383)
                      ..++++||+||+|++|.++++.+...|++|++++++.. .+ ..++   .  +  ....  .|..+.+-.+.    +. .
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999888888999999997643 22 2222   1  2  1122  34444332222    22 2


Q ss_pred             CCCccEEEEcCCC
Q psy9949         251 AGPYDVILDAAGI  263 (383)
Q Consensus       251 ~~g~d~v~d~~g~  263 (383)
                      .+++|++|+++|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3689999999986

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.63  E-value=0.0073  Score=53.04  Aligned_cols=77  Identities=25%  Similarity=0.309  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-ee--eeCCChHHHHHHh-----cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LV--IDYNEPEAMHSIA-----GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~d~v  257 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +. +..+++... ..  .|..+.+..+.+.     ..+++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999998888999999998764 32 233333321 11  3444433222221     23589999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus        86 v~~Ag~~   92 (260)
T 1nff_A           86 VNNAGIL   92 (260)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.63  E-value=0.0098  Score=53.44  Aligned_cols=76  Identities=20%  Similarity=0.313  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------c-hH----HHHHhcCCCee---eeCCChHHHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG------------D-AK----DLVTSLNPNLV---IDYNEPEAMHS  247 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~------------~-~~----~~~~~lg~~~v---~~~~~~~~~~~  247 (383)
                      .++++||+||++++|.++++.+...|++|++++++            . +.    +.+++.+....   .|..+.+-.+.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            67899999999999999999999999999998854            1 11    12233444322   34444332222


Q ss_pred             H----h-cCCCccEEEEcCCC
Q psy9949         248 I----A-GAGPYDVILDAAGI  263 (383)
Q Consensus       248 i----~-~~~g~d~v~d~~g~  263 (383)
                      +    . ..+++|++|+++|.
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHhCCCCEEEECCCC
Confidence            2    2 23689999999985

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=96.63  E-value=0.0019  Score=57.46  Aligned_cols=98  Identities=17%  Similarity=0.181  Sum_probs=60.5

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecC-chHHHHH----hcCC-CeeeeCCChHHHHHHhc
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSG-DAKDLVT----SLNP-NLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~-~~~~~~~----~lg~-~~v~~~~~~~~~~~i~~  250 (383)
                      ...+    +++++||-.| +|. |..++.+++..  +.+|++++.+ +..+.++    ..+. +.+- ....++.+. ..
T Consensus       107 ~~~~----~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~~-~~  178 (277)
T 1o54_A          107 MLDV----KEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVT-IKVRDISEG-FD  178 (277)
T ss_dssp             HTTC----CTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEE-EECCCGGGC-CS
T ss_pred             HhCC----CCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEE-EEECCHHHc-cc
Confidence            4566    8899999998 565 88999999985  4599999854 4444433    3453 2221 111112111 12


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .+.+|+|+.....+......+.++++  ++|+++..
T Consensus       179 ~~~~D~V~~~~~~~~~~l~~~~~~L~--pgG~l~~~  212 (277)
T 1o54_A          179 EKDVDALFLDVPDPWNYIDKCWEALK--GGGRFATV  212 (277)
T ss_dssp             CCSEEEEEECCSCGGGTHHHHHHHEE--EEEEEEEE
T ss_pred             CCccCEEEECCcCHHHHHHHHHHHcC--CCCEEEEE
Confidence            24699999866554332222267888  99999876

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.62  E-value=0.0084  Score=53.22  Aligned_cols=75  Identities=20%  Similarity=0.279  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHH----HHHhcCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAM----HSIAGAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~----~~i~~~~g~d~v~  258 (383)
                      .++++||+||++++|.++++.+...|++|++++++.. . +...+++... +  .|..+.+-.    +.+.+.+++|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            6789999999999999999998889999999997643 3 3445555432 1  344443322    2332335799999


Q ss_pred             EcCC
Q psy9949         259 DAAG  262 (383)
Q Consensus       259 d~~g  262 (383)
                      .+.+
T Consensus       109 ~~aa  112 (281)
T 3ppi_A          109 VAHG  112 (281)
T ss_dssp             ECCC
T ss_pred             EccC
Confidence            9843

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.62  E-value=0.0095  Score=53.00  Aligned_cols=77  Identities=17%  Similarity=0.276  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HH-H---HHhcCCCee---eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KD-L---VTSLNPNLV---IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~-~---~~~lg~~~v---~~~~~~~~~~~i----~-~~~g  253 (383)
                      ++++++|+||+|++|.++++.+...|++|++++++..  .+ .   +++.+....   .|..+......+    . ..++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999986542  12 1   233443321   244443322222    1 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       108 iD~lv~~Ag~~  118 (283)
T 1g0o_A          108 LDIVCSNSGVV  118 (283)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.61  E-value=0.0071  Score=53.56  Aligned_cols=77  Identities=17%  Similarity=0.273  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHH---HhcCCCee---eeCCChHHHHH----Hh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLV---TSLNPNLV---IDYNEPEAMHS----IA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~---~~lg~~~v---~~~~~~~~~~~----i~-~~~g~  254 (383)
                      .++++||+||+|++|.++++.+...|++|++++++.. . +.+   ++.+....   .|..+.+....    +. ..+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            6789999999999999999999999999999886642 2 222   23343322   24444332222    22 23579


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus       105 D~lv~nAg~~  114 (271)
T 4ibo_A          105 DILVNNAGIQ  114 (271)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.61  E-value=0.0057  Score=54.31  Aligned_cols=76  Identities=22%  Similarity=0.280  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc---CCCee--eeCCChHHHHHH----h-cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL---NPNLV--IDYNEPEAMHSI----A-GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l---g~~~v--~~~~~~~~~~~i----~-~~~g~d  255 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++.. . +.++++   +....  .|..+.+..+.+    . ..+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999999999987643 2 223332   21111  244443322222    2 236899


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|+++|.
T Consensus       108 ~lvnnAg~  115 (276)
T 2b4q_A          108 ILVNNAGT  115 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.61  E-value=0.0059  Score=50.46  Aligned_cols=77  Identities=25%  Similarity=0.262  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc-hHHHHHhcCCCeee-eCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD-AKDLVTSLNPNLVI-DYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~-~~~~~~~lg~~~v~-~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      +++|+|.| .|.+|..+++.++.. |.+|+++++++ +.+.+++.|...+. |..+.+.........++|++|.+++...
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~  117 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQ  117 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence            56899999 899999999999998 99999999664 45666777876443 4443332211101357999999998754


Q ss_pred             c
Q psy9949         266 D  266 (383)
Q Consensus       266 ~  266 (383)
                      .
T Consensus       118 ~  118 (183)
T 3c85_A          118 G  118 (183)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.60  E-value=0.011  Score=52.72  Aligned_cols=76  Identities=25%  Similarity=0.346  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----------------c-hHH----HHHhcCCCee---eeCCChH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----------------D-AKD----LVTSLNPNLV---IDYNEPE  243 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----------------~-~~~----~~~~lg~~~v---~~~~~~~  243 (383)
                      .+++++|+||++++|.++++.+...|++|++++++                . +.+    ..++.+....   .|..+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            67899999999999999999999999999998754                1 111    1223343321   3445443


Q ss_pred             HHHHH----h-cCCCccEEEEcCCC
Q psy9949         244 AMHSI----A-GAGPYDVILDAAGI  263 (383)
Q Consensus       244 ~~~~i----~-~~~g~d~v~d~~g~  263 (383)
                      ..+.+    . ..+++|++|+++|.
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcc
Confidence            33222    2 23689999999985

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.60  E-value=0.0084  Score=52.88  Aligned_cols=77  Identities=17%  Similarity=0.298  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcC-CCee----eeCCChHHHHHH-hcCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLN-PNLV----IDYNEPEAMHSI-AGAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg-~~~v----~~~~~~~~~~~i-~~~~g~d~  256 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++. . +.++   +.+ ...+    .|..+....+++ .+.+++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            5789999999999999999998889999999996642 2 2222   222 1111    244444333333 34568999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|+++|..
T Consensus        89 lv~nAg~~   96 (267)
T 3t4x_A           89 LINNLGIF   96 (267)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999853

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.59  E-value=0.0086  Score=53.14  Aligned_cols=76  Identities=17%  Similarity=0.274  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHH----hcCCCe-e--eeCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT----SLNPNL-V--IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~----~lg~~~-v--~~~~~~~~~~~----i~-~~~g  253 (383)
                      .++++||+||++++|.++++.+...|++|++++++.. . +.+.    ..+... .  .|..+.+..+.    +. ..++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999999999999999999999999997642 2 2222    234331 1  34444432222    22 2368


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus       106 id~lv~nAg~  115 (277)
T 4fc7_A          106 IDILINCAAG  115 (277)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcC
Confidence            9999999984

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.59  E-value=0.0027  Score=54.39  Aligned_cols=65  Identities=18%  Similarity=0.312  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHH-hcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSI-AGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i-~~~~g~d~v~d~~g~~  264 (383)
                      .+++++|+||++++|.++++.+...|++|++++++..            .|..+.+..+++ .+.+++|++|+++|..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            5789999999999999999988888999999986643            233343323222 2346799999999853

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.59  E-value=0.013  Score=51.82  Aligned_cols=76  Identities=24%  Similarity=0.344  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHH----HHHhcCCCee---eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|+++++..  +.+    .+++.+....   .|..+.+..+.+    . ..++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999987443  222    2233454322   344443322222    1 2368


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus       110 iD~lvnnAg~  119 (271)
T 3v2g_A          110 LDILVNSAGI  119 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999985

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.58  E-value=0.0095  Score=52.26  Aligned_cols=77  Identities=22%  Similarity=0.363  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecCch-H-HH---HHhcCCCee---eeCCChHHHHHH----h-cCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT-CSGDA-K-DL---VTSLNPNLV---IDYNEPEAMHSI----A-GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~-~~~~~-~-~~---~~~lg~~~v---~~~~~~~~~~~i----~-~~~  252 (383)
                      .+++++||+||+|++|.++++.+...|++|+++ .+++. . +.   +++.+....   .|..+.+-.+.+    . ..+
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999987 45432 2 22   233443322   244443322222    2 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|+++|.
T Consensus        82 ~id~lv~nAg~   92 (258)
T 3oid_A           82 RLDVFVNNAAS   92 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999985

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.57  E-value=0.011  Score=52.51  Aligned_cols=77  Identities=23%  Similarity=0.261  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------c-hHH----HHHhcCCCee---eeCCChHHHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG------------D-AKD----LVTSLNPNLV---IDYNEPEAMHS  247 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~------------~-~~~----~~~~lg~~~v---~~~~~~~~~~~  247 (383)
                      .++++||+||+|++|..+++.+...|++|++++++            . +.+    .....+....   .|..+..-.++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            67899999999999999999999999999998854            1 111    1223343321   34444332222


Q ss_pred             H----h-cCCCccEEEEcCCCC
Q psy9949         248 I----A-GAGPYDVILDAAGIP  264 (383)
Q Consensus       248 i----~-~~~g~d~v~d~~g~~  264 (383)
                      +    . +.+++|++|+++|..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~  110 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGIC  110 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcC
Confidence            2    2 236899999999863

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.57  E-value=0.0067  Score=53.46  Aligned_cols=72  Identities=26%  Similarity=0.365  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHHHHh-----cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMHSIA-----GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~i~-----~~~g~d~v~d~~  261 (383)
                      .++++||+||+|++|..+++.+...|++|++++++...    ...... ..|..+.+..+.+.     ..+++|++|+++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A   82 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA   82 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            56899999999999999999999999999999865432    111111 13444433222221     236899999999


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus        83 g~   84 (264)
T 2dtx_A           83 GI   84 (264)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.57  E-value=0.0092  Score=52.85  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--------H-HHH---HhcCCCe---eeeCCChHHHHH----H
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--------K-DLV---TSLNPNL---VIDYNEPEAMHS----I  248 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--------~-~~~---~~lg~~~---v~~~~~~~~~~~----i  248 (383)
                      .+++++|+||++++|.++++.+...|++|++++++..        . +..   +..+...   ..|..+.+-.+.    +
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            6789999999999999999998889999999986532        1 111   2233321   134444433222    2


Q ss_pred             hc-CCCccEEEEcCCC
Q psy9949         249 AG-AGPYDVILDAAGI  263 (383)
Q Consensus       249 ~~-~~g~d~v~d~~g~  263 (383)
                      .+ .+++|++|+++|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            22 3689999999985

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.56  E-value=0.011  Score=51.76  Aligned_cols=76  Identities=21%  Similarity=0.337  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h--HH-HHHh---cCCCe-e--eeCCChHHHHHH----h-cCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A--KD-LVTS---LNPNL-V--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~--~~-~~~~---lg~~~-v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      +++++|+||+|++|..+++.+...|++|++++++. +  .+ ..++   .+... .  .|..+.+..+.+    . ..++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999988888899999998654 3  22 2222   23321 1  344443322222    1 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        82 iD~lv~nAg~~   92 (258)
T 3a28_C           82 FDVLVNNAGIA   92 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.56  E-value=0.01  Score=52.66  Aligned_cols=78  Identities=21%  Similarity=0.322  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-------------Cc-hHH----HHHhcCCCee---eeCCChHHH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-------------GD-AKD----LVTSLNPNLV---IDYNEPEAM  245 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-------------~~-~~~----~~~~lg~~~v---~~~~~~~~~  245 (383)
                      -.+++++|+||++++|.++++.+...|++|+++++             ++ +.+    .+++.+....   .|..+.+-.
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            36789999999999999999999999999999875             21 221    2223443322   355544333


Q ss_pred             HHHh-----cCCCccEEEEcCCCC
Q psy9949         246 HSIA-----GAGPYDVILDAAGIP  264 (383)
Q Consensus       246 ~~i~-----~~~g~d~v~d~~g~~  264 (383)
                      +++.     ..+++|++|+++|..
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~  116 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVL  116 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC
Confidence            2222     236899999999863

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.56  E-value=0.0031  Score=54.56  Aligned_cols=98  Identities=20%  Similarity=0.201  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchH-HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAK-DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .++|||+||+|++|..+++.+...| ++|++++++... +.....+...+ .|..+.+....+.  .++|++|.++|...
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~vv~~a~~~~  100 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAM--QGQDIVYANLTGED  100 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHH--TTCSEEEEECCSTT
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHh--cCCCEEEEcCCCCc
Confidence            3689999999999999999999999 799999976432 21111122211 3444433333222  47899999998754


Q ss_pred             ccc--cccccccccCCCceEEEecC
Q psy9949         266 DQI--NSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       266 ~~~--~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ...  .++++.+.....+++|.+++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A          101 LDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             hhHHHHHHHHHHHHcCCCEEEEEec
Confidence            321  11144444223468988864

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.56  E-value=0.0099  Score=52.31  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCee--eeCCChHHHHH----Hh-cCC
Q psy9949         187 PRDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMHS----IA-GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~~----i~-~~~  252 (383)
                      .++++|||+||+  +++|..+++.+...|++|++++++++ .+    +..+.+...+  .|..+.+-.+.    +. ..+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            468899999998  99999999999889999999986643 22    2234443222  34444332222    22 236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus        92 ~id~lv~nAg~~  103 (271)
T 3ek2_A           92 SLDGLVHSIGFA  103 (271)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            899999999853

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.55  E-value=0.012  Score=51.14  Aligned_cols=76  Identities=25%  Similarity=0.355  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCC--Ceee--eC--CChHHH----HHHhc-C
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNP--NLVI--DY--NEPEAM----HSIAG-A  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~--~~v~--~~--~~~~~~----~~i~~-~  251 (383)
                      .+++++|+||+|++|..+++.+...|++|+++++++. .+    .+++.+.  ..++  +.  .+.+-.    +.+.+ .
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999999997642 22    2223332  1222  33  232222    22222 3


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++|.++|.
T Consensus        93 g~id~lv~nAg~  104 (247)
T 3i1j_A           93 GRLDGLLHNASI  104 (247)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            689999999985

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.55  E-value=0.01  Score=52.77  Aligned_cols=76  Identities=20%  Similarity=0.240  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-H---HHHhcCCC--ee----eeCCChHHHHHH----h-cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-D---LVTSLNPN--LV----IDYNEPEAMHSI----A-GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~---~~~~lg~~--~v----~~~~~~~~~~~i----~-~~  251 (383)
                      .++++||+||+|++|.++++.+...|++|+++++++. . +   .+++.+..  .+    .|..+.+-.+.+    . ..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999899999999986643 2 2   22333331  22    244443322222    2 23


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++|+++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            689999999986

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.55  E-value=0.011  Score=50.84  Aligned_cols=76  Identities=25%  Similarity=0.323  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCee--eeCCChHHHHHH----h-cCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLV--IDYNEPEAMHSI----A-GAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v--~~~~~~~~~~~i----~-~~~g~d~v~  258 (383)
                      .+++++|+||+|++|..++..+...|++|++++++. +.+ ...+++....  .|..+.+-.+.+    . ..+++|++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            457899999999999999999988999999999764 332 3344432222  344443322222    1 125899999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +++|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99985

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.55  E-value=0.011  Score=52.13  Aligned_cols=77  Identities=22%  Similarity=0.334  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HH----HHHhcCCCe-e--eeCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KD----LVTSLNPNL-V--IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~----~~~~lg~~~-v--~~~~~~~~~~~----i~-~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|+++++.. + .+    ..++.+... +  .|..+..-..+    +. ..++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999998889999999999743 2 12    223344332 2  24444332222    22 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus       108 id~li~nAg~~  118 (271)
T 4iin_A          108 LSYLVNNAGVV  118 (271)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999863

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.54  E-value=0.011  Score=52.46  Aligned_cols=77  Identities=19%  Similarity=0.373  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-------------c-hH-H---HHHhcCCCee---eeCCChHHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-------------D-AK-D---LVTSLNPNLV---IDYNEPEAMH  246 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-------------~-~~-~---~~~~lg~~~v---~~~~~~~~~~  246 (383)
                      .++++||+||++++|.++++.+...|++|+++++.             . +. +   .....+....   .|..+.+-..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            67899999999999999999999999999998752             1 11 1   1223343321   3444433222


Q ss_pred             HH----h-cCCCccEEEEcCCCC
Q psy9949         247 SI----A-GAGPYDVILDAAGIP  264 (383)
Q Consensus       247 ~i----~-~~~g~d~v~d~~g~~  264 (383)
                      .+    . ..+++|++|+++|..
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~  112 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVA  112 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            22    2 236899999999863

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.53  E-value=0.012  Score=52.03  Aligned_cols=77  Identities=25%  Similarity=0.365  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch-HH----HHHhcCCCee---eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA-KD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~-~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|+++++. .. .+    .+++.+....   .|..+.+..+.+    . ..++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999998863 22 22    2233343322   344443332222    2 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       107 id~lv~nAg~~  117 (269)
T 4dmm_A          107 LDVLVNNAGIT  117 (269)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.53  E-value=0.012  Score=52.23  Aligned_cols=77  Identities=22%  Similarity=0.339  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------c-hHH----HHHhcCCCee---eeCCChHHHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG------------D-AKD----LVTSLNPNLV---IDYNEPEAMHS  247 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~------------~-~~~----~~~~lg~~~v---~~~~~~~~~~~  247 (383)
                      .++++||+||+|++|.++++.+...|++|++++++            . +.+    .+...+....   .|..+.+-.+.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            67899999999999999999999999999999854            1 111    1223343322   34444332222


Q ss_pred             H----h-cCCCccEEEEcCCCC
Q psy9949         248 I----A-GAGPYDVILDAAGIP  264 (383)
Q Consensus       248 i----~-~~~g~d~v~d~~g~~  264 (383)
                      +    . ..+++|++|+++|..
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~  113 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIA  113 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            2    2 236899999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.53  E-value=0.013  Score=51.47  Aligned_cols=77  Identities=21%  Similarity=0.235  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCCe-e--eeCCChHHHHH----Hh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPNL-V--IDYNEPEAMHS----IA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~~-v--~~~~~~~~~~~----i~-~~~g~  254 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++. +.+ ...   +.+... .  .|..+.+-...    +. ..+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999998664 222 222   234331 1  34444332222    22 23689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|+++|..
T Consensus        86 d~lv~nAg~~   95 (262)
T 1zem_A           86 DFLFNNAGYQ   95 (262)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.53  E-value=0.012  Score=52.67  Aligned_cols=77  Identities=21%  Similarity=0.306  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCee--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLV--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .++++||+||+|  ++|.++++.+...|++|++++++++ .+    ...+.+....  .|..+.+..+.+.     ..++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999887  9999999998889999999986643 22    2334443333  3444443332222     2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       109 iD~lVnnAG~~  119 (296)
T 3k31_A          109 LDFVVHAVAFS  119 (296)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999854

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.53  E-value=0.012  Score=53.00  Aligned_cols=95  Identities=18%  Similarity=0.139  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhcCCC-eee-e---CCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSLNPN-LVI-D---YNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~lg~~-~v~-~---~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+.+++|.|++..+|..+++++...|++|++..++..  .+++..++.. +.. .   .+..++.+.+.   .+|+||.+
T Consensus       176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~---~ADIVIsA  252 (320)
T 1edz_A          176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL---DSDVVITG  252 (320)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH---HCSEEEEC
T ss_pred             CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc---cCCEEEEC
Confidence            7899999995446799999999999999888876521  2333334321 100 0   11134444443   58999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCC
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      +|.+.....  -+.++  ++..+++++.+
T Consensus       253 tg~p~~vI~--~e~vk--~GavVIDVgi~  277 (320)
T 1edz_A          253 VPSENYKFP--TEYIK--EGAVCINFACT  277 (320)
T ss_dssp             CCCTTCCBC--TTTSC--TTEEEEECSSS
T ss_pred             CCCCcceeC--HHHcC--CCeEEEEcCCC
Confidence            998865333  45677  88888888654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.52  E-value=0.0057  Score=54.37  Aligned_cols=77  Identities=21%  Similarity=0.290  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCC---C-ee--eeCCChHHHHHHh-----cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNP---N-LV--IDYNEPEAMHSIA-----GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~---~-~v--~~~~~~~~~~~i~-----~~  251 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +.+ ...   +.+.   . ..  .|..+.+..+.+.     ..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999988999999999764 222 222   2232   1 11  3544433222221     23


Q ss_pred             CCccEEEEcCCCC
Q psy9949         252 GPYDVILDAAGIP  264 (383)
Q Consensus       252 ~g~d~v~d~~g~~  264 (383)
                      +++|++|+++|..
T Consensus        85 g~iD~lv~nAg~~   97 (280)
T 1xkq_A           85 GKIDVLVNNAGAA   97 (280)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            6799999999853

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.52  E-value=0.0064  Score=55.24  Aligned_cols=76  Identities=20%  Similarity=0.320  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HH---HhcCC--C-ee--eeCCChHHHHH----Hh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LV---TSLNP--N-LV--IDYNEPEAMHS----IA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~---~~lg~--~-~v--~~~~~~~~~~~----i~-~~~  252 (383)
                      .+++|||+||+|++|..++..+...|++|++++++. +.+ ..   ...+.  . .+  .|..+.+-.+.    +. ..+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999989999999999764 322 22   22232  1 11  35444332222    22 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus        87 ~id~lv~nAg~   97 (319)
T 3ioy_A           87 PVSILCNNAGV   97 (319)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            89999999985

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.52  E-value=0.011  Score=50.69  Aligned_cols=75  Identities=17%  Similarity=0.216  Sum_probs=51.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC---eeeeCCChHHHHHHhc-C-CCccEEEEcCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN---LVIDYNEPEAMHSIAG-A-GPYDVILDAAG  262 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~---~v~~~~~~~~~~~i~~-~-~g~d~v~d~~g  262 (383)
                      +++||+||+|++|.+++..+...|++|+++++++ +. +...+++..   ...|..+.+..+.+.+ . ..+|++|+++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            4699999999999999999999999999999764 33 344455432   1135555443333332 2 24599999998


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        82 ~~   83 (230)
T 3guy_A           82 SG   83 (230)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.52  E-value=0.043  Score=48.37  Aligned_cols=96  Identities=19%  Similarity=0.059  Sum_probs=65.9

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+...+...|.+. .+.   -.|++++|.|.++-+|..++.++...|++|+...+..                  .++
T Consensus       141 ~PcTp~gv~~lL~~~-~i~---l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------------~~L  198 (286)
T 4a5o_A          141 RPCTPKGIMTLLAST-GAD---LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------------RDL  198 (286)
T ss_dssp             CCHHHHHHHHHHHHT-TCC---CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------------SCH
T ss_pred             CCCCHHHHHHHHHHh-CCC---CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------------cCH
Confidence            344444445555433 221   3789999999767799999999999999988775421                  123


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      .+.++   .+|++|.++|.+... .  -+.++  ++..+++++...
T Consensus       199 ~~~~~---~ADIVI~Avg~p~~I-~--~~~vk--~GavVIDvgi~~  236 (286)
T 4a5o_A          199 ADHVS---RADLVVVAAGKPGLV-K--GEWIK--EGAIVIDVGINR  236 (286)
T ss_dssp             HHHHH---TCSEEEECCCCTTCB-C--GGGSC--TTCEEEECCSCS
T ss_pred             HHHhc---cCCEEEECCCCCCCC-C--HHHcC--CCeEEEEecccc
Confidence            33332   589999999987653 3  45678  888999987543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.51  E-value=0.012  Score=51.68  Aligned_cols=76  Identities=17%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---h-cCCCee----eeCCChHHHHHH----h-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---S-LNPNLV----IDYNEPEAMHSI----A-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~-lg~~~v----~~~~~~~~~~~i----~-~~~  252 (383)
                      .++++||+||++++|.++++.+...|++|++++++.. .+ ..+   + .+...+    .|..+.+-.+.+    . ..+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999987642 22 222   2 333212    344443332222    2 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|+++|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999985

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.50  E-value=0.012  Score=51.20  Aligned_cols=77  Identities=25%  Similarity=0.399  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-HH-HH---HhcCCCe-e--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-KD-LV---TSLNPNL-V--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~~-~~---~~lg~~~-v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|+++++ ++. .+ ..   ++.+... .  .|..+.+..+.+.     ..++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999987 432 22 22   2234331 1  3444433222222     2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        83 id~lv~nAg~~   93 (246)
T 2uvd_A           83 VDILVNNAGVT   93 (246)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.50  E-value=0.014  Score=51.93  Aligned_cols=77  Identities=18%  Similarity=0.309  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-H-HH---HHhcCCCe-e--eeCCChHHHH----HHh-cCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-K-DL---VTSLNPNL-V--IDYNEPEAMH----SIA-GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~-~~---~~~lg~~~-v--~~~~~~~~~~----~i~-~~~  252 (383)
                      -.++++||+||+|++|.++++.+...|++|+++++ +.+ . +.   +.+.+... .  .|..+.+..+    .+. ..+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999984 332 2 22   22334331 1  2444433222    222 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|+++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            89999999986

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.48  E-value=0.01  Score=51.64  Aligned_cols=74  Identities=23%  Similarity=0.347  Sum_probs=50.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-ee--eeCCChHHHHHHh-c----CCCccEEEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LV--IDYNEPEAMHSIA-G----AGPYDVILD  259 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v--~~~~~~~~~~~i~-~----~~g~d~v~d  259 (383)
                      ++++|+||+|++|.++++.+...|++|++++++. +. +...+++.. ..  .|..+.+..+.+. .    .+++|++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            3689999999999999999988999999998764 33 233444432 11  3544443333332 2    257999999


Q ss_pred             cCCC
Q psy9949         260 AAGI  263 (383)
Q Consensus       260 ~~g~  263 (383)
                      ++|.
T Consensus        81 nAg~   84 (248)
T 3asu_A           81 NAGL   84 (248)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9985

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.48  E-value=0.028  Score=49.59  Aligned_cols=94  Identities=19%  Similarity=0.118  Sum_probs=63.5

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+...+...|.+.. +.   -.|++++|.|+++.+|..+++++...|++|+...+.                  ..++
T Consensus       141 ~PcTp~gv~~lL~~~~-i~---l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~------------------t~~L  198 (285)
T 3l07_A          141 ESCTPKGIMTMLREYG-IK---TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF------------------TTDL  198 (285)
T ss_dssp             CCHHHHHHHHHHHHTT-CC---CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSSH
T ss_pred             CCCCHHHHHHHHHHhC-CC---CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC------------------chhH
Confidence            3444444444554332 21   378999999966668999999999999998766432                  1123


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ..+|++|.++|.+... .  -+.++  ++..+++++.
T Consensus       199 ~~~~---~~ADIVI~Avg~p~~I-~--~~~vk--~GavVIDvgi  234 (285)
T 3l07_A          199 KSHT---TKADILIVAVGKPNFI-T--ADMVK--EGAVVIDVGI  234 (285)
T ss_dssp             HHHH---TTCSEEEECCCCTTCB-C--GGGSC--TTCEEEECCC
T ss_pred             HHhc---ccCCEEEECCCCCCCC-C--HHHcC--CCcEEEEecc
Confidence            3332   3589999999987652 3  45677  8888888864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.47  E-value=0.013  Score=51.71  Aligned_cols=78  Identities=26%  Similarity=0.380  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-HH----HHHhcCCCee---eeCCChHHHHHHh-----cCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-KD----LVTSLNPNLV---IDYNEPEAMHSIA-----GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~~----~~~~lg~~~v---~~~~~~~~~~~i~-----~~~  252 (383)
                      ..++++||+||+|++|.++++.+...|++|++++ ++++ .+    ..+..+....   .|..+.+..+.+.     ..+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999988888899999886 3332 22    2233443322   3555543332222     236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus       105 ~iD~lvnnAG~~  116 (267)
T 3u5t_A          105 GVDVLVNNAGIM  116 (267)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            899999999853

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.47  E-value=0.0063  Score=54.66  Aligned_cols=76  Identities=21%  Similarity=0.317  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCC---C-ee--eeCCChHHHHHHh-----cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNP---N-LV--IDYNEPEAMHSIA-----GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~---~-~v--~~~~~~~~~~~i~-----~~  251 (383)
                      .++++||+||+|++|.++++.+...|++|++++++.. .+ ...   +.+.   . ..  .|..+.+..+.+.     ..
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999889999999987642 22 222   2232   1 11  3444433222221     23


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++|+++|.
T Consensus       105 g~iD~lvnnAG~  116 (297)
T 1xhl_A          105 GKIDILVNNAGA  116 (297)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            689999999985

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.47  E-value=0.015  Score=51.32  Aligned_cols=77  Identities=19%  Similarity=0.298  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-H---HHhcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-L---VTSLNPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~---~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|..++..+...|++|++++++.. .+ .   +++.+.. .+  .|..+.+..+.+.     ..+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999999989999999996642 22 2   2233432 12  3444433222221     23689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus       110 D~li~~Ag~~  119 (272)
T 1yb1_A          110 SILVNNAGVV  119 (272)
T ss_dssp             SEEEECCCCC
T ss_pred             cEEEECCCcC
Confidence            9999999853

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.47  E-value=0.01  Score=54.02  Aligned_cols=76  Identities=21%  Similarity=0.323  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc------hHH----HHHhcCCC-ee--eeCCChHHHHH----Hh-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD------AKD----LVTSLNPN-LV--IDYNEPEAMHS----IA-  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~------~~~----~~~~lg~~-~v--~~~~~~~~~~~----i~-  249 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.      +.+    .+.+.+.. ..  .|..+..-.+.    +. 
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999987541      111    12233432 12  34444332222    21 


Q ss_pred             cCCCccEEEEcCCC
Q psy9949         250 GAGPYDVILDAAGI  263 (383)
Q Consensus       250 ~~~g~d~v~d~~g~  263 (383)
                      ..+++|++|+++|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            23689999999995

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.47  E-value=0.01  Score=53.85  Aligned_cols=76  Identities=29%  Similarity=0.398  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---------Cc-hHH----HHHhcCCCeeeeCCChH----HHHHHh
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS---------GD-AKD----LVTSLNPNLVIDYNEPE----AMHSIA  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~---------~~-~~~----~~~~lg~~~v~~~~~~~----~~~~i~  249 (383)
                      .+++++|+||+|++|..+++.+...|++|++.++         +. +.+    .++..+...+.|..+..    +.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            5789999999999999999999889999998742         22 221    22233443345655543    222222


Q ss_pred             -cCCCccEEEEcCCC
Q psy9949         250 -GAGPYDVILDAAGI  263 (383)
Q Consensus       250 -~~~g~d~v~d~~g~  263 (383)
                       ..+++|++|+++|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence             34689999999985

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.46  E-value=0.014  Score=51.09  Aligned_cols=77  Identities=18%  Similarity=0.242  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-HH----HHHhcCCC-ee--eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-KD----LVTSLNPN-LV--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~~----~~~~lg~~-~v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      .++++||+||++++|.++++.+...|++|++++ ++++ .+    .+++.+.. ..  .|..+.+-.+.+    . ..++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            678999999999999999999999999999985 3332 22    22334432 22  344443322222    2 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        87 id~lv~nAg~~   97 (259)
T 3edm_A           87 IHGLVHVAGGL   97 (259)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCCcc
Confidence            99999999853

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.46  E-value=0.013  Score=51.82  Aligned_cols=77  Identities=18%  Similarity=0.334  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HH----HHHhcCCCee---eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g  253 (383)
                      .++++||+||++++|.++++.+...|++|+++++.. + .+    .+++.+....   .|..+.+-..++    . ..++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999987432 2 22    2233454322   344443322222    2 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        97 id~lvnnAg~~  107 (270)
T 3is3_A           97 LDIAVSNSGVV  107 (270)
T ss_dssp             CCEEECCCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.46  E-value=0.015  Score=51.49  Aligned_cols=76  Identities=28%  Similarity=0.394  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCC-Cee----eeCCChHHHHHHh-----cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNP-NLV----IDYNEPEAMHSIA-----GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~-~~v----~~~~~~~~~~~i~-----~~~  252 (383)
                      .++++||+||+|++|..+++.+...|++|++++++. +.+ .   +++.+. ..+    .|..+.+..+.+.     ..+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            568999999999999999999988999999999764 222 2   223332 111    3444433222221     135


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus       111 ~iD~vi~~Ag~  121 (279)
T 1xg5_A          111 GVDICINNAGL  121 (279)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999985

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.46  E-value=0.018  Score=49.81  Aligned_cols=74  Identities=18%  Similarity=0.197  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+.+|+|+||+|.+|..+++.+...  |.+|++++++.. .+.+ ..+...+ .|..+.+....+.  .++|+||.++|.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAF--QGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHH--TTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHH--cCCCEEEEeccc
Confidence            5678999999999999999988888  789999997643 2211 1122222 3444433222222  469999999885


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        80 ~   80 (253)
T 1xq6_A           80 V   80 (253)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.45  E-value=0.024  Score=50.49  Aligned_cols=74  Identities=20%  Similarity=0.227  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhc----CCC-eeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSL----NPN-LVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~l----g~~-~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      ++++++|+||+|++|.+++..+...|++|+++.++. +. ++++++    +.. ...|..+.+-...+  ...+|++|++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~DvlVn~  195 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA--VKGAHFVFTA  195 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH--TTTCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHH--HHhCCEEEEC
Confidence            678999999999999999999999999988888663 32 233332    322 22455443322222  2358999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus       196 ag~  198 (287)
T 1lu9_A          196 GAI  198 (287)
T ss_dssp             CCT
T ss_pred             CCc
Confidence            974

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.45  E-value=0.0046  Score=54.56  Aligned_cols=77  Identities=29%  Similarity=0.430  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh----cCCCe-e--eeCCChHHH----HHHhc-CCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS----LNPNL-V--IDYNEPEAM----HSIAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~----lg~~~-v--~~~~~~~~~----~~i~~-~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|++++++.. .+ ..++    .+... .  .|..+.+..    +++.+ .++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997642 22 2222    34331 1  344443322    22222 368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        99 id~lv~nAg~~  109 (266)
T 4egf_A           99 LDVLVNNAGIS  109 (266)
T ss_dssp             CSEEEEECCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.45  E-value=0.011  Score=52.58  Aligned_cols=76  Identities=20%  Similarity=0.215  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCCee----eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPNLV----IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~~v----~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +.+ .   +.+.+...+    .|..+.+..+.+.     ..++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999988999999999764 322 2   223343222    3444433222222     1368


Q ss_pred             ccEEEEc-CCC
Q psy9949         254 YDVILDA-AGI  263 (383)
Q Consensus       254 ~d~v~d~-~g~  263 (383)
                      +|++|.+ .|.
T Consensus       107 iD~li~naag~  117 (286)
T 1xu9_A          107 LDMLILNHITN  117 (286)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            9999998 454

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.45  E-value=0.014  Score=51.22  Aligned_cols=76  Identities=18%  Similarity=0.240  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HH---HhcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LV---TSLNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~---~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ..   ++.+... .  .|..+.+-.+.+.     ..+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999889999999997642 22 22   2234321 1  3444433222221     23689


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|+++|.
T Consensus        93 D~lv~~Ag~  101 (260)
T 2zat_A           93 DILVSNAAV  101 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.45  E-value=0.012  Score=51.59  Aligned_cols=77  Identities=26%  Similarity=0.429  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HH-HHHhc----CCCe-e--eeCCChHHHHHHh-----cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KD-LVTSL----NPNL-V--IDYNEPEAMHSIA-----GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~-~~~~l----g~~~-v--~~~~~~~~~~~i~-----~~~  252 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++. + .+ ..+++    +... .  .|..+.+..+.+.     ..+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999999998654 3 22 22222    4331 1  2444433222221     236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus        83 ~iD~lv~~Ag~~   94 (260)
T 1x1t_A           83 RIDILVNNAGIQ   94 (260)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            899999999853

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.44  E-value=0.011  Score=54.57  Aligned_cols=76  Identities=16%  Similarity=0.288  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH--CCCEEEEEecCch------------HHH--HHhcCCCee-eeCCChHHHHHHhc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKA--WDIEVVTTCSGDA------------KDL--VTSLNPNLV-IDYNEPEAMHSIAG  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~--~G~~Vi~~~~~~~------------~~~--~~~lg~~~v-~~~~~~~~~~~i~~  250 (383)
                      .+.+|||+||+|.+|..++..+..  .|++|+++++...            ...  ....+...+ .|..+.+..+.+ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~   87 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-E   87 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-h
Confidence            568999999999999999888887  8999999996432            011  111122211 344444433333 2


Q ss_pred             CCCccEEEEcCCCC
Q psy9949         251 AGPYDVILDAAGIP  264 (383)
Q Consensus       251 ~~g~d~v~d~~g~~  264 (383)
                      ..++|+||.++|..
T Consensus        88 ~~~~D~vih~A~~~  101 (362)
T 3sxp_A           88 KLHFDYLFHQAAVS  101 (362)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             ccCCCEEEECCccC
Confidence            46899999999853

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.44  E-value=0.011  Score=51.85  Aligned_cols=76  Identities=16%  Similarity=0.217  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc-----CCC-ee--eeCCChHHHH----HHhcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL-----NPN-LV--IDYNEPEAMH----SIAGAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l-----g~~-~v--~~~~~~~~~~----~i~~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ..+++     +.. ..  .|..+.+..+    ++.+..+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999998889999999987642 22 22222     212 12  3544433222    2222224


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|+++|.
T Consensus        86 id~lv~~Ag~   95 (260)
T 2z1n_A           86 ADILVYSTGG   95 (260)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.44  E-value=0.015  Score=52.00  Aligned_cols=76  Identities=21%  Similarity=0.313  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c--hHH----HHHhcCCCee---eeCCChHHHHHH----h-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D--AKD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~--~~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~  252 (383)
                      .++++||+||+|++|.+++..+...|++|++++++ +  ..+    ..++.+....   .|..+.+..+.+    . ..+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999998854 2  121    2233454322   244443322222    2 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|+++|.
T Consensus       128 ~iD~lv~nAg~  138 (294)
T 3r3s_A          128 GLDILALVAGK  138 (294)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999985

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.44  E-value=0.0069  Score=53.68  Aligned_cols=77  Identities=19%  Similarity=0.287  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhc---C---CC-ee--eeCCChHHHHHHh-----cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSL---N---PN-LV--IDYNEPEAMHSIA-----GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~l---g---~~-~v--~~~~~~~~~~~i~-----~~  251 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +.+ ..+++   .   .. ..  .|..+.+..+.+.     ..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            568999999999999999998888999999999764 322 22222   2   11 11  3444433222222     23


Q ss_pred             CCccEEEEcCCCC
Q psy9949         252 GPYDVILDAAGIP  264 (383)
Q Consensus       252 ~g~d~v~d~~g~~  264 (383)
                      +++|++|+++|..
T Consensus        85 g~id~lv~~Ag~~   97 (278)
T 1spx_A           85 GKLDILVNNAGAA   97 (278)
T ss_dssp             SCCCEEEECCC--
T ss_pred             CCCCEEEECCCCC
Confidence            5899999999853

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.44  E-value=0.018  Score=50.23  Aligned_cols=75  Identities=24%  Similarity=0.380  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHH---hcCCC-ee--eeCCChHHHHHHh-----cCCCcc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVT---SLNPN-LV--IDYNEPEAMHSIA-----GAGPYD  255 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~---~lg~~-~v--~~~~~~~~~~~i~-----~~~g~d  255 (383)
                      +++++|+||+|++|..+++.+...|++|++++++.+ .+ ..+   +.+.. ..  .|..+.+..+.+.     ..+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999987643 22 222   23432 11  3444433222221     236899


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|+++|.
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.44  E-value=0.013  Score=53.19  Aligned_cols=77  Identities=18%  Similarity=0.311  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-------------chHH----HHHhcCCCee---eeCCChHHHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-------------DAKD----LVTSLNPNLV---IDYNEPEAMHS  247 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-------------~~~~----~~~~lg~~~v---~~~~~~~~~~~  247 (383)
                      .++++||+||+|++|.++++.+...|++|+++++.             ++.+    .+.+.+....   .|..+.+-.+.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            67899999999999999999999999999998743             1111    2223443322   34444332222


Q ss_pred             H----h-cCCCccEEEEcCCCC
Q psy9949         248 I----A-GAGPYDVILDAAGIP  264 (383)
Q Consensus       248 i----~-~~~g~d~v~d~~g~~  264 (383)
                      +    . ..+++|++|+++|..
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~  146 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGIS  146 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            2    1 236899999999853

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.43  E-value=0.016  Score=50.50  Aligned_cols=76  Identities=18%  Similarity=0.312  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HH---HHhcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DL---VTSLNPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~---~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. . +.   +++.+.. .+  .|..+.+..+.+.     ..+++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999889999999997642 2 22   2223432 12  3444433222221     13589


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        92 d~vi~~Ag~  100 (260)
T 3awd_A           92 DILVACAGI  100 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.43  E-value=0.01  Score=52.54  Aligned_cols=76  Identities=18%  Similarity=0.257  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-H-HHHHhc----CCCe-e--eeCCCh----HHHHHHh----
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-K-DLVTSL----NPNL-V--IDYNEP----EAMHSIA----  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~-~~~~~l----g~~~-v--~~~~~~----~~~~~i~----  249 (383)
                      .++++||+||+|++|..++..+...|++|+++++ ++. . +...++    +... .  .|..+.    +..+.+.    
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4679999999999999999999889999999987 542 2 222222    4321 1  244433    2222221    


Q ss_pred             -cCCCccEEEEcCCC
Q psy9949         250 -GAGPYDVILDAAGI  263 (383)
Q Consensus       250 -~~~g~d~v~d~~g~  263 (383)
                       ..+++|++|+++|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence             23589999999985

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.43  E-value=0.014  Score=51.30  Aligned_cols=77  Identities=21%  Similarity=0.250  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc-----CCC-ee--eeCCChHHHHHHh-----cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL-----NPN-LV--IDYNEPEAMHSIA-----GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l-----g~~-~v--~~~~~~~~~~~i~-----~~~  252 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ...++     +.. ..  .|..+.+-.+.+.     ..+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999987642 22 22222     111 11  3444433222221     236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus        86 ~id~lv~~Ag~~   97 (267)
T 2gdz_A           86 RLDILVNNAGVN   97 (267)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999853

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.42  E-value=0.011  Score=53.98  Aligned_cols=78  Identities=19%  Similarity=0.262  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHh----cCCC-ee--eeCCChHHHHHHhcCCCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTS----LNPN-LV--IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~----lg~~-~v--~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      ..+.+|||+||+|.+|..+++.+...|++|+++++.. + .+....    .+.. .+  .|..+.+....+.+..++|+|
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            3567999999999999999999999999999998543 2 122211    1211 22  344454444444444589999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.+++..
T Consensus        83 ih~A~~~   89 (341)
T 3enk_A           83 IHFAALK   89 (341)
T ss_dssp             EECCCCC
T ss_pred             EECcccc
Confidence            9999864

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.40  E-value=0.015  Score=51.06  Aligned_cols=77  Identities=22%  Similarity=0.358  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----HH-HHHhcCCCee--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----KD-LVTSLNPNLV--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~~-~~~~lg~~~v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+  |++|..+++.+...|++|++++++++    .+ +..+.+....  .|..+.+..+.+.     ..++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  99999999888888999999986643    12 2223343222  3444433222222     2358


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        87 iD~lv~~Ag~~   97 (261)
T 2wyu_A           87 LDYLVHAIAFA   97 (261)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.40  E-value=0.014  Score=51.64  Aligned_cols=77  Identities=18%  Similarity=0.279  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----HH-HHHhcCCCee--eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----KD-LVTSLNPNLV--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~~-~~~~lg~~~v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      .+++++|+||+  |++|..+++.+...|++|++++++.+    .+ +..+.+...+  .|..+.+..+.+    . ..++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  99999999999889999999996642    12 2223342222  355543322222    2 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        85 id~lv~nAg~~   95 (275)
T 2pd4_A           85 LDFIVHSVAFA   95 (275)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            99999999853

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.39  E-value=0.01  Score=49.70  Aligned_cols=63  Identities=25%  Similarity=0.473  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHH-HhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHS-IAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~-i~~~~g~d~v~d~~g~  263 (383)
                      +++|+||+|++|..+++.+. .|++|++++++..         ....|..+.+..+. +...+++|++|.++|.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            69999999999999998888 8999999987643         12234444333322 2333579999999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.38  E-value=0.0061  Score=52.96  Aligned_cols=76  Identities=20%  Similarity=0.252  Sum_probs=44.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHH------HHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAM------HSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~------~~i~~~~g~d~v~d~  260 (383)
                      .++++||+||+|++|..+++.+.. |++|++++++. +.+.+.+......+..+-.+..      +.+.+.+++|++|++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~   82 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA   82 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence            568999999999999988877655 88999998664 3343333322222222211111      111223579999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus        83 Ag~~   86 (245)
T 3e9n_A           83 AAVA   86 (245)
T ss_dssp             C---
T ss_pred             CCcC
Confidence            9863

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.38  E-value=0.0079  Score=52.51  Aligned_cols=76  Identities=21%  Similarity=0.285  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCch---HHHHH-hc-CCC-ee--eeCCCh-H-HHH---HHh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSGDA---KDLVT-SL-NPN-LV--IDYNEP-E-AMH---SIA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~~~---~~~~~-~l-g~~-~v--~~~~~~-~-~~~---~i~-~~~  252 (383)
                      .+++++|+||+|++|..+++.+...|++ |++++++..   .+.+. .. +.. .+  .|..+. + ..+   .+. ..+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            5689999999999999999999999995 888886542   22222 22 211 11  244433 2 222   221 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|+++|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            89999999985

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.38  E-value=0.016  Score=51.15  Aligned_cols=76  Identities=20%  Similarity=0.442  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCC--C-ee--eeCCChHHHHHHh-----cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNP--N-LV--IDYNEPEAMHSIA-----GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~--~-~v--~~~~~~~~~~~i~-----~~~g~d  255 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.+ . +...+++.  . .+  .|..+.+..+.+.     ..+++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5689999999999999999998889999999986643 2 23333432  1 12  3444433222221     135899


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++|+++|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999985

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.38  E-value=0.013  Score=51.36  Aligned_cols=76  Identities=17%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HH---HhcCCCe-e--eeCCChHHHHHHhc-----C-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LV---TSLNPNL-V--IDYNEPEAMHSIAG-----A-GP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~---~~lg~~~-v--~~~~~~~~~~~i~~-----~-~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ..   ++.+... .  .|..+.+..+.+.+     . ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999889999999987642 22 22   2234321 1  24444332222221     2 67


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999985

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.38  E-value=0.0069  Score=51.51  Aligned_cols=70  Identities=17%  Similarity=0.285  Sum_probs=47.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeee--eCCChHHHHHHhc-CCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVI--DYNEPEAMHSIAG-AGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~--~~~~~~~~~~i~~-~~g~d~v~d~~g~~  264 (383)
                      +|+|+||+|.+|..+++.+...|.+|++++++....  ..+....++  |..+  ..+.+.+ ..++|+||.++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~~~~D~~d--~~~~~~~~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV--PQYNNVKAVHFDVDW--TPEEMAKQLHGMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS--CCCTTEEEEECCTTS--CHHHHHTTTTTCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch--hhcCCceEEEecccC--CHHHHHHHHcCCCEEEECCcCC
Confidence            699999999999999999999999999999764321  111111222  3333  1223333 35899999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.37  E-value=0.013  Score=52.07  Aligned_cols=77  Identities=19%  Similarity=0.371  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHH-HHH---hc-CCCe-e--eeCCChHHHHH----Hh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKD-LVT---SL-NPNL-V--IDYNEPEAMHS----IA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~-~~~---~l-g~~~-v--~~~~~~~~~~~----i~-~~~  252 (383)
                      .++++||+||+|++|..++..+...|++|+++++..  +.+ ...   +. +... .  .|..+.+..+.    +. ..+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            578999999999999999999999999999998633  222 222   22 2221 1  24444332222    22 236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus       104 ~iD~lv~nAg~~  115 (281)
T 3v2h_A          104 GADILVNNAGVQ  115 (281)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            899999999863

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.37  E-value=0.014  Score=54.72  Aligned_cols=76  Identities=18%  Similarity=0.152  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecCc-hH----------------HHHHhcCCCee---eeCCChHHH-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSGD-AK----------------DLVTSLNPNLV---IDYNEPEAM-  245 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~~~~-~~----------------~~~~~lg~~~v---~~~~~~~~~-  245 (383)
                      .++++||+||++++|++++..+.. .|++|+++.++. ..                +.+++.|....   .|..+..-. 
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            578999999999999988777777 899999987442 11                33445564422   244443322 


Q ss_pred             ---HHHh-cC-CCccEEEEcCCC
Q psy9949         246 ---HSIA-GA-GPYDVILDAAGI  263 (383)
Q Consensus       246 ---~~i~-~~-~g~d~v~d~~g~  263 (383)
                         +.+. +. +++|++++++|.
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHcCCCCCEEEEcCcc
Confidence               2222 35 789999999986

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.37  E-value=0.014  Score=51.36  Aligned_cols=76  Identities=28%  Similarity=0.387  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEecCch-H-HHHH---hcCCCee----eeCCChHHHHHH----h-cCC
Q psy9949         188 RDKRVLVLGASG-GVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVT---SLNPNLV----IDYNEPEAMHSI----A-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g-~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~---~lg~~~v----~~~~~~~~~~~i----~-~~~  252 (383)
                      .++++||+||+| ++|..++..+...|++|++++++.+ . +..+   +.+...+    .|..+.+..+.+    . ..+
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            578999999876 8999999988889999999997643 2 2222   2332222    344443322222    2 236


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus       101 ~id~li~~Ag~  111 (266)
T 3o38_A          101 RLDVLVNNAGL  111 (266)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            89999999985

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.37  E-value=0.033  Score=49.09  Aligned_cols=95  Identities=19%  Similarity=0.072  Sum_probs=64.5

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+...+...|.+..--    -.|++++|.|+++.+|..++.++...|++|+...+..                  .++
T Consensus       140 ~PcTp~gv~~lL~~~~i~----l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------------~~L  197 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEID----LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------------KDL  197 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCC----CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------SCH
T ss_pred             CCCCHHHHHHHHHHhCCC----CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------------hhH
Confidence            344444444444433211    3789999999766799999999999999988765421                  122


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .+.+   ..+|++|.++|.+... .  -+.++  ++..+++++.+
T Consensus       198 ~~~~---~~ADIVI~Avg~p~~I-~--~~~vk--~GavVIDVgi~  234 (285)
T 3p2o_A          198 SLYT---RQADLIIVAAGCVNLL-R--SDMVK--EGVIVVDVGIN  234 (285)
T ss_dssp             HHHH---TTCSEEEECSSCTTCB-C--GGGSC--TTEEEEECCCE
T ss_pred             HHHh---hcCCEEEECCCCCCcC-C--HHHcC--CCeEEEEeccC
Confidence            2322   3589999999987653 3  45678  88888888754

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.36  E-value=0.0063  Score=52.55  Aligned_cols=74  Identities=23%  Similarity=0.261  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhc-CCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAG-AGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~-~~g~d~v~d~~g  262 (383)
                      .+.+|+|+||+|++|..+++.+...|+  +|++++++.. .+....-+...+ .|..+.+   .+.+ ..++|++|+++|
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~d~vi~~ag   93 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD---DYASAFQGHDVGFCCLG   93 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGG---GGGGGGSSCSEEEECCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHH---HHHHHhcCCCEEEECCC
Confidence            457899999999999999998888899  9999996542 211111122111 2222221   2222 247999999998


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        94 ~~   95 (242)
T 2bka_A           94 TT   95 (242)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.36  E-value=0.018  Score=50.02  Aligned_cols=77  Identities=22%  Similarity=0.360  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHH----HHHhcCCCee---eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g  253 (383)
                      .++++||+||+|++|.++++.+...|++|+++++..  +.+    .+++.+....   .|..+.+-.+.+    . ..++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999887532  222    2233444322   244443322222    2 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        83 id~lv~nAg~~   93 (246)
T 3osu_A           83 LDVLVNNAGIT   93 (246)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.35  E-value=0.017  Score=50.69  Aligned_cols=77  Identities=19%  Similarity=0.304  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----HH-HHHhcCCCee--eeCCChHHHHH----Hhc-CCC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----KD-LVTSLNPNLV--IDYNEPEAMHS----IAG-AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~~-~~~~lg~~~v--~~~~~~~~~~~----i~~-~~g  253 (383)
                      .++++||+||+  |++|.++++.+...|++|++++++.+    .+ +....+....  .|..+.+..+.    +.+ .++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999998  99999999999889999999986542    11 2223333223  35555432222    222 357


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        88 iD~lv~~Ag~~   98 (265)
T 1qsg_A           88 FDGFVHSIGFA   98 (265)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.35  E-value=0.014  Score=52.29  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHHCCCEEEEEecCchH-H----HHHhcCCCee--eeCCChHHHHHH----h-cCC
Q psy9949         187 PRDKRVLVLGASGG--VGTMAVQLLKAWDIEVVTTCSGDAK-D----LVTSLNPNLV--IDYNEPEAMHSI----A-GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~--vG~~ai~la~~~G~~Vi~~~~~~~~-~----~~~~lg~~~v--~~~~~~~~~~~i----~-~~~  252 (383)
                      -.++++||+||+|+  +|.++++.+...|++|++++++++. +    +..+.+....  .|..+.+-.+.+    . ..+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            36789999999855  9999999998999999999876432 2    2233443222  344443332222    2 236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus       109 ~iD~lVnnAG~~  120 (293)
T 3grk_A          109 KLDFLVHAIGFS  120 (293)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            899999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.35  E-value=0.012  Score=51.68  Aligned_cols=76  Identities=13%  Similarity=0.287  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h---H-HHHH---hcCCCee---eeCCChHHHHHHh-----cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A---K-DLVT---SLNPNLV---IDYNEPEAMHSIA-----GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~---~-~~~~---~lg~~~v---~~~~~~~~~~~i~-----~~  251 (383)
                      .++++||+||++++|.++++.+...|++|+++++.. +   . +...   +.+....   .|..+.+-.+.+.     ..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999987432 1   1 1222   2343211   3444443332222     23


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++|+++|.
T Consensus        90 g~iD~lvnnAg~  101 (262)
T 3ksu_A           90 GKVDIAINTVGK  101 (262)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            689999999985

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.35  E-value=0.016  Score=51.90  Aligned_cols=76  Identities=16%  Similarity=0.287  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc----CCCe-e--eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL----NPNL-V--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l----g~~~-v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      .+++++|+||+|++|..++..+...|++|++++++.. .+ ..+++    +... +  .|..+.+....+    . ..+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999889999999987642 22 22222    4321 1  344443322222    1 2357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus       105 id~li~~Ag~  114 (302)
T 1w6u_A          105 PNIVINNAAG  114 (302)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.35  E-value=0.017  Score=51.43  Aligned_cols=77  Identities=16%  Similarity=0.260  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch----HH-HHHhcCCCee--eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA----KD-LVTSLNPNLV--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~----~~-~~~~lg~~~v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      .+++++|+||+  |++|.++++.+...|++|++++++.+    .+ +..+.+....  .|..+.+..+.+    . ..++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  89999999988889999999986643    11 2222342222  354443322222    2 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       100 iD~lv~~Ag~~  110 (285)
T 2p91_A          100 LDIIVHSIAYA  110 (285)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.34  E-value=0.012  Score=49.09  Aligned_cols=73  Identities=15%  Similarity=0.195  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|+|+||+|.+|..+++.+...|.+|++++++... +.....+...+ .|..+.+....+  ..++|+||.++|..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~--~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT--VAGQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHH--HTTCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHH--HcCCCEEEECccCC
Confidence            689999999999999999998889999999976432 11111122111 244443222222  24689999999864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.33  E-value=0.0096  Score=51.73  Aligned_cols=77  Identities=17%  Similarity=0.260  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcC---CCee--eeCCChHHHHHHh-----cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLN---PNLV--IDYNEPEAMHSIA-----GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg---~~~v--~~~~~~~~~~~i~-----~~~g~d  255 (383)
                      ++++++|+||+|++|..+++.+...|++|++++++.. .+ ..+++.   ...+  .|..+.+....+.     ..+++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999889999999997643 22 233332   1122  3444433222222     125799


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      ++|.++|..
T Consensus        85 ~li~~Ag~~   93 (251)
T 1zk4_A           85 TLVNNAGIA   93 (251)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999853

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.32  E-value=0.015  Score=45.73  Aligned_cols=76  Identities=17%  Similarity=0.125  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      ..++++|.| .|.+|..+++.+...|.+|+++++++ +.+.+++.+...+ .|..+....... ...++|++|.+++...
T Consensus         5 ~~~~v~I~G-~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~-~~~~~d~vi~~~~~~~   82 (141)
T 3llv_A            5 GRYEYIVIG-SEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSL-DLEGVSAVLITGSDDE   82 (141)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHS-CCTTCSEEEECCSCHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhC-CcccCCEEEEecCCHH
Confidence            346799999 69999999999999999999999664 4455666665433 234443332221 2347999999998644

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.31  E-value=0.0064  Score=51.96  Aligned_cols=72  Identities=18%  Similarity=0.241  Sum_probs=47.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|+|+||+|.+|..+++.+...|.+|++++++... +... .+...+ .|..+.+....+  ..++|+||.++|..
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~--~~~~d~vi~~a~~~   78 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEV--CKGADAVISAFNPG   78 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHH--HTTCSEEEECCCC-
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHH--hcCCCEEEEeCcCC
Confidence            589999999999999999999999999999976432 1110 111111 244443322222  24799999999864

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.31  E-value=0.046  Score=48.58  Aligned_cols=95  Identities=22%  Similarity=0.197  Sum_probs=64.8

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+...+...|.+..--    -.|.+++|.|+++.+|..++.++...|++|+...+..+                  ++
T Consensus       145 ~PcTp~gv~~lL~~~~i~----l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------------~l  202 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIE----MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------------TE  202 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCC----CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------------HH
T ss_pred             CCCCHHHHHHHHHHcCCC----CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------------Cc
Confidence            344444455555433221    37899999996666999999999999999887765211                  12


Q ss_pred             H--HHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         245 M--HSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       245 ~--~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .  +.+   ..+|+||.++|.+... .  -+.++  ++..+++++..
T Consensus       203 ~l~~~~---~~ADIVI~Avg~p~~I-~--~~~vk--~GavVIDvgi~  241 (300)
T 4a26_A          203 DMIDYL---RTADIVIAAMGQPGYV-K--GEWIK--EGAAVVDVGTT  241 (300)
T ss_dssp             HHHHHH---HTCSEEEECSCCTTCB-C--GGGSC--TTCEEEECCCE
T ss_pred             hhhhhh---ccCCEEEECCCCCCCC-c--HHhcC--CCcEEEEEecc
Confidence            2  222   2589999999987653 2  45677  88899998754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.31  E-value=0.0052  Score=54.03  Aligned_cols=74  Identities=26%  Similarity=0.383  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHHHHh-----cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMHSIA-----GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~i~-----~~~g~d~v~d~~  261 (383)
                      .++++||+||+|++|.+++..+...|++|++++++.+..  .+..... ..|..+.+..+.+.     ..+++|++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA  104 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--ADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNA  104 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--SSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--ccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence            678999999999999999999999999999999654221  0111111 12444433222221     236899999999


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      |.
T Consensus       105 g~  106 (260)
T 3un1_A          105 GV  106 (260)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.31  E-value=0.018  Score=50.82  Aligned_cols=77  Identities=21%  Similarity=0.331  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhcCCC--ee-eeCCChHHHHHHh-----cCC--
Q psy9949         188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSLNPN--LV-IDYNEPEAMHSIA-----GAG--  252 (383)
Q Consensus       188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~lg~~--~v-~~~~~~~~~~~i~-----~~~--  252 (383)
                      .+++++|+||  +|++|.++++.+...|++|++++++..   .+..++++..  .+ .|..+.+..+.+.     ..+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999998  899999999999999999999987653   2333445432  11 3555543332222     124  


Q ss_pred             -CccEEEEcCCCC
Q psy9949         253 -PYDVILDAAGIP  264 (383)
Q Consensus       253 -g~d~v~d~~g~~  264 (383)
                       ++|++|+++|..
T Consensus        86 ~~iD~lv~nAg~~   98 (269)
T 2h7i_A           86 NKLDGVVHSIGFM   98 (269)
T ss_dssp             CCEEEEEECCCCC
T ss_pred             CCceEEEECCccC
Confidence             799999999853

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.30  E-value=0.04  Score=48.31  Aligned_cols=92  Identities=15%  Similarity=0.075  Sum_probs=64.3

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+.......|.+.. +     .|++++|.|+++-+|..+++++...|++|+...+.                  ..++
T Consensus       132 ~PcTp~gv~~lL~~~~-l-----~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~------------------t~~L  187 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG-Y-----HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK------------------TKDI  187 (276)
T ss_dssp             CCHHHHHHHHHHHHHT-C-----CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSCH
T ss_pred             CCCcHHHHHHHHHHhC-c-----CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC------------------cccH
Confidence            3444444555555444 4     78999999966679999999999999998877542                  1223


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.++   .+|++|.++|.+... .  -+.++  ++..+++++.
T Consensus       188 ~~~~~---~ADIVI~Avg~p~~I-~--~~~vk--~GavVIDvgi  223 (276)
T 3ngx_A          188 GSMTR---SSKIVVVAVGRPGFL-N--REMVT--PGSVVIDVGI  223 (276)
T ss_dssp             HHHHH---HSSEEEECSSCTTCB-C--GGGCC--TTCEEEECCC
T ss_pred             HHhhc---cCCEEEECCCCCccc-c--Hhhcc--CCcEEEEecc
Confidence            33332   479999999987643 2  45667  8888888864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.29  E-value=0.021  Score=49.99  Aligned_cols=77  Identities=25%  Similarity=0.265  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhc---C-------C-Cee--eeCCChHHHHHHh---
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSL---N-------P-NLV--IDYNEPEAMHSIA---  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~l---g-------~-~~v--~~~~~~~~~~~i~---  249 (383)
                      .+++++|+||+|++|..++..+...|++|++++++.. . +..+++   +       . ..+  .|..+.+..+.+.   
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            5689999999999999999988889999999997643 2 223332   2       1 122  2444433222221   


Q ss_pred             --cCCCc-cEEEEcCCCC
Q psy9949         250 --GAGPY-DVILDAAGIP  264 (383)
Q Consensus       250 --~~~g~-d~v~d~~g~~  264 (383)
                        ..+++ |++|.++|..
T Consensus        86 ~~~~g~i~d~vi~~Ag~~  103 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGIT  103 (264)
T ss_dssp             HHHHSSCCSEEEECCCCC
T ss_pred             HHHhCCCCeEEEECCCcC
Confidence              12566 9999999853

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.28  E-value=0.016  Score=50.75  Aligned_cols=75  Identities=20%  Similarity=0.202  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh---cCCC-ee--eeCCChHHH----HHHhc--CCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS---LNPN-LV--IDYNEPEAM----HSIAG--AGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~---lg~~-~v--~~~~~~~~~----~~i~~--~~g  253 (383)
                      .++++||+||+|++|..+++.+...|++|++++++.. .+ ...+   .+.. ..  .|..+.+..    +.+.+  .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            5689999999999999999999999999999986642 22 2222   2322 11  244443322    22222  467


Q ss_pred             ccEEEEcCC
Q psy9949         254 YDVILDAAG  262 (383)
Q Consensus       254 ~d~v~d~~g  262 (383)
                      +|++|+++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999995

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.28  E-value=0.0045  Score=54.14  Aligned_cols=70  Identities=19%  Similarity=0.230  Sum_probs=46.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCeeeeCCChH-HHHHHhcC-CCccEEEEcCCCCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPE-AMHSIAGA-GPYDVILDAAGIPL  265 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v~~~~~~~-~~~~i~~~-~g~d~v~d~~g~~~  265 (383)
                      ++++|+||+|++|..+++.+...|++|+++++++.. +.      ....|..+.+ ..+.+.+. +++|++|+++|...
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            479999999999999999998899999999865421 10      1011222222 22222233 57899999998643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.27  E-value=0.002  Score=56.92  Aligned_cols=73  Identities=30%  Similarity=0.390  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCeeeeCCChHHHH----HHh-cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLVIDYNEPEAMH----SIA-GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~----~i~-~~~g~d~v~d~~  261 (383)
                      .++++||+||+|++|.++++.+...|++|++++++.. .+....+    ..|..+.....    .+. ..+++|++|+++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnA  102 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGLGRLDIVVNNA  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            6789999999999999999999889999999886532 1111111    12333333222    222 236899999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus       103 g~~  105 (266)
T 3uxy_A          103 GVI  105 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            863

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.27  E-value=0.019  Score=49.66  Aligned_cols=77  Identities=18%  Similarity=0.271  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHh----cCCC-ee--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTS----LNPN-LV--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~----lg~~-~v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ...+    .+.. ..  .|..+.+..+.+.     ..++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999988889999999997642 22 2221    2432 11  2444433222221     2358


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus        86 ~d~vi~~Ag~~   96 (248)
T 2pnf_A           86 IDILVNNAGIT   96 (248)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.25  E-value=0.017  Score=50.23  Aligned_cols=77  Identities=19%  Similarity=0.305  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HH---HhcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LV---TSLNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~---~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++.. .+ ..   +..+... .  .|..+.+..+.+.     ..+++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999998888999999987642 22 22   2234321 1  3444433222222     13589


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        90 d~vi~~Ag~~   99 (255)
T 1fmc_A           90 DILVNNAGGG   99 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.25  E-value=0.0093  Score=51.63  Aligned_cols=77  Identities=19%  Similarity=0.300  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc-hHHHHHhc-CCC-ee--eeCCChHHHHHHh----c-CC--C
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD-AKDLVTSL-NPN-LV--IDYNEPEAMHSIA----G-AG--P  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~-~~~~~~~l-g~~-~v--~~~~~~~~~~~i~----~-~~--g  253 (383)
                      .+++++|+||+|++|..+++.+...|  ++|++++++. +.+.+.++ +.. .+  .|..+.+..+.+.    + .+  +
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            35789999999999999999998899  8999999664 33434443 222 12  3444433222222    1 23  7


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus        82 id~li~~Ag~~   92 (250)
T 1yo6_A           82 LSLLINNAGVL   92 (250)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECCccc
Confidence            99999999854

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.23  E-value=0.011  Score=53.62  Aligned_cols=77  Identities=26%  Similarity=0.337  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-----------chH-H---HHHhcCCCee---eeCCChHHHHH--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-----------DAK-D---LVTSLNPNLV---IDYNEPEAMHS--  247 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-----------~~~-~---~~~~lg~~~v---~~~~~~~~~~~--  247 (383)
                      .++++||+||+|++|.+++..+...|++|++++++           ++. +   .+.+.+....   .|..+.+....  
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            67899999999999999999888899999999854           222 2   2223343222   24444332222  


Q ss_pred             --Hh-cCCCccEEEEcCCCC
Q psy9949         248 --IA-GAGPYDVILDAAGIP  264 (383)
Q Consensus       248 --i~-~~~g~d~v~d~~g~~  264 (383)
                        +. +.+++|++|+++|..
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~  125 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIV  125 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence              22 236899999999863

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.23  E-value=0.011  Score=52.22  Aligned_cols=75  Identities=19%  Similarity=0.314  Sum_probs=51.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCC--C-ee--eeCCChHHHHHHh-c----CCCccEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNP--N-LV--IDYNEPEAMHSIA-G----AGPYDVI  257 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~--~-~v--~~~~~~~~~~~i~-~----~~g~d~v  257 (383)
                      +++||+||+|++|.++++.+...|++|++++++. +.+ ...++..  . ..  .|..+.+..+.+. .    .+++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7899999999999999999999999999998764 332 3333321  1 11  3545543333332 2    2578999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |+++|..
T Consensus       102 vnnAG~~  108 (272)
T 2nwq_A          102 INNAGLA  108 (272)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999853

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.22  E-value=0.015  Score=51.09  Aligned_cols=78  Identities=23%  Similarity=0.323  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecCch-H-HHH---HhcCCC-ee--eeCCChHHHHHHh-----cCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSGDA-K-DLV---TSLNPN-LV--IDYNEPEAMHSIA-----GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~~~~~-~-~~~---~~lg~~-~v--~~~~~~~~~~~i~-----~~~  252 (383)
                      .++++++|+||+|++|..++..+.. .|++|++++++.. . +..   ...+.. .+  .|..+.+....+.     ..+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999888887 8999999997642 2 222   222322 22  3444433222221     125


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|.++|..
T Consensus        82 ~id~li~~Ag~~   93 (276)
T 1wma_A           82 GLDVLVNNAGIA   93 (276)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            799999999853

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.22  E-value=0.021  Score=51.11  Aligned_cols=76  Identities=14%  Similarity=0.238  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHh--------cCCC-ee--eeCCChHHHHHHh-----
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTS--------LNPN-LV--IDYNEPEAMHSIA-----  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~--------lg~~-~v--~~~~~~~~~~~i~-----  249 (383)
                      .+++++|+||+|++|..++..+...|++|++++++. +.+ ..++        .+.. ..  .|..+.+....+.     
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999888999999998764 222 2222        1222 11  3444433222222     


Q ss_pred             cCCCccEEEEcCCC
Q psy9949         250 GAGPYDVILDAAGI  263 (383)
Q Consensus       250 ~~~g~d~v~d~~g~  263 (383)
                      ..+++|++|+++|.
T Consensus        97 ~~g~id~li~~Ag~  110 (303)
T 1yxm_A           97 TFGKINFLVNNGGG  110 (303)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            13579999999984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.21  E-value=0.0077  Score=47.24  Aligned_cols=73  Identities=21%  Similarity=0.307  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeee-eCCChHHHHHHhc--CCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVI-DYNEPEAMHSIAG--AGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~-~~~~~~~~~~i~~--~~g~d~v~d~~g~  263 (383)
                      ++++|+|.| +|.+|..+++.+...|.+|+++++++ +.+.+++.+...+. +..+.   +.+.+  ..++|+++.+++.
T Consensus         5 ~~~~v~I~G-~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            5 KNKQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEE---NELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCH---HHHHTTTGGGCSEEEECCCS
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCH---HHHHhcCCCCCCEEEECCCC
Confidence            456799999 59999999999999999998888654 33444445543221 33222   23333  2479999999997


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        81 ~   81 (144)
T 2hmt_A           81 N   81 (144)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.20  E-value=0.0077  Score=52.45  Aligned_cols=73  Identities=27%  Similarity=0.410  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHh-----cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIA-----GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~-----~~~g~d~v~d~~  261 (383)
                      .+++++|+||+|++|..+++.+...|++|++++++. +.+.+.  +  ...|..+.+..+.+.     ..+++|++|+++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~A   89 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   89 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            568999999999999999999988999999998653 222111  1  224555543222221     236799999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        90 g~~   92 (247)
T 1uzm_A           90 GLS   92 (247)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            853

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.20  E-value=0.017  Score=50.03  Aligned_cols=75  Identities=21%  Similarity=0.250  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhc----CCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSL----NPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~l----g~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      +++++|+||+|++|..++..+...|++|++++++.. .+ ..+++    +.. .+  .|..+.+..+.+.     ..+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            568999999999999999988889999999987642 22 22222    221 11  3444433222221     13589


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.20  E-value=0.0052  Score=53.29  Aligned_cols=73  Identities=23%  Similarity=0.311  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee--eeCCChHHHH----HHhc-C--CCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV--IDYNEPEAMH----SIAG-A--GPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v--~~~~~~~~~~----~i~~-~--~g~d~v  257 (383)
                      ..+++++|+||+|++|..+++.+...|++|++++++.....    +....  .|..+.+..+    ++.+ .  +++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            46789999999999999999999989999999986643210    00111  2333322222    2221 2  579999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      |+++|.
T Consensus        81 v~~Ag~   86 (241)
T 1dhr_A           81 LCVAGG   86 (241)
T ss_dssp             EECCCC
T ss_pred             EEcccc
Confidence            999984

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.20  E-value=0.0068  Score=54.77  Aligned_cols=75  Identities=21%  Similarity=0.304  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++..+|||+||+|.+|..+++.+...|.+|++++++...+.   ++...+ .|..+.+....+.+..++|+||.+++..
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   85 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS   85 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence            56789999999999999999999888999999986543211   222211 2444433333333334699999999864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.18  E-value=0.02  Score=50.20  Aligned_cols=77  Identities=16%  Similarity=0.304  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCC--ee--eeCCChHHHHH----Hhc-C
Q psy9949         188 RDKRVLVLGASGG--VGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPN--LV--IDYNEPEAMHS----IAG-A  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~--vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~--~v--~~~~~~~~~~~----i~~-~  251 (383)
                      .+++++|+||+|.  +|..+++.+...|++|++++++++ .+    +..+.+..  .+  .|..+.+..+.    +.+ .
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            6789999999954  999999888889999999986643 22    23344431  22  34444332222    222 3


Q ss_pred             CCccEEEEcCCCC
Q psy9949         252 GPYDVILDAAGIP  264 (383)
Q Consensus       252 ~g~d~v~d~~g~~  264 (383)
                      +++|+++.++|..
T Consensus        86 g~id~li~~Ag~~   98 (266)
T 3oig_A           86 GVIHGIAHCIAFA   98 (266)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCeeEEEEccccc
Confidence            6899999999853

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.17  E-value=0.02  Score=50.82  Aligned_cols=78  Identities=17%  Similarity=0.230  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch---HH-HHHhcCCCee--eeCCChHHHHH----Hh-cCCC
Q psy9949         187 PRDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA---KD-LVTSLNPNLV--IDYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~---~~-~~~~lg~~~v--~~~~~~~~~~~----i~-~~~g  253 (383)
                      -.+++++|+||+  +++|..+++.+...|++|++++++..   .+ +..+.+....  .|..+.+-.+.    +. ..++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            367899999988  66999999988889999999996652   22 2233443223  34444332222    22 2367


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus       104 id~li~nAg~~  114 (280)
T 3nrc_A          104 LDAIVHSIAFA  114 (280)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            99999999864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.16  E-value=0.02  Score=50.97  Aligned_cols=77  Identities=23%  Similarity=0.321  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HH---HhcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LV---TSLNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~---~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|..++..+...|++|+++.++. +.+ ..   ++.+... .  .|..+.+..+.+.     ..+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999998888899999977553 322 22   2234331 1  3444433322222     23679


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus       123 d~li~~Ag~~  132 (285)
T 2c07_A          123 DILVNNAGIT  132 (285)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.14  E-value=0.0042  Score=53.68  Aligned_cols=72  Identities=19%  Similarity=0.262  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee--eeCCChHHH----HHHhc-C--CCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV--IDYNEPEAM----HSIAG-A--GPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v--~~~~~~~~~----~~i~~-~--~g~d~v~  258 (383)
                      .++++||+||+|++|..+++.+...|++|++++++.....    +....  .|..+.+..    +++.+ .  +++|++|
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv   77 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   77 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence            3578999999999999999999999999999986643210    00011  122222222    22221 2  5799999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +++|.
T Consensus        78 ~~Ag~   82 (236)
T 1ooe_A           78 CVAGG   82 (236)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99984

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.14  E-value=0.014  Score=53.33  Aligned_cols=71  Identities=17%  Similarity=0.136  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++....     .+...+ .|..+.+....+.  .++|+||.+++..
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~--~~~d~vih~A~~~   88 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAI--MGVSAVLHLGAFM   88 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHH--TTCSEEEECCCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHH--hCCCEEEECCccc
Confidence            456789999999999999999999999999999965432     222222 3444443333322  3899999998754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.12  E-value=0.023  Score=50.59  Aligned_cols=76  Identities=21%  Similarity=0.282  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-H-HHHH----hcCCCe-e--eeCCC----hHHHHHHh----
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-K-DLVT----SLNPNL-V--IDYNE----PEAMHSIA----  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~-~~~~----~lg~~~-v--~~~~~----~~~~~~i~----  249 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++. . . +...    ..+... .  .|..+    ....+.+.    
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            568999999999999999998888899999999664 2 2 2222    234321 1  34444    33222221    


Q ss_pred             -cCCCccEEEEcCCC
Q psy9949         250 -GAGPYDVILDAAGI  263 (383)
Q Consensus       250 -~~~g~d~v~d~~g~  263 (383)
                       ..+++|++|+++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence             23689999999985

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.12  E-value=0.011  Score=53.69  Aligned_cols=78  Identities=14%  Similarity=0.113  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHHhc----CCCee-eeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVTSL----NPNLV-IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~~l----g~~~v-~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      +++.+|||+||+|.+|..+++.+...|.+|++++++..   .+.+..+    +...+ .|..+.+....+.+..++|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            57789999999999999999988888999999996532   1222222    11111 2444433222222222689999


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      .+++..
T Consensus        92 h~A~~~   97 (335)
T 1rpn_A           92 NLAAQS   97 (335)
T ss_dssp             ECCSCC
T ss_pred             ECcccc
Confidence            998853

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.11  E-value=0.011  Score=51.71  Aligned_cols=75  Identities=17%  Similarity=0.140  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHH---HHhcCCCee-eeCCC-hHHHHHHh-cCCCccEEEEcCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDL---VTSLNPNLV-IDYNE-PEAMHSIA-GAGPYDVILDAAG  262 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~---~~~lg~~~v-~~~~~-~~~~~~i~-~~~g~d~v~d~~g  262 (383)
                      +++||+||+|++|..+++.+...|++|++++++. +.+.   +++.+.+.. ++..+ ..+.+.+. ..+++|++|+++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            4799999999999999999999999999998653 2222   223343321 23332 22333333 2368999999998


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        82 ~~   83 (254)
T 1zmt_A           82 FA   83 (254)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.10  E-value=0.019  Score=52.59  Aligned_cols=76  Identities=21%  Similarity=0.218  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-----hHHHH---HhcCCCee-eeCCChHHHHHHhcCCCccEEEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-----AKDLV---TSLNPNLV-IDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-----~~~~~---~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      ..+|+|+||+|.+|..++..+...|.+|++++++.     +...+   ...+...+ .|..+.+....+.+..++|+||.
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            35799999999999999999988899999999754     22222   23444332 35555333333333348999999


Q ss_pred             cCCCC
Q psy9949         260 AAGIP  264 (383)
Q Consensus       260 ~~g~~  264 (383)
                      +++..
T Consensus        90 ~a~~~   94 (346)
T 3i6i_A           90 TVGGE   94 (346)
T ss_dssp             CCCGG
T ss_pred             CCchh
Confidence            99864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.10  E-value=0.012  Score=53.55  Aligned_cols=76  Identities=20%  Similarity=0.146  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H--HHHHhcCC--C-ee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K--DLVTSLNP--N-LV--IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~--~~~~~lg~--~-~v--~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.. .  +.+.+++.  . ..  .|..+.+....+.+..++|+||.+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   82 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL   82 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            568999999999999999988888999999996532 1  23333321  1 11  244443322222222268999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus        83 A~~~   86 (345)
T 2z1m_A           83 AAQS   86 (345)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9853

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.10  E-value=0.021  Score=49.32  Aligned_cols=75  Identities=20%  Similarity=0.314  Sum_probs=49.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecCc-hHH-H---HHhcCCC-ee---eeCCChHHHHHHh-----cCCCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTT-CSGD-AKD-L---VTSLNPN-LV---IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~-~~~~-~~~-~---~~~lg~~-~v---~~~~~~~~~~~i~-----~~~g~  254 (383)
                      ++++|+||+|++|..+++.+...|++|+++ .++. +.+ .   +++.+.. ..   .|..+.+..+.+.     ..+++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999998899999998 5543 222 2   2223432 11   2444433222221     13689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        82 d~li~~Ag~~   91 (245)
T 2ph3_A           82 DTLVNNAGIT   91 (245)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.08  E-value=0.051  Score=48.27  Aligned_cols=77  Identities=19%  Similarity=0.192  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      .|.+++|.|++..+|.-+++++...|++|+...+.                  ..++.+.+   ..+|+||.++|.+.. 
T Consensus       164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~------------------t~~L~~~~---~~ADIVI~Avg~p~~-  221 (301)
T 1a4i_A          164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK------------------TAHLDEEV---NKGDILVVATGQPEM-  221 (301)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSSHHHHH---TTCSEEEECCCCTTC-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC------------------cccHHHHh---ccCCEEEECCCCccc-
Confidence            78999999965578999999999999998876532                  12233333   358999999999875 


Q ss_pred             ccccccccccCCCceEEEecCCC
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      ..  -+.++  ++..+++++.+.
T Consensus       222 I~--~~~vk--~GavVIDVgi~~  240 (301)
T 1a4i_A          222 VK--GEWIK--PGAIVIDCGINY  240 (301)
T ss_dssp             BC--GGGSC--TTCEEEECCCBC
T ss_pred             CC--HHHcC--CCcEEEEccCCC
Confidence            33  45678  899999997643

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.08  E-value=0.028  Score=52.30  Aligned_cols=78  Identities=22%  Similarity=0.185  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecC-ch----------------HHHHHhcCCCee---eeCCChHHH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSG-DA----------------KDLVTSLNPNLV---IDYNEPEAM  245 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~~~-~~----------------~~~~~~lg~~~v---~~~~~~~~~  245 (383)
                      ..++++||+||++++|++++..+.. .|++|+++.++ +.                .+.+++.|....   .|..+..-.
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4578999999999999988777777 89999988743 21                113344554322   244443322


Q ss_pred             ----HHHh-cCCCccEEEEcCCCC
Q psy9949         246 ----HSIA-GAGPYDVILDAAGIP  264 (383)
Q Consensus       246 ----~~i~-~~~g~d~v~d~~g~~  264 (383)
                          +.+. +.+++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccc
Confidence                2222 347899999999864

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.07  E-value=0.02  Score=50.33  Aligned_cols=77  Identities=19%  Similarity=0.306  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-HH-H---HHhcCCCe-e--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-KD-L---VTSLNPNL-V--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~~-~---~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|+++++ +.. .+ .   +++.+... .  .|..+.+..+.+.     ..++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999889999999987 432 22 2   22334431 1  3444433222222     2358


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus       100 ~d~vi~~Ag~~  110 (274)
T 1ja9_A          100 LDFVMSNSGME  110 (274)
T ss_dssp             EEEEECCCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.07  E-value=0.023  Score=49.98  Aligned_cols=78  Identities=21%  Similarity=0.305  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HH-H---HHhcCCC-ee--eeCCChHHHHHH----hc-CC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KD-L---VTSLNPN-LV--IDYNEPEAMHSI----AG-AG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~-~---~~~lg~~-~v--~~~~~~~~~~~i----~~-~~  252 (383)
                      ..+++++|+||+|++|..+++.+...|++|+++++.. + .+ .   ....+.. .+  .|..+....+.+    .+ .+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999988999999988433 2 11 1   1223322 22  344443322222    22 36


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|.++|..
T Consensus       103 ~id~li~nAg~~  114 (269)
T 3gk3_A          103 KVDVLINNAGIT  114 (269)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            899999999853

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.06  E-value=0.022  Score=49.69  Aligned_cols=76  Identities=18%  Similarity=0.314  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Cch-H-HHHH---hcCCC-ee--eeCCChHHHHHH-h----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDA-K-DLVT---SLNPN-LV--IDYNEPEAMHSI-A----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~-~-~~~~---~lg~~-~v--~~~~~~~~~~~i-~----~~~g  253 (383)
                      .+++++|+||+|++|..++..+...|++|+++++ +.. . +..+   +.+.. .+  .|..+.+....+ .    ..++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999988888999999987 432 2 2222   23332 11  244443322222 1    2358


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.05  E-value=0.024  Score=49.55  Aligned_cols=77  Identities=16%  Similarity=0.310  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chH-HHHH----hcCCCe-e--eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAK-DLVT----SLNPNL-V--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~-~~~~----~lg~~~-v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      .+++++|+||+|++|..++..+...|++|++++++ ++. +..+    +.+... .  .|..+.+..+.+    . ..++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            56789999999999999999888899999999964 322 2222    224321 1  344443322222    2 2357


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus        93 id~li~~Ag~~  103 (265)
T 1h5q_A           93 ISGLIANAGVS  103 (265)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            99999999853

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.04  E-value=0.022  Score=51.03  Aligned_cols=74  Identities=23%  Similarity=0.321  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-------h-HHHH---HhcCCCee-eeCCChHHHHHHhcCCCccE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-------A-KDLV---TSLNPNLV-IDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-------~-~~~~---~~lg~~~v-~~~~~~~~~~~i~~~~g~d~  256 (383)
                      ..+|+|+||+|.+|..++..+...|.+|++++++.       . .+.+   ...+...+ .|..+.+.....  ..++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~--~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKA--IKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH--HTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHH--HhCCCE
Confidence            35799999999999999988888899999998654       2 2222   23354322 355553322222  247999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      ||.+++..
T Consensus        80 vi~~a~~~   87 (307)
T 2gas_A           80 VICAAGRL   87 (307)
T ss_dssp             EEECSSSS
T ss_pred             EEECCccc
Confidence            99999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.04  E-value=0.013  Score=51.13  Aligned_cols=71  Identities=21%  Similarity=0.332  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCe-eeeCCChHHHHHH----h-cCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNL-VIDYNEPEAMHSI----A-GAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~-v~~~~~~~~~~~i----~-~~~g~d~v~d~  260 (383)
                      .+++++|+||+|++|.++++.+...|++|++++++.+ .+   +  ... ..|..+.+..+.+    . ..+++|++|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~--~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---G--FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---T--SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---c--ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999999986532 21   1  111 1344443322222    1 23679999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      +|.
T Consensus        95 Ag~   97 (253)
T 2nm0_A           95 AGV   97 (253)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            885

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.03  E-value=0.019  Score=51.23  Aligned_cols=76  Identities=21%  Similarity=0.330  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCc-hHH-HHHhc-----CCC-ee--eeCCChHHHHHHh-c---
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI---EVVTTCSGD-AKD-LVTSL-----NPN-LV--IDYNEPEAMHSIA-G---  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~---~Vi~~~~~~-~~~-~~~~l-----g~~-~v--~~~~~~~~~~~i~-~---  250 (383)
                      .++++||+||+|++|.+++..+...|+   +|+.++++. +.+ ..+++     +.. ..  .|..+.+-.+.+. +   
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999998877766666   999988664 322 22222     222 11  3444433333322 2   


Q ss_pred             -CCCccEEEEcCCC
Q psy9949         251 -AGPYDVILDAAGI  263 (383)
Q Consensus       251 -~~g~d~v~d~~g~  263 (383)
                       .+++|++|+++|.
T Consensus       112 ~~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 EFKDIDILVNNAGK  125 (287)
T ss_dssp             GGCSCCEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence             2579999999985

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.02  E-value=0.024  Score=49.35  Aligned_cols=76  Identities=25%  Similarity=0.342  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-c-hHH-HHH---hcCCC-ee--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-D-AKD-LVT---SLNPN-LV--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~-~~~-~~~---~lg~~-~v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..++..+...|++|++++++ . +.+ ..+   ..+.. .+  .|..+....+.+.     ..++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999888899999999865 3 332 222   22322 11  2444433222221     1258


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++|.++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.00  E-value=0.025  Score=51.88  Aligned_cols=75  Identities=15%  Similarity=0.276  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEEecCch-HH-HHHhcCCC--ee--eeCCChHHHHHHhcCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAW-DI-EVVTTCSGDA-KD-LVTSLNPN--LV--IDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~-G~-~Vi~~~~~~~-~~-~~~~lg~~--~v--~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      .+++|||+||+|.+|..+++.+... |. +|+++++++. .+ ....+...  ..  .|..+.+....+  ..++|+||.
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~--~~~~D~Vih   97 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA--LEGVDICIH   97 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH--TTTCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH--HhcCCEEEE
Confidence            5789999999999999998888877 98 9999997643 22 22333211  12  244443322222  247999999


Q ss_pred             cCCCC
Q psy9949         260 AAGIP  264 (383)
Q Consensus       260 ~~g~~  264 (383)
                      +++..
T Consensus        98 ~Aa~~  102 (344)
T 2gn4_A           98 AAALK  102 (344)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99864

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.99  E-value=0.082  Score=47.67  Aligned_cols=93  Identities=13%  Similarity=0.159  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC---c-hH-HHHHhc----CCC-eeeeCCC-hHHHHHHhcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG---D-AK-DLVTSL----NPN-LVIDYNE-PEAMHSIAGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~---~-~~-~~~~~l----g~~-~v~~~~~-~~~~~~i~~~~g~d  255 (383)
                      .+++++|+| +|++|.+++..+...|+ +|+++.++   . +. ++++++    +.. .++++++ .++.+.+   ..+|
T Consensus       153 ~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l---~~aD  228 (315)
T 3tnl_A          153 IGKKMTICG-AGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEI---AESV  228 (315)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH---HTCS
T ss_pred             cCCEEEEEC-CChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhh---cCCC
Confidence            688999999 69999999999999999 88888876   2 21 233332    321 2345554 2233322   3699


Q ss_pred             EEEEcCCCCcccc---cc--cccccccCCCceEEEe
Q psy9949         256 VILDAAGIPLDQI---NS--YLPFLKTGKFSKFVTL  286 (383)
Q Consensus       256 ~v~d~~g~~~~~~---~~--~~~~l~~~~~G~~v~~  286 (383)
                      +||+|++......   ..  -...+.  ++..++++
T Consensus       229 iIINaTp~Gm~~~~~~~p~~~~~~l~--~~~~V~Dl  262 (315)
T 3tnl_A          229 IFTNATGVGMKPFEGETLLPSADMLR--PELIVSDV  262 (315)
T ss_dssp             EEEECSSTTSTTSTTCCSCCCGGGCC--TTCEEEES
T ss_pred             EEEECccCCCCCCCCCCCCCcHHHcC--CCCEEEEe
Confidence            9999987432111   00  034556  66666665

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.99  E-value=0.029  Score=48.43  Aligned_cols=77  Identities=25%  Similarity=0.402  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-hHH-H---HHhcCCCe-e--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-AKD-L---VTSLNPNL-V--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~~~-~---~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++++ ++. +.+ .   +++.+... .  .|..+.+..+.+.     ..++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            568999999999999999999998999999984 433 322 2   22334331 1  2444433222221     1358


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus        84 ~d~vi~~Ag~~   94 (247)
T 2hq1_A           84 IDILVNNAGIT   94 (247)
T ss_dssp             CCEEEECC---
T ss_pred             CCEEEECCCCC
Confidence            99999999853

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.98  E-value=0.022  Score=49.67  Aligned_cols=78  Identities=23%  Similarity=0.345  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-h-HH---HHHhcCCC-ee--eeCCChHHHH----HHh-cCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-A-KD---LVTSLNPN-LV--IDYNEPEAMH----SIA-GAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~-~~---~~~~lg~~-~v--~~~~~~~~~~----~i~-~~~  252 (383)
                      .++++|||+||+|++|..++..+...|++|++++ ++. + .+   ..++.+.. ..  .|..+.+..+    .+. ..+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            5788999999999999999998888999999888 332 2 22   22334433 22  2444433222    222 236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|.++|..
T Consensus        91 ~id~lv~~Ag~~  102 (256)
T 3ezl_A           91 EIDVLVNNAGIT  102 (256)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            899999999853

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.98  E-value=0.013  Score=52.12  Aligned_cols=97  Identities=13%  Similarity=0.057  Sum_probs=59.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      +|||+||+|.+|..+++.+... |.+|++++++.. ...+...+...+ .|..+.+.....  ..++|+||.+++.....
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~--~~~~d~vi~~a~~~~~~   79 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA--FKGMDTVVFIPSIIHPS   79 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHH--TTTCSEEEECCCCCCSH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHH--HhCCCEEEEeCCCCccc
Confidence            5999999999999999888877 889999997643 222233343322 355554322222  35899999998864211


Q ss_pred             ------ccccccccccCCCceEEEecCC
Q psy9949         268 ------INSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       268 ------~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                            ..++++.+....-+++|.+++.
T Consensus        80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss~  107 (289)
T 3e48_A           80 FKRIPEVENLVYAAKQSGVAHIIFIGYY  107 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred             hhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence                  0111334431122578887654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.97  E-value=0.058  Score=47.61  Aligned_cols=77  Identities=19%  Similarity=0.115  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -.|.+++|.|++..+|.-+++++...|++|+...+..                  .++.+.++   .+|+||.++|.+..
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------------~~L~~~~~---~ADIVI~Avg~p~l  215 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------------KNLRHHVE---NADLLIVAVGKPGF  215 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------------SCHHHHHH---HCSEEEECSCCTTC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------------hhHHHHhc---cCCEEEECCCCcCc
Confidence            3789999999655789999999999999988875332                  22333332   48999999998875


Q ss_pred             cccccccccccCCCceEEEecCC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                       ..  -+.++  ++..+++++.+
T Consensus       216 -I~--~~~vk--~GavVIDVgi~  233 (288)
T 1b0a_A          216 -IP--GDWIK--EGAIVIDVGIN  233 (288)
T ss_dssp             -BC--TTTSC--TTCEEEECCCE
T ss_pred             -CC--HHHcC--CCcEEEEccCC
Confidence             22  45677  88899998754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.97  E-value=0.012  Score=51.66  Aligned_cols=78  Identities=24%  Similarity=0.397  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCc-hHHHHHh---cCCC-ee--eeCCChHHHHH----Hhc-C
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD---IEVVTTCSGD-AKDLVTS---LNPN-LV--IDYNEPEAMHS----IAG-A  251 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G---~~Vi~~~~~~-~~~~~~~---lg~~-~v--~~~~~~~~~~~----i~~-~  251 (383)
                      -++++++|+||+|++|..+++.+...|   ++|++++++. +.+.+.+   .+.. .+  .|..+.+..+.    +.+ .
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            356899999999999999999888889   8999999653 2222222   1222 12  24444322222    221 2


Q ss_pred             C--CccEEEEcCCCC
Q psy9949         252 G--PYDVILDAAGIP  264 (383)
Q Consensus       252 ~--g~d~v~d~~g~~  264 (383)
                      +  ++|++|.++|..
T Consensus        99 g~~~id~li~~Ag~~  113 (267)
T 1sny_A           99 KDQGLNVLFNNAGIA  113 (267)
T ss_dssp             GGGCCSEEEECCCCC
T ss_pred             CCCCccEEEECCCcC
Confidence            3  699999999853

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.96  E-value=0.0096  Score=50.91  Aligned_cols=75  Identities=9%  Similarity=0.079  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCC-hHHHHHHhc
Q psy9949         188 RDKRVLVLGA----------------SGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE-PEAMHSIAG  250 (383)
Q Consensus       188 ~~~~VlI~ga----------------~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~i~~  250 (383)
                      .|++|||+||                +|++|.++++.+...|++|+.+.++...+.  ..|. .+++..+ .++.+.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~--~~g~-~~~dv~~~~~~~~~v~~   83 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT--PPFV-KRVDVMTALEMEAAVNA   83 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--CTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc--CCCC-eEEccCcHHHHHHHHHH
Confidence            5789999998                589999999999999999999875542211  1122 3445444 233334333


Q ss_pred             -CCCccEEEEcCCCCc
Q psy9949         251 -AGPYDVILDAAGIPL  265 (383)
Q Consensus       251 -~~g~d~v~d~~g~~~  265 (383)
                       .+++|++|.++|...
T Consensus        84 ~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           84 SVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HGGGCSEEEECCBCCS
T ss_pred             hcCCCCEEEECCcccC
Confidence             467999999998654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.95  E-value=0.006  Score=53.76  Aligned_cols=72  Identities=24%  Similarity=0.278  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +++|||+||+|++|..+++.+...|++|+++++++....  ..+...+ .|..+.+....+.  .++|++|+++|..
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~--~~~D~vi~~Ag~~   75 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMV--AGCDGIVHLGGIS   75 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHH--TTCSEEEECCSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHH--cCCCEEEECCCCc
Confidence            468999999999999999988888999999996642211  1111111 3444433333332  3799999998863

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.94  E-value=0.033  Score=49.05  Aligned_cols=77  Identities=22%  Similarity=0.289  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-HH----HHHhcCCCe-e--eeCCChHHHHHH----hc-CC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-KD----LVTSLNPNL-V--IDYNEPEAMHSI----AG-AG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~~----~~~~lg~~~-v--~~~~~~~~~~~i----~~-~~  252 (383)
                      ..++++||+||+|++|.++++.+...|++|+++. ++++ .+    .+.+.+... +  .|..+.+..+.+    .+ .+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999999998875 4432 22    222333321 1  244443322222    21 36


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++|.++|.
T Consensus       104 ~id~li~nAg~  114 (272)
T 4e3z_A          104 RLDGLVNNAGI  114 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999985

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.93  E-value=0.024  Score=51.56  Aligned_cols=72  Identities=19%  Similarity=0.243  Sum_probs=46.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+|||+||+|.+|..+++.+...|.+|++++++. +.+.+.+.+...+ .|..+.+....+  ..++|+||.+++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~--~~~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA--LRGLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH--TTTCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH--HcCCCEEEECCcc
Confidence            3799999999999999999988999999999653 2222222233222 244443322222  2479999999884

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.93  E-value=0.023  Score=50.72  Aligned_cols=36  Identities=22%  Similarity=0.143  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~  223 (383)
                      .+++++|+||+|++|.++++.+...|++|++++ ++.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~   44 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   44 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCH
Confidence            578999999999999999999999999999998 764

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=95.91  E-value=0.0092  Score=51.19  Aligned_cols=77  Identities=14%  Similarity=0.218  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCC-hHHHHHHhc
Q psy9949         188 RDKRVLVLGA----------------SGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNE-PEAMHSIAG  250 (383)
Q Consensus       188 ~~~~VlI~ga----------------~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~i~~  250 (383)
                      .|++|||+||                +|.+|.+.++.+...|++|+.+.++.........+. .+++... ....+.+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~-~~~~v~s~~em~~~v~~   80 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNL-SIREITNTKDLLIEMQE   80 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCe-EEEEHhHHHHHHHHHHH
Confidence            5789999998                788999999999999999999997643211001122 3444443 333344433


Q ss_pred             -CCCccEEEEcCCCCc
Q psy9949         251 -AGPYDVILDAAGIPL  265 (383)
Q Consensus       251 -~~g~d~v~d~~g~~~  265 (383)
                       .+++|++|.+++...
T Consensus        81 ~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           81 RVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HGGGCSEEEECSBCCS
T ss_pred             hcCCCCEEEEcCcccc
Confidence             367999999988654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.90  E-value=0.018  Score=50.33  Aligned_cols=75  Identities=27%  Similarity=0.407  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCch-H-HHHHhcCCCe-e--eeCCChHHHHHHh-----cCCCccE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGDA-K-DLVTSLNPNL-V--IDYNEPEAMHSIA-----GAGPYDV  256 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~~-~-~~~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~d~  256 (383)
                      +++++|+||++++|.++++.+...  |++|+.+.+++. . +..++++... .  .|..+.+..+.+.     ..+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578999999999999888766555  468888886643 3 3334444321 1  3444443322222     2368999


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      +|+++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999986

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.90  E-value=0.022  Score=50.36  Aligned_cols=76  Identities=21%  Similarity=0.353  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCC-ee--eeCCChHHHHHHh-----cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPN-LV--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~-~v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      .+++++|+||+|++|..++..+...|++|++++++. +.+    ...+.+.. ..  .|..+.+..+.+.     ..+.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999888888899999998653 222    22223432 12  3444433222221     12579


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++|.++|.
T Consensus       113 d~li~~Ag~  121 (279)
T 3ctm_A          113 DVFVANAGV  121 (279)
T ss_dssp             SEEEECGGG
T ss_pred             CEEEECCcc
Confidence            999999874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.90  E-value=0.022  Score=49.89  Aligned_cols=75  Identities=21%  Similarity=0.335  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHH----HhcCCC-ee--eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLV----TSLNPN-LV--IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~----~~lg~~-~v--~~~~~~~~~~~i----~-~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|+++++.+.  .+.+    .+.+.. .+  .|..+.+..+.+    . ..++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999875432  2222    222221 11  344443332222    2 1358


Q ss_pred             ccEEEEcCC
Q psy9949         254 YDVILDAAG  262 (383)
Q Consensus       254 ~d~v~d~~g  262 (383)
                      +|++|.++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.88  E-value=0.043  Score=48.15  Aligned_cols=77  Identities=22%  Similarity=0.311  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-hH-HHH---HhcCCC-ee--eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-AK-DLV---TSLNPN-LV--IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~~-~~~---~~lg~~-~v--~~~~~~~~~~~i~-----~~~g  253 (383)
                      .+++++|+||+|++|..+++.+...|++|++.+ ++. +. +.+   .+.+.. .+  .|..+.+-...+.     ..++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            567999999999999999999999999997766 432 22 222   223332 22  3444433222221     2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|.++|..
T Consensus       105 id~li~nAg~~  115 (267)
T 4iiu_A          105 WYGVVSNAGIA  115 (267)
T ss_dssp             CSEEEECCCCC
T ss_pred             ccEEEECCCCC
Confidence            99999999853

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=95.88  E-value=0.041  Score=43.17  Aligned_cols=78  Identities=18%  Similarity=0.134  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeee-eCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVI-DYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~-~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .-.++|+|.| .|.+|..+++.++..|.+|+++++++ +.+.+++.|...+. |..+.+..... ...++|+++-+++..
T Consensus         5 ~~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a-~i~~ad~vi~~~~~~   82 (140)
T 3fwz_A            5 DICNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLA-HLECAKWLILTIPNG   82 (140)
T ss_dssp             CCCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHT-TGGGCSEEEECCSCH
T ss_pred             cCCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhc-CcccCCEEEEECCCh
Confidence            4457899999 89999999999999999999999664 55666777765332 33333322211 124789999999876


Q ss_pred             cc
Q psy9949         265 LD  266 (383)
Q Consensus       265 ~~  266 (383)
                      ..
T Consensus        83 ~~   84 (140)
T 3fwz_A           83 YE   84 (140)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.87  E-value=0.037  Score=50.58  Aligned_cols=74  Identities=19%  Similarity=0.190  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH---HHHHhc------CCCee--eeCCChHHHHHHhcCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK---DLVTSL------NPNLV--IDYNEPEAMHSIAGAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~---~~~~~l------g~~~v--~~~~~~~~~~~i~~~~g~  254 (383)
                      .+.+|||+||+|.+|..++..+...|.+|+++++..  ..   +.+...      ....+  .|..+.+....+  ..++
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~  101 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV--MKGV  101 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH--TTTC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH--hcCC
Confidence            467999999999999999999998999999999643  12   222221      11122  244443332232  2489


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |+||.+++.
T Consensus       102 d~Vih~A~~  110 (351)
T 3ruf_A          102 DHVLHQAAL  110 (351)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999985

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.86  E-value=0.014  Score=53.23  Aligned_cols=36  Identities=22%  Similarity=0.143  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~  223 (383)
                      .++++||+||+|++|.++++.+...|++|++++ ++.
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~   81 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   81 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence            568999999999999999999999999999998 764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.85  E-value=0.024  Score=54.15  Aligned_cols=77  Identities=21%  Similarity=0.360  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH----HHHHhcCCCee-eeCCChHHHH----HHhc-CCC-ccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK----DLVTSLNPNLV-IDYNEPEAMH----SIAG-AGP-YDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~----~~~~~lg~~~v-~~~~~~~~~~----~i~~-~~g-~d~  256 (383)
                      +++++||+||+|++|..+++.+...|++|+.+.++...    +...+.+...+ .|..+.+..+    .+.+ .++ +|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            57899999999999999988888889999988865322    23344554322 3444433222    2222 345 999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +|+++|..
T Consensus       292 lV~nAGv~  299 (454)
T 3u0b_A          292 LVNNAGIT  299 (454)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99999864

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.85  E-value=0.0039  Score=53.85  Aligned_cols=71  Identities=25%  Similarity=0.305  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHH----HHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAM----HSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~----~~i~~~~g~d~v~d~~g~  263 (383)
                      +++++|+||+|++|..+++.+...|++|++++++.+.   .++- ....|..+.+..    +++...+++|++|.++|.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~   76 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---EDLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV   76 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---SSSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccc---cceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence            4689999999999999998888889999999866441   1110 011344443322    222223589999999885

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.84  E-value=0.034  Score=49.60  Aligned_cols=73  Identities=16%  Similarity=0.131  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchH---HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAK---DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~---~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .++|+|+||+|.+|..+++.+...| .+|++++++...   ..+...+...+ .|..+.+.....  ..++|+||.+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~--~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELA--LNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHH--HTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHH--HhcCCEEEEeCCC
Confidence            5689999999999999998888778 899999966432   22233454332 345443322222  2479999999874

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.80  E-value=0.02  Score=48.22  Aligned_cols=92  Identities=13%  Similarity=0.173  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH----HhcCCC-ee--eeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV----TSLNPN-LV--IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~----~~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .++++||-.| +|. |..++.+++. +.+|++++.++ ..+.+    +..|.. .+  +..+..+   .+.....+|+|+
T Consensus        54 ~~~~~vLDlG-cG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~~~~~~~D~v~  127 (204)
T 3njr_A           54 RRGELLWDIG-GGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA---ALADLPLPEAVF  127 (204)
T ss_dssp             CTTCEEEEET-CTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG---GGTTSCCCSEEE
T ss_pred             CCCCEEEEec-CCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh---hcccCCCCCEEE
Confidence            7889999999 554 8889999988 88999999554 33433    345544 22  3332222   122335799999


Q ss_pred             EcCCCCcccccccccccccCCCceEEEe
Q psy9949         259 DAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...+........+.+.++  ++|+++..
T Consensus       128 ~~~~~~~~~l~~~~~~Lk--pgG~lv~~  153 (204)
T 3njr_A          128 IGGGGSQALYDRLWEWLA--PGTRIVAN  153 (204)
T ss_dssp             ECSCCCHHHHHHHHHHSC--TTCEEEEE
T ss_pred             ECCcccHHHHHHHHHhcC--CCcEEEEE
Confidence            766543312222267788  99999875

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.78  E-value=0.017  Score=57.40  Aligned_cols=77  Identities=25%  Similarity=0.324  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---------Cc-hH----HHHHhcCCCeeeeCCChHHHHHHhc---
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS---------GD-AK----DLVTSLNPNLVIDYNEPEAMHSIAG---  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~---------~~-~~----~~~~~lg~~~v~~~~~~~~~~~i~~---  250 (383)
                      .+++++|+||++++|.+++..+...|++|+++++         +. +.    +.+++.+...+.|..+..-.+.+.+   
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            6789999999999999999999889999999865         21 11    1223445555566655432222222   


Q ss_pred             --CCCccEEEEcCCCC
Q psy9949         251 --AGPYDVILDAAGIP  264 (383)
Q Consensus       251 --~~g~d~v~d~~g~~  264 (383)
                        .+++|++|+++|..
T Consensus        98 ~~~g~iDiLVnnAGi~  113 (613)
T 3oml_A           98 KAFGRVDILVNNAGIL  113 (613)
T ss_dssp             -------CEECCCCCC
T ss_pred             HHCCCCcEEEECCCCC
Confidence              25799999999863

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.77  E-value=0.046  Score=48.25  Aligned_cols=90  Identities=16%  Similarity=0.212  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcCCC-eeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLNPN-LVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++++++|+| +|++|.+++..+...|++|+++.++. + .+++++++.. .+ +..+  + +.+.+ +++|+++++++..
T Consensus       118 ~~k~vlViG-aGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~-~~~~--~-~~~~~-~~~DivVn~t~~~  191 (271)
T 1nyt_A          118 PGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI-QALS--M-DELEG-HEFDLIINATSSG  191 (271)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE-EECC--S-GGGTT-CCCSEEEECCSCG
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe-eEec--H-HHhcc-CCCCEEEECCCCC
Confidence            678999999 58999999999999999998888664 3 2455555431 11 1111  1 12222 5799999999975


Q ss_pred             cccc---cccccccccCCCceEEEe
Q psy9949         265 LDQI---NSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       265 ~~~~---~~~~~~l~~~~~G~~v~~  286 (383)
                      ....   .. ..++.  ++..++++
T Consensus       192 ~~~~~~~i~-~~~l~--~~~~v~D~  213 (271)
T 1nyt_A          192 ISGDIPAIP-SSLIH--PGIYCYDM  213 (271)
T ss_dssp             GGTCCCCCC-GGGCC--TTCEEEES
T ss_pred             CCCCCCCCC-HHHcC--CCCEEEEe
Confidence            4311   10 23455  66666665

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.76  E-value=0.065  Score=48.00  Aligned_cols=90  Identities=20%  Similarity=0.209  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCC--eeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPN--LVIDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~--~v~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      .+++++|+| +|++|.+++..+...|+ +|++..++. + .+++++++..  .+.+.  .++.+   ...++|+||+|++
T Consensus       140 ~~~~vlVlG-aGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~~~~~---~~~~aDivIn~t~  213 (297)
T 2egg_A          140 DGKRILVIG-AGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL--AEAET---RLAEYDIIINTTS  213 (297)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--HHHHH---TGGGCSEEEECSC
T ss_pred             CCCEEEEEC-cHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--HHHHh---hhccCCEEEECCC
Confidence            678999999 79999999999999998 888888764 3 3466666652  23221  11111   2357999999998


Q ss_pred             CCcccc-----cccccccccCCCceEEEe
Q psy9949         263 IPLDQI-----NSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       263 ~~~~~~-----~~~~~~l~~~~~G~~v~~  286 (383)
                      ......     .. ..++.  ++..++++
T Consensus       214 ~~~~~~~~~~~i~-~~~l~--~~~~v~D~  239 (297)
T 2egg_A          214 VGMHPRVEVQPLS-LERLR--PGVIVSDI  239 (297)
T ss_dssp             TTCSSCCSCCSSC-CTTCC--TTCEEEEC
T ss_pred             CCCCCCCCCCCCC-HHHcC--CCCEEEEc
Confidence            654311     11 34566  66677776

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.72  E-value=0.042  Score=49.48  Aligned_cols=88  Identities=14%  Similarity=0.187  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-  266 (383)
                      .+.+|.|.| .|.+|..+++.++.+|++|++.++..+.+.+.+.|+..+      ++.+-+   ...|+|+.++..... 
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~------~l~ell---~~aDvV~l~~p~~~~t  210 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFV------DLETLL---KESDVVTIHVPLVEST  210 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEEC------CHHHHH---HHCSEEEECCCCSTTT
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCcccc------CHHHHH---hhCCEEEEecCCChHH
Confidence            578999999 899999999999999999999986654455667776321      122222   248999998875331 


Q ss_pred             ---cccccccccccCCCceEEEec
Q psy9949         267 ---QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ---~~~~~~~~l~~~~~G~~v~~~  287 (383)
                         .....++.++  +++.++.++
T Consensus       211 ~~li~~~~l~~mk--~ga~lin~a  232 (307)
T 1wwk_A          211 YHLINEERLKLMK--KTAILINTS  232 (307)
T ss_dssp             TTCBCHHHHHHSC--TTCEEEECS
T ss_pred             hhhcCHHHHhcCC--CCeEEEECC
Confidence               1111256778  888888874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=95.71  E-value=0.036  Score=48.58  Aligned_cols=77  Identities=22%  Similarity=0.274  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCc-h--HHHH----HhcCCCee---eeCCChHHHH----HHh-c
Q psy9949         188 RDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGD-A--KDLV----TSLNPNLV---IDYNEPEAMH----SIA-G  250 (383)
Q Consensus       188 ~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~-~--~~~~----~~lg~~~v---~~~~~~~~~~----~i~-~  250 (383)
                      .+++++|+||+  +++|..+++.+...|++|+++++.. +  .+.+    ...+....   .|..+.+..+    .+. .
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            67899999998  8999999998888999999988542 2  2222    23343311   3444433222    222 2


Q ss_pred             CCCccEEEEcCCCC
Q psy9949         251 AGPYDVILDAAGIP  264 (383)
Q Consensus       251 ~~g~d~v~d~~g~~  264 (383)
                      .+++|++|.++|..
T Consensus        99 ~g~id~li~nAg~~  112 (267)
T 3gdg_A           99 FGQIDAFIANAGAT  112 (267)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            36899999999853

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.71  E-value=0.022  Score=51.85  Aligned_cols=77  Identities=16%  Similarity=0.169  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+.+|||+||+|.+|..++..+...|.+|+++++...  .+.+.++....+  .|..+.+....+.+...+|+||.++|.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            4678999999999999999988888999999996532  222222211112  244444333333322359999999885


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus       100 ~  100 (333)
T 2q1w_A          100 Y  100 (333)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.69  E-value=0.075  Score=46.70  Aligned_cols=95  Identities=15%  Similarity=0.140  Sum_probs=63.4

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCchHHHHHhcCCCeeeeCCCh
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGDAKDLVTSLNPNLVIDYNEP  242 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~  242 (383)
                      +||+...+...+.+. .+.   -.|++++|.|++..+|..+++++...  |++|+...+..                  .
T Consensus       138 ~PcTp~gi~~ll~~~-~i~---l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------------~  195 (281)
T 2c2x_A          138 LPCTPRGIVHLLRRY-DIS---IAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------------R  195 (281)
T ss_dssp             CCHHHHHHHHHHHHT-TCC---CTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------------S
T ss_pred             CCChHHHHHHHHHHc-CCC---CCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------------h
Confidence            344444444444433 221   37899999996556799999999988  88888764331                  2


Q ss_pred             HHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         243 EAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       243 ~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ++.+.+   ..+|++|.++|.+.. ..  -+.++  ++..+++++.+
T Consensus       196 ~L~~~~---~~ADIVI~Avg~p~~-I~--~~~vk--~GavVIDVgi~  234 (281)
T 2c2x_A          196 DLPALT---RQADIVVAAVGVAHL-LT--ADMVR--PGAAVIDVGVS  234 (281)
T ss_dssp             CHHHHH---TTCSEEEECSCCTTC-BC--GGGSC--TTCEEEECCEE
T ss_pred             HHHHHH---hhCCEEEECCCCCcc-cC--HHHcC--CCcEEEEccCC
Confidence            233332   358999999998875 33  45677  88888888654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.68  E-value=0.034  Score=47.93  Aligned_cols=76  Identities=14%  Similarity=0.203  Sum_probs=49.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEecCc-hHH-HHHh---cCCC-ee--eeCCChHHHHHH----h
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDI-------EVVTTCSGD-AKD-LVTS---LNPN-LV--IDYNEPEAMHSI----A  249 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~-------~Vi~~~~~~-~~~-~~~~---lg~~-~v--~~~~~~~~~~~i----~  249 (383)
                      +++++|+||+|++|..+++.+...|+       +|++++++. +.+ ...+   .+.. ..  .|..+.+..+.+    .
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999888888898       899988764 222 2222   2322 11  344443322222    2


Q ss_pred             -cCCCccEEEEcCCCC
Q psy9949         250 -GAGPYDVILDAAGIP  264 (383)
Q Consensus       250 -~~~g~d~v~d~~g~~  264 (383)
                       ..+++|++|.++|..
T Consensus        82 ~~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HHTSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEEcCCcC
Confidence             235799999999853

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.67  E-value=0.036  Score=48.42  Aligned_cols=76  Identities=13%  Similarity=0.205  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEEecCch-HH-HHHhc-----CCC-ee--eeCCChHHH----HHHhc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKA---WDIEVVTTCSGDA-KD-LVTSL-----NPN-LV--IDYNEPEAM----HSIAG  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~---~G~~Vi~~~~~~~-~~-~~~~l-----g~~-~v--~~~~~~~~~----~~i~~  250 (383)
                      ++++++|+||+|++|..++..+..   .|++|++++++.. .+ ...++     +.. ..  .|..+.+-.    +.+.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            568899999999999998887776   8999999997642 22 22222     322 11  344443322    22322


Q ss_pred             ---CCCcc--EEEEcCCC
Q psy9949         251 ---AGPYD--VILDAAGI  263 (383)
Q Consensus       251 ---~~g~d--~v~d~~g~  263 (383)
                         .+++|  ++|+++|.
T Consensus        85 ~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             ccccccCCccEEEECCcc
Confidence               24678  99999885

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.67  E-value=0.039  Score=49.56  Aligned_cols=70  Identities=16%  Similarity=0.195  Sum_probs=47.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|||+||+|.+|..++..+...|.+|++++++.....+.  +...+ .|.. .+....+  ..++|+||.+++..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~Dl~-~~~~~~~--~~~~d~Vih~a~~~   73 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAIN--DYEYRVSDYT-LEDLINQ--LNDVDAVVHLAATR   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------CCEEEECCCC-HHHHHHH--TTTCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCC--ceEEEEcccc-HHHHHHh--hcCCCEEEEccccC
Confidence            5899999999999999999999999999999763221122  33222 2333 2222222  24899999998864

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.65  E-value=0.052  Score=52.61  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=53.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCch-----HHH---HHhcCCCe-e--eeCCChHHHHHHhcCCC
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDA-----KDL---VTSLNPNL-V--IDYNEPEAMHSIAGAGP  253 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~-----~~~---~~~lg~~~-v--~~~~~~~~~~~i~~~~g  253 (383)
                      ++++.++||+||+|++|..++..+...|+ +|+.+.++..     .++   +++.|..- +  .|..+.+-...+.+.+.
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            36789999999999999999988888899 6888876531     122   23345431 1  34455443333333367


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|+||.++|..
T Consensus       336 ld~VVh~AGv~  346 (511)
T 2z5l_A          336 PNAVFHTAGIL  346 (511)
T ss_dssp             CSEEEECCCCC
T ss_pred             CcEEEECCccc
Confidence            99999999853

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.64  E-value=0.17  Score=46.21  Aligned_cols=91  Identities=16%  Similarity=0.196  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-HC-CCEEEEEecCc--hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLK-AW-DIEVVTTCSGD--AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~-~~-G~~Vi~~~~~~--~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .-+|.|.| +|.+|...++.++ .. +++++++++..  +. ++++++|...+++  +  +. .+.+..++|+|+.|+..
T Consensus         8 ~~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~--~~-~~l~~~~~D~V~i~tp~   81 (346)
T 3cea_A            8 PLRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--N--YK-DMIDTENIDAIFIVAPT   81 (346)
T ss_dssp             CEEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--C--HH-HHHTTSCCSEEEECSCG
T ss_pred             cceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--C--HH-HHhcCCCCCEEEEeCCh
Confidence            35799999 7999998877776 44 67888877433  33 3556778754432  2  22 33333479999999987


Q ss_pred             CcccccccccccccCCCceEEEecCC
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ....... ..+++  . |+-|.+..|
T Consensus        82 ~~h~~~~-~~al~--~-G~~v~~eKp  103 (346)
T 3cea_A           82 PFHPEMT-IYAMN--A-GLNVFCEKP  103 (346)
T ss_dssp             GGHHHHH-HHHHH--T-TCEEEECSC
T ss_pred             HhHHHHH-HHHHH--C-CCEEEEcCC
Confidence            6543332 56666  5 555555443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.61  E-value=0.043  Score=47.24  Aligned_cols=76  Identities=22%  Similarity=0.339  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecCc-hHH-H---HHhcCCCe-e--eeCCChHHHHHHh-----cCCCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTT-CSGD-AKD-L---VTSLNPNL-V--IDYNEPEAMHSIA-----GAGPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~-~~~~-~~~-~---~~~lg~~~-v--~~~~~~~~~~~i~-----~~~g~  254 (383)
                      +++++|+||+|++|..+++.+...|++|+++ .++. +.+ .   +++.+... .  .|..+.+..+.+.     ..+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999986 4543 222 2   22233221 1  3444433222221     23589


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++|.++|..
T Consensus        81 d~li~~Ag~~   90 (244)
T 1edo_A           81 DVVVNNAGIT   90 (244)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999853

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.60  E-value=0.039  Score=54.65  Aligned_cols=76  Identities=32%  Similarity=0.461  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----------chHH-HH---HhcCCCeeeeCCCh----HHHHHHh
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG----------DAKD-LV---TSLNPNLVIDYNEP----EAMHSIA  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~----------~~~~-~~---~~lg~~~v~~~~~~----~~~~~i~  249 (383)
                      .+++++|+||++++|.+.++.+...|++|++.+++          ++.+ .+   ++.|...+.|..+.    .+.+++.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999988643          2222 22   23344344454443    2333333


Q ss_pred             -cCCCccEEEEcCCC
Q psy9949         250 -GAGPYDVILDAAGI  263 (383)
Q Consensus       250 -~~~g~d~v~d~~g~  263 (383)
                       ..+.+|++|+++|.
T Consensus        87 ~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence             34789999999985

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.60  E-value=0.024  Score=52.08  Aligned_cols=77  Identities=14%  Similarity=0.229  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchHHHHHhcC-CCeeeeCCChHHHHHHhcC---CCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAKDLVTSLN-PNLVIDYNEPEAMHSIAGA---GPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~~~~~~lg-~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g  262 (383)
                      ++.+|||+||+|.+|..++..+...| .+|+++.+.........+. .....|..+.+..+.+.+.   +++|+||.+++
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~  124 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA  124 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence            45679999999999999999888889 7999998654321112221 1111233333333344332   37999999988


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus       125 ~~  126 (357)
T 2x6t_A          125 CS  126 (357)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.58  E-value=0.041  Score=49.58  Aligned_cols=73  Identities=21%  Similarity=0.324  Sum_probs=50.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHHHH---HhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKDLV---TSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~~~---~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ++|+|+||+|.+|..++..+...|.+|++++++.  +.+.+   ...+...+ .|..+.+.....  ..++|+||.+++.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a--~~~~d~vi~~a~~   89 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVEL--MKKVDVVISALAF   89 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHH--HTTCSEEEECCCG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHH--HcCCCEEEECCch
Confidence            4799999999999999999988899999999654  22222   23454322 355553322222  2479999999985


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        90 ~   90 (318)
T 2r6j_A           90 P   90 (318)
T ss_dssp             G
T ss_pred             h
Confidence            4

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=95.58  E-value=0.011  Score=51.06  Aligned_cols=93  Identities=20%  Similarity=0.213  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH----HhcCCCee-eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV----TSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~----~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      +++++||..| +| .|..++.+++..+.+|++++.++ ..+.+    ...+...+ +...+  ....+....++|+|+.+
T Consensus        90 ~~~~~vLdiG-~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d--~~~~~~~~~~fD~Ii~~  165 (235)
T 1jg1_A           90 KPGMNILEVG-TG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD--GSKGFPPKAPYDVIIVT  165 (235)
T ss_dssp             CTTCCEEEEC-CT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC--GGGCCGGGCCEEEEEEC
T ss_pred             CCCCEEEEEe-CC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC--cccCCCCCCCccEEEEC
Confidence            7889999998 55 79999999998778999998543 33433    33554333 11111  11112223459999987


Q ss_pred             CCCCcccccccccccccCCCceEEEe
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ..-...... +.+.++  ++|+++..
T Consensus       166 ~~~~~~~~~-~~~~L~--pgG~lvi~  188 (235)
T 1jg1_A          166 AGAPKIPEP-LIEQLK--IGGKLIIP  188 (235)
T ss_dssp             SBBSSCCHH-HHHTEE--EEEEEEEE
T ss_pred             CcHHHHHHH-HHHhcC--CCcEEEEE
Confidence            665544333 278899  99998775

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.58  E-value=0.019  Score=51.50  Aligned_cols=73  Identities=18%  Similarity=0.261  Sum_probs=48.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|||+||+|.+|..++..+...  |.+|++++++. +.+...  +...+ .|..+.+....+.+..++|+||.+++..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   79 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL   79 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence            57999999999999998888776  78999998653 222222  22222 3444433333332223799999999864

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=95.58  E-value=0.013  Score=49.62  Aligned_cols=92  Identities=22%  Similarity=0.139  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc-hHHHHH----hcCCCee--eeCCChHHHHHHhcCCCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD-AKDLVT----SLNPNLV--IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~-~~~~~~----~lg~~~v--~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      +++++||..| +| .|..+..+++..|  .+|++++.++ ..+.++    ..+...+  ...+   ....+...+.+|+|
T Consensus        76 ~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~~~~~~fD~v  150 (215)
T 2yxe_A           76 KPGMKVLEIG-TG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD---GTLGYEPLAPYDRI  150 (215)
T ss_dssp             CTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC---GGGCCGGGCCEEEE
T ss_pred             CCCCEEEEEC-CC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC---cccCCCCCCCeeEE
Confidence            7889999999 55 5999999999876  6999999554 334333    3443332  2221   11111223579999


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEe
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +.+.+-...... +.++++  ++|+++..
T Consensus       151 ~~~~~~~~~~~~-~~~~L~--pgG~lv~~  176 (215)
T 2yxe_A          151 YTTAAGPKIPEP-LIRQLK--DGGKLLMP  176 (215)
T ss_dssp             EESSBBSSCCHH-HHHTEE--EEEEEEEE
T ss_pred             EECCchHHHHHH-HHHHcC--CCcEEEEE
Confidence            987665544333 278899  99999876

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=95.57  E-value=0.04  Score=51.80  Aligned_cols=78  Identities=19%  Similarity=0.216  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEecCc-h-------------H---HHHHhcCCCee---eeCCChHH
Q psy9949         187 PRDKRVLVLGASGGVGTM--AVQLLKAWDIEVVTTCSGD-A-------------K---DLVTSLNPNLV---IDYNEPEA  244 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~--ai~la~~~G~~Vi~~~~~~-~-------------~---~~~~~lg~~~v---~~~~~~~~  244 (383)
                      ..++++||+||++++|++  .+......|++|++++++. .             .   +.+++.|....   .|..+..-
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            678999999999999998  4444445599999988532 1             1   13344554322   24444332


Q ss_pred             ----HHHHhc-CCCccEEEEcCCCC
Q psy9949         245 ----MHSIAG-AGPYDVILDAAGIP  264 (383)
Q Consensus       245 ----~~~i~~-~~g~d~v~d~~g~~  264 (383)
                          .+.+.+ .+++|++++++|..
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccc
Confidence                233332 46799999998864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.57  E-value=0.033  Score=51.70  Aligned_cols=75  Identities=13%  Similarity=0.099  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ...+|||+||+|.+|..+++.+...|.+|++++++... ......+...+ .|..+.+....+.  .++|+||.+++..
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~Vih~A~~~  104 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT--EGVDHVFNLAADM  104 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH--TTCSEEEECCCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHh--CCCCEEEECceec
Confidence            34689999999999999999888889999999965422 11111222222 3444433222222  4899999998853

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.55  E-value=0.056  Score=49.24  Aligned_cols=88  Identities=13%  Similarity=0.074  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-  266 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++....+.+.+.|+..    .  ++.+.+   ...|+|+.++..... 
T Consensus       164 ~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~--~l~ell---~~aDvV~l~~P~t~~t  233 (335)
T 2g76_A          164 NGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQ----L--PLEEIW---PLCDFITVHTPLLPST  233 (335)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEE----C--CHHHHG---GGCSEEEECCCCCTTT
T ss_pred             CcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCcee----C--CHHHHH---hcCCEEEEecCCCHHH
Confidence            578999999 99999999999999999999998654444566777642    1  233222   258999998876431 


Q ss_pred             ---cccccccccccCCCceEEEec
Q psy9949         267 ---QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ---~~~~~~~~l~~~~~G~~v~~~  287 (383)
                         .....++.++  +++.+|.++
T Consensus       234 ~~li~~~~l~~mk--~gailIN~a  255 (335)
T 2g76_A          234 TGLLNDNTFAQCK--KGVRVVNCA  255 (335)
T ss_dssp             TTSBCHHHHTTSC--TTEEEEECS
T ss_pred             HHhhCHHHHhhCC--CCcEEEECC
Confidence               1111266788  888888875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.54  E-value=0.027  Score=51.10  Aligned_cols=75  Identities=19%  Similarity=0.127  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHH-h----cCCC-eee---eCCChHHHHHHhc-CCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVT-S----LNPN-LVI---DYNEPEAMHSIAG-AGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~-~----lg~~-~v~---~~~~~~~~~~i~~-~~g~d  255 (383)
                      .++.+|||+||+|.+|..++..+...|.+|++++++.. .+.+. .    .+.. .++   |..+.+   .+.+ ..++|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~d   85 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG---AYDEVIKGAA   85 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT---TTTTTTTTCS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH---HHHHHHcCCC
Confidence            46789999999999999999988888999999997642 22111 1    1211 112   333222   1222 23799


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      +||.+++..
T Consensus        86 ~vih~A~~~   94 (342)
T 1y1p_A           86 GVAHIASVV   94 (342)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEeCCCC
Confidence            999998854

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.52  E-value=0.025  Score=51.94  Aligned_cols=76  Identities=16%  Similarity=0.114  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhc----CCCee-eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSL----NPNLV-IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~l----g~~~v-~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++. +. .....+    +...+ .|..+......+.+..++|+||.+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   87 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   87 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence            457899999999999999999888899999999653 22 222221    12111 344443333332222258999999


Q ss_pred             CCC
Q psy9949         261 AGI  263 (383)
Q Consensus       261 ~g~  263 (383)
                      ++.
T Consensus        88 A~~   90 (357)
T 1rkx_A           88 AAQ   90 (357)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            984

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.52  E-value=0.042  Score=54.41  Aligned_cols=76  Identities=25%  Similarity=0.403  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhcCCCeeeeCCCh-----HHHHHHh-cCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSLNPNLVIDYNEP-----EAMHSIA-GAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~lg~~~v~~~~~~-----~~~~~i~-~~~g~d~v~  258 (383)
                      .+++++|+||++++|.++++.+...|++|++.++....   +.+++.|...+....+-     .+.+.+. +.+++|++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            46889999999999999999999999999988743222   22334454333222222     1222222 246899999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +++|.
T Consensus       401 nNAGi  405 (604)
T 2et6_A          401 NNAGI  405 (604)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99985

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.51  E-value=0.024  Score=51.47  Aligned_cols=77  Identities=10%  Similarity=0.122  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-HHHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-KDLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++.. . .+.+..+....+  .|..+.+....+.+..++|+||.++|.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   98 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA   98 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            467899999999999999998888899999999643 2 222222221112  244443322222211179999999985


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        99 ~   99 (330)
T 2pzm_A           99 Y   99 (330)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.50  E-value=0.016  Score=51.59  Aligned_cols=65  Identities=23%  Similarity=0.357  Sum_probs=45.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++..+|||+||+|.+|..++..+...|.+|+++++..             .|..+.+....+.+..++|+||.+++..
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~   74 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------LDITNVLAVNKFFNEKKPNVVINCAAHT   74 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-------------CCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence            4667999999999999999999888899999998751             2333322222222112689999998854

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.50  E-value=0.037  Score=50.44  Aligned_cols=76  Identities=18%  Similarity=0.192  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-----------HHHHHh-cC--CCee-eeCCChHHHHHHhcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-----------KDLVTS-LN--PNLV-IDYNEPEAMHSIAGAGP  253 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-----------~~~~~~-lg--~~~v-~~~~~~~~~~~i~~~~g  253 (383)
                      +.+|||+||+|.+|..+++.+...|.+|+++++..+           .+.+.+ .+  ...+ .|..+.+....+.+..+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            368999999999999999988888999999985321           122222 12  2211 34444333333322237


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|+||.+++..
T Consensus        82 ~d~vih~A~~~   92 (348)
T 1ek6_A           82 FMAVIHFAGLK   92 (348)
T ss_dssp             EEEEEECCSCC
T ss_pred             CCEEEECCCCc
Confidence            99999999854

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.49  E-value=0.062  Score=49.11  Aligned_cols=75  Identities=20%  Similarity=0.226  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-----HH-HHHhc------CCCee-eeCCChHHHHHHhcCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-----KD-LVTSL------NPNLV-IDYNEPEAMHSIAGAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-----~~-~~~~l------g~~~v-~~~~~~~~~~~i~~~~g~  254 (383)
                      .+.+|||+||+|.+|..++..+...|.+|+++++...     .+ +...+      +...+ .|..+.+....+.  .++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~  103 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--AGV  103 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--TTC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh--cCC
Confidence            4568999999999999999998888999999986431     11 11111      22111 2444433222222  389


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |+||.+++..
T Consensus       104 d~vih~A~~~  113 (352)
T 1sb8_A          104 DYVLHQAALG  113 (352)
T ss_dssp             SEEEECCSCC
T ss_pred             CEEEECCccc
Confidence            9999999853

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.47  E-value=0.045  Score=52.18  Aligned_cols=90  Identities=17%  Similarity=0.024  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.|++|+|.| .|.+|..+++.++.+|++|++..++... ..+...|.. +.     ++.+.   ....|+|+-+++...
T Consensus       255 l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~-----~l~el---l~~aDiVi~~~~t~~  324 (479)
T 1v8b_A          255 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV-----TLDEI---VDKGDFFITCTGNVD  324 (479)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHH---TTTCSEEEECCSSSS
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ec-----CHHHH---HhcCCEEEECCChhh
Confidence            4789999999 8999999999999999999999966543 234455552 21     22222   246899999987665


Q ss_pred             ccccccccccccCCCceEEEecC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ......++.|+  +++.++.++.
T Consensus       325 lI~~~~l~~MK--~gailiNvgr  345 (479)
T 1v8b_A          325 VIKLEHLLKMK--NNAVVGNIGH  345 (479)
T ss_dssp             SBCHHHHTTCC--TTCEEEECSS
T ss_pred             hcCHHHHhhcC--CCcEEEEeCC
Confidence            43322377888  8999998864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.45  E-value=0.057  Score=46.84  Aligned_cols=34  Identities=29%  Similarity=0.284  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC  220 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~  220 (383)
                      -.+++++|+||++++|.++++.+...|++|++++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~   38 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHY   38 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence            3678999999999999999999999999998875

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.43  E-value=0.057  Score=48.63  Aligned_cols=74  Identities=18%  Similarity=0.313  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-------hHHHH---HhcCCCee-eeCCChHHHHHHhcCCCccEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-------AKDLV---TSLNPNLV-IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-------~~~~~---~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      ..+|+|+||+|.+|..++..+...|.+|++++++.       +.+.+   ...+...+ .|..+.+.....  ..++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a--~~~~d~v   81 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSV--LKQVDIV   81 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH--HTTCSEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHH--HcCCCEE
Confidence            45799999999999999998888899999999654       12222   23344322 355553322222  2479999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.+++..
T Consensus        82 i~~a~~~   88 (321)
T 3c1o_A           82 ISALPFP   88 (321)
T ss_dssp             EECCCGG
T ss_pred             EECCCcc
Confidence            9999864

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.40  E-value=0.059  Score=48.66  Aligned_cols=88  Identities=17%  Similarity=0.154  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-  266 (383)
                      .|.+|.|.| .|.+|..+++.++.+|++|++.++..+...+.+.|+..   .   ++.+.+.   ..|+|+.++..... 
T Consensus       141 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~---~---~l~ell~---~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          141 AGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKA---V---SLEELLK---NSDVISLHVTVSKDA  210 (313)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEE---C---CHHHHHH---HCSEEEECCCCCTTS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCcee---c---CHHHHHh---hCCEEEEeccCChHH
Confidence            578999999 89999999999999999999998665444456677542   1   2222222   48999998875431 


Q ss_pred             ---cccccccccccCCCceEEEec
Q psy9949         267 ---QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ---~~~~~~~~l~~~~~G~~v~~~  287 (383)
                         .....++.++  +++.+|.++
T Consensus       211 ~~li~~~~l~~mk--~ga~lIn~a  232 (313)
T 2ekl_A          211 KPIIDYPQFELMK--DNVIIVNTS  232 (313)
T ss_dssp             CCSBCHHHHHHSC--TTEEEEESS
T ss_pred             HHhhCHHHHhcCC--CCCEEEECC
Confidence               1111156677  888888874

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=95.39  E-value=0.049  Score=49.51  Aligned_cols=75  Identities=17%  Similarity=0.168  Sum_probs=48.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc---hHH---HHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD---AKD---LVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~---~~~---~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      .+|||+||+|.+|..++..+...|.+|+++++..   ..+   .+...+...+  .|..+......+.+..++|+||.++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            3699999999999999998888999999998532   222   2222231222  2444433333332223599999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      +..
T Consensus        82 ~~~   84 (347)
T 1orr_A           82 GQV   84 (347)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            854

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.38  E-value=0.045  Score=52.43  Aligned_cols=91  Identities=16%  Similarity=0.076  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHH-HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKD-LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -.|++|.|.| .|.+|..+++.++.+|++|++.+++.... .+...|.. +.     ++.+.   ....|+|+-+++...
T Consensus       275 L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~~-----~l~el---l~~aDiVi~~~~t~~  344 (494)
T 3d64_A          275 IAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-VV-----TMEYA---ADKADIFVTATGNYH  344 (494)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHH---TTTCSEEEECSSSSC
T ss_pred             cCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-eC-----CHHHH---HhcCCEEEECCCccc
Confidence            3789999999 89999999999999999999998664332 33344542 21     22322   246899999986655


Q ss_pred             ccccccccccccCCCceEEEecCC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ......++.++  ++..++.++..
T Consensus       345 lI~~~~l~~MK--~gAilINvgrg  366 (494)
T 3d64_A          345 VINHDHMKAMR--HNAIVCNIGHF  366 (494)
T ss_dssp             SBCHHHHHHCC--TTEEEEECSSS
T ss_pred             ccCHHHHhhCC--CCcEEEEcCCC
Confidence            43322367888  88899888653

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=95.37  E-value=0.023  Score=47.85  Aligned_cols=91  Identities=19%  Similarity=0.158  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH----HhcCCCee--eeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV----TSLNPNLV--IDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~----~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      +++++||-.| +| .|..+..+++. +.+|++++.++ ..+.+    ...+..++  +..+.   .+.....+.+|+|+.
T Consensus        76 ~~~~~vLdiG-~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~D~i~~  149 (210)
T 3lbf_A           76 TPQSRVLEIG-TG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG---WQGWQARAPFDAIIV  149 (210)
T ss_dssp             CTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCCGGGCCEEEEEE
T ss_pred             CCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc---ccCCccCCCccEEEE
Confidence            7899999999 55 58888888888 78999999554 33433    33454432  22221   111122357999998


Q ss_pred             cCCCCcccccccccccccCCCceEEEe
Q psy9949         260 AAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       260 ~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...-...... +.+.++  ++|+++..
T Consensus       150 ~~~~~~~~~~-~~~~L~--pgG~lv~~  173 (210)
T 3lbf_A          150 TAAPPEIPTA-LMTQLD--EGGILVLP  173 (210)
T ss_dssp             SSBCSSCCTH-HHHTEE--EEEEEEEE
T ss_pred             ccchhhhhHH-HHHhcc--cCcEEEEE
Confidence            7665554333 378899  99999875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=95.37  E-value=0.028  Score=51.83  Aligned_cols=74  Identities=19%  Similarity=0.258  Sum_probs=44.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhc-------CCC-ee--eeCCChHHHHHHhcCCCccE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSL-------NPN-LV--IDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~l-------g~~-~v--~~~~~~~~~~~i~~~~g~d~  256 (383)
                      .+|||+||+|.+|..+++.+...|.+|++++++...   +.+..+       +.. .+  .|..+.+....+.+..++|+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCE
Confidence            579999999999999999888889999999865321   212221       111 11  24444332222222226899


Q ss_pred             EEEcCCC
Q psy9949         257 ILDAAGI  263 (383)
Q Consensus       257 v~d~~g~  263 (383)
                      ||.++|.
T Consensus        82 vih~A~~   88 (372)
T 1db3_A           82 VYNLGAM   88 (372)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999885

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.37  E-value=0.081  Score=48.43  Aligned_cols=94  Identities=15%  Similarity=0.069  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-------------eeCCChHH--HHHHhc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-------------IDYNEPEA--MHSIAG  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-------------~~~~~~~~--~~~i~~  250 (383)
                      -+|++|.|.| .|.+|+.+++.++.+|++|++.+.+. +.+++++++++.+             +.....+.  .+.+..
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~  251 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVART  251 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCHHHHhh
Confidence            3789999999 99999999999999999999666443 3445555665322             11000000  011111


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEE
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~  285 (383)
                       -+.++|++++.++.....+ .+.+.  .+|.++.
T Consensus       252 -lk~~iVie~AN~p~t~~eA-~~~L~--~~gIlv~  282 (355)
T 1c1d_A          252 -LDCSVVAGAANNVIADEAA-SDILH--ARGILYA  282 (355)
T ss_dssp             -CCCSEECCSCTTCBCSHHH-HHHHH--HTTCEEC
T ss_pred             -CCCCEEEECCCCCCCCHHH-HHHHH--hCCEEEE
Confidence             1477888888777654232 56677  6776654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.35  E-value=0.025  Score=52.48  Aligned_cols=75  Identities=16%  Similarity=0.180  Sum_probs=47.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhc----------CCCee-eeCCChHHHHHHhcCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSL----------NPNLV-IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~l----------g~~~v-~~~~~~~~~~~i~~~~g~d  255 (383)
                      ++|||+||+|.+|..++..+...|.+|++++++...   +.+..+          +...+ .|..+.+....+.+..++|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            579999999999999999888889999999865321   111111          21111 2444433222222222689


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      +||.+++..
T Consensus       109 ~Vih~A~~~  117 (381)
T 1n7h_A          109 EVYNLAAQS  117 (381)
T ss_dssp             EEEECCSCC
T ss_pred             EEEECCccc
Confidence            999999854

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.35  E-value=0.026  Score=49.94  Aligned_cols=71  Identities=20%  Similarity=0.302  Sum_probs=48.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|+|+||+|.+|..+++.+...  |.+|++++++. +.+.+...+...+ .|..+.+....+  ..++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~--~~~~d~vi~~a~~   76 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKA--FAGVSKLLFISGP   76 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHH--TTTCSEEEECCCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHH--HhcCCEEEEcCCC
Confidence            6999999999999999888877  88999999653 3332333343322 344443322222  2479999999885

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.34  E-value=0.097  Score=46.18  Aligned_cols=87  Identities=23%  Similarity=0.330  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCC--CeeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNP--NLVIDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~--~~v~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      .+++++|+| +|++|.+++..+...|+ +|+++.++. + .+++++++.  ..+..+.  +    +.. ..+|+||++++
T Consensus       119 ~~k~~lvlG-aGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~----l~~-~~~DivInaTp  190 (272)
T 3pwz_A          119 RNRRVLLLG-AGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE--A----LEG-QSFDIVVNATS  190 (272)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--G----GTT-CCCSEEEECSS
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--H----hcc-cCCCEEEECCC
Confidence            678999999 79999999998888997 888888764 3 345566553  1222222  1    111 57999999987


Q ss_pred             CCccc----ccccccccccCCCceEEEe
Q psy9949         263 IPLDQ----INSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       263 ~~~~~----~~~~~~~l~~~~~G~~v~~  286 (383)
                      .....    ..  .+.++  ++..++++
T Consensus       191 ~gm~~~~~~i~--~~~l~--~~~~V~Dl  214 (272)
T 3pwz_A          191 ASLTADLPPLP--ADVLG--EAALAYEL  214 (272)
T ss_dssp             GGGGTCCCCCC--GGGGT--TCSEEEES
T ss_pred             CCCCCCCCCCC--HHHhC--cCCEEEEe
Confidence            54211    12  34566  77777776

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.30  E-value=0.053  Score=48.56  Aligned_cols=74  Identities=16%  Similarity=0.258  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc------hHHHHH---hcCCCee-eeCCChHHHHHHhcCCCccEEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD------AKDLVT---SLNPNLV-IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~------~~~~~~---~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      ..+|+|+||+|.+|..++..+...|.+|++++++.      +.+.+.   ..+...+ .|..+.+.....  ..++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~--~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA--LKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH--HTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHH--HhCCCEEE
Confidence            35799999999999999999888899999999652      222222   2343322 355553322222  24799999


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      .+++..
T Consensus        82 ~~a~~~   87 (313)
T 1qyd_A           82 SALAGG   87 (313)
T ss_dssp             ECCCCS
T ss_pred             ECCccc
Confidence            998864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.28  E-value=0.043  Score=49.62  Aligned_cols=74  Identities=18%  Similarity=0.263  Sum_probs=48.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|||+||+|.+|..+++.+...|.+|+++++...  .+.+.. +...+ .|..+.+....+.+..++|+||.+++..
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~   78 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE-GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS   78 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCT-TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCC-CcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence            37999999999999999999888999999985432  111111 22211 3444433333332224899999999854

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.27  E-value=0.021  Score=51.37  Aligned_cols=70  Identities=23%  Similarity=0.236  Sum_probs=39.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +.+|||+||+|.+|..+++.+...|.+|++++++....     + ....|..+.+....+.+..++|+||.++|..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   71 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-----K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAER   71 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------CHHHHHHHCCSEEEECC---
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-----C-eEEecCCCHHHHHHHHHhhCCCEEEECCccc
Confidence            46899999999999999999888899999998643221     1 1112222221111211112589999998753

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.25  E-value=0.048  Score=48.71  Aligned_cols=74  Identities=16%  Similarity=0.263  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-------hHHHH---HhcCCCee-eeCCChHHHHHHhcCCCccEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-------AKDLV---TSLNPNLV-IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-------~~~~~---~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      ..+|+|+||+|.+|..++..+...|.+|++++++.       +.+.+   ...+...+ .|..+.+......  .++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~--~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV--KNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH--HTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHH--cCCCEE
Confidence            45799999999999999999988899999998652       11112   23344322 3555433222221  379999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.+++..
T Consensus        82 i~~a~~~   88 (308)
T 1qyc_A           82 ISTVGSL   88 (308)
T ss_dssp             EECCCGG
T ss_pred             EECCcch
Confidence            9999864

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=95.21  E-value=0.023  Score=51.91  Aligned_cols=77  Identities=17%  Similarity=0.178  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc---hHHHHHhcC----CCee-eeCCChHHHHHHhcCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD---AKDLVTSLN----PNLV-IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~---~~~~~~~lg----~~~v-~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      .+.+|||+||+|.+|..++..+...|  .+|++.++..   ..+.+..+.    ...+ .|..+.+....+.+..++|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V  102 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI  102 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence            45789999999999999999888888  5888887542   222222221    1111 344454433333333469999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.+++..
T Consensus       103 ih~A~~~  109 (346)
T 4egb_A          103 VNFAAES  109 (346)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9998853

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.21  E-value=0.13  Score=45.69  Aligned_cols=92  Identities=17%  Similarity=0.235  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHhcC----CCeeeeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTSLN----PNLVIDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~lg----~~~v~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      -.+++++|+| +|++|.+++..+...|+ +|+++.++. +. +++++++    ...+......++.+.+.   ++|+||+
T Consensus       125 l~~k~vlVlG-aGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~---~~DiVIn  200 (283)
T 3jyo_A          125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIA---AADGVVN  200 (283)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHH---HSSEEEE
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHh---cCCEEEE
Confidence            3678999999 69999999999988999 788888764 32 3444432    11222222122333332   5899999


Q ss_pred             cCCCCcc-----cccccccccccCCCceEEEe
Q psy9949         260 AAGIPLD-----QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       260 ~~g~~~~-----~~~~~~~~l~~~~~G~~v~~  286 (383)
                      |++....     ...  ...+.  ++..++++
T Consensus       201 aTp~Gm~~~~~~pi~--~~~l~--~~~~v~Dl  228 (283)
T 3jyo_A          201 ATPMGMPAHPGTAFD--VSCLT--KDHWVGDV  228 (283)
T ss_dssp             CSSTTSTTSCSCSSC--GGGCC--TTCEEEEC
T ss_pred             CCCCCCCCCCCCCCC--HHHhC--CCCEEEEe
Confidence            9864221     112  34556  66666665

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.20  E-value=0.072  Score=48.88  Aligned_cols=89  Identities=13%  Similarity=0.124  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL--  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~--  265 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++..+.+.+.+.|+..+     .++.+-+.   ..|+|+-++....  
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~-----~~l~ell~---~aDiV~l~~Plt~~t  229 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVA-----ESKDALFE---QSDVLSVHLRLNDET  229 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEEC-----SSHHHHHH---HCSEEEECCCCSTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEe-----CCHHHHHh---hCCEEEEeccCcHHH
Confidence            478999999 999999999999999999999987655555666776422     12232222   4799998876432  


Q ss_pred             --ccccccccccccCCCceEEEec
Q psy9949         266 --DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 --~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                        ......++.++  +++.+|.++
T Consensus       230 ~~li~~~~l~~mk--~gailIN~a  251 (352)
T 3gg9_A          230 RSIITVADLTRMK--PTALFVNTS  251 (352)
T ss_dssp             TTCBCHHHHTTSC--TTCEEEECS
T ss_pred             HHhhCHHHHhhCC--CCcEEEECC
Confidence              11111266778  888888885

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.20  E-value=0.033  Score=49.19  Aligned_cols=71  Identities=15%  Similarity=0.238  Sum_probs=46.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|+|+||+|.+|..+++.+...  |.+|++++++. +.+.+...+...+ .|..+.+....+  ..++|+||.+++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSA--LQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHH--TTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHH--HhCCCEEEEeCCC
Confidence            4899999999999999888877  88999999653 3232333343322 344443322222  2479999999885

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.07  E-value=0.041  Score=50.74  Aligned_cols=75  Identities=23%  Similarity=0.204  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc-hHHHH-HhcCCCee-eeCC-ChHHHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD-AKDLV-TSLNPNLV-IDYN-EPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~-~~~~~-~~lg~~~v-~~~~-~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      ...+|||+||+|.+|..+++.+... |.+|++++++. +...+ ...+...+ .|.. +......+.  .++|+||.+++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~--~~~d~Vih~A~  100 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHV--KKCDVILPLVA  100 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHH--HHCSEEEECBC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHh--ccCCEEEEcCc
Confidence            3568999999999999998888877 89999999654 32222 22233222 3444 433333322  27999999888


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus       101 ~~  102 (372)
T 3slg_A          101 IA  102 (372)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.05  E-value=0.45  Score=43.82  Aligned_cols=92  Identities=15%  Similarity=0.226  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC----c-h---------HHHHHhcCCCeeeeCCChHHHHHHhcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG----D-A---------KDLVTSLNPNLVIDYNEPEAMHSIAGAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~----~-~---------~~~~~~lg~~~v~~~~~~~~~~~i~~~~  252 (383)
                      ++.+|+|.| +|..|..+++++..+|+ +|+.++++    . +         .+++++...    .....++.+.+.   
T Consensus       191 ~~~kVVv~G-AGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~~~~~~L~eav~---  262 (388)
T 1vl6_A          191 EEVKVVVNG-IGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----ERLSGDLETALE---  262 (388)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----TCCCSCHHHHHT---
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----cCchhhHHHHHc---
Confidence            678999999 89999999999999999 89998865    2 2         234443321    011233455443   


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceEEEecCCC
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      ++|++|-+++ +......+++.|+  ++-.++.+.+|.
T Consensus       263 ~ADVlIG~Sa-p~l~t~emVk~Ma--~~pIIfalSNPt  297 (388)
T 1vl6_A          263 GADFFIGVSR-GNILKPEWIKKMS--RKPVIFALANPV  297 (388)
T ss_dssp             TCSEEEECSC-SSCSCHHHHTTSC--SSCEEEECCSSS
T ss_pred             cCCEEEEeCC-CCccCHHHHHhcC--CCCEEEEcCCCC
Confidence            5799999887 4432222366677  665666665554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=94.98  E-value=0.038  Score=50.26  Aligned_cols=75  Identities=19%  Similarity=0.243  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chH----HHHHhc------CCC-ee--eeCCChHHHHHHhc---C
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAK----DLVTSL------NPN-LV--IDYNEPEAMHSIAG---A  251 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~----~~~~~l------g~~-~v--~~~~~~~~~~~i~~---~  251 (383)
                      +++++|+||+|++|..++..+...|++|+.+.++ ++.    +..+..      +.. .+  .|..+.+-.+.+.+   .
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            5789999999999999999999999988777633 221    222221      122 12  35444433333322   2


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +.+|++|+++|.
T Consensus        82 g~iD~lVnnAG~   93 (327)
T 1jtv_A           82 GRVDVLVCNAGL   93 (327)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999985

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.95  E-value=0.02  Score=49.64  Aligned_cols=70  Identities=20%  Similarity=0.294  Sum_probs=44.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHH-HhcC-CCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHS-IAGA-GPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~-i~~~-~g~d~v~d~~g~~  264 (383)
                      ++|||+||+|++|..++..+...|++|++++++....     ......|..+....+. +... +++|++|.++|..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----EADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----ECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc-----cccccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            4799999999999999998888999999999653210     0010111111111111 1222 5799999999854

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=94.92  E-value=0.042  Score=50.35  Aligned_cols=74  Identities=15%  Similarity=0.183  Sum_probs=47.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc---hHHHHHhc--CCC-ee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD---AKDLVTSL--NPN-LV--IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~---~~~~~~~l--g~~-~v--~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|||+||+|.+|..+++.+... |.+|+++++..   +.+.+.++  +.. .+  .|..+.+....+.+..++|+||.++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLA   81 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            5999999999999988877766 78999998643   22222222  111 12  2444433333332224799999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        82 ~~~   84 (361)
T 1kew_A           82 AES   84 (361)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=94.91  E-value=0.12  Score=49.78  Aligned_cols=79  Identities=22%  Similarity=0.371  Sum_probs=52.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCch-----HH---HHHhcCCCe-e--eeCCChHHHHHH-hc--
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDA-----KD---LVTSLNPNL-V--IDYNEPEAMHSI-AG--  250 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~-----~~---~~~~lg~~~-v--~~~~~~~~~~~i-~~--  250 (383)
                      ++++.++||+||+|++|..++..+...|+ +|+.+.++..     .+   .+++.|..- +  .|..+.+-...+ ..  
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            37789999999999999998888877899 5888886532     12   233445431 1  344443333222 22  


Q ss_pred             -CCCccEEEEcCCCC
Q psy9949         251 -AGPYDVILDAAGIP  264 (383)
Q Consensus       251 -~~g~d~v~d~~g~~  264 (383)
                       .+.+|.||.++|..
T Consensus       303 ~~g~ld~VIh~AG~~  317 (486)
T 2fr1_A          303 DDVPLSAVFHAAATL  317 (486)
T ss_dssp             TTSCEEEEEECCCCC
T ss_pred             hcCCCcEEEECCccC
Confidence             24689999999853

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=94.87  E-value=0.051  Score=50.18  Aligned_cols=75  Identities=17%  Similarity=0.180  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhc----------CCCee-eeCCChHHHHHHhcCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSL----------NPNLV-IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~l----------g~~~v-~~~~~~~~~~~i~~~~g~d  255 (383)
                      .+|||+||+|.+|..+++.+...|.+|++++++...   +.+..+          +...+ .|..+.+....+.+..++|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            579999999999999999888889999999865321   111111          11111 2444433222222222589


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      +||.++|..
T Consensus       105 ~vih~A~~~  113 (375)
T 1t2a_A          105 EIYNLGAQS  113 (375)
T ss_dssp             EEEECCSCC
T ss_pred             EEEECCCcc
Confidence            999999864

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=94.84  E-value=0.3  Score=44.15  Aligned_cols=89  Identities=17%  Similarity=0.181  Sum_probs=53.9

Q ss_pred             EEEEEcCCchHHHHH-HHHHHHCCCEEEEEecCc--hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         191 RVLVLGASGGVGTMA-VQLLKAWDIEVVTTCSGD--AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       191 ~VlI~ga~g~vG~~a-i~la~~~G~~Vi~~~~~~--~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +|.|.| +|.+|... +..++..+.+++++++..  +. ++++++|...++  .+  +. .+.+...+|+|+.++.....
T Consensus         2 ~vgiiG-~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~~--~~-~~l~~~~~D~V~i~tp~~~h   75 (332)
T 2glx_A            2 RWGLIG-ASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--TS--VE-ELVGDPDVDAVYVSTTNELH   75 (332)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--SC--HH-HHHTCTTCCEEEECSCGGGH
T ss_pred             eEEEEc-ccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--CC--HH-HHhcCCCCCEEEEeCChhHh
Confidence            588999 79999875 543333778888887443  22 455677764332  22  22 23333479999999987654


Q ss_pred             cccccccccccCCCceEEEecCC
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .... ..++.  . |+-|.+..|
T Consensus        76 ~~~~-~~al~--~-Gk~v~~ekP   94 (332)
T 2glx_A           76 REQT-LAAIR--A-GKHVLCEKP   94 (332)
T ss_dssp             HHHH-HHHHH--T-TCEEEECSS
T ss_pred             HHHH-HHHHH--C-CCeEEEeCC
Confidence            3332 45666  4 555556443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=94.82  E-value=0.03  Score=51.41  Aligned_cols=76  Identities=14%  Similarity=0.166  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-----CEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcC-CCccEEEEcC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWD-----IEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGA-GPYDVILDAA  261 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G-----~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~-~g~d~v~d~~  261 (383)
                      +.+|||+||+|.+|..+++.+...|     .+|++++++.........+...+ .|..+.+....+.+. ..+|+||.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a   80 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT   80 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence            3579999999999999998888888     89999996532211111122211 244443322222222 2399999998


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      +..
T Consensus        81 ~~~   83 (364)
T 2v6g_A           81 WAN   83 (364)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            853

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=94.80  E-value=0.079  Score=49.01  Aligned_cols=75  Identities=19%  Similarity=0.184  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchH--HHHH-hcCCCee-eeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAK--DLVT-SLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~--~~~~-~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      .+.+|||+||+|.+|..++..+...| .+|+++++....  +.+. .-+...+ .|..+.+....+  ..++|+||.+++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~--~~~~d~Vih~A~  108 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASL--QDEYDYVFHLAT  108 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHC--CSCCSEEEECCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHH--hhCCCEEEECCC
Confidence            45789999999999999999998899 899999865321  1111 1111111 233333222221  248999999998


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus       109 ~~  110 (377)
T 2q1s_A          109 YH  110 (377)
T ss_dssp             CS
T ss_pred             cc
Confidence            64

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=94.79  E-value=0.13  Score=45.59  Aligned_cols=86  Identities=17%  Similarity=0.290  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCC---CeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNP---NLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~---~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      .+++++|+| +|++|.+++..+...|+ +|++..++. + .+++++++.   ..+..+.+      +  ..++|+||+|+
T Consensus       125 ~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------l--~~~aDiIInaT  195 (281)
T 3o8q_A          125 KGATILLIG-AGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------L--KQSYDVIINST  195 (281)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------C--CSCEEEEEECS
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------h--cCCCCEEEEcC
Confidence            678999999 69999999988888997 888888764 3 244454442   12232211      1  14799999998


Q ss_pred             CCCccc----ccccccccccCCCceEEEe
Q psy9949         262 GIPLDQ----INSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       262 g~~~~~----~~~~~~~l~~~~~G~~v~~  286 (383)
                      +.....    ..  .+.++  ++..++++
T Consensus       196 p~gm~~~~~~l~--~~~l~--~~~~V~Dl  220 (281)
T 3o8q_A          196 SASLDGELPAID--PVIFS--SRSVCYDM  220 (281)
T ss_dssp             CCCC----CSCC--GGGEE--EEEEEEES
T ss_pred             cCCCCCCCCCCC--HHHhC--cCCEEEEe
Confidence            764321    11  34556  66666665

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=94.76  E-value=0.42  Score=43.98  Aligned_cols=138  Identities=17%  Similarity=0.152  Sum_probs=77.0

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHC-CCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         190 KRVLVLGASGGVGTM-AVQLLKAW-DIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~-ai~la~~~-G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      -+|.|.| .|.+|.. .+..++.. +++++++++.......+.++...++  .+  +. .+.+...+|+|+.|+....-.
T Consensus         8 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~--~~-~ll~~~~~D~V~i~tp~~~H~   81 (364)
T 3e82_A            8 INIALIG-YGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVI--AS--PE-AAVQHPDVDLVVIASPNATHA   81 (364)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEE--SC--HH-HHHTCTTCSEEEECSCGGGHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEE--CC--HH-HHhcCCCCCEEEEeCChHHHH
Confidence            4799999 8999985 66666655 6799988865544333455443333  22  22 333445799999998876543


Q ss_pred             ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER  347 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (383)
                      ... ..++.   .|+-|.+..|...+       ......-.....        -.|..+..++.......+..+.+++++
T Consensus        82 ~~~-~~al~---aGk~Vl~EKPla~~-------~~e~~~l~~~a~--------~~g~~~~v~~~~r~~p~~~~~~~~i~~  142 (364)
T 3e82_A           82 PLA-RLALN---AGKHVVVDKPFTLD-------MQEARELIALAE--------EKQRLLSVFHNRRWDSDYLGIRQVIEQ  142 (364)
T ss_dssp             HHH-HHHHH---TTCEEEECSCSCSS-------HHHHHHHHHHHH--------HTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             HHH-HHHHH---CCCcEEEeCCCcCC-------HHHHHHHHHHHH--------HhCCeEEEEeecccCHHHHHHHHHHHc
Confidence            332 55555   45667776554222       111111111111        112222222222335678888899999


Q ss_pred             CCccc
Q psy9949         348 GQIKP  352 (383)
Q Consensus       348 g~l~~  352 (383)
                      |.+-.
T Consensus       143 g~iG~  147 (364)
T 3e82_A          143 GTLGA  147 (364)
T ss_dssp             TTTCS
T ss_pred             CCCcc
Confidence            88744

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=94.73  E-value=0.15  Score=49.14  Aligned_cols=78  Identities=22%  Similarity=0.370  Sum_probs=51.5

Q ss_pred             CCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc----h-HH---HHHhcCCCee---eeCCChHHHHHHh-c-
Q psy9949         187 PRD--KRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD----A-KD---LVTSLNPNLV---IDYNEPEAMHSIA-G-  250 (383)
Q Consensus       187 ~~~--~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~----~-~~---~~~~lg~~~v---~~~~~~~~~~~i~-~-  250 (383)
                      +++  .++||+||+|++|..+++.+...|+ +|+.+.++.    . .+   .+++.|..-.   .|..+.+-...+. . 
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            455  8999999999999999888888899 777777542    1 12   2344564322   2444433333332 2 


Q ss_pred             --CCCccEEEEcCCCC
Q psy9949         251 --AGPYDVILDAAGIP  264 (383)
Q Consensus       251 --~~g~d~v~d~~g~~  264 (383)
                        .+++|++|.++|..
T Consensus       315 ~~~g~ld~vVh~AGv~  330 (496)
T 3mje_A          315 PEDAPLTAVFHSAGVA  330 (496)
T ss_dssp             CTTSCEEEEEECCCCC
T ss_pred             HHhCCCeEEEECCccc
Confidence              24799999999864

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=94.71  E-value=0.36  Score=44.12  Aligned_cols=137  Identities=16%  Similarity=0.118  Sum_probs=76.6

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHC-CCEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGT-MAVQLLKAW-DIEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~-~ai~la~~~-G~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      -+|.|.| +|.+|. ..+..++.. +++++++++..  + .++++++|...+     .++. .+.+...+|+|+.|+...
T Consensus        28 ~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-----~~~~-~ll~~~~~D~V~i~tp~~  100 (350)
T 3rc1_A           28 IRVGVIG-CADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-----EGYP-ALLERDDVDAVYVPLPAV  100 (350)
T ss_dssp             EEEEEES-CCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-----ESHH-HHHTCTTCSEEEECCCGG
T ss_pred             eEEEEEc-CcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-----CCHH-HHhcCCCCCEEEECCCcH
Confidence            4799999 899998 556655555 77888887433  2 245567776533     1233 333345799999999876


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKF  344 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  344 (383)
                      .-.... ..++.   .|+-|.+..|...+       ......-....        .-.|..+..++.......+..+.++
T Consensus       101 ~h~~~~-~~al~---aGk~Vl~EKP~a~~-------~~ea~~l~~~a--------~~~g~~~~v~~~~R~~p~~~~~k~~  161 (350)
T 3rc1_A          101 LHAEWI-DRALR---AGKHVLAEKPLTTD-------RPQAERLFAVA--------RERGLLLMENFMFLHHPQHRQVADM  161 (350)
T ss_dssp             GHHHHH-HHHHH---TTCEEEEESSSCSS-------HHHHHHHHHHH--------HHTTCCEEEECGGGGCTHHHHHHHH
T ss_pred             HHHHHH-HHHHH---CCCcEEEeCCCCCC-------HHHHHHHHHHH--------HHhCCEEEEEecccCCHHHHHHHHH
Confidence            544432 45555   45556665543222       11111111111        1112222222222335677888888


Q ss_pred             HHcCCccc
Q psy9949         345 IERGQIKP  352 (383)
Q Consensus       345 ~~~g~l~~  352 (383)
                      +++|.+-.
T Consensus       162 i~~G~iG~  169 (350)
T 3rc1_A          162 LDEGVIGE  169 (350)
T ss_dssp             HHTTTTCS
T ss_pred             HhcCCCCC
Confidence            99987743

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=94.71  E-value=0.084  Score=49.17  Aligned_cols=36  Identities=25%  Similarity=0.261  Sum_probs=30.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      +.+.+|||+||+|-+|..++..+...|.+|+++++.
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~   44 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNL   44 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEec
Confidence            578899999999999999998888889999999854

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=94.69  E-value=0.023  Score=50.35  Aligned_cols=61  Identities=16%  Similarity=0.247  Sum_probs=43.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|.+|..+++.+...|.+|+++++..             .|..+.+....+.+..++|+||.+++..
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~D~~d~~~~~~~~~~~~~d~vi~~a~~~   67 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-------------LDITNISQVQQVVQEIRPHIIIHCAAYT   67 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-------------SCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-------------cCCCCHHHHHHHHHhcCCCEEEECCccc
Confidence            799999999999999998888899999998721             2233332222222222689999888754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=94.69  E-value=0.063  Score=47.94  Aligned_cols=72  Identities=15%  Similarity=0.239  Sum_probs=47.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchH---HHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAK---DLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~---~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~  263 (383)
                      +|||+||+|.+|..++..+...| .+|+++.+....   .......  ...|..+.+..+.+.+.   .++|+||.+++.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN--IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC--CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce--eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            48999999999999999888889 799999865432   2222222  12333333333344332   269999999885


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        79 ~   79 (310)
T 1eq2_A           79 S   79 (310)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=94.65  E-value=0.067  Score=47.24  Aligned_cols=67  Identities=10%  Similarity=0.086  Sum_probs=48.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|||+|+ |.+|..++..+...|.+|++++++. +.+.+...+...+ .|..+  +.     ..++|+||.+++..
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d--~~-----~~~~d~vi~~a~~~   74 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEE--PS-----LDGVTHLLISTAPD   74 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSC--CC-----CTTCCEEEECCCCB
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccc--cc-----cCCCCEEEECCCcc
Confidence            57999996 9999999999988899999999764 3344444444322 23322  11     45899999999854

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=94.65  E-value=0.12  Score=46.76  Aligned_cols=89  Identities=10%  Similarity=0.062  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++ ..+.+.+.++|+.. .  .  ++.+.+   ...|+|+-++.....
T Consensus       145 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~--~--~l~ell---~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          145 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATF-H--D--SLDSLL---SVSQFFSLNAPSTPE  215 (320)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEE-C--S--SHHHHH---HHCSEEEECCCCCTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEE-c--C--CHHHHH---hhCCEEEEeccCchH
Confidence            578999999 999999999999999999999987 65445555667632 1  1  222222   248999998875421


Q ss_pred             ----cccccccccccCCCceEEEec
Q psy9949         267 ----QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ----~~~~~~~~l~~~~~G~~v~~~  287 (383)
                          .....++.++  +++.++.++
T Consensus       216 t~~~i~~~~l~~mk--~gailIn~a  238 (320)
T 1gdh_A          216 TRYFFNKATIKSLP--QGAIVVNTA  238 (320)
T ss_dssp             TTTCBSHHHHTTSC--TTEEEEECS
T ss_pred             HHhhcCHHHHhhCC--CCcEEEECC
Confidence                1111156777  888888874

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=94.64  E-value=0.063  Score=44.85  Aligned_cols=72  Identities=26%  Similarity=0.443  Sum_probs=46.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCee--eeCCChHHHHHHh-cCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLV--IDYNEPEAMHSIA-GAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v--~~~~~~~~~~~i~-~~~g~d~v~d~~g~~  264 (383)
                      ++++|+||+|++|..+++.+...  +|++++++. +.+ ...+++. ..  .|..+.+....+. +.+++|++|.++|..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            36999999999999887776655  999888764 332 3333333 22  2444433222222 235899999999853

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.60  E-value=0.086  Score=44.20  Aligned_cols=71  Identities=15%  Similarity=0.085  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+.+|+|+||+|.+|..+++.+...|.  +|++++++...   ...+. .++.. +-.-.+.+.+.- +|+||.++|..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---~~~~~-~~~~~-D~~~~~~~~~~~-~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---EHPRL-DNPVG-PLAELLPQLDGS-IDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---CCTTE-ECCBS-CHHHHGGGCCSC-CSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---cCCCc-eEEec-cccCHHHHHHhh-hcEEEECeeec
Confidence            356899999999999999999999998  99999865432   11111 11111 111112233333 89999999864

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.59  E-value=0.1  Score=50.80  Aligned_cols=79  Identities=20%  Similarity=0.248  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEE-ecCc--------------h-HH---HHHhcCCCee---eeCCCh
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTT-CSGD--------------A-KD---LVTSLNPNLV---IDYNEP  242 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~-~~~~--------------~-~~---~~~~lg~~~v---~~~~~~  242 (383)
                      ++++.++||+||+|++|..+++.+...|++ ++.+ .++.              + .+   .+++.|..-.   .|..+.
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            467899999999999999998888878995 6666 5431              1 12   2334454321   344443


Q ss_pred             HHHHHHh-c---CCCccEEEEcCCCC
Q psy9949         243 EAMHSIA-G---AGPYDVILDAAGIP  264 (383)
Q Consensus       243 ~~~~~i~-~---~~g~d~v~d~~g~~  264 (383)
                      +-...+. .   .+++|.+|.++|..
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv~  353 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPTV  353 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCC
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcCC
Confidence            3333332 2   35799999999863

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=94.59  E-value=0.069  Score=47.81  Aligned_cols=73  Identities=22%  Similarity=0.211  Sum_probs=46.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|.+|..+++.+...|.+|+++++...  .+... -+...+ .|..+.+....+.+..++|+|+.+++..
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~   77 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA   77 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc
Confidence            6999999999999999988888999999886321  11111 122222 3444433222222223799999998753

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=94.57  E-value=0.049  Score=47.70  Aligned_cols=67  Identities=25%  Similarity=0.315  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|+|+||+|.+|..++..+. .|.+|++++++....    .+  ...|..+.+....+.+..++|+||.++|..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----~~--~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~   68 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ----GG--YKLDLTDFPRLEDFIIKKRPDVIINAAAMT   68 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT----TC--EECCTTSHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC----CC--ceeccCCHHHHHHHHHhcCCCEEEECCccc
Confidence            58999999999999988877 489999999765321    12  334555543333322222699999999864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=94.53  E-value=0.16  Score=47.12  Aligned_cols=33  Identities=36%  Similarity=0.343  Sum_probs=29.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLK-AWDIEVVTTCSG  222 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~-~~G~~Vi~~~~~  222 (383)
                      .+|||+||+|.+|..+++.+. ..|++|+++++.
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~   36 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSL   36 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecC
Confidence            479999999999999998888 899999999854

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=94.53  E-value=0.014  Score=50.68  Aligned_cols=75  Identities=23%  Similarity=0.284  Sum_probs=46.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKA-WDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAG  262 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~-~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g  262 (383)
                      .+++++||+||+|++|.++++.+.. .|++|+...+++.... .+.- ....|..+.+-.+.+.+   .+++|++|+++|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-~~~~-~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg   79 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-ENLK-FIKADLTKQQDITNVLDIIKNVSFDGIFLNAG   79 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-TTEE-EEECCTTCHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-ccce-EEecCcCCHHHHHHHHHHHHhCCCCEEEECCc
Confidence            3578999999999999988876665 6778888876543110 0110 01134444332222221   357999999998


Q ss_pred             C
Q psy9949         263 I  263 (383)
Q Consensus       263 ~  263 (383)
                      .
T Consensus        80 ~   80 (244)
T 4e4y_A           80 I   80 (244)
T ss_dssp             C
T ss_pred             c
Confidence            6

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=94.51  E-value=0.058  Score=49.01  Aligned_cols=72  Identities=25%  Similarity=0.227  Sum_probs=46.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch-HHHH-HhcCCCee-eeCCC-hHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA-KDLV-TSLNPNLV-IDYNE-PEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~-~~~~-~~lg~~~v-~~~~~-~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|.+|..+++.+... |.+|++++++.. .+.+ ...+...+ .|..+ ....+.+.  .++|+||.+++..
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~d~vih~A~~~   78 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV--KKCDVVLPLVAIA   78 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH--HHCSEEEECBCCC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhc--cCCCEEEEccccc
Confidence            6999999999999999988887 899999996543 2221 11122111 23333 22222221  2689999998753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=94.51  E-value=0.12  Score=47.51  Aligned_cols=74  Identities=16%  Similarity=0.162  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H--HHHHhc-CCCee-ee-CCChHHHHHHhcCCCccEEEEcCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K--DLVTSL-NPNLV-ID-YNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~--~~~~~l-g~~~v-~~-~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      +.+|+|+||+|.+|..+++.+...|.+|++++++.. .  +.+.+. +...+ .| ..+.+.....  ..++|+||.+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~--~~~~d~Vi~~a~   82 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTL--FEGAHLAFINTT   82 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHH--HTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHH--HhcCCEEEEcCC
Confidence            568999999999999999888888999999986542 2  222222 22211 24 4443322222  247999998776


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        83 ~~   84 (352)
T 1xgk_A           83 SQ   84 (352)
T ss_dssp             ST
T ss_pred             CC
Confidence            53

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=94.50  E-value=0.16  Score=51.22  Aligned_cols=77  Identities=18%  Similarity=0.215  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-----HHHHH---hcCCCee-eeCCChHHHHHHhcCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-----KDLVT---SLNPNLV-IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-----~~~~~---~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++...     .+.+.   ..+...+ .|..+.+....+.+..++|+||
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi   89 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   89 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence            4678999999999999999988888999999985421     11121   1233322 3444433333332223799999


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      .+++..
T Consensus        90 h~A~~~   95 (699)
T 1z45_A           90 HFAGLK   95 (699)
T ss_dssp             ECCSCC
T ss_pred             ECCccc
Confidence            999864

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=94.49  E-value=0.18  Score=46.60  Aligned_cols=79  Identities=20%  Similarity=0.254  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEecCc----h-------------HHHHHhcCCCee-e--eCCChHH-
Q psy9949         187 PRDKRVLVLGASGGVGTMA-VQLLKAWDIEVVTTCSGD----A-------------KDLVTSLNPNLV-I--DYNEPEA-  244 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~a-i~la~~~G~~Vi~~~~~~----~-------------~~~~~~lg~~~v-~--~~~~~~~-  244 (383)
                      ..++++||+|+++++|+++ +.+|...|+.++++...+    +             .+.+++.|.... +  |..++.. 
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            4678999999999999975 566657799888887332    1             123455565433 3  3333222 


Q ss_pred             ---HHHHh-cCCCccEEEEcCCCCc
Q psy9949         245 ---MHSIA-GAGPYDVILDAAGIPL  265 (383)
Q Consensus       245 ---~~~i~-~~~g~d~v~d~~g~~~  265 (383)
                         .+.+. +.+++|+++.+.+.+.
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~  152 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPV  152 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEeccccc
Confidence               23333 3478999999998764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=94.49  E-value=0.086  Score=47.71  Aligned_cols=73  Identities=18%  Similarity=0.209  Sum_probs=47.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc---hHHHHHhcC--CC-ee--eeCCChHHHHHHhcCCCccEEEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD---AKDLVTSLN--PN-LV--IDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~---~~~~~~~lg--~~-~v--~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      .+|||+||+|.+|..++..+...|  .+|+++++..   +.+.+.++.  .. .+  .|..+.+....+.  .++|+||.
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vih   81 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV--RKVDGVVH   81 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH--HTCSEEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh--hCCCEEEE
Confidence            479999999999999888777765  7999998642   222222221  11 12  2444433332322  57999999


Q ss_pred             cCCCC
Q psy9949         260 AAGIP  264 (383)
Q Consensus       260 ~~g~~  264 (383)
                      ++|..
T Consensus        82 ~A~~~   86 (336)
T 2hun_A           82 LAAES   86 (336)
T ss_dssp             CCCCC
T ss_pred             CCCCc
Confidence            99864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=94.45  E-value=0.056  Score=48.63  Aligned_cols=64  Identities=20%  Similarity=0.250  Sum_probs=44.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+..+            .|..+.+....+.+..++|+||.+++..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~------------~D~~d~~~~~~~~~~~~~d~vih~a~~~   66 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------LNLLDSRAVHDFFASERIDQVYLAAAKV   66 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc------------CCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence            358999999999999999988888999888775421            2333322222222212789999998754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=94.45  E-value=0.15  Score=46.12  Aligned_cols=74  Identities=23%  Similarity=0.240  Sum_probs=47.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-----hHHHHHhc-CC-Cee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-----AKDLVTSL-NP-NLV--IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-----~~~~~~~l-g~-~~v--~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|||+||+|.+|..+++.+...|.+|+++++..     ..+.+.++ +. ..+  .|..+.+....+.+..++|+||.++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A   81 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECC
Confidence            689999999999999998888999999987421     12222221 21 122  2444443333333223699999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        82 ~~~   84 (338)
T 1udb_A           82 GLK   84 (338)
T ss_dssp             SCC
T ss_pred             ccC
Confidence            853

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=94.44  E-value=0.15  Score=44.77  Aligned_cols=84  Identities=18%  Similarity=0.200  Sum_probs=56.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +++++|.| +|++|.+++..+...|.+|++..++. +. +++ +++.. +..+.+         ...+|+||+|++....
T Consensus       118 ~k~vlvlG-aGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~---------l~~~DiVInaTp~Gm~  185 (269)
T 3phh_A          118 YQNALILG-AGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPP---------KSAFDLIINATSASLH  185 (269)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCC---------SSCCSEEEECCTTCCC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHH---------hccCCEEEEcccCCCC
Confidence            78999999 79999999999998998888888664 33 455 77742 333322         1279999999875421


Q ss_pred             ccccc-cc----ccccCCCceEEEe
Q psy9949         267 QINSY-LP----FLKTGKFSKFVTL  286 (383)
Q Consensus       267 ~~~~~-~~----~l~~~~~G~~v~~  286 (383)
                      ....+ .+    .++  ++..++++
T Consensus       186 ~~~~l~~~~l~~~l~--~~~~v~D~  208 (269)
T 3phh_A          186 NELPLNKEVLKGYFK--EGKLAYDL  208 (269)
T ss_dssp             CSCSSCHHHHHHHHH--HCSEEEES
T ss_pred             CCCCCChHHHHhhCC--CCCEEEEe
Confidence            10000 12    456  66677776

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=94.43  E-value=0.11  Score=47.96  Aligned_cols=89  Identities=16%  Similarity=0.163  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .|.+|.|.| .|.+|..+++.++.+|++ |++.+++. ..+.+.++|+..+   .  ++.+-+   ...|+|+.++....
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~---~--~l~ell---~~aDvV~l~~P~t~  233 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV---E--NIEELV---AQADIVTVNAPLHA  233 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC---S--SHHHHH---HTCSEEEECCCCST
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec---C--CHHHHH---hcCCEEEECCCCCh
Confidence            678999999 999999999999999996 99988553 4555666774321   1  233322   25899999887642


Q ss_pred             ----ccccccccccccCCCceEEEec
Q psy9949         266 ----DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 ----~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                          ......++.++  +++.+|.++
T Consensus       234 ~t~~li~~~~l~~mk--~ga~lIn~a  257 (364)
T 2j6i_A          234 GTKGLINKELLSKFK--KGAWLVNTA  257 (364)
T ss_dssp             TTTTCBCHHHHTTSC--TTEEEEECS
T ss_pred             HHHHHhCHHHHhhCC--CCCEEEECC
Confidence                11111256778  888888875

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=94.43  E-value=0.19  Score=46.26  Aligned_cols=137  Identities=16%  Similarity=0.156  Sum_probs=78.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc--hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD--AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      -+|.|.| .|.+|...+..++.. +++++++++..  +.+.+++.|+. +  +.  ++. .+.+...+|+|+.|+....-
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~-~--~~--~~~-~ll~~~~~D~V~i~tp~~~h   78 (359)
T 3e18_A            6 YQLVIVG-YGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLK-I--YE--SYE-AVLADEKVDAVLIATPNDSH   78 (359)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCC-B--CS--CHH-HHHHCTTCCEEEECSCGGGH
T ss_pred             CcEEEEC-cCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCc-e--eC--CHH-HHhcCCCCCEEEEcCCcHHH
Confidence            4799999 899998877777766 67998887443  34555667763 2  22  233 33334579999999987654


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE  346 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (383)
                      ...+ ..++.  . |+-|.+..|...+       ......-......        .|..+..++.......+..+.++++
T Consensus        79 ~~~~-~~al~--a-GkhVl~EKP~a~~-------~~ea~~l~~~a~~--------~g~~~~v~~~~r~~p~~~~~k~~i~  139 (359)
T 3e18_A           79 KELA-ISALE--A-GKHVVCEKPVTMT-------SEDLLAIMDVAKR--------VNKHFMVHQNRRWDEDFLIIKEMFE  139 (359)
T ss_dssp             HHHH-HHHHH--T-TCEEEEESSCCSS-------HHHHHHHHHHHHH--------HTCCEEEECGGGGCHHHHHHHHHHH
T ss_pred             HHHH-HHHHH--C-CCCEEeeCCCcCC-------HHHHHHHHHHHHH--------hCCeEEEEeeeccCHHHHHHHHHHH
Confidence            3332 55565  4 5556665543222       1111111111111        1122222222234567888889999


Q ss_pred             cCCccc
Q psy9949         347 RGQIKP  352 (383)
Q Consensus       347 ~g~l~~  352 (383)
                      +|.+-.
T Consensus       140 ~g~iG~  145 (359)
T 3e18_A          140 QKTIGE  145 (359)
T ss_dssp             HTTTSS
T ss_pred             cCCCCC
Confidence            988744

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=94.34  E-value=0.11  Score=47.20  Aligned_cols=73  Identities=21%  Similarity=0.238  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc---hHHHHHhcCCC--ee--eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD---AKDLVTSLNPN--LV--IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~---~~~~~~~lg~~--~v--~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+|||+||+|.+|..+++.+...  |.+|+++++..   ..+.+.++...  .+  .|..+......+.  .++|+||.+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vih~   82 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLA--AKADAIVHY   82 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH--TTCSEEEEC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHh--hcCCEEEEC
Confidence            57999999999999998887776  78999998643   12222333111  12  2444433222222  467999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      ++..
T Consensus        83 A~~~   86 (348)
T 1oc2_A           83 AAES   86 (348)
T ss_dssp             CSCC
T ss_pred             Cccc
Confidence            9864

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=94.32  E-value=0.24  Score=45.21  Aligned_cols=138  Identities=10%  Similarity=0.146  Sum_probs=81.1

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHC-CCEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTM-AVQLLKAW-DIEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~-ai~la~~~-G~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      =++.|.| +|.+|.. .+...+.. +++++++++.+  + .++++++|...++.    ++. .+.+...+|+|+-|+...
T Consensus        24 irigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~----d~~-ell~~~~iDaV~I~tP~~   97 (350)
T 4had_A           24 LRFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG----SYE-EMLASDVIDAVYIPLPTS   97 (350)
T ss_dssp             EEEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES----SHH-HHHHCSSCSEEEECSCGG
T ss_pred             cEEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC----CHH-HHhcCCCCCEEEEeCCCc
Confidence            3799999 8999974 35555544 77999998543  2 35678889876542    223 333446799999999876


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKF  344 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  344 (383)
                      .-...+ ..++.   .|+=|.+..|...+...       ...-......        .+..+..++.......+..+.++
T Consensus        98 ~H~~~~-~~al~---aGkhVl~EKPla~~~~e-------a~~l~~~a~~--------~~~~l~v~~~~R~~p~~~~~k~~  158 (350)
T 4had_A           98 QHIEWS-IKAAD---AGKHVVCEKPLALKAGD-------IDAVIAARDR--------NKVVVTEAYMITYSPVWQKVRSL  158 (350)
T ss_dssp             GHHHHH-HHHHH---TTCEEEECSCCCSSGGG-------GHHHHHHHHH--------HTCCEEECCGGGGSHHHHHHHHH
T ss_pred             hhHHHH-HHHHh---cCCEEEEeCCcccchhh-------HHHHHHHHHH--------cCCceeEeeeeecCHHHHHhhHh
Confidence            543332 55565   46778887765444221       1111111111        11111112222335678888999


Q ss_pred             HHcCCccc
Q psy9949         345 IERGQIKP  352 (383)
Q Consensus       345 ~~~g~l~~  352 (383)
                      +++|.|-.
T Consensus       159 i~~G~iG~  166 (350)
T 4had_A          159 IDEGAIGS  166 (350)
T ss_dssp             HHTTTTSS
T ss_pred             hhcCCCCc
Confidence            99998743

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=94.31  E-value=0.081  Score=47.32  Aligned_cols=69  Identities=22%  Similarity=0.215  Sum_probs=44.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|||+||+|.+|..+++.+...|.+|+++++... .......+...+ .|..+..+.+.   ..+ |+||.+++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~~-d~vih~A~~   72 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAG---IKG-DVVFHFAAN   72 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTT---CCC-SEEEECCSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhh---cCC-CEEEECCCC
Confidence            6999999999999999999999999999986432 211112222211 23333321111   124 999999985

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=94.29  E-value=0.32  Score=37.38  Aligned_cols=73  Identities=12%  Similarity=0.174  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHH-hcCCCeee-eCCChHHHHHHhc--CCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVT-SLNPNLVI-DYNEPEAMHSIAG--AGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~-~lg~~~v~-~~~~~~~~~~i~~--~~g~d~v~d~~g~  263 (383)
                      +.+|+|.| +|.+|..+++.+...|.+|+++++++ +.+.+. +++...+. +..+..   .+.+  ..++|+|+.+++.
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~---~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIK---TLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHH---HHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHH---HHHHcCcccCCEEEEeeCC
Confidence            46799998 69999999999988899999988654 334333 45643221 222222   2222  3579999999887


Q ss_pred             Cc
Q psy9949         264 PL  265 (383)
Q Consensus       264 ~~  265 (383)
                      ..
T Consensus        80 ~~   81 (140)
T 1lss_A           80 EE   81 (140)
T ss_dssp             HH
T ss_pred             ch
Confidence            54

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=94.26  E-value=0.36  Score=44.18  Aligned_cols=138  Identities=10%  Similarity=0.055  Sum_probs=78.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc--hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD--AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~--~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .-+|.|.| .|.+|...+..++.. +++++++++..  +. ++++++|...   +.  ++. .+.+...+|+|+.|+...
T Consensus         5 ~~~vgiiG-~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~--~~~-~~l~~~~~D~V~i~tp~~   77 (354)
T 3db2_A            5 PVGVAAIG-LGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DA--TME-ALLAREDVEMVIITVPND   77 (354)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CS--SHH-HHHHCSSCCEEEECSCTT
T ss_pred             cceEEEEc-cCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cC--CHH-HHhcCCCCCEEEEeCChH
Confidence            35799999 899998877777665 67888887443  22 4556677643   22  233 333345799999999886


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKF  344 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  344 (383)
                      .-.... ..++.  . |+-|.+..|...+       ......-.....        -.+..+..++.......+..+.++
T Consensus        78 ~h~~~~-~~al~--~-gk~vl~EKP~~~~-------~~~~~~l~~~a~--------~~~~~~~v~~~~R~~p~~~~~k~~  138 (354)
T 3db2_A           78 KHAEVI-EQCAR--S-GKHIYVEKPISVS-------LDHAQRIDQVIK--------ETGVKFLCGHSSRRLGALRKMKEM  138 (354)
T ss_dssp             SHHHHH-HHHHH--T-TCEEEEESSSCSS-------HHHHHHHHHHHH--------HHCCCEEEECGGGGSHHHHHHHHH
T ss_pred             HHHHHH-HHHHH--c-CCEEEEccCCCCC-------HHHHHHHHHHHH--------HcCCeEEEeechhcCHHHHHHHHH
Confidence            544432 55555  4 4556665443221       111111111111        111222222323346678889999


Q ss_pred             HHcCCccc
Q psy9949         345 IERGQIKP  352 (383)
Q Consensus       345 ~~~g~l~~  352 (383)
                      +++|.+-.
T Consensus       139 i~~g~iG~  146 (354)
T 3db2_A          139 IDTKEIGE  146 (354)
T ss_dssp             HHTTTTCC
T ss_pred             HhcCCCCC
Confidence            99998744

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=94.26  E-value=0.1  Score=47.47  Aligned_cols=88  Identities=17%  Similarity=0.146  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-  265 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++.. +.+...++|+..    .  ++.+-+.   ..|+|+-++.... 
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~--~l~ell~---~aDvV~l~~P~t~~  213 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ----V--ACSELFA---SSDFILLALPLNAD  213 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE----C--CHHHHHH---HCSEEEECCCCSTT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee----C--CHHHHHh---hCCEEEEcCCCCHH
Confidence            478999999 99999999999999999999998654 455555666421    1  1232222   3789988876432 


Q ss_pred             ---ccccccccccccCCCceEEEec
Q psy9949         266 ---DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 ---~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                         ......++.++  +++.+|.++
T Consensus       214 t~~li~~~~l~~mk--~gailIN~a  236 (330)
T 4e5n_A          214 TLHLVNAELLALVR--PGALLVNPC  236 (330)
T ss_dssp             TTTCBCHHHHTTSC--TTEEEEECS
T ss_pred             HHHHhCHHHHhhCC--CCcEEEECC
Confidence               11112266777  888888874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=94.26  E-value=0.082  Score=47.46  Aligned_cols=33  Identities=30%  Similarity=0.320  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      +++|||+||+|.+|..++..+...|.+|+++++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r   33 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR   33 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe
Confidence            468999999999999999988889999998886

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=94.25  E-value=0.054  Score=48.61  Aligned_cols=69  Identities=23%  Similarity=0.323  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|.+|..++..+...  |.+|+++++.. ..+     +...+ .|..+.+....+.+..++|+||.+++..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   73 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL   73 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCccc
Confidence            4899999999999988877766  77999988543 211     22222 3444443333333224799999999853

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=94.22  E-value=0.066  Score=47.56  Aligned_cols=64  Identities=20%  Similarity=0.240  Sum_probs=43.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|+|+||+|.+|..+++.+. .|.+|++++++..         ....|..+.+....+.+..++|+||.+++..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   65 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHT   65 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------cccccCCCHHHHHHHHHhcCCCEEEECcccC
Confidence            69999999999999998888 7999999987641         0112334433222222222589999998753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=94.22  E-value=0.04  Score=51.99  Aligned_cols=37  Identities=19%  Similarity=0.299  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      .++.+|||+||+|.+|..++..+...|++|++++++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~  103 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRAD  103 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCC
Confidence            3567999999999999999888877788999999654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=94.21  E-value=0.11  Score=47.11  Aligned_cols=35  Identities=31%  Similarity=0.314  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      ++++|||+||+|.+|..++..+...|.+|++++++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~   38 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRD   38 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence            46789999999999999999888899999998865

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=94.19  E-value=0.059  Score=46.77  Aligned_cols=98  Identities=16%  Similarity=0.089  Sum_probs=61.7

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecC-chHHHHH----hcCCCe-eeeCCChHHHHHHhc
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSG-DAKDLVT----SLNPNL-VIDYNEPEAMHSIAG  250 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~-~~~~~~~----~lg~~~-v~~~~~~~~~~~i~~  250 (383)
                      ...+    +++++||-.| +|. |..+..+++..  +.+|++++.+ +..+.++    ..|... + .....++.+. ..
T Consensus        88 ~~~~----~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~~-~~  159 (255)
T 3mb5_A           88 YAGI----SPGDFIVEAG-VGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRV-TIKLKDIYEG-IE  159 (255)
T ss_dssp             HTTC----CTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTE-EEECSCGGGC-CC
T ss_pred             hhCC----CCCCEEEEec-CCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCce-EEEECchhhc-cC
Confidence            4556    8899999998 554 88999999985  4699999955 4344433    345432 2 1111112211 12


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...+|+|+.....+......+.++++  ++|+++..
T Consensus       160 ~~~~D~v~~~~~~~~~~l~~~~~~L~--~gG~l~~~  193 (255)
T 3mb5_A          160 EENVDHVILDLPQPERVVEHAAKALK--PGGFFVAY  193 (255)
T ss_dssp             CCSEEEEEECSSCGGGGHHHHHHHEE--EEEEEEEE
T ss_pred             CCCcCEEEECCCCHHHHHHHHHHHcC--CCCEEEEE
Confidence            24699999877665433333367889  99999876

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=94.16  E-value=0.068  Score=47.93  Aligned_cols=36  Identities=25%  Similarity=0.240  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      .+.+|||+||+|.+|..++..+...|.+|+++++..
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   41 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLR   41 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence            357899999999999999999998999999999654

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=94.12  E-value=0.11  Score=42.16  Aligned_cols=92  Identities=14%  Similarity=0.190  Sum_probs=58.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc-hHHHHH----hcCCC-ee-eeCCChHHHHHHhcC-CCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD-AKDLVT----SLNPN-LV-IDYNEPEAMHSIAGA-GPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~-~~~~~~----~lg~~-~v-~~~~~~~~~~~i~~~-~g~d~v  257 (383)
                      +++++||-.| +| .|..+..+++.. +.+|++++.++ ..+.++    +.+.. .+ +..+.   .+.+... ..+|+|
T Consensus        24 ~~~~~vldiG-~G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~D~i   98 (178)
T 3hm2_A           24 KPHETLWDIG-GG-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGA---PRAFDDVPDNPDVI   98 (178)
T ss_dssp             CTTEEEEEES-TT-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCT---TGGGGGCCSCCSEE
T ss_pred             cCCCeEEEeC-CC-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecch---HhhhhccCCCCCEE
Confidence            7889999998 55 499999999987 55999999554 344443    44544 33 22221   1222233 579999


Q ss_pred             EEcCCCCc--ccccccccccccCCCceEEEe
Q psy9949         258 LDAAGIPL--DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       258 ~d~~g~~~--~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +.......  .... +.+.++  ++|+++..
T Consensus        99 ~~~~~~~~~~~l~~-~~~~L~--~gG~l~~~  126 (178)
T 3hm2_A           99 FIGGGLTAPGVFAA-AWKRLP--VGGRLVAN  126 (178)
T ss_dssp             EECC-TTCTTHHHH-HHHTCC--TTCEEEEE
T ss_pred             EECCcccHHHHHHH-HHHhcC--CCCEEEEE
Confidence            97654433  2222 267888  99999875

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=94.11  E-value=0.57  Score=42.32  Aligned_cols=135  Identities=16%  Similarity=0.182  Sum_probs=76.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +|.|.| +|.+|...+..++.. +++++++++..  + .++++++|..    +.+  +.+ +.+...+|+|+.|+.....
T Consensus         5 ~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~--~~~-~l~~~~~D~V~i~tp~~~h   76 (331)
T 4hkt_A            5 RFGLLG-AGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VRT--IDA-IEAAADIDAVVICTPTDTH   76 (331)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----ECC--HHH-HHHCTTCCEEEECSCGGGH
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cCC--HHH-HhcCCCCCEEEEeCCchhH
Confidence            689999 899999877777665 67888877443  2 2455667764    222  232 3333579999999987654


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE  346 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (383)
                      .... ..++.  . |+-|.+..|...+       ......-....        .-.|..+..++.......+..+.++++
T Consensus        77 ~~~~-~~al~--~-gk~v~~EKP~~~~-------~~~~~~l~~~a--------~~~g~~~~v~~~~r~~p~~~~~~~~i~  137 (331)
T 4hkt_A           77 ADLI-ERFAR--A-GKAIFCEKPIDLD-------AERVRACLKVV--------SDTKAKLMVGFNRRFDPHFMAVRKAID  137 (331)
T ss_dssp             HHHH-HHHHH--T-TCEEEECSCSCSS-------HHHHHHHHHHH--------HHTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred             HHHH-HHHHH--c-CCcEEEecCCCCC-------HHHHHHHHHHH--------HHcCCeEEEcccccCCHHHHHHHHHHH
Confidence            4432 55555  4 4556665443221       11111111111        111222222222234567888889999


Q ss_pred             cCCccc
Q psy9949         347 RGQIKP  352 (383)
Q Consensus       347 ~g~l~~  352 (383)
                      +|.+-.
T Consensus       138 ~g~iG~  143 (331)
T 4hkt_A          138 DGRIGE  143 (331)
T ss_dssp             TTTTCS
T ss_pred             cCCCCc
Confidence            988743

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=94.10  E-value=0.052  Score=49.34  Aligned_cols=75  Identities=19%  Similarity=0.179  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEecCchHHHHHhcCCC-ee--eeCCChHHHHHHhcCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWD-------IEVVTTCSGDAKDLVTSLNPN-LV--IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G-------~~Vi~~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      .+.+|||+||+|.+|..++..+...|       .+|+++++...... ...+.. ..  .|..+.+....+.+ .++|+|
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~v   90 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-AGFSGAVDARAADLSAPGEAEKLVE-ARPDVI   90 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC-TTCCSEEEEEECCTTSTTHHHHHHH-TCCSEE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc-cccCCceeEEEcCCCCHHHHHHHHh-cCCCEE
Confidence            46789999999999999998888888       79999986532110 001111 11  23333322222221 479999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      |.+++..
T Consensus        91 ih~A~~~   97 (342)
T 2hrz_A           91 FHLAAIV   97 (342)
T ss_dssp             EECCCCC
T ss_pred             EECCccC
Confidence            9999854

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=94.08  E-value=0.052  Score=47.11  Aligned_cols=97  Identities=18%  Similarity=0.054  Sum_probs=61.1

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecC-chHHHHHh----c-CCCee--eeCCChHHHHHH
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSG-DAKDLVTS----L-NPNLV--IDYNEPEAMHSI  248 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~-~~~~~~~~----l-g~~~v--~~~~~~~~~~~i  248 (383)
                      ...+    +++++||-.| +| .|..+..+++..  +.+|++++.+ +..+.+++    . |.+.+  ...+   +.+.-
T Consensus        91 ~~~~----~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d---~~~~~  161 (258)
T 2pwy_A           91 LLDL----APGMRVLEAG-TG-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGK---LEEAE  161 (258)
T ss_dssp             HTTC----CTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESC---GGGCC
T ss_pred             HcCC----CCCCEEEEEC-CC-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECc---hhhcC
Confidence            4456    8899999998 55 489999999985  4699999954 44444432    2 53333  2222   11110


Q ss_pred             hcCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         249 AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       249 ~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...+.+|+|+............+.++++  ++|+++.+
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~--~gG~l~~~  197 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALK--PDRFLVAY  197 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEE--EEEEEEEE
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCC--CCCEEEEE
Confidence            1124699999876655332222367888  99999886

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=94.05  E-value=0.19  Score=45.37  Aligned_cols=72  Identities=25%  Similarity=0.250  Sum_probs=46.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC---C---CEEEEEecCc---hHHHHHhcC--CC-ee--eeCCChHHHHHHhcCCCccE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW---D---IEVVTTCSGD---AKDLVTSLN--PN-LV--IDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~---G---~~Vi~~~~~~---~~~~~~~lg--~~-~v--~~~~~~~~~~~i~~~~g~d~  256 (383)
                      +|||+||+|.+|..+++.+...   |   .+|+++++..   +.+.+..+.  .. .+  .|..+.+....+  ..++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~   79 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARE--LRGVDA   79 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHH--TTTCCE
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHH--hcCCCE
Confidence            6999999999999998888775   7   8999998643   222222221  11 12  244443322222  268999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      ||.+++..
T Consensus        80 Vih~A~~~   87 (337)
T 1r6d_A           80 IVHFAAES   87 (337)
T ss_dssp             EEECCSCC
T ss_pred             EEECCCcc
Confidence            99999854

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=94.04  E-value=0.28  Score=44.04  Aligned_cols=93  Identities=16%  Similarity=0.211  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC---ch-H-HHHHhc----CCC-eeeeCCChHH-HHHHhcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG---DA-K-DLVTSL----NPN-LVIDYNEPEA-MHSIAGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~---~~-~-~~~~~l----g~~-~v~~~~~~~~-~~~i~~~~g~d  255 (383)
                      .+++++|+| +|++|.+++..+...|+ +|+++.++   .. . ++++++    +.. .+.+..+.+. .+.+   ..+|
T Consensus       147 ~gk~~lVlG-AGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l---~~~D  222 (312)
T 3t4e_A          147 RGKTMVLLG-AGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEAL---ASAD  222 (312)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH---HHCS
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhc---cCce
Confidence            678999999 79999999999999999 88888876   21 1 233333    221 2334443211 2222   2589


Q ss_pred             EEEEcCCCCcc--ccccc---ccccccCCCceEEEe
Q psy9949         256 VILDAAGIPLD--QINSY---LPFLKTGKFSKFVTL  286 (383)
Q Consensus       256 ~v~d~~g~~~~--~~~~~---~~~l~~~~~G~~v~~  286 (383)
                      +||+|++....  ....+   ...+.  ++..++++
T Consensus       223 iIINaTp~Gm~~~~~~~~~~~~~~l~--~~~~v~D~  256 (312)
T 3t4e_A          223 ILTNGTKVGMKPLENESLIGDVSLLR--PELLVTEC  256 (312)
T ss_dssp             EEEECSSTTSTTSTTCCSCCCGGGSC--TTCEEEEC
T ss_pred             EEEECCcCCCCCCCCCcccCCHHHcC--CCCEEEEe
Confidence            99999875421  11100   24555  66666665

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=94.04  E-value=0.52  Score=43.50  Aligned_cols=138  Identities=12%  Similarity=0.088  Sum_probs=79.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH--------CCCEEEEEecC--ch-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKA--------WDIEVVTTCSG--DA-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~--------~G~~Vi~~~~~--~~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      =+|.|.| +|.+|..-+...+.        -+++++++++.  ++ .++++++|...++  .+  +. .+.+...+|+|+
T Consensus        26 irvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y--~d--~~-ell~~~~iDaV~   99 (393)
T 4fb5_A           26 LGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT--AD--WR-ALIADPEVDVVS   99 (393)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE--SC--HH-HHHHCTTCCEEE
T ss_pred             ccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec--CC--HH-HHhcCCCCcEEE
Confidence            4799999 89999754332221        25689999843  33 3567888987654  22  33 333446799999


Q ss_pred             EcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHH
Q psy9949         259 DAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAV  338 (383)
Q Consensus       259 d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (383)
                      -|+....-...+ ..++.   .|+=|.+..|...+.       .....-+....        -.+..+..++.......+
T Consensus       100 IatP~~~H~~~a-~~al~---aGkhVl~EKPla~~~-------~ea~~l~~~a~--------~~g~~l~vg~~~R~~p~~  160 (393)
T 4fb5_A          100 VTTPNQFHAEMA-IAALE---AGKHVWCEKPMAPAY-------ADAERMLATAE--------RSGKVAALGYNYIQNPVM  160 (393)
T ss_dssp             ECSCGGGHHHHH-HHHHH---TTCEEEECSCSCSSH-------HHHHHHHHHHH--------HSSSCEEECCGGGGCHHH
T ss_pred             ECCChHHHHHHH-HHHHh---cCCeEEEccCCcccH-------HHHHHhhhhHH--------hcCCccccccccccChHH
Confidence            999876543332 55555   467778876643331       11111111111        112222222223345678


Q ss_pred             HHHHHHHHcCCccc
Q psy9949         339 KEINKFIERGQIKP  352 (383)
Q Consensus       339 ~~~~~l~~~g~l~~  352 (383)
                      ..+.+++++|.+-.
T Consensus       161 ~~~k~~i~~G~iG~  174 (393)
T 4fb5_A          161 RHIRKLVGDGVIGR  174 (393)
T ss_dssp             HHHHHHHHTTTTCS
T ss_pred             HHHHHHHHcCCCcc
Confidence            88889999988754

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=94.00  E-value=0.36  Score=44.31  Aligned_cols=138  Identities=14%  Similarity=0.171  Sum_probs=77.8

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHC-CCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         190 KRVLVLGASGGVGTM-AVQLLKAW-DIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~-ai~la~~~-G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      -+|.|.| .|.+|.. .+..++.. +++++++++.......++++...++  .+  +. .+.+...+|+|+.|+....-.
T Consensus         6 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~--~~-~ll~~~~vD~V~i~tp~~~H~   79 (358)
T 3gdo_A            6 IKVGILG-YGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVV--HE--LE-EITNDPAIELVIVTTPSGLHY   79 (358)
T ss_dssp             EEEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEE--SS--TH-HHHTCTTCCEEEECSCTTTHH
T ss_pred             ceEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceE--CC--HH-HHhcCCCCCEEEEcCCcHHHH
Confidence            4799999 8999974 56655544 6799999866554455666543443  21  22 333345799999999876543


Q ss_pred             ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER  347 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (383)
                      ... ..+++   .|+-|.+..|...+       ......-......        .|..+..++.......+..+.+++++
T Consensus        80 ~~~-~~al~---aGkhVl~EKPla~~-------~~e~~~l~~~a~~--------~g~~~~v~~~~r~~p~~~~~k~~i~~  140 (358)
T 3gdo_A           80 EHT-MACIQ---AGKHVVMEKPMTAT-------AEEGETLKRAADE--------KGVLLSVYHNRRWDNDFLTIKKLISE  140 (358)
T ss_dssp             HHH-HHHHH---TTCEEEEESSCCSS-------HHHHHHHHHHHHH--------HTCCEEEECGGGGSHHHHHHHHHHHT
T ss_pred             HHH-HHHHH---cCCeEEEecCCcCC-------HHHHHHHHHHHHH--------cCCeEEEeeecccCHHHHHHHHHHhc
Confidence            332 55555   45666666554322       1111111111111        11222222222235678888999999


Q ss_pred             CCccc
Q psy9949         348 GQIKP  352 (383)
Q Consensus       348 g~l~~  352 (383)
                      |.+-.
T Consensus       141 g~iG~  145 (358)
T 3gdo_A          141 GSLED  145 (358)
T ss_dssp             TSSCS
T ss_pred             CCCCc
Confidence            88744

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.98  E-value=0.17  Score=46.40  Aligned_cols=89  Identities=19%  Similarity=0.194  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-  265 (383)
                      .|.+|.|.| .|.+|..+++.++.+|++|++.++.. ..+.+.++|+..+     .++.+-+   ...|+|+-++.... 
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell---~~aDvV~l~~Plt~~  233 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----EDLNEML---PKCDVIVINMPLTEK  233 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SCHHHHG---GGCSEEEECSCCCTT
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CCHHHHH---hcCCEEEECCCCCHH
Confidence            578999999 99999999999999999999988653 4555666675322     1222222   24899998876431 


Q ss_pred             c---cccccccccccCCCceEEEec
Q psy9949         266 D---QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 ~---~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      .   .....++.|+  +++.+|.++
T Consensus       234 t~~li~~~~l~~mk--~gailIN~a  256 (351)
T 3jtm_A          234 TRGMFNKELIGKLK--KGVLIVNNA  256 (351)
T ss_dssp             TTTCBSHHHHHHSC--TTEEEEECS
T ss_pred             HHHhhcHHHHhcCC--CCCEEEECc
Confidence            1   1111256677  888888774

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=93.97  E-value=0.048  Score=47.81  Aligned_cols=91  Identities=14%  Similarity=0.043  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chHHHHHhcCCC-eeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAKDLVTSLNPN-LVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~~~~~~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .++.+||..| +|. |..+..+++.. |.+|++++.+ +..+.+++.+.. .+...+..++.   ...+.+|+|+.....
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~~  158 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP---FSDTSMDAIIRIYAP  158 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS---BCTTCEEEEEEESCC
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC---CCCCceeEEEEeCCh
Confidence            4678999999 676 99999999986 6799999955 445666654432 22222211110   112469999964433


Q ss_pred             CcccccccccccccCCCceEEEe
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ......  .+.++  ++|+++..
T Consensus       159 ~~l~~~--~~~L~--pgG~l~~~  177 (269)
T 1p91_A          159 CKAEEL--ARVVK--PGGWVITA  177 (269)
T ss_dssp             CCHHHH--HHHEE--EEEEEEEE
T ss_pred             hhHHHH--HHhcC--CCcEEEEE
Confidence            222332  78899  99999876

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=93.93  E-value=0.058  Score=48.77  Aligned_cols=98  Identities=20%  Similarity=0.232  Sum_probs=61.5

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc-hHHHH----HhcCCCee--eeCCChHHHHHHh
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD-AKDLV----TSLNPNLV--IDYNEPEAMHSIA  249 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~-~~~~~----~~lg~~~v--~~~~~~~~~~~i~  249 (383)
                      ...+    +++++||-.| +|. |..++.+++..+  .+|++++.++ ..+.+    +..|..++  ...+   ..+.+.
T Consensus        70 ~l~~----~~~~~VLDiG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d---~~~~~~  140 (317)
T 1dl5_A           70 WVGL----DKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD---GYYGVP  140 (317)
T ss_dssp             HTTC----CTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC---GGGCCG
T ss_pred             hcCC----CCcCEEEEec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC---hhhccc
Confidence            4456    8899999999 555 888888888653  4799999554 33433    33454432  2222   111111


Q ss_pred             cCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..+.+|+|+....-...... +.+.|+  ++|+++..-.
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~-~~~~Lk--pgG~lvi~~~  176 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPET-WFTQLK--EGGRVIVPIN  176 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHH-HHHHEE--EEEEEEEEBC
T ss_pred             cCCCeEEEEEcCCHHHHHHH-HHHhcC--CCcEEEEEEC
Confidence            23579999987665544333 267889  9999887543

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=93.91  E-value=0.18  Score=46.46  Aligned_cols=88  Identities=10%  Similarity=0.117  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL--  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~--  265 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++..+.+.+.+.|+..    .  ++.+-+   ...|+|+-++....  
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~----~--~l~ell---~~aDvV~l~~Plt~~T  244 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEP----A--SLEDVL---TKSDFIFVVAAVTSEN  244 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEE----C--CHHHHH---HSCSEEEECSCSSCC-
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeee----C--CHHHHH---hcCCEEEEcCcCCHHH
Confidence            478999999 99999999999999999999998665555555666531    1  233322   25789888766432  


Q ss_pred             --ccccccccccccCCCceEEEec
Q psy9949         266 --DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 --~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                        ......++.++  +++.+|.++
T Consensus       245 ~~li~~~~l~~mk--~gailIN~a  266 (365)
T 4hy3_A          245 KRFLGAEAFSSMR--RGAAFILLS  266 (365)
T ss_dssp             --CCCHHHHHTSC--TTCEEEECS
T ss_pred             HhhcCHHHHhcCC--CCcEEEECc
Confidence              11111266778  888888875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=93.85  E-value=0.14  Score=46.39  Aligned_cols=34  Identities=32%  Similarity=0.363  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      +++|||+||+|.+|..++..+...|.+|++++++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~   42 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRD   42 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence            5789999999999999999888899999988754

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=93.83  E-value=0.16  Score=43.19  Aligned_cols=88  Identities=13%  Similarity=0.038  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+++|||.| +|.+|...+..+...|++|++++...  +. +++.+.+.. .+. ..  +.+  .+..++|+||-+++.+
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~-~i~-~~--~~~--~dL~~adLVIaAT~d~  102 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLR-VKR-KK--VGE--EDLLNVFFIVVATNDQ  102 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCE-EEC-SC--CCG--GGSSSCSEEEECCCCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcE-EEE-CC--CCH--hHhCCCCEEEECCCCH
Confidence            678999999 89999999999999999999988543  22 233332232 221 11  111  1235799999999887


Q ss_pred             cccccccccccccCCCceEEEe
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .....  +...+  +.|..|.+
T Consensus       103 ~~N~~--I~~~a--k~gi~VNv  120 (223)
T 3dfz_A          103 AVNKF--VKQHI--KNDQLVNM  120 (223)
T ss_dssp             HHHHH--HHHHS--CTTCEEEC
T ss_pred             HHHHH--HHHHH--hCCCEEEE
Confidence            65444  44445  46666654

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=93.80  E-value=0.66  Score=42.33  Aligned_cols=139  Identities=13%  Similarity=0.076  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCchHHHH-HHHHHHHC-CCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         189 DKRVLVLGASGGVGTM-AVQLLKAW-DIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~-ai~la~~~-G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .-+|.|.| .|.+|.. .+..++.. +++++++++.......+.++...++  .  ++. .+.+...+|+|+.|+....-
T Consensus         7 ~~rvgiiG-~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~--~~~-~ll~~~~vD~V~i~tp~~~H   80 (352)
T 3kux_A            7 KIKVGLLG-YGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVV--S--DPQ-MLFNDPSIDLIVIPTPNDTH   80 (352)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEE--S--CHH-HHHHCSSCCEEEECSCTTTH
T ss_pred             CceEEEEC-CCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceE--C--CHH-HHhcCCCCCEEEEeCChHHH
Confidence            35799999 8999985 66666655 6799988865433322344332232  2  223 33344579999999976654


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE  346 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (383)
                      .... ..+++   .|+-|.+..|...+       ......-.....        -.|..+..++.......+..+.++++
T Consensus        81 ~~~~-~~al~---aGkhV~~EKPla~~-------~~e~~~l~~~a~--------~~g~~~~v~~~~r~~p~~~~~~~~i~  141 (352)
T 3kux_A           81 FPLA-QSALA---AGKHVVVDKPFTVT-------LSQANALKEHAD--------DAGLLLSVFHNRRWDSDFLTLKTLLA  141 (352)
T ss_dssp             HHHH-HHHHH---TTCEEEECSSCCSC-------HHHHHHHHHHHH--------HTTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred             HHHH-HHHHH---CCCcEEEECCCcCC-------HHHHHHHHHHHH--------HcCCeEEEEeecccCHHHHHHHHHHh
Confidence            3332 55665   45666665543222       111111111111        11222211222223466788888999


Q ss_pred             cCCccc
Q psy9949         347 RGQIKP  352 (383)
Q Consensus       347 ~g~l~~  352 (383)
                      +|.+-.
T Consensus       142 ~g~iG~  147 (352)
T 3kux_A          142 EGSLGN  147 (352)
T ss_dssp             HTTTCS
T ss_pred             cCCCCc
Confidence            888744

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=93.77  E-value=0.3  Score=44.93  Aligned_cols=138  Identities=9%  Similarity=0.020  Sum_probs=76.8

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHC-CCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         190 KRVLVLGASGGVGTM-AVQLLKAW-DIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~-ai~la~~~-G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      -+|.|.| +|.+|.. .+..++.. +++++++++......+++++...++  .+  + +.+.+...+|+|+.|+....-.
T Consensus         6 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~--~-~~ll~~~~vD~V~i~tp~~~H~   79 (362)
T 3fhl_A            6 IKTGLAA-FGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIV--RS--F-KELTEDPEIDLIVVNTPDNTHY   79 (362)
T ss_dssp             EEEEESC-CSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEE--SC--S-HHHHTCTTCCEEEECSCGGGHH
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceE--CC--H-HHHhcCCCCCEEEEeCChHHHH
Confidence            4789999 8999985 56655554 7799998854433344556433333  21  2 2333445799999999876543


Q ss_pred             ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER  347 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (383)
                      ..+ ..++.   .|+-|.+..|...+       ......-......        .|..+..++.......+..+.+++++
T Consensus        80 ~~~-~~al~---aGkhVl~EKP~a~~-------~~ea~~l~~~a~~--------~g~~~~v~~~~R~~p~~~~~k~~i~~  140 (362)
T 3fhl_A           80 EYA-GMALE---AGKNVVVEKPFTST-------TKQGEELIALAKK--------KGLMLSVYQNRRWDADFLTVRDILAK  140 (362)
T ss_dssp             HHH-HHHHH---TTCEEEEESSCCSS-------HHHHHHHHHHHHH--------HTCCEEEECGGGGSHHHHHHHHHHHT
T ss_pred             HHH-HHHHH---CCCeEEEecCCCCC-------HHHHHHHHHHHHH--------cCCEEEEEecceeCHHHHHHHHHHHc
Confidence            332 55665   45666666553222       1111111111111        11222222222345678889999999


Q ss_pred             CCccc
Q psy9949         348 GQIKP  352 (383)
Q Consensus       348 g~l~~  352 (383)
                      |.+-.
T Consensus       141 G~iG~  145 (362)
T 3fhl_A          141 SLLGR  145 (362)
T ss_dssp             TTTSS
T ss_pred             CCCCC
Confidence            88744

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=93.77  E-value=0.14  Score=49.08  Aligned_cols=37  Identities=27%  Similarity=0.348  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW---DIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~---G~~Vi~~~~~~  223 (383)
                      ..+.+|||+||+|.+|..++..+...   |.+|+++++++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~  110 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAE  110 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCC
Confidence            56789999999999999888777766   88999999764

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=93.75  E-value=0.21  Score=45.64  Aligned_cols=139  Identities=12%  Similarity=0.034  Sum_probs=74.4

Q ss_pred             EEEEEcCCchHHH-HHHHHHHHC-CCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         191 RVLVLGASGGVGT-MAVQLLKAW-DIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       191 ~VlI~ga~g~vG~-~ai~la~~~-G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      +|.|.| +|.+|. ..+..++.. +++++++++.. ..+++++++...+-.+.+  + +.+.+...+|+|+.|+....-.
T Consensus         4 rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~--~-~~ll~~~~~D~V~i~tp~~~h~   79 (349)
T 3i23_A            4 KMGFIG-FGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTAD--L-NELLTDPEIELITICTPAHTHY   79 (349)
T ss_dssp             EEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESC--T-HHHHSCTTCCEEEECSCGGGHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECC--H-HHHhcCCCCCEEEEeCCcHHHH
Confidence            688999 899997 566655544 67999888543 344555543221111222  2 2333445799999999875543


Q ss_pred             ccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHc
Q psy9949         268 INSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIER  347 (383)
Q Consensus       268 ~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (383)
                      ... ..++.   .|+-|.+..|...+       ......-.....        -.|..+..++.......+..+.+++++
T Consensus        80 ~~~-~~al~---aGk~Vl~EKP~a~~-------~~e~~~l~~~a~--------~~g~~~~v~~~~r~~p~~~~~~~~i~~  140 (349)
T 3i23_A           80 DLA-KQAIL---AGKSVIVEKPFCDT-------LEHAEELFALGQ--------EKGVVVMPYQNRRFDGDYLAMKQVVEQ  140 (349)
T ss_dssp             HHH-HHHHH---TTCEEEECSCSCSS-------HHHHHHHHHHHH--------HTTCCEEECCGGGGCHHHHHHHHHHHH
T ss_pred             HHH-HHHHH---cCCEEEEECCCcCC-------HHHHHHHHHHHH--------HcCCeEEEEecccCCHHHHHHHHHHhc
Confidence            332 55555   45666665543222       111111111111        112222112222235667888888998


Q ss_pred             CCccc
Q psy9949         348 GQIKP  352 (383)
Q Consensus       348 g~l~~  352 (383)
                      |.+-.
T Consensus       141 g~iG~  145 (349)
T 3i23_A          141 GFLGE  145 (349)
T ss_dssp             TTTCS
T ss_pred             CCCCC
Confidence            87744

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=93.73  E-value=0.71  Score=41.95  Aligned_cols=137  Identities=13%  Similarity=0.127  Sum_probs=75.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -+|.|.| +|.+|...+..++.. +++++++++..  + .++++++|. .++  .+  +. .+.+...+|+|+.|+....
T Consensus         5 ~rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~--~~--~~-~~l~~~~~D~V~i~tp~~~   77 (344)
T 3euw_A            5 LRIALFG-AGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAV--AS--PD-EVFARDDIDGIVIGSPTST   77 (344)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEE--SS--HH-HHTTCSCCCEEEECSCGGG
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-cee--CC--HH-HHhcCCCCCEEEEeCCchh
Confidence            4799999 799999877777665 67888877443  2 245567773 332  22  22 3333357999999998765


Q ss_pred             ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHH
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFI  345 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  345 (383)
                      ..... ..++.  . |+-|.+..|...+       ......-.....        -.|..+..++.......+..+.+++
T Consensus        78 h~~~~-~~al~--~-gk~v~~EKP~~~~-------~~~~~~l~~~a~--------~~g~~~~v~~~~r~~p~~~~~k~~i  138 (344)
T 3euw_A           78 HVDLI-TRAVE--R-GIPALCEKPIDLD-------IEMVRACKEKIG--------DGASKVMLGFNRRFDPSFAAINARV  138 (344)
T ss_dssp             HHHHH-HHHHH--T-TCCEEECSCSCSC-------HHHHHHHHHHHG--------GGGGGEEECCGGGGCHHHHHHHHHH
T ss_pred             hHHHH-HHHHH--c-CCcEEEECCCCCC-------HHHHHHHHHHHH--------hcCCeEEecchhhcCHHHHHHHHHH
Confidence            44432 55555  4 4445554432211       111111111111        1112222222223356788888999


Q ss_pred             HcCCccc
Q psy9949         346 ERGQIKP  352 (383)
Q Consensus       346 ~~g~l~~  352 (383)
                      ++|.+-.
T Consensus       139 ~~g~iG~  145 (344)
T 3euw_A          139 ANQEIGN  145 (344)
T ss_dssp             HTTTTSS
T ss_pred             hcCCCCc
Confidence            9987743

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=93.69  E-value=1.3  Score=39.66  Aligned_cols=91  Identities=13%  Similarity=0.144  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecCchHHHHHh----cCCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKA-WDI-EVVTTCSGDAKDLVTS----LNPNLVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~-~G~-~Vi~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      +..++++|+| +|.+|...+..++. .+. +|.+..+++..+++++    +|..... .   +..+.+.   +.|+|+.|
T Consensus       119 ~~~~~v~iIG-aG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~-~---~~~eav~---~aDIVi~a  190 (313)
T 3hdj_A          119 PRSSVLGLFG-AGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARM-A---APADIAA---QADIVVTA  190 (313)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEE-C---CHHHHHH---HCSEEEEC
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEE-e---CHHHHHh---hCCEEEEc
Confidence            4568899999 89999888776664 566 7777776633344443    4654222 2   2333332   58999999


Q ss_pred             CCCCcccccccccccccCCCceEEEecCC
Q psy9949         261 AGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       261 ~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ++.......  ...++  ++..++.+|+.
T Consensus       191 T~s~~pvl~--~~~l~--~G~~V~~vGs~  215 (313)
T 3hdj_A          191 TRSTTPLFA--GQALR--AGAFVGAIGSS  215 (313)
T ss_dssp             CCCSSCSSC--GGGCC--TTCEEEECCCS
T ss_pred             cCCCCcccC--HHHcC--CCcEEEECCCC
Confidence            987543222  35677  88788888653

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=93.56  E-value=0.11  Score=44.36  Aligned_cols=96  Identities=14%  Similarity=0.186  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc-hHHHHH----hcCCC-ee--eeCCChHHHHHHhcCCCccEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD-AKDLVT----SLNPN-LV--IDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~-~~~~~~----~lg~~-~v--~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      .++++||-.| +| .|..++.+++.. +.+|++++.++ ..+.++    ..|.. .+  +..+...........+.+|+|
T Consensus        53 ~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I  130 (233)
T 2gpy_A           53 AAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL  130 (233)
T ss_dssp             HCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred             cCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence            6788999998 55 788999999987 56999999554 334333    34542 22  222222211222113579999


Q ss_pred             EEcCCCCcc--cccccccccccCCCceEEEe
Q psy9949         258 LDAAGIPLD--QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       258 ~d~~g~~~~--~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +........  ....+.+.++  ++|+++..
T Consensus       131 ~~~~~~~~~~~~l~~~~~~L~--pgG~lv~~  159 (233)
T 2gpy_A          131 FIDAAKGQYRRFFDMYSPMVR--PGGLILSD  159 (233)
T ss_dssp             EEEGGGSCHHHHHHHHGGGEE--EEEEEEEE
T ss_pred             EECCCHHHHHHHHHHHHHHcC--CCeEEEEE
Confidence            876553211  1112267888  99999874

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=93.53  E-value=0.64  Score=42.00  Aligned_cols=138  Identities=16%  Similarity=0.081  Sum_probs=74.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC--chH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG--DAK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -+|.|.| +|.+|...+..++.. +++++++++.  ++. ++++++|...++  .  ++. .+.+...+|+|+.|+....
T Consensus         6 ~rigiiG-~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~--~--~~~-~ll~~~~~D~V~i~tp~~~   79 (329)
T 3evn_A            6 VRYGVVS-TAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAY--D--KLE-DMLADESIDVIYVATINQD   79 (329)
T ss_dssp             EEEEEEB-CCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEE--S--CHH-HHHTCTTCCEEEECSCGGG
T ss_pred             eEEEEEe-chHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCccc--C--CHH-HHhcCCCCCEEEECCCcHH
Confidence            4799999 799998776666544 5688888743  232 455667765333  2  222 3333457999999998765


Q ss_pred             ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHH
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFI  345 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  345 (383)
                      -.... ..++.   .|+-|.+..|...+       ......-.....        -.+..+..+........+..+.+++
T Consensus        80 h~~~~-~~al~---aGk~Vl~EKP~a~~-------~~e~~~l~~~a~--------~~~~~~~v~~~~r~~p~~~~~~~~i  140 (329)
T 3evn_A           80 HYKVA-KAALL---AGKHVLVEKPFTLT-------YDQANELFALAE--------SCNLFLMEAQKSVFIPMTQVIKKLL  140 (329)
T ss_dssp             HHHHH-HHHHH---TTCEEEEESSCCSS-------HHHHHHHHHHHH--------HTTCCEEEECSSCSSHHHHHHHHHH
T ss_pred             HHHHH-HHHHH---CCCeEEEccCCcCC-------HHHHHHHHHHHH--------HcCCEEEEEEcccCCHHHHHHHHHH
Confidence            43332 45555   45556665543222       111111111111        1122222222223456788888999


Q ss_pred             HcCCccc
Q psy9949         346 ERGQIKP  352 (383)
Q Consensus       346 ~~g~l~~  352 (383)
                      ++|.+-.
T Consensus       141 ~~g~iG~  147 (329)
T 3evn_A          141 ASGEIGE  147 (329)
T ss_dssp             HTTTTCS
T ss_pred             hCCCCCC
Confidence            9988744

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=93.51  E-value=0.049  Score=45.55  Aligned_cols=131  Identities=13%  Similarity=0.077  Sum_probs=71.2

Q ss_pred             CceEEEe-ecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-E
Q psy9949         138 SFSKLIL-ADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-E  215 (383)
Q Consensus       138 ~~a~~~~-v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~  215 (383)
                      .|.+|.. .+....+.+++.+++..+.. +.. ......+.  ..+    +++++||-.| +|. |..+..+++. +. +
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~-~~~~~~l~--~~~----~~~~~vLDiG-~G~-G~~~~~l~~~-~~~~   85 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTT-QLAMLGIE--RAM----VKPLTVADVG-TGS-GILAIAAHKL-GAKS   85 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-HHH-HHHHHHHH--HHC----SSCCEEEEET-CTT-SHHHHHHHHT-TCSE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-ccH-HHHHHHHH--Hhc----cCCCEEEEEC-CCC-CHHHHHHHHC-CCCE
Confidence            4666666 66777788888776555421 111 11111221  124    6788999998 554 7778777774 55 9


Q ss_pred             EEEEecCc-hHHHHH----hcCCC--eeeeCCChHHHHHHhcCCCccEEEEcCCCCcc--cccccccccccCCCceEEEe
Q psy9949         216 VVTTCSGD-AKDLVT----SLNPN--LVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD--QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       216 Vi~~~~~~-~~~~~~----~lg~~--~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~--~~~~~~~~l~~~~~G~~v~~  286 (383)
                      |++++.++ ..+.++    ..+..  .++..+..++     ....+|+|+........  ....+.++++  ++|+++..
T Consensus        86 v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~fD~i~~~~~~~~~~~~l~~~~~~L~--~gG~l~~~  158 (205)
T 3grz_A           86 VLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-----VDGKFDLIVANILAEILLDLIPQLDSHLN--EDGQVIFS  158 (205)
T ss_dssp             EEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-----CCSCEEEEEEESCHHHHHHHGGGSGGGEE--EEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-----CCCCceEEEECCcHHHHHHHHHHHHHhcC--CCCEEEEE
Confidence            99999554 334333    33433  2333222111     12579999976543321  1222267888  99999874

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=93.48  E-value=0.32  Score=42.08  Aligned_cols=75  Identities=31%  Similarity=0.467  Sum_probs=52.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPL  265 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~  265 (383)
                      +|+|.|++|.+|...++.+... +.+++++.+ ++..+.+...++|-++|+..++.......   ..|.++|+.++|...
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~~~   81 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTA   81 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCCCH
Confidence            5899998899999999998866 788887773 33333222346777788776554433322   258899998888554

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=93.47  E-value=0.82  Score=41.52  Aligned_cols=140  Identities=16%  Similarity=0.132  Sum_probs=78.8

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHHC--CCEEEEEecCc--hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASG-GVGTMAVQLLKAW--DIEVVTTCSGD--AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g-~vG~~ai~la~~~--G~~Vi~~~~~~--~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      ..-+|.|.| +| .+|...+..++..  +++++++++..  +. ++++++|...++  .+  +. .+.+...+|+|+.|+
T Consensus        17 ~~irvgiIG-~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~--~~--~~-~ll~~~~vD~V~i~t   90 (340)
T 1zh8_A           17 RKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--DS--YE-ELLESGLVDAVDLTL   90 (340)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--SC--HH-HHHHSSCCSEEEECC
T ss_pred             CceeEEEEe-cCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCccc--CC--HH-HHhcCCCCCEEEEeC
Confidence            334789999 78 7888766666655  56888888543  22 456677764443  22  33 333345799999999


Q ss_pred             CCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHH
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEI  341 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (383)
                      ....-...+ ..+++   .|+-|.+..|...+       ......-....        .-.|..+..++.......+..+
T Consensus        91 p~~~H~~~~-~~al~---aGkhVl~EKPla~~-------~~ea~~l~~~a--------~~~g~~~~v~~~~R~~p~~~~~  151 (340)
T 1zh8_A           91 PVELNLPFI-EKALR---KGVHVICEKPISTD-------VETGKKVVELS--------EKSEKTVYIAENFRHVPAFWKA  151 (340)
T ss_dssp             CGGGHHHHH-HHHHH---TTCEEEEESSSSSS-------HHHHHHHHHHH--------HHCSSCEEEECGGGGCHHHHHH
T ss_pred             CchHHHHHH-HHHHH---CCCcEEEeCCCCCC-------HHHHHHHHHHH--------HHcCCeEEEEecccCCHHHHHH
Confidence            765433332 55565   45667776554222       11111111111        1112222223333345678888


Q ss_pred             HHHHHcCCccc
Q psy9949         342 NKFIERGQIKP  352 (383)
Q Consensus       342 ~~l~~~g~l~~  352 (383)
                      .+++++|.+-.
T Consensus       152 k~~i~~g~iG~  162 (340)
T 1zh8_A          152 KELVESGAIGD  162 (340)
T ss_dssp             HHHHHTTTTSS
T ss_pred             HHHHhcCCCCC
Confidence            89999987744

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=93.46  E-value=0.038  Score=47.06  Aligned_cols=95  Identities=16%  Similarity=0.106  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC------CEEEEEecCc-hHHHHH----hcC-----CCe--eeeCCChH-HHHH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD------IEVVTTCSGD-AKDLVT----SLN-----PNL--VIDYNEPE-AMHS  247 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G------~~Vi~~~~~~-~~~~~~----~lg-----~~~--v~~~~~~~-~~~~  247 (383)
                      +++++||-.| +|. |..++.+++..+      .+|++++.++ ..+.++    ..+     .+.  ++..+... +.+.
T Consensus        79 ~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~  156 (227)
T 2pbf_A           79 KPGSRAIDVG-SGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE  156 (227)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence            7889999999 554 889999999876      5999999554 333332    333     222  22222211 1011


Q ss_pred             HhcCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         248 IAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       248 i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ......+|+|+........... +.+.++  ++|+++..
T Consensus       157 ~~~~~~fD~I~~~~~~~~~~~~-~~~~Lk--pgG~lv~~  192 (227)
T 2pbf_A          157 KKELGLFDAIHVGASASELPEI-LVDLLA--ENGKLIIP  192 (227)
T ss_dssp             HHHHCCEEEEEECSBBSSCCHH-HHHHEE--EEEEEEEE
T ss_pred             CccCCCcCEEEECCchHHHHHH-HHHhcC--CCcEEEEE
Confidence            1223579999987665544333 267889  99999876

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=93.44  E-value=0.66  Score=42.17  Aligned_cols=137  Identities=18%  Similarity=0.198  Sum_probs=76.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +|.|.| +|.+|...+..++.. +++++++++..  + .++++++|...++.    ++. .+.+...+|+|+.|+.....
T Consensus         4 rvgiIG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~----~~~-~ll~~~~~D~V~i~tp~~~h   77 (344)
T 3ezy_A            4 RIGVIG-LGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK----DPH-ELIEDPNVDAVLVCSSTNTH   77 (344)
T ss_dssp             EEEEEC-CSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES----SHH-HHHHCTTCCEEEECSCGGGH
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC----CHH-HHhcCCCCCEEEEcCCCcch
Confidence            689999 899998866666554 66888887443  3 24556777654432    222 23333579999999987654


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE  346 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (383)
                      .... ..++.  . |+-|.+..|...+       ......-.....        -.|..+..++.......+..+.++++
T Consensus        78 ~~~~-~~al~--~-gk~v~~EKP~~~~-------~~e~~~l~~~a~--------~~g~~~~v~~~~R~~p~~~~~k~~i~  138 (344)
T 3ezy_A           78 SELV-IACAK--A-KKHVFCEKPLSLN-------LADVDRMIEETK--------KADVILFTGFNRRFDRNFKKLKEAVE  138 (344)
T ss_dssp             HHHH-HHHHH--T-TCEEEEESCSCSC-------HHHHHHHHHHHH--------HHTCCEEEECGGGGCHHHHHHHHHHH
T ss_pred             HHHH-HHHHh--c-CCeEEEECCCCCC-------HHHHHHHHHHHH--------HhCCcEEEeecccCCHHHHHHHHHHH
Confidence            3332 45555  4 4555665443221       111111111111        11222222333334577888899999


Q ss_pred             cCCccc
Q psy9949         347 RGQIKP  352 (383)
Q Consensus       347 ~g~l~~  352 (383)
                      +|.+-.
T Consensus       139 ~G~iG~  144 (344)
T 3ezy_A          139 NGTIGK  144 (344)
T ss_dssp             TTTTSS
T ss_pred             cCCCCC
Confidence            987743

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=93.39  E-value=0.79  Score=41.39  Aligned_cols=138  Identities=14%  Similarity=0.061  Sum_probs=77.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-c-h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-D-A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~-~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -+|.|.| +|.+|...+..++.. +++++++++. . + .++++++|...++  .  ++. .+.+...+|+|+.|+....
T Consensus         6 ~~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~--~--~~~-~ll~~~~~D~V~i~tp~~~   79 (330)
T 3e9m_A            6 IRYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAY--G--SYE-ELCKDETIDIIYIPTYNQG   79 (330)
T ss_dssp             EEEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCB--S--SHH-HHHHCTTCSEEEECCCGGG
T ss_pred             EEEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCcee--C--CHH-HHhcCCCCCEEEEcCCCHH
Confidence            4799999 799998877777765 6688888743 3 3 2456677764332  2  222 3333457999999998765


Q ss_pred             ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHH
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFI  345 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  345 (383)
                      ..... ..++.  . |+-|.+..|...+       ......-.....        -.|..+..++.......+..+.+++
T Consensus        80 h~~~~-~~al~--~-gk~vl~EKP~~~~-------~~e~~~l~~~a~--------~~g~~~~v~~~~r~~p~~~~~k~~i  140 (330)
T 3e9m_A           80 HYSAA-KLALS--Q-GKPVLLEKPFTLN-------AAEAEELFAIAQ--------EQGVFLMEAQKSVFLPITQKVKATI  140 (330)
T ss_dssp             HHHHH-HHHHH--T-TCCEEECSSCCSS-------HHHHHHHHHHHH--------HTTCCEEECCSGGGCHHHHHHHHHH
T ss_pred             HHHHH-HHHHH--C-CCeEEEeCCCCCC-------HHHHHHHHHHHH--------HcCCeEEEEEhhhhCHHHHHHHHHH
Confidence            44432 55565  4 4445554443221       111111111111        1122222222223456788888999


Q ss_pred             HcCCccc
Q psy9949         346 ERGQIKP  352 (383)
Q Consensus       346 ~~g~l~~  352 (383)
                      ++|.+-.
T Consensus       141 ~~g~iG~  147 (330)
T 3e9m_A          141 QEGGLGE  147 (330)
T ss_dssp             HTTTTCS
T ss_pred             hCCCCCC
Confidence            9987743

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=93.38  E-value=0.12  Score=46.97  Aligned_cols=34  Identities=12%  Similarity=0.194  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecC
Q psy9949         189 DKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       189 ~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      +++++|+|+++  ++|.++++.+...|++|++++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~   37 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence            57899999765  99999999888899999988744

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=93.33  E-value=0.63  Score=42.10  Aligned_cols=137  Identities=13%  Similarity=0.122  Sum_probs=77.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD---IEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G---~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++.|.| +|.+|...+..++..+   ++++++++..  + .++++++|...++  .  ++. .+.+...+|+|+.|+...
T Consensus         4 rigiiG-~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~--~--~~~-~ll~~~~vD~V~i~tp~~   77 (334)
T 3ohs_X            4 RWGIVS-VGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAY--G--SYE-ELAKDPNVEVAYVGTQHP   77 (334)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEE--S--SHH-HHHHCTTCCEEEECCCGG
T ss_pred             EEEEEC-chHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCccc--C--CHH-HHhcCCCCCEEEECCCcH
Confidence            688999 8999988776666543   4788887443  2 3466778875443  2  222 333345799999999776


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKF  344 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  344 (383)
                      .-...+ ..++.   .|+-|.+..|...+       ......-.....        -.+..+..+........+..+.++
T Consensus        78 ~H~~~~-~~al~---~GkhVl~EKP~a~~-------~~e~~~l~~~a~--------~~~~~~~v~~~~r~~p~~~~~k~~  138 (334)
T 3ohs_X           78 QHKAAV-MLCLA---AGKAVLCEKPMGVN-------AAEVREMVTEAR--------SRGLFLMEAIWTRFFPASEALRSV  138 (334)
T ss_dssp             GHHHHH-HHHHH---TTCEEEEESSSSSS-------HHHHHHHHHHHH--------HTTCCEEEECGGGGSHHHHHHHHH
T ss_pred             HHHHHH-HHHHh---cCCEEEEECCCCCC-------HHHHHHHHHHHH--------HhCCEEEEEEhHhcCHHHHHHHHH
Confidence            543332 45555   45667776554322       111111111111        112222222222335678888899


Q ss_pred             HHcCCccc
Q psy9949         345 IERGQIKP  352 (383)
Q Consensus       345 ~~~g~l~~  352 (383)
                      +++|.+-.
T Consensus       139 i~~g~iG~  146 (334)
T 3ohs_X          139 LAQGTLGD  146 (334)
T ss_dssp             HHHTTTCS
T ss_pred             HhcCCCCC
Confidence            99887743

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=93.32  E-value=0.27  Score=43.30  Aligned_cols=88  Identities=24%  Similarity=0.315  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCC--C-eeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNP--N-LVIDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~--~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      .+++++|+| +|++|.+++..+...|++|++..++. +. +++++++.  . .+.+.      +.+.+ +.+|++|++++
T Consensus       118 ~~~~vlvlG-aGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~~~~-~~~DivIn~t~  189 (272)
T 1p77_A          118 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM------DSIPL-QTYDLVINATS  189 (272)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCCC-SCCSEEEECCC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH------HHhcc-CCCCEEEECCC
Confidence            578999999 69999999988888899999888764 32 44444432  1 12221      11111 47999999998


Q ss_pred             CCcccc---cccccccccCCCceEEEe
Q psy9949         263 IPLDQI---NSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       263 ~~~~~~---~~~~~~l~~~~~G~~v~~  286 (383)
                      ......   .. ..++.  ++..++++
T Consensus       190 ~~~~~~~~~i~-~~~l~--~~~~v~D~  213 (272)
T 1p77_A          190 AGLSGGTASVD-AEILK--LGSAFYDM  213 (272)
T ss_dssp             C-------CCC-HHHHH--HCSCEEES
T ss_pred             CCCCCCCCCCC-HHHcC--CCCEEEEe
Confidence            754311   10 23445  56666666

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=93.31  E-value=0.29  Score=45.52  Aligned_cols=89  Identities=15%  Similarity=0.139  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .|++|.|.| .|.+|..+++.++.+|++|++.++.. ..+.+.++|+..+   .  ++.+-+   ...|+|+.++.....
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~---~--~l~ell---~~aDvV~l~~Plt~~  260 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH---A--TREDMY---PVCDVVTLNCPLHPE  260 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC---S--SHHHHG---GGCSEEEECSCCCTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec---C--CHHHHH---hcCCEEEEecCCchH
Confidence            578999999 99999999999999999999988653 4455566675321   1  122222   258999988774321


Q ss_pred             ----cccccccccccCCCceEEEec
Q psy9949         267 ----QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ----~~~~~~~~l~~~~~G~~v~~~  287 (383)
                          .....++.|+  ++..+|.++
T Consensus       261 t~~li~~~~l~~mk--~gailIN~a  283 (393)
T 2nac_A          261 TEHMINDETLKLFK--RGAYIVNTA  283 (393)
T ss_dssp             TTTCBSHHHHTTSC--TTEEEEECS
T ss_pred             HHHHhhHHHHhhCC--CCCEEEECC
Confidence                1111256777  888888774

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=93.31  E-value=0.53  Score=44.05  Aligned_cols=138  Identities=14%  Similarity=0.087  Sum_probs=80.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC---------CCEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW---------DIEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~---------G~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      =+|.|.| +|.+|..-+...+..         +++++++++..  + .++++++|...++.    ++. .+.+...+|+|
T Consensus        27 lrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~----d~~-~ll~~~~vD~V  100 (412)
T 4gqa_A           27 LNIGLIG-SGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG----DWR-ELVNDPQVDVV  100 (412)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES----SHH-HHHHCTTCCEE
T ss_pred             ceEEEEc-CcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC----CHH-HHhcCCCCCEE
Confidence            4799999 899998655554432         45899998543  2 34667888876542    233 33344679999


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHH
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYA  337 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (383)
                      +.|+....-...+ ..+++   .|+=|.+..|...+.       .....-.....        -.|..+..++.......
T Consensus       101 ~I~tp~~~H~~~~-~~al~---aGkhVl~EKP~a~~~-------~ea~~l~~~a~--------~~g~~~~v~~~~R~~p~  161 (412)
T 4gqa_A          101 DITSPNHLHYTMA-MAAIA---AGKHVYCEKPLAVNE-------QQAQEMAQAAR--------RAGVKTMVAFNNIKTPA  161 (412)
T ss_dssp             EECSCGGGHHHHH-HHHHH---TTCEEEEESCSCSSH-------HHHHHHHHHHH--------HHTCCEEEECGGGTSHH
T ss_pred             EECCCcHHHHHHH-HHHHH---cCCCeEeecCCcCCH-------HHHHHHHHHHH--------HhCCeeeeccceecCHH
Confidence            9998876543332 55665   456677766543321       11111111111        11122222333334677


Q ss_pred             HHHHHHHHHcCCccc
Q psy9949         338 VKEINKFIERGQIKP  352 (383)
Q Consensus       338 ~~~~~~l~~~g~l~~  352 (383)
                      +..+.+++++|.|-.
T Consensus       162 ~~~~k~~i~~G~iG~  176 (412)
T 4gqa_A          162 ALLAKQIIARGDIGE  176 (412)
T ss_dssp             HHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHhcCCcCC
Confidence            888899999998744

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=93.29  E-value=0.72  Score=42.13  Aligned_cols=138  Identities=10%  Similarity=0.057  Sum_probs=76.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc--hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD--AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~--~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .-+|.|.| +|.+|...+..++..  +++++++++..  +. ++++++|+ .++  .+  +.+ +.+...+|+|+.|+..
T Consensus        13 ~~rvgiiG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~~--~~~-ll~~~~~D~V~i~tp~   85 (354)
T 3q2i_A           13 KIRFALVG-CGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--AS--LTD-MLAQTDADIVILTTPS   85 (354)
T ss_dssp             CEEEEEEC-CSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--SC--HHH-HHHHCCCSEEEECSCG
T ss_pred             cceEEEEc-CcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--CC--HHH-HhcCCCCCEEEECCCc
Confidence            34799999 899998777776665  67888887443  32 45567776 332  22  222 2223579999999987


Q ss_pred             CcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHH
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINK  343 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (383)
                      ..-.... ..++.  . |+-|.+..|...+       ......-......        .|..+..++.......+..+.+
T Consensus        86 ~~h~~~~-~~al~--~-gk~v~~EKP~a~~-------~~~~~~l~~~a~~--------~g~~~~v~~~~r~~p~~~~~k~  146 (354)
T 3q2i_A           86 GLHPTQS-IECSE--A-GFHVMTEKPMATR-------WEDGLEMVKAADK--------AKKHLFVVKQNRRNATLQLLKR  146 (354)
T ss_dssp             GGHHHHH-HHHHH--T-TCEEEECSSSCSS-------HHHHHHHHHHHHH--------HTCCEEECCGGGGSHHHHHHHH
T ss_pred             HHHHHHH-HHHHH--C-CCCEEEeCCCcCC-------HHHHHHHHHHHHH--------hCCeEEEEEcccCCHHHHHHHH
Confidence            6543332 55555  4 5556665543221       1111111111110        1111211222223457888999


Q ss_pred             HHHcCCccc
Q psy9949         344 FIERGQIKP  352 (383)
Q Consensus       344 l~~~g~l~~  352 (383)
                      ++++|.+-.
T Consensus       147 ~i~~g~iG~  155 (354)
T 3q2i_A          147 AMQEKRFGR  155 (354)
T ss_dssp             HHHTTTTCS
T ss_pred             HHhcCCCCc
Confidence            999998754

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=93.27  E-value=0.26  Score=45.03  Aligned_cols=89  Identities=15%  Similarity=0.119  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-c
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-D  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-~  266 (383)
                      .+.+|.|.| .|.+|..+++.++.+|++|++.++....+.....|+..+   .  ++.+-+.   ..|+|+-++.... .
T Consensus       167 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~---~--~l~ell~---~aDvV~l~~P~t~~t  237 (347)
T 1mx3_A          167 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRV---S--TLQDLLF---HSDCVTLHCGLNEHN  237 (347)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEEC---S--SHHHHHH---HCSEEEECCCCCTTC
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeec---C--CHHHHHh---cCCEEEEcCCCCHHH
Confidence            578999999 999999999999999999999885433333455665321   1  1222222   4789988876432 1


Q ss_pred             ---cccccccccccCCCceEEEec
Q psy9949         267 ---QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ---~~~~~~~~l~~~~~G~~v~~~  287 (383)
                         .....++.++  ++..+|.++
T Consensus       238 ~~li~~~~l~~mk--~gailIN~a  259 (347)
T 1mx3_A          238 HHLINDFTVKQMR--QGAFLVNTA  259 (347)
T ss_dssp             TTSBSHHHHTTSC--TTEEEEECS
T ss_pred             HHHhHHHHHhcCC--CCCEEEECC
Confidence               1111256677  888888774

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=93.24  E-value=0.19  Score=45.12  Aligned_cols=90  Identities=18%  Similarity=0.237  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH----hcCCC---eeeeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT----SLNPN---LVIDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~----~lg~~---~v~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      +++++||-.| +|. |..+..+++..|++|++++.+ +..+.++    +.|..   .+...+..++      .+.+|+|+
T Consensus        89 ~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~fD~v~  160 (318)
T 2fk8_A           89 KPGMTLLDIG-CGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF------AEPVDRIV  160 (318)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC------CCCCSEEE
T ss_pred             CCcCEEEEEc-ccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC------CCCcCEEE
Confidence            7889999999 554 888999998879999999955 4444443    33432   1222221111      15799999


Q ss_pred             EcC-----CCCc--ccccccccccccCCCceEEEe
Q psy9949         259 DAA-----GIPL--DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~-----g~~~--~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...     +.+.  .....+.++++  ++|+++..
T Consensus       161 ~~~~l~~~~~~~~~~~l~~~~~~Lk--pgG~l~~~  193 (318)
T 2fk8_A          161 SIEAFEHFGHENYDDFFKRCFNIMP--ADGRMTVQ  193 (318)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSC--TTCEEEEE
T ss_pred             EeChHHhcCHHHHHHHHHHHHHhcC--CCcEEEEE
Confidence            763     2111  11111256788  99999875

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=93.19  E-value=0.23  Score=44.66  Aligned_cols=35  Identities=23%  Similarity=0.204  Sum_probs=30.9

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGA--SGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga--~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .+++++|+||  ++++|.++++.+...|++|++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            5789999998  7999999999888889999998753

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=93.19  E-value=0.036  Score=48.54  Aligned_cols=70  Identities=27%  Similarity=0.372  Sum_probs=46.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      ++|||+||+|.+|..++..+...|.+|++++++.....  ..+. .+  .|..+.+....+.  .++|+||.+++..
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~-~~~~~Dl~d~~~~~~~~--~~~d~vi~~a~~~   74 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--EAHE-EIVACDLADAQAVHDLV--KDCDGIIHLGGVS   74 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--CTTE-EECCCCTTCHHHHHHHH--TTCSEEEECCSCC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--CCCc-cEEEccCCCHHHHHHHH--cCCCEEEECCcCC
Confidence            47999999999999999888888999999986543211  1121 12  2344433222222  3699999998753

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=93.15  E-value=0.08  Score=45.53  Aligned_cols=96  Identities=13%  Similarity=0.085  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHH----hcCCCe-e--eeCCChHHHHHHhc------
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVT----SLNPNL-V--IDYNEPEAMHSIAG------  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~----~lg~~~-v--~~~~~~~~~~~i~~------  250 (383)
                      .++++||-.| +| .|..+..+++..  +.+|++++.++ ..+.++    +.|... +  +..+.......+..      
T Consensus        59 ~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~  136 (239)
T 2hnk_A           59 SGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS  136 (239)
T ss_dssp             HTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred             hCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence            6788999998 44 699999999987  56999999554 334333    345432 2  22222222222221      


Q ss_pred             -------C-CCccEEEEcCCCCccc--ccccccccccCCCceEEEe
Q psy9949         251 -------A-GPYDVILDAAGIPLDQ--INSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 -------~-~g~d~v~d~~g~~~~~--~~~~~~~l~~~~~G~~v~~  286 (383)
                             . +.+|+|+...+.....  ...+.+.++  ++|.++..
T Consensus       137 ~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~--pgG~lv~~  180 (239)
T 2hnk_A          137 WASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLK--PGGLLIAD  180 (239)
T ss_dssp             GGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             ccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcC--CCeEEEEE
Confidence                   1 5799999876543221  111267888  99999874

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=93.07  E-value=0.37  Score=43.77  Aligned_cols=87  Identities=18%  Similarity=0.147  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-  266 (383)
                      .+.+|.|.| .|.+|..+++.++.+|++|++.++..+.. +.+. +..+     .++.+.+   ...|+|+.++..... 
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~~~-----~~l~ell---~~aDvV~l~~p~~~~t  213 (333)
T 1j4a_A          145 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPE-LEKK-GYYV-----DSLDDLY---KQADVISLHVPDVPAN  213 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHT-TCBC-----SCHHHHH---HHCSEEEECSCCCGGG
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchh-HHhh-Ceec-----CCHHHHH---hhCCEEEEcCCCcHHH
Confidence            467999999 89999999999999999999998654433 2332 2211     1222222   248999998875432 


Q ss_pred             cc---cccccccccCCCceEEEec
Q psy9949         267 QI---NSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ~~---~~~~~~l~~~~~G~~v~~~  287 (383)
                      ..   ...++.++  +++.+|.++
T Consensus       214 ~~li~~~~l~~mk--~ga~lIn~a  235 (333)
T 1j4a_A          214 VHMINDESIAKMK--QDVVIVNVS  235 (333)
T ss_dssp             TTCBSHHHHHHSC--TTEEEEECS
T ss_pred             HHHHhHHHHhhCC--CCcEEEECC
Confidence            11   11156677  888888874

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=93.03  E-value=0.47  Score=43.12  Aligned_cols=88  Identities=14%  Similarity=0.243  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-  266 (383)
                      .+.+|.|.| .|.+|..+++.++..|.+|++.+++.+.+.+.++|..  .  .  ++.+.+.   ..|+|+.++..... 
T Consensus       149 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~--~--~--~l~~~l~---~aDvVil~vp~~~~t  218 (334)
T 2dbq_A          149 YGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAE--F--K--PLEDLLR---ESDFVVLAVPLTRET  218 (334)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCE--E--C--CHHHHHH---HCSEEEECCCCCTTT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcc--c--C--CHHHHHh---hCCEEEECCCCChHH
Confidence            567999999 8999999999999999999999865443555556652  1  1  2322222   48999999876542 


Q ss_pred             ccc---ccccccccCCCceEEEec
Q psy9949         267 QIN---SYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ~~~---~~~~~l~~~~~G~~v~~~  287 (383)
                      ...   ..+..++  ++..++.++
T Consensus       219 ~~~i~~~~~~~mk--~~ailIn~s  240 (334)
T 2dbq_A          219 YHLINEERLKLMK--KTAILINIA  240 (334)
T ss_dssp             TTCBCHHHHHHSC--TTCEEEECS
T ss_pred             HHhhCHHHHhcCC--CCcEEEECC
Confidence            111   1145667  777887764

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=93.01  E-value=0.11  Score=45.86  Aligned_cols=94  Identities=17%  Similarity=0.177  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHHh----c-C--CCee-eeCCChHHHHHHhcCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVTS----L-N--PNLV-IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~~----l-g--~~~v-~~~~~~~~~~~i~~~~g~d  255 (383)
                      +++++||-.| +| .|..++.+++..  +.+|++++.++ ..+.+++    . |  .+++ +...  +..+.....+.+|
T Consensus        98 ~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~--d~~~~~~~~~~~D  173 (280)
T 1i9g_A           98 FPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS--DLADSELPDGSVD  173 (280)
T ss_dssp             CTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS--CGGGCCCCTTCEE
T ss_pred             CCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC--chHhcCCCCCcee
Confidence            8899999998 55 788899999875  45999999543 3444332    2 4  2322 1111  1111111234699


Q ss_pred             EEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         256 VILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       256 ~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +|+.....+......+.++++  ++|+++..
T Consensus       174 ~v~~~~~~~~~~l~~~~~~L~--pgG~l~~~  202 (280)
T 1i9g_A          174 RAVLDMLAPWEVLDAVSRLLV--AGGVLMVY  202 (280)
T ss_dssp             EEEEESSCGGGGHHHHHHHEE--EEEEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCC--CCCEEEEE
Confidence            999866655332222367888  99999876

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=93.00  E-value=0.25  Score=44.92  Aligned_cols=87  Identities=14%  Similarity=0.159  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-c
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-D  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-~  266 (383)
                      .+.+|.|.| .|.+|..+++.++..|.+|++.+++.+.+.+.+.|...    .  ++.+.+.   ..|+|+.++.... .
T Consensus       145 ~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~--~l~e~l~---~aDiVil~vp~~~~t  214 (333)
T 2d0i_A          145 YGKKVGILG-MGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARY----M--DIDELLE---KSDIVILALPLTRDT  214 (333)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEE----C--CHHHHHH---HCSEEEECCCCCTTT
T ss_pred             CcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCcee----c--CHHHHHh---hCCEEEEcCCCChHH
Confidence            577999999 89999999999999999999998665445455555421    1  2222222   4799999887652 1


Q ss_pred             ccc---ccccccccCCCceEEEec
Q psy9949         267 QIN---SYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ~~~---~~~~~l~~~~~G~~v~~~  287 (383)
                      ...   ..++.++  ++ .++.++
T Consensus       215 ~~~i~~~~~~~mk--~g-ilin~s  235 (333)
T 2d0i_A          215 YHIINEERVKKLE--GK-YLVNIG  235 (333)
T ss_dssp             TTSBCHHHHHHTB--TC-EEEECS
T ss_pred             HHHhCHHHHhhCC--CC-EEEECC
Confidence            111   1145566  77 776664

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=93.00  E-value=0.79  Score=40.46  Aligned_cols=84  Identities=24%  Similarity=0.383  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCch-H-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDA-K-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~-~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+++++|.| +|++|.+++..+...|+ +|+++.++.+ . ++++++.   ...+      +.+.+. .+|+||+|++..
T Consensus       121 ~~k~vlvlG-aGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~------~~l~~l-~~DivInaTp~G  189 (282)
T 3fbt_A          121 KNNICVVLG-SGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISY------DELSNL-KGDVIINCTPKG  189 (282)
T ss_dssp             TTSEEEEEC-SSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEH------HHHTTC-CCSEEEECSSTT
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccH------HHHHhc-cCCEEEECCccC
Confidence            678999999 79999999999999999 8888887643 2 3334332   2222      122223 799999998642


Q ss_pred             cc------cccccccccccCCCceEEEe
Q psy9949         265 LD------QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       265 ~~------~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ..      ...  ...+.  ++..++++
T Consensus       190 m~~~~~~~pi~--~~~l~--~~~~v~Dl  213 (282)
T 3fbt_A          190 MYPKEGESPVD--KEVVA--KFSSAVDL  213 (282)
T ss_dssp             STTSTTCCSSC--HHHHT--TCSEEEES
T ss_pred             ccCCCccCCCC--HHHcC--CCCEEEEE
Confidence            11      112  44566  66666665

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=92.97  E-value=0.12  Score=45.67  Aligned_cols=70  Identities=17%  Similarity=0.215  Sum_probs=45.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ..+|||+| +|.+|..++..+...|.+|++++++....   ..+...+ .|..+.+....+.+ +.+|+||.+++.
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~-~~~d~vih~a~~   73 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVH-LRPEILVYCVAA   73 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGG-GCCSEEEECHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhc-CCCCEEEEeCCC
Confidence            35799999 69999999999998999999999654320   1222222 24444322222221 249999998864

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=92.95  E-value=0.13  Score=42.84  Aligned_cols=93  Identities=10%  Similarity=0.025  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCc-hHHHHH----hcCCCee--eeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGD-AKDLVT----SLNPNLV--IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~-~~~~~~----~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      +++++||-.| +| .|..++.+++... .+|++++.++ ..+.++    ..+.+.+  +..+.   .+.+.....+|+|+
T Consensus        39 ~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~D~i~  113 (204)
T 3e05_A           39 QDDLVMWDIG-AG-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PEGLDDLPDPDRVF  113 (204)
T ss_dssp             CTTCEEEEET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TTTCTTSCCCSEEE
T ss_pred             CCCCEEEEEC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hhhhhcCCCCCEEE
Confidence            7899999999 55 4889999999863 5999999554 344333    3444322  22221   11122235699999


Q ss_pred             EcCCCCcc--cccccccccccCCCceEEEe
Q psy9949         259 DAAGIPLD--QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~g~~~~--~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ........  ....+.+.++  ++|+++..
T Consensus       114 ~~~~~~~~~~~l~~~~~~Lk--pgG~l~~~  141 (204)
T 3e05_A          114 IGGSGGMLEEIIDAVDRRLK--SEGVIVLN  141 (204)
T ss_dssp             ESCCTTCHHHHHHHHHHHCC--TTCEEEEE
T ss_pred             ECCCCcCHHHHHHHHHHhcC--CCeEEEEE
Confidence            87653221  1111267788  99999875

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=92.95  E-value=0.35  Score=42.69  Aligned_cols=86  Identities=15%  Similarity=0.199  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchH-H-HHHhcCCCeeeeCCChHHHHHHhc-CCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAK-D-LVTSLNPNLVIDYNEPEAMHSIAG-AGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~-~-~~~~lg~~~v~~~~~~~~~~~i~~-~~g~d~v~d~~g~  263 (383)
                      .+++++|+| +|++|.+++..+...|+ +|+++.++.+. + ++.++   ....     +. .+.+ ...+|+||++++.
T Consensus       116 ~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~---~~~~-----~~-~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          116 EDAYILILG-AGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI---NKIN-----LS-HAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC---EEEC-----HH-HHHHTGGGCSEEEECCC-
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc---cccc-----Hh-hHHHHhcCCCEEEECccC
Confidence            578899999 79999999999999999 88888766432 2 22111   1111     11 2222 2468999999875


Q ss_pred             Ccccc----cccccccccCCCceEEEe
Q psy9949         264 PLDQI----NSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ~~~~~----~~~~~~l~~~~~G~~v~~  286 (383)
                      .....    .. ...++  ++..++++
T Consensus       186 Gm~~~~~~~l~-~~~l~--~~~~V~D~  209 (277)
T 3don_A          186 GMNGNTDSVIS-LNRLA--SHTLVSDI  209 (277)
T ss_dssp             ------CCSSC-CTTCC--SSCEEEES
T ss_pred             CCCCCCcCCCC-HHHcC--CCCEEEEe
Confidence            32111    11 44566  77777776

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=92.91  E-value=0.46  Score=42.08  Aligned_cols=89  Identities=16%  Similarity=0.248  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCC----Ce--eeeCCChHHHHHHhcCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNP----NL--VIDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~----~~--v~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      .+++++|+| +|++|.+++..+...| +|+++.++. +. +++++++.    ..  .++..+  +   ....+++|++|+
T Consensus       127 ~~k~vlV~G-aGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~--~---~~~~~~~DilVn  199 (287)
T 1nvt_A          127 KDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG--L---DVDLDGVDIIIN  199 (287)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC--T---TCCCTTCCEEEE
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee--H---HHhhCCCCEEEE
Confidence            578999999 5799999999998889 998888663 32 33333321    00  011111  1   112357999999


Q ss_pred             cCCCCccc------c-cccccccccCCCceEEEec
Q psy9949         260 AAGIPLDQ------I-NSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       260 ~~g~~~~~------~-~~~~~~l~~~~~G~~v~~~  287 (383)
                      ++|.....      . .  .+.+.  ++..++++.
T Consensus       200 ~ag~~~~~~~~~~~~~~--~~~l~--~~~~v~Dv~  230 (287)
T 1nvt_A          200 ATPIGMYPNIDVEPIVK--AEKLR--EDMVVMDLI  230 (287)
T ss_dssp             CSCTTCTTCCSSCCSSC--STTCC--SSSEEEECC
T ss_pred             CCCCCCCCCCCCCCCCC--HHHcC--CCCEEEEee
Confidence            99865431      1 1  34556  666677763

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=92.88  E-value=0.19  Score=46.42  Aligned_cols=92  Identities=13%  Similarity=0.201  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-----ch---H-----HHHHhcCCCeeeeCCChHHHHHHhcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-----DA---K-----DLVTSLNPNLVIDYNEPEAMHSIAGAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-----~~---~-----~~~~~lg~~~v~~~~~~~~~~~i~~~~g  253 (383)
                      +..+|+|.| +|..|..+++++..+|+ +|+.++++     ++   +     .+++....    ..+..++.+.++   +
T Consensus       187 ~d~kVVi~G-AGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~----~~~~~~L~eav~---~  258 (398)
T 2a9f_A          187 DEVSIVVNG-GGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR----EFKSGTLEDALE---G  258 (398)
T ss_dssp             TSCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC----TTCCCSCSHHHH---T
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCc----ccchhhHHHHhc---c
Confidence            557899999 89999999999999999 99999864     11   1     12211100    001122333333   4


Q ss_pred             ccEEEEcCCCCcccccccccccccCCCceEEEecCCC
Q psy9949         254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      +|++|-+++ +......+++.|+  ++-.++.+.+|.
T Consensus       259 ADV~IG~Sa-pgl~T~EmVk~Ma--~~pIIfalsNPt  292 (398)
T 2a9f_A          259 ADIFIGVSA-PGVLKAEWISKMA--ARPVIFAMANPI  292 (398)
T ss_dssp             TCSEEECCS-TTCCCHHHHHTSC--SSCEEEECCSSS
T ss_pred             CCEEEecCC-CCCCCHHHHHhhC--CCCEEEECCCCC
Confidence            788888876 3332222377777  777777776654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=92.86  E-value=0.48  Score=37.41  Aligned_cols=75  Identities=17%  Similarity=0.191  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHHHHH---hcCCCeee--eCCChHHHHHHhcCCCccEEEEcC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKDLVT---SLNPNLVI--DYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~~~~---~lg~~~v~--~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      .++++|.| .|.+|..+++.+...|.+|++++++.  +.+.+.   ..|.. ++  |..+.+..... ...++|+|+-++
T Consensus         3 ~~~vlI~G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a-~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKA-GIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHH-TTTTCSEEEECS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHc-ChhhCCEEEEec
Confidence            46799999 79999999999999999999999752  222222   22433 33  23322221111 235899999999


Q ss_pred             CCCcc
Q psy9949         262 GIPLD  266 (383)
Q Consensus       262 g~~~~  266 (383)
                      +....
T Consensus        80 ~~d~~   84 (153)
T 1id1_A           80 DNDAD   84 (153)
T ss_dssp             SCHHH
T ss_pred             CChHH
Confidence            87643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=92.83  E-value=0.27  Score=46.74  Aligned_cols=72  Identities=22%  Similarity=0.313  Sum_probs=46.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH-HHHhcCCCee--eeCCCh-HHHHHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD-LVTSLNPNLV--IDYNEP-EAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~-~~~~lg~~~v--~~~~~~-~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +.+|+|+| +|++|..++..+...|++|++.+++.. .+ ++..++....  .|..+. ++.+.+   .++|+|++|++.
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l---~~~DvVIn~a~~   78 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV---AKHDLVISLIPY   78 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHH---TTSSEEEECCC-
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHH---cCCcEEEECCcc
Confidence            46899998 899999998888888999888876542 22 3333432112  233332 222222   379999999986


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        79 ~   79 (450)
T 1ff9_A           79 T   79 (450)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=92.77  E-value=0.16  Score=43.19  Aligned_cols=92  Identities=15%  Similarity=0.225  Sum_probs=58.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEecCc-hHHHHH----hcC-----CC--eeeeCCChHHHHH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD-------IEVVTTCSGD-AKDLVT----SLN-----PN--LVIDYNEPEAMHS  247 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G-------~~Vi~~~~~~-~~~~~~----~lg-----~~--~v~~~~~~~~~~~  247 (383)
                      +++++||-.| +|. |..+..+++..+       .+|++++.++ ..+.++    +.+     ..  .+...+..   +.
T Consensus        83 ~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~---~~  157 (227)
T 1r18_A           83 KPGARILDVG-SGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGR---KG  157 (227)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGG---GC
T ss_pred             CCCCEEEEEC-CCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcc---cC
Confidence            7889999998 554 888888988766       4999999554 333332    222     12  22222211   11


Q ss_pred             HhcCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         248 IAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       248 i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +.+.+.+|+|+........... +.+.|+  ++|+++..
T Consensus       158 ~~~~~~fD~I~~~~~~~~~~~~-~~~~Lk--pgG~lvi~  193 (227)
T 1r18_A          158 YPPNAPYNAIHVGAAAPDTPTE-LINQLA--SGGRLIVP  193 (227)
T ss_dssp             CGGGCSEEEEEECSCBSSCCHH-HHHTEE--EEEEEEEE
T ss_pred             CCcCCCccEEEECCchHHHHHH-HHHHhc--CCCEEEEE
Confidence            1223579999987766554333 378899  99999875

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=92.70  E-value=0.12  Score=44.07  Aligned_cols=92  Identities=17%  Similarity=0.137  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHh----cCCCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTS----LNPNLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~----lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +++++||-.| +|. |..+..+++.. .+|++++.++ ..+.+++    .+...++..+..   +.+...+.+|+|+...
T Consensus        69 ~~~~~vLdiG-~G~-G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~---~~~~~~~~fD~v~~~~  142 (231)
T 1vbf_A           69 HKGQKVLEIG-TGI-GYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGT---LGYEEEKPYDRVVVWA  142 (231)
T ss_dssp             CTTCEEEEEC-CTT-SHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGG---GCCGGGCCEEEEEESS
T ss_pred             CCCCEEEEEc-CCC-CHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcc---cccccCCCccEEEECC
Confidence            7889999998 554 88888888874 7999999554 3444433    221122222211   1111235799999766


Q ss_pred             CCCcccccccccccccCCCceEEEec
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      .-...... +.+.++  ++|+++...
T Consensus       143 ~~~~~~~~-~~~~L~--pgG~l~~~~  165 (231)
T 1vbf_A          143 TAPTLLCK-PYEQLK--EGGIMILPI  165 (231)
T ss_dssp             BBSSCCHH-HHHTEE--EEEEEEEEE
T ss_pred             cHHHHHHH-HHHHcC--CCcEEEEEE
Confidence            54443332 277889  999998763

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=92.68  E-value=0.37  Score=43.68  Aligned_cols=88  Identities=15%  Similarity=0.246  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .+.+|.|.| .|.+|..+++.++..|.+|++.+++ ++.+.+.+.|...+      ++.+.+.   ..|+|+.++.....
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~---~aDvVi~~vp~~~~  223 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------STPELAA---QSDFIVVACSLTPA  223 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHH---HCSEEEECCCCCTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------CHHHHHh---hCCEEEEeCCCChH
Confidence            467999999 8999999999999999999999854 34444555554321      2222222   48999999876422


Q ss_pred             -ccc---ccccccccCCCceEEEec
Q psy9949         267 -QIN---SYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 -~~~---~~~~~l~~~~~G~~v~~~  287 (383)
                       ...   ..++.++  ++..++.++
T Consensus       224 t~~~i~~~~~~~mk--~gailIn~s  246 (330)
T 2gcg_A          224 TEGLCNKDFFQKMK--ETAVFINIS  246 (330)
T ss_dssp             TTTCBSHHHHHHSC--TTCEEEECS
T ss_pred             HHHhhCHHHHhcCC--CCcEEEECC
Confidence             111   1145666  777777764

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=92.51  E-value=0.36  Score=44.01  Aligned_cols=87  Identities=11%  Similarity=0.139  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      .|++|.|.| .|.+|..+++.++.+|.+|++.++.. ..+...  +...+     .++.+-+   ...|+|+-++.....
T Consensus       172 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~-----~~l~ell---~~sDvV~l~~Plt~~  240 (345)
T 4g2n_A          172 TGRRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYH-----DTLDSLL---GASDIFLIAAPGRPE  240 (345)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEEC-----SSHHHHH---HTCSEEEECSCCCGG
T ss_pred             CCCEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEe-----CCHHHHH---hhCCEEEEecCCCHH
Confidence            468999999 99999999999999999999998653 333222  43221     1233322   257899888774321


Q ss_pred             ----cccccccccccCCCceEEEec
Q psy9949         267 ----QINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       267 ----~~~~~~~~l~~~~~G~~v~~~  287 (383)
                          .....++.++  ++..+|.++
T Consensus       241 T~~li~~~~l~~mk--~gailIN~a  263 (345)
T 4g2n_A          241 LKGFLDHDRIAKIP--EGAVVINIS  263 (345)
T ss_dssp             GTTCBCHHHHHHSC--TTEEEEECS
T ss_pred             HHHHhCHHHHhhCC--CCcEEEECC
Confidence                1111256677  888888774

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=92.48  E-value=0.32  Score=43.31  Aligned_cols=95  Identities=13%  Similarity=0.118  Sum_probs=59.7

Q ss_pred             HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH----HhcCCC-e--eeeCCChHHHHHHh
Q psy9949         178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV----TSLNPN-L--VIDYNEPEAMHSIA  249 (383)
Q Consensus       178 ~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~----~~lg~~-~--v~~~~~~~~~~~i~  249 (383)
                      ....+    +++++||-.| +| .|..+..+++..|++|++++-+ +..+.+    ...|.. .  ++..+-.++     
T Consensus        66 ~~~~~----~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----  134 (302)
T 3hem_A           66 DKLNL----EPGMTLLDIG-CG-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----  134 (302)
T ss_dssp             HTTCC----CTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----
T ss_pred             HHcCC----CCcCEEEEee-cc-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----
Confidence            34555    8899999998 55 5899999999888999999954 434433    334432 2  222221221     


Q ss_pred             cCCCccEEEEcCCCCcc--------------cccccccccccCCCceEEEe
Q psy9949         250 GAGPYDVILDAAGIPLD--------------QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~~~--------------~~~~~~~~l~~~~~G~~v~~  286 (383)
                       .+.+|+|+....-...              ....+.++|+  |+|+++..
T Consensus       135 -~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk--pgG~l~i~  182 (302)
T 3hem_A          135 -DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP--DDGRMLLH  182 (302)
T ss_dssp             -CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC--TTCEEEEE
T ss_pred             -CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcC--CCcEEEEE
Confidence             3579999875332111              1112256888  99999875

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=92.47  E-value=0.15  Score=45.93  Aligned_cols=88  Identities=14%  Similarity=0.166  Sum_probs=56.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHH--CCCEEEEEecC--ch--HHHHHhcCCCeeeeCCChHHHHHHhcC---CCccEEEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKA--WDIEVVTTCSG--DA--KDLVTSLNPNLVIDYNEPEAMHSIAGA---GPYDVILD  259 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~--~G~~Vi~~~~~--~~--~~~~~~lg~~~v~~~~~~~~~~~i~~~---~g~d~v~d  259 (383)
                      .-+|.|.| +|.+|...+..+..  .+.+++++++.  ++  +++++++|....  +  .++ +.+.+.   .++|+||+
T Consensus         4 ~irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--~--~~~-e~ll~~~~~~~iDvV~~   77 (312)
T 1nvm_B            4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--Y--AGV-EGLIKLPEFADIDFVFD   77 (312)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--S--SHH-HHHHHSGGGGGEEEEEE
T ss_pred             CCEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--c--CCH-HHHHhccCCCCCcEEEE
Confidence            35799999 89999988887743  46688777743  33  456677886422  1  122 333332   57999999


Q ss_pred             cCCCCcccccccccccccCC--CceEEE
Q psy9949         260 AAGIPLDQINSYLPFLKTGK--FSKFVT  285 (383)
Q Consensus       260 ~~g~~~~~~~~~~~~l~~~~--~G~~v~  285 (383)
                      |++.......+ ..+++  .  +.++++
T Consensus        78 atp~~~h~~~a-~~al~--a~~Gk~Vi~  102 (312)
T 1nvm_B           78 ATSASAHVQNE-ALLRQ--AKPGIRLID  102 (312)
T ss_dssp             CSCHHHHHHHH-HHHHH--HCTTCEEEE
T ss_pred             CCChHHHHHHH-HHHHH--hCCCCEEEE
Confidence            99965443332 55666  4  666655

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=92.44  E-value=0.44  Score=44.70  Aligned_cols=75  Identities=17%  Similarity=0.278  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeee-eCCChHHHHHHhc--CCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVI-DYNEPEAMHSIAG--AGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~-~~~~~~~~~~i~~--~~g~d~v~d~~g~  263 (383)
                      .+.+|+|.| .|.+|..+++.++..|.+|++++.+. +.+.+++.|...++ |..+.+   .+..  ...+|+++-+++.
T Consensus         3 ~~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~---~L~~agi~~A~~viv~~~~   78 (413)
T 3l9w_A            3 HGMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMD---LLESAGAAKAEVLINAIDD   78 (413)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHH---HHHHTTTTTCSEEEECCSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHH---HHHhcCCCccCEEEECCCC
Confidence            456799999 89999999999999999999999664 55777778865332 333333   2333  2479999999987


Q ss_pred             Ccc
Q psy9949         264 PLD  266 (383)
Q Consensus       264 ~~~  266 (383)
                      ...
T Consensus        79 ~~~   81 (413)
T 3l9w_A           79 PQT   81 (413)
T ss_dssp             HHH
T ss_pred             hHH
Confidence            643

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=92.42  E-value=0.059  Score=44.58  Aligned_cols=91  Identities=20%  Similarity=0.125  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC----------CEEEEEecCchHHHHHhcCCCeee---eCCChHHHHHHhc---
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD----------IEVVTTCSGDAKDLVTSLNPNLVI---DYNEPEAMHSIAG---  250 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G----------~~Vi~~~~~~~~~~~~~lg~~~v~---~~~~~~~~~~i~~---  250 (383)
                      +++++||..| +|. |..++.+++..|          .+|++++.++...    +.....+   |..+......+.+   
T Consensus        21 ~~~~~vLDlG-cG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~   94 (196)
T 2nyu_A           21 RPGLRVLDCG-AAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP----LEGATFLCPADVTDPRTSQRILEVLP   94 (196)
T ss_dssp             CTTCEEEEET-CCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC----CTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred             CCCCEEEEeC-CCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc----CCCCeEEEeccCCCHHHHHHHHHhcC
Confidence            7889999999 676 999999999876          7899999544211    1111222   1222222222221   


Q ss_pred             CCCccEEEE-----cCCCC------------cccccccccccccCCCceEEEe
Q psy9949         251 AGPYDVILD-----AAGIP------------LDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 ~~g~d~v~d-----~~g~~------------~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...+|+|+.     +++..            ..... +.++|+  ++|+++..
T Consensus        95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Lk--pgG~lv~~  144 (196)
T 2nyu_A           95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSV-TPDILQ--PGGTFLCK  144 (196)
T ss_dssp             GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEE--EEEEEEEE
T ss_pred             CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHH-HHHHhc--CCCEEEEE
Confidence            247999994     33332            11111 267889  99999875

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=92.41  E-value=0.34  Score=43.99  Aligned_cols=95  Identities=23%  Similarity=0.235  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc-hHHHHHh----cC-----------CCe--eeeCCChHHHH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD-AKDLVTS----LN-----------PNL--VIDYNEPEAMH  246 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~-~~~~~~~----lg-----------~~~--v~~~~~~~~~~  246 (383)
                      .++++||-.| +|. |..++.+++..|  .+|++++.++ ..+.+++    ++           .+.  +...+..+...
T Consensus       104 ~~g~~VLDiG-~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~  181 (336)
T 2b25_A          104 NPGDTVLEAG-SGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE  181 (336)
T ss_dssp             CTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred             CCCCEEEEeC-CCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence            8999999998 555 888888998766  5999999554 3343322    11           112  22222111110


Q ss_pred             HHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         247 SIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       247 ~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .+ ..+.+|+|+-....+......+.++|+  ++|+++..
T Consensus       182 ~~-~~~~fD~V~~~~~~~~~~l~~~~~~Lk--pgG~lv~~  218 (336)
T 2b25_A          182 DI-KSLTFDAVALDMLNPHVTLPVFYPHLK--HGGVCAVY  218 (336)
T ss_dssp             -------EEEEEECSSSTTTTHHHHGGGEE--EEEEEEEE
T ss_pred             cc-CCCCeeEEEECCCCHHHHHHHHHHhcC--CCcEEEEE
Confidence            11 123599999766555442333378899  99999876

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=92.38  E-value=0.11  Score=46.40  Aligned_cols=69  Identities=20%  Similarity=0.290  Sum_probs=41.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCc-hHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGD-AKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~-~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|.+|..+++.+...| .+++++ ++. ..+.+ ..+...+ .|..+..+.+.+   .++|+||.+++..
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~---~~~d~vih~a~~~   74 (313)
T 3ehe_A            3 LIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-NEAARLVKADLAADDIKDYL---KGAEEVWHIAANP   74 (313)
T ss_dssp             CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-CTTEEEECCCTTTSCCHHHH---TTCSEEEECCCCC
T ss_pred             EEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-CCCcEEEECcCChHHHHHHh---cCCCEEEECCCCC
Confidence            69999999999999999998888 555554 332 22221 1111111 233222222222   3799999998853

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=92.33  E-value=0.25  Score=45.55  Aligned_cols=91  Identities=18%  Similarity=0.250  Sum_probs=54.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQI  268 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~  268 (383)
                      -+|+|+| +|.+|..+++.+.. ..+|.+.+.+ ++.+.+++......+|..+.+....+  ..+.|+|++|++......
T Consensus        17 mkilvlG-aG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~--~~~~DvVi~~~p~~~~~~   92 (365)
T 3abi_A           17 MKVLILG-AGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEV--MKEFELVIGALPGFLGFK   92 (365)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHH--HTTCSEEEECCCGGGHHH
T ss_pred             cEEEEEC-CCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHH--HhCCCEEEEecCCcccch
Confidence            4699999 59999998887753 4577777754 34455544432223455443322221  247899999998653322


Q ss_pred             cccccccccCCCceEEEec
Q psy9949         269 NSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       269 ~~~~~~l~~~~~G~~v~~~  287 (383)
                      .+ -.|+.  .+-.++++.
T Consensus        93 v~-~~~~~--~g~~yvD~s  108 (365)
T 3abi_A           93 SI-KAAIK--SKVDMVDVS  108 (365)
T ss_dssp             HH-HHHHH--HTCEEEECC
T ss_pred             HH-HHHHh--cCcceEeee
Confidence            21 45666  566677653

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=92.33  E-value=0.17  Score=41.21  Aligned_cols=92  Identities=12%  Similarity=0.065  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHH----hcCC-Cee--eeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVT----SLNP-NLV--IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~----~lg~-~~v--~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .++++||-.| +|. |..+..+++.. .+|++++.++ ..+.++    ..+. +.+  ...   ++.+.+.....+|+|+
T Consensus        32 ~~~~~vldiG-~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~D~v~  105 (192)
T 1l3i_A           32 GKNDVAVDVG-CGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DAPEALCKIPDIDIAV  105 (192)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CHHHHHTTSCCEEEEE
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---CHHHhcccCCCCCEEE
Confidence            7889999998 555 88888888866 8999999544 334333    3444 222  222   2333333335799999


Q ss_pred             EcCCCCcc--cccccccccccCCCceEEEe
Q psy9949         259 DAAGIPLD--QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~g~~~~--~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ........  ....+.++++  ++|+++..
T Consensus       106 ~~~~~~~~~~~l~~~~~~l~--~gG~l~~~  133 (192)
T 1l3i_A          106 VGGSGGELQEILRIIKDKLK--PGGRIIVT  133 (192)
T ss_dssp             ESCCTTCHHHHHHHHHHTEE--EEEEEEEE
T ss_pred             ECCchHHHHHHHHHHHHhcC--CCcEEEEE
Confidence            65432221  1111256788  99998875

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=92.30  E-value=0.59  Score=42.73  Aligned_cols=89  Identities=11%  Similarity=0.057  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLK-AWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~-~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .|.+|.|.| .|.+|..+++.++ ..|.+|++.+++. +.+.+.++|...+   .  ++.+.+.   ..|+|+.++....
T Consensus       162 ~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~--~l~ell~---~aDvVil~vp~~~  232 (348)
T 2w2k_A          162 RGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV---D--SLEELAR---RSDCVSVSVPYMK  232 (348)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC---S--SHHHHHH---HCSEEEECCCCSG
T ss_pred             CCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe---C--CHHHHhc---cCCEEEEeCCCCh
Confidence            578999999 8999999999999 9999999988653 4444555565321   1  2222222   4799999887643


Q ss_pred             c-ccc---ccccccccCCCceEEEec
Q psy9949         266 D-QIN---SYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 ~-~~~---~~~~~l~~~~~G~~v~~~  287 (383)
                      . ...   ..++.++  ++..++.++
T Consensus       233 ~t~~li~~~~l~~mk--~gailin~s  256 (348)
T 2w2k_A          233 LTHHLIDEAFFAAMK--PGSRIVNTA  256 (348)
T ss_dssp             GGTTCBCHHHHHHSC--TTEEEEECS
T ss_pred             HHHHHhhHHHHhcCC--CCCEEEECC
Confidence            1 111   1145667  777777764

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=92.18  E-value=0.33  Score=42.72  Aligned_cols=87  Identities=15%  Similarity=0.204  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ..+++++|.| +|+.|.+++..+...|+ +|+++.++. + .+++++++.+ . ...   .     ....+|+||++++.
T Consensus       117 ~~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~~~---~-----~~~~~DivInaTp~  185 (271)
T 1npy_A          117 NKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-INS---L-----ENQQADILVNVTSI  185 (271)
T ss_dssp             CTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-ESC---C-----TTCCCSEEEECSST
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-chh---h-----hcccCCEEEECCCC
Confidence            4567899999 89999999988888998 788888763 3 3566666642 1 111   0     02469999999986


Q ss_pred             Ccccc-----ccc-ccccccCCCceEEEe
Q psy9949         264 PLDQI-----NSY-LPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ~~~~~-----~~~-~~~l~~~~~G~~v~~  286 (383)
                      .....     ..+ ..++.  ++..++++
T Consensus       186 gm~~~~~~~~~~~~~~~l~--~~~~v~Dl  212 (271)
T 1npy_A          186 GMKGGKEEMDLAFPKAFID--NASVAFDV  212 (271)
T ss_dssp             TCTTSTTTTSCSSCHHHHH--HCSEEEEC
T ss_pred             CccCccccCCCCCCHHHcC--CCCEEEEe
Confidence            54211     100 23555  56666665

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=92.08  E-value=1.1  Score=41.09  Aligned_cols=138  Identities=12%  Similarity=0.028  Sum_probs=75.6

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHCCCEEEEEecCc--h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         190 KRVLVLGASGGVGT-MAVQLLKAWDIEVVTTCSGD--A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       190 ~~VlI~ga~g~vG~-~ai~la~~~G~~Vi~~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      -+|.|.| +|.++. ..+..++..+++++++++..  + .++++++|...++  .  ++ +.+.+...+|+|+.|+....
T Consensus        27 irvgiiG-~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~--~--~~-~~ll~~~~vD~V~I~tp~~~  100 (361)
T 3u3x_A           27 LRFAAVG-LNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRI--A--TA-EEILEDENIGLIVSAAVSSE  100 (361)
T ss_dssp             CEEEEEC-CCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEE--S--CH-HHHHTCTTCCEEEECCCHHH
T ss_pred             cEEEEEC-cCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCccc--C--CH-HHHhcCCCCCEEEEeCChHH
Confidence            4799999 777774 34455556788999998543  2 3466778754443  2  22 23444457999998887654


Q ss_pred             ccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCC-HHHHHHHHHH
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPI-PYAVKEINKF  344 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l  344 (383)
                      -.... ..++.   .|+-|.+..|...+       ......-....        .-.|..+..++.... ...+..+.++
T Consensus       101 H~~~~-~~al~---aGkhVl~EKPla~~-------~~ea~~l~~~a--------~~~g~~l~v~~~~R~~~p~~~~~k~~  161 (361)
T 3u3x_A          101 RAELA-IRAMQ---HGKDVLVDKPGMTS-------FDQLAKLRRVQ--------AETGRIFSILYSEHFESPATVKAGEL  161 (361)
T ss_dssp             HHHHH-HHHHH---TTCEEEEESCSCSS-------HHHHHHHHHHH--------HTTCCCEEEECHHHHTCHHHHHHHHH
T ss_pred             HHHHH-HHHHH---CCCeEEEeCCCCCC-------HHHHHHHHHHH--------HHcCCEEEEechHhhCCHHHHHHHHH
Confidence            33331 45555   45667776554322       11111111111        112222222222222 2567888889


Q ss_pred             HHcCCccc
Q psy9949         345 IERGQIKP  352 (383)
Q Consensus       345 ~~~g~l~~  352 (383)
                      +++|.|-.
T Consensus       162 i~~g~iG~  169 (361)
T 3u3x_A          162 VAAGAIGE  169 (361)
T ss_dssp             HHTTTTSS
T ss_pred             HHcCCCCC
Confidence            99988744

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=92.01  E-value=0.29  Score=43.51  Aligned_cols=34  Identities=26%  Similarity=0.470  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~  222 (383)
                      ...+|+|.| +|++|..++..+...|. ++..++.+
T Consensus        35 ~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D   69 (292)
T 3h8v_A           35 RTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYD   69 (292)
T ss_dssp             GGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             hCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            456899999 89999999998888898 78777743

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=92.00  E-value=2.1  Score=38.81  Aligned_cols=90  Identities=21%  Similarity=0.293  Sum_probs=55.9

Q ss_pred             EEEEEcCCchHHHHHHHHHH-H-CCCEEEEEecCc--hH-HHHHhcCC-CeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLK-A-WDIEVVTTCSGD--AK-DLVTSLNP-NLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~-~-~G~~Vi~~~~~~--~~-~~~~~lg~-~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|.|.| +|.+|...+..++ . -+++++++++..  +. ++++++|. ..++  .+  +. .+.+...+|+|+.|+...
T Consensus         4 rigiIG-~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~--~~--~~-~ll~~~~~D~V~i~tp~~   77 (344)
T 3mz0_A            4 RIGVIG-TGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVY--PN--DD-SLLADENVDAVLVTSWGP   77 (344)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEE--SS--HH-HHHHCTTCCEEEECSCGG
T ss_pred             EEEEEC-ccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeee--CC--HH-HHhcCCCCCEEEECCCch
Confidence            689999 7999987777666 4 367888887443  22 45567774 3333  22  22 333345799999999776


Q ss_pred             cccccccccccccCCCceEEEecCCC
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      ...... ..++.   .|+-|.+..|.
T Consensus        78 ~h~~~~-~~al~---~Gk~vl~EKP~   99 (344)
T 3mz0_A           78 AHESSV-LKAIK---AQKYVFCEKPL   99 (344)
T ss_dssp             GHHHHH-HHHHH---TTCEEEECSCS
T ss_pred             hHHHHH-HHHHH---CCCcEEEcCCC
Confidence            543332 45555   45556665543

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=91.96  E-value=0.43  Score=40.35  Aligned_cols=96  Identities=23%  Similarity=0.187  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCc-hHHHHH----hcCC-C--eeeeCCChHHHHHHhcC---CC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGD-AKDLVT----SLNP-N--LVIDYNEPEAMHSIAGA---GP  253 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~-~~~~~~----~lg~-~--~v~~~~~~~~~~~i~~~---~g  253 (383)
                      .++++||-.| +| .|..++.+++..  +.+|++++.++ ..+.++    ..|. +  .++..+..+....+...   ..
T Consensus        68 ~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~  145 (229)
T 2avd_A           68 IQAKKALDLG-TF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT  145 (229)
T ss_dssp             TTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred             cCCCEEEEEc-CC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence            6778999998 44 889999999976  46999999544 334333    3453 2  22333222232333222   57


Q ss_pred             ccEEEEcCCCCc--ccccccccccccCCCceEEEe
Q psy9949         254 YDVILDAAGIPL--DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       254 ~d~v~d~~g~~~--~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +|+|+-......  .....+.++++  ++|.++..
T Consensus       146 ~D~v~~d~~~~~~~~~l~~~~~~L~--pgG~lv~~  178 (229)
T 2avd_A          146 FDVAVVDADKENCSAYYERCLQLLR--PGGILAVL  178 (229)
T ss_dssp             EEEEEECSCSTTHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcC--CCeEEEEE
Confidence            999886544321  11111267889  99999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	383
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	1e-14
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	5e-12
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	2e-11
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	2e-11
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-11
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	2e-10
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	6e-10
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	9e-10
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-09
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	1e-08
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	1e-08
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	3e-08
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	8e-08
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	9e-08
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	9e-08
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-07
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-07
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	2e-07
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	3e-07
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	5e-07
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-06
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	3e-06
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	4e-06
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	6e-06
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	6e-06
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	8e-06
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-05
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	5e-05
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	5e-05
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	9e-05
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	1e-04
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-04
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-04
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	4e-04
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	0.001
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	0.003
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	0.004

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 69.1 bits (168), Expect = 1e-14
 Identities = 27/185 (14%), Positives = 45/185 (24%), Gaps = 23/185 (12%)

Query: 24  STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLN 83
           ST   A Q         +     + T  L    VL+++    +N  D       GN    
Sbjct: 1   STLFQALQAEKNADDVSVHVKT-ISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN---- 55

Query: 84  SLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLI 143
                      P++      G                +         +   + G  S+  
Sbjct: 56  ------IVREYPLILGIDAAGTVVSSNDPRFAEGDEVI----ATSYELGVSRDGGLSEYA 105

Query: 144 LADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGT 203
                 +   P N+S +EA       +                   K +L     G V  
Sbjct: 106 SVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGA-----LKDILQNRIQGRV-- 158

Query: 204 MAVQL 208
             V+L
Sbjct: 159 -IVKL 162

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 61.0 bits (147), Expect = 5e-12
 Identities = 27/171 (15%), Positives = 45/171 (26%), Gaps = 27/171 (15%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A+ ++             +    L   DVLV +   SVN  D                  
Sbjct: 6   AFVVNKTETEFTAGVQT-ISMDDLPEGDVLVRVHYSSVNYKDGLAS-------------- 50

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHK---QGSFSKLILA 145
                + V  +P   G D  G +V+           D V            G +S+    
Sbjct: 51  -IPDGKIVKTYPFVPGIDLAGVVVSSQH--PRFREGDEVIATGYEIGVTHFGGYSEYARL 107

Query: 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG 196
               +   P  + +  A  +    L       +   L     R + V+ L 
Sbjct: 108 HGEWLVPLPKGL-ERIAQEISLAELPQALKRILRGEL-----RGRTVVRLA 152

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 60.4 bits (145), Expect = 2e-11
 Identities = 19/119 (15%), Positives = 36/119 (30%), Gaps = 16/119 (13%)

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV 216
           ++  + A +    LTA+  L     L    P     +  G +  VG  A Q+ K  +   
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLT---PGKDWFIQNGGTSAVGKYASQIGKLLNFNS 57

Query: 217 VTTCSGDAK-----DLVTSLNPNLVIDYNEPEAMHSI--------AGAGPYDVILDAAG 262
           ++              +  L    VI  ++  +               G   + L+  G
Sbjct: 58  ISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG 116

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (142), Expect = 2e-11
 Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 34/180 (18%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A ++  +GG + L+   ++  PI K   VL+++ A  VNP++  +  G  +         
Sbjct: 5   AVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPL----- 59

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
                      P T G D  G I A G   +     D V+        G +++  LA   
Sbjct: 60  ----------LPYTPGSDVAGVIEAVGDNASAFKKGDRVF--TSSTISGGYAEYALAADH 107

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQL 208
            V+K P  +     +      +                      ++ G+ G  G M + L
Sbjct: 108 TVYKLPEKLKPVIGSQYPLEKVAEAHE----------------NIIHGS-GATGKMILLL 150

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 59.5 bits (143), Expect = 3e-11
 Identities = 35/192 (18%), Positives = 56/192 (29%), Gaps = 49/192 (25%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  + +YG    ++    VK P+     VLV+++A  V   D+    G   V        
Sbjct: 8   AAVVHAYGAPLRIE---EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPP----- 59

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGS---------- 138
                      P   G +  G + A G  VT +   D V         G           
Sbjct: 60  ----------LPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWET 109

Query: 139 ---------------FSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183
                          +++ +LAD   V   P N+      G L         ++     G
Sbjct: 110 LCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMRAGQIEG 169

Query: 184 LVYPRDKRVLVL 195
                 + VL +
Sbjct: 170 ------RIVLEM 175

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 24/160 (15%), Positives = 42/160 (26%), Gaps = 21/160 (13%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +    G         +    L   DV V++   S+N  D   + G G ++ N     
Sbjct: 3   ALLLEQQDGKTLASVQT-LDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRN----- 56

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQ---GSFSKLILA 145
                     FP+  G DF G +          +    V        +   G  ++    
Sbjct: 57  ----------FPMIPGIDFAGTVRT--SEDPRFHAGQEVLLTGWGVGENHWGGLAEQARV 104

Query: 146 DSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV 185
               +   P   + +E +                    LV
Sbjct: 105 KGDWLVAMPQGQAAKEISLSEAPNFAEAIINNQIQGRTLV 144

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 54.8 bits (131), Expect = 6e-10
 Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 38/167 (22%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           AW +   GG  EL    ++  P  +  +V++ ++AV +N  D  M  G     L+     
Sbjct: 3   AWVLKRLGGPLELV---DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIP 59

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSA 148
               V                           +        +     QG  ++ +     
Sbjct: 60  GMEVV--------------------------GVVEGRRYAAL---VPQGGLAERVAVPKG 90

Query: 149 LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL 195
            +   P                 A+ AL      G      K V+ L
Sbjct: 91  ALLPLPEGRPVVGPVFPFAEAEAAFRALLDRGHTG------KVVVRL 131

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 52.6 bits (126), Expect = 9e-10
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV 216
           +   +A  +   G TA   +      G+  P+D  ++V GASGGVG+ AV LL     +V
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGV-RPQDGEIVVTGASGGVGSTAVALLHKLGYQV 59

Query: 217 VTTCSGDAK-DLVTSL 231
           V     ++  + + SL
Sbjct: 60  VAVSGRESTHEYLKSL 75

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 54.6 bits (130), Expect = 1e-09
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 11/135 (8%)

Query: 169 GLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDAKDL 227
           G TA  ++      GL  P    VLV GA+GGVG +AV +L       V +T + +A D 
Sbjct: 5   GFTAALSVHRLEQNGLS-PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY 63

Query: 228 VTSLNPNLVIDYNEP--EAMHSIAGAGPYDVILDAAGIPLDQINS-------YLPFLKTG 278
           +  L  + VI   +     + +++       +    G  L  + S             TG
Sbjct: 64  LKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTG 123

Query: 279 KFSKFVTLRSPFLKN 293
                 T+    L+ 
Sbjct: 124 GGEVPATVYPFILRG 138

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 52.1 bits (123), Expect = 1e-08
 Identities = 29/182 (15%), Positives = 53/182 (29%), Gaps = 16/182 (8%)

Query: 29  AWQISSYGG-ADELQF-NDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLR 86
           A   + +G   D L   +  +    L   +V+V+     VNP D+  + G          
Sbjct: 6   AVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS------ 59

Query: 87  QLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILAD 146
           +    +     E     G +   +++  G  V+ L   D V              L   D
Sbjct: 60  KPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDD 119

Query: 147 SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG-ASGGVGTMA 205
             +          +  A     GLT   +++         P    +   G A+   G   
Sbjct: 120 DFI----KLPNPAQSKANGKPNGLTDAKSIETL--YDGTKPLH-ELYQDGVANSKDGKQL 172

Query: 206 VQ 207
           + 
Sbjct: 173 IT 174

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 52.2 bits (124), Expect = 1e-08
 Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV 216
           ++ +EA  +   G TA  ++      GL  P    VLV GA+GGVG++AV +L      V
Sbjct: 1   LTLKEAMAIGTAGFTAALSIHRLEEHGLT-PERGPVLVTGATGGVGSLAVSMLAKRGYTV 59

Query: 217 VTTCSG-DAKDLVTSLNPNLVIDYNE-PEAMHSIAGAGPYDVILDAAGIPLDQIN----- 269
             +       D +  L    V+   +             +   +D  G            
Sbjct: 60  EASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMR 119

Query: 270 ---SYLPFLKTGKFSKFVTLRSPFLKNTDSLG 298
              +      TG      T+    L+    LG
Sbjct: 120 YGGAVAVSGLTGGAEVPTTVHPFILRGVSLLG 151

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 50.8 bits (120), Expect = 3e-08
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 10/126 (7%)

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEV 216
           IS E+AA     GLT +  L+ T  +      D++ L   A+GGVG +A Q  KA   ++
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIK----PDEQFLFHAAAGGVGLIACQWAKALGAKL 56

Query: 217 VTTCSGD-AKDLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGIPLDQINSYL 272
           + T                 VI+Y E    E +  I G     V+ D+  +  D     L
Sbjct: 57  IGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDS--VGRDTWERSL 114

Query: 273 PFLKTG 278
             L+  
Sbjct: 115 DCLQRR 120

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.7 bits (117), Expect = 8e-08
 Identities = 39/200 (19%), Positives = 67/200 (33%), Gaps = 26/200 (13%)

Query: 160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT 219
            EAA      LTAW +L     L       +RVL+  A+GGVG  AV + K     + TT
Sbjct: 1   NEAATFGVAYLTAWHSLCEVGRLS----PGERVLIHSATGGVGMAAVSIAKMIGARIYTT 56

Query: 220 CSGDAKDLVTSLNPNLVIDYNEPE-----AMHSIAGAGPYDVILDAAGIPLDQINSYLPF 274
              DAK  + S      +  +         +    G G   V+   AG  + +       
Sbjct: 57  AGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGV---QI 113

Query: 275 LKTGKFSKFVTLRSPFLKNTDSLG-LVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP 333
           L  G     +  +  +   +  L  L      +  DL  +        +           
Sbjct: 114 LAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQ---------- 163

Query: 334 IPYAVKEINKFIERGQIKPV 353
               ++ I + +  G+++ +
Sbjct: 164 ---LLQHILQHVADGKLEVL 180

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.8 bits (118), Expect = 9e-08
 Identities = 29/205 (14%), Positives = 53/205 (25%), Gaps = 55/205 (26%)

Query: 23  YSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVL 82
           Y  +     I S+      +             D+ ++++A  V   D+    G+     
Sbjct: 3   YPEKFEGIAIQSHEDWKNPKKTK-YDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW---- 57

Query: 83  NSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP--------- 133
                         ++ PL +G +  GK+V  GP+           GV            
Sbjct: 58  ------------GNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDR 105

Query: 134 ------------------------HKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTG 169
                                     QG ++  +      V   P NI  E         
Sbjct: 106 CKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGV 165

Query: 170 LTAWSALQITAALGLVYPRDKRVLV 194
             A+  ++     G V  R   ++ 
Sbjct: 166 HEAFERME----KGDVRYRF-TLVG 185

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 9e-08
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 48/184 (26%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPV 96
           G  +L+  +    P     +VL+ M +V +   DV                        +
Sbjct: 15  GPGDLRLEN-YPIPEPGPNEVLLRMHSVGICGSDVHY-------------WEYGRIGNFI 60

Query: 97  LEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------ 132
           ++ P+ LG +  G +   G  V  L   D V                             
Sbjct: 61  VKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCA 120

Query: 133 -PHKQGSFSKLILADSALVHKKPSNISDEEAAGV-LYTGLTAWSALQITAALGLVYPRDK 190
            P   G+  +    ++A  +K P N+         L   L A+   +             
Sbjct: 121 TPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFETFKKGL--------GL 172

Query: 191 RVLV 194
           ++++
Sbjct: 173 KIML 176

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 49.2 bits (116), Expect = 1e-07
 Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 42/191 (21%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A ++   G    LQ    +  P  K   VL++++A  V   DV M  G            
Sbjct: 3   AVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGR--------FGN 51

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHK------------- 135
                +  ++ P+TLG +  GKI   G  V   +  D+V       +             
Sbjct: 52  LRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHL 111

Query: 136 -----------QGSFSKLILADSA-LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183
                       G++++ ++      ++K             L     A   L+   A+G
Sbjct: 112 CDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIG 171

Query: 184 LVYPRDKRVLV 194
                 ++VL+
Sbjct: 172 ------RQVLI 176

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 49.5 bits (117), Expect = 1e-07
 Identities = 20/202 (9%), Positives = 45/202 (22%), Gaps = 35/202 (17%)

Query: 35  YGGADELQFND------NVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           Y G+ +++                    V++++ + ++   D  M+ G     +  +   
Sbjct: 7   YLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGH 66

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVA------------KGPRVTDLNIDDVVYGVIQPHKQ 136
           E           +   +      V             +      L ++    G    +  
Sbjct: 67  EITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVD 126

Query: 137 GSFSKLILADSALV-------HKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRD 189
                   A+  LV        K P      E   +         +L             
Sbjct: 127 MGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDA---------P 177

Query: 190 KRVLVLGASGGVGTMAVQLLKA 211
           +      A G      +   K 
Sbjct: 178 RGYGEFDA-GVPKKFVIDPHKT 198

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 48.8 bits (115), Expect = 2e-07
 Identities = 24/188 (12%), Positives = 48/188 (25%), Gaps = 38/188 (20%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAM--------------- 73
           A      G   ELQ    +K    +  +VLV++ A  +   D+ +               
Sbjct: 6   AAVTPCKGADFELQ---ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGH 62

Query: 74  -----------------LGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDFCGKIVAKGP 116
                            +G +  +      +   C+           GR+F G       
Sbjct: 63  EGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNH 122

Query: 117 RVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSAL 176
            +   +   V           SF+   L+      K   +   ++            +A+
Sbjct: 123 ALCTHDQGVVNDHFFAQS---SFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAI 179

Query: 177 QITAALGL 184
                + L
Sbjct: 180 DSRKGITL 187

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (111), Expect = 3e-07
 Identities = 29/164 (17%), Positives = 48/164 (29%), Gaps = 22/164 (13%)

Query: 31  QISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLET 90
           +   +GG + LQ  +          ++ VE KA+ +N ID  +  G              
Sbjct: 5   EFHKHGGPEVLQAVE-FTPADPAENEIQVENKAIGINFIDTYIRSGLY------------ 51

Query: 91  CSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALV 150
               P    P  LG +  G +   G  V  +   D V          S    I+AD A +
Sbjct: 52  ----PPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAI 107

Query: 151 HKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLV 194
                 +   E              +  + A          +L+
Sbjct: 108 LPAAIKVDVAEQQKYPLKDAQRAHEILESRATQ-----GSSLLI 146

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 47.3 bits (111), Expect = 5e-07
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 18/173 (10%)

Query: 37  GADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML--GGYGNVVLNSLRQLETCSVE 94
             ++L+       P  K  +VL++M  V +   DV     G   + ++     +   +  
Sbjct: 9   KQNDLRLEQ-RPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASG 67

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGV----------IQPHKQGSFSKLIL 144
            V++    +     G  VA  P V          G             P   G+ ++  +
Sbjct: 68  TVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYV 127

Query: 145 ADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGA 197
             +   HK P N + ++     +       A +  A        D  + V+ +
Sbjct: 128 HAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFE-AARKK----ADNTIKVMIS 175

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAW-DIE 215
           +   +A  +   G TA   +      G+  P+D  ++V GASGGVG+ AV LL       
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVR-PQDGEIVVTGASGGVGSTAVALLHKLGYQV 59

Query: 216 VVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQI 268
           V  +      + + SL  + V+  +E      +        I       L ++
Sbjct: 60  VAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKV 112

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 3e-06
 Identities = 27/196 (13%), Positives = 52/196 (26%), Gaps = 65/196 (33%)

Query: 45  DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104
           + ++    K+ +V +++ A +V   D   L G                      FP+ LG
Sbjct: 22  EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG----------------CFPVILG 65

Query: 105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQPHK----------------------------- 135
               G + + G  VT L   D V  +  P                               
Sbjct: 66  HLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDG 125

Query: 136 ----------------QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQIT 179
                             +FS+  +     V K    I  +E      +      A ++ 
Sbjct: 126 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELM 185

Query: 180 AALGLVYPRDKRVLVL 195
            +   +    + V+ +
Sbjct: 186 HSGKSI----RTVVKI 197

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.6 bits (104), Expect = 4e-06
 Identities = 26/200 (13%), Positives = 61/200 (30%), Gaps = 29/200 (14%)

Query: 162 AAGVL-YTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLK---AWDIEVV 217
             G +   GLT+   +Q      +    ++ ++V GA+G  G++A Q+        +  +
Sbjct: 5   FLGAIGMPGLTSLIGVQEKG--HISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGI 62

Query: 218 TTCSGDAKDLVTSLNPNLVIDYNEP---EAMHSIAGAGPYDVILDAAGIPLDQINSYLPF 274
                    L + L  +  ++Y      E +      G      +  G   + + S +  
Sbjct: 63  CGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNE 122

Query: 275 LKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMP- 333
                 S  +        N D     P          +         +  T    F +  
Sbjct: 123 -----NSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE---------RNITRE-RFTVLN 167

Query: 334 ----IPYAVKEINKFIERGQ 349
                   + +++++ + G+
Sbjct: 168 YKDKFEPGILQLSQWFKEGK 187

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 44.2 bits (103), Expect = 6e-06
 Identities = 11/117 (9%), Positives = 32/117 (27%), Gaps = 9/117 (7%)

Query: 160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT 219
           E+   +     T + +    A +     +     V G  G   ++ +    A    ++  
Sbjct: 4   EKVCLIGCGFSTGYGSAVKVAKVT----QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGV 59

Query: 220 CSGDAK-DLVTSLNPNLVIDYNEPE----AMHSIAGAGPYDVILDAAGIPLDQINSY 271
                K      +     ++  + +     + +    G  D   +  G     + + 
Sbjct: 60  DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL 116

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 43.9 bits (102), Expect = 6e-06
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 21/178 (11%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSK-DVLVEMKAVSVNPIDVAMLGGYGNVVL--NSL 85
           A ++  Y     ++   +V  P L+ + DV+V +    V   D+ ++ G  + +L     
Sbjct: 2   AARLHEYNKPLRIE---DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLP 58

Query: 86  RQLETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSF------ 139
             L   +V  + E    +     G  V   P VTD        G     +   F      
Sbjct: 59  YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID 118

Query: 140 ---SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLV 194
              ++ +      V K P ++  E     L         L+    LG      + VL+
Sbjct: 119 GGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLG------RAVLI 170

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 43.9 bits (102), Expect = 8e-06
 Identities = 25/116 (21%), Positives = 35/116 (30%), Gaps = 9/116 (7%)

Query: 162 AAGVL-YTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC 220
           A G +   GLTA+  L     +       + VLV  A+G VG++  Q+ K    +VV   
Sbjct: 6   ALGTIGMPGLTAYFGLLEVCGVK----GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA 61

Query: 221 SG----DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYL 272
                      +           N  E     A    YD   D  G          
Sbjct: 62  GSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQ 117

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 14/110 (12%), Positives = 27/110 (24%), Gaps = 9/110 (8%)

Query: 160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT 219
           ++   +     T + A   TA L           V G  G    + +    A    ++  
Sbjct: 4   DKVCLLGCGISTGYGAAVNTAKLE----PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGV 59

Query: 220 CSGDAK-DLVTSLNPNLVIDYNEP----EAMHSIAGAGPYDVILDAAGIP 264
                K            I+  +     + +      G  D   +  G  
Sbjct: 60  DINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNV 109

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 41.4 bits (96), Expect = 5e-05
 Identities = 19/181 (10%), Positives = 45/181 (24%), Gaps = 35/181 (19%)

Query: 45  DNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG 104
           + ++  +  + ++ +++ A  V   D+  L    +        L       V      + 
Sbjct: 24  EEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFP-VVLGHEGAGIVESVGPGVT 82

Query: 105 RDFCGKIVAKGPRVTDLNIDDVVYG------------------------------VIQPH 134
               G+ V                                               V+Q  
Sbjct: 83  EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFL 142

Query: 135 KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLV 194
              +FS+  + +   V K   ++  +E         +   A+ +           + VL 
Sbjct: 143 GTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKC----IRTVLS 198

Query: 195 L 195
           L
Sbjct: 199 L 199

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 41.1 bits (95), Expect = 5e-05
 Identities = 33/193 (17%), Positives = 54/193 (27%), Gaps = 51/193 (26%)

Query: 29  AWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQL 88
           A  +  +    +++    V+ P +   +VLV +KA  V   D+                 
Sbjct: 3   AAVVEQFKEPLKIK---EVEKPTISYGEVLVRIKACGVCHTDLHA--------------- 44

Query: 89  ETCSVEPVLEFPLTLGRDFCGKIVAKGPRVTDLNIDDVVYG------------------- 129
                    + PL  G +  G +   GP VT L + D V                     
Sbjct: 45  AHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQET 104

Query: 130 ------VIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALG 183
                        G +++   A +  V K P N   E     L      +  +      G
Sbjct: 105 LCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP--LEKINEVFDRMLKGQING 162

Query: 184 LVYPRDKRVLVLG 196
                 + VL L 
Sbjct: 163 ------RVVLTLE 169

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 40.8 bits (94), Expect = 9e-05
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 9/149 (6%)

Query: 160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT 219
           +    +     T + A   TA +    P      V G         +    A    ++  
Sbjct: 4   DTVCLLGCGVSTGFGAAVNTAKVE---PGST-CAVFGLGAVGLAAVMGCHSAGAKRIIAV 59

Query: 220 CSGDAK-DLVTSLNPNLVIDYNEPE----AMHSIAGAGPYDVILDAAGIPLDQINSYLPF 274
                K +          ++ N+       + S    G  D  L+  G      N+    
Sbjct: 60  DLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESC 119

Query: 275 LKTGKFSKFVTLRSPFLKNTDSLGLVPGL 303
           LK    S  V         T  + L+ G 
Sbjct: 120 LKGWGVSVLVGWTDLHDVATRPIQLIAGR 148

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 25/189 (13%), Positives = 54/189 (28%), Gaps = 32/189 (16%)

Query: 35  YGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVE 94
             G ++L + +  + P+  S D +V   AVS    D+      G +       L   +V 
Sbjct: 6   MLGINKLGWIE-KERPVAGSYDAIVRPLAVSPCTSDIHT-VFEGALGDRKNMILGHEAVG 63

Query: 95  PVLEFPLTLGRDFCGKIVAKGPRV------------TDLNIDDVVYGVIQPHKQGSFSKL 142
            V+E    +     G  V                     +   +        K G F + 
Sbjct: 64  EVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEY 123

Query: 143 ILADSA--LVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGG 200
              + A   +   P ++   +    +Y G                   ++ +L++     
Sbjct: 124 FHVNDADMNLAILPKDVDLSKLVTHVYHGFDHI---------------EEALLLMKD-KP 167

Query: 201 VGTMAVQLL 209
              +   ++
Sbjct: 168 KDLIKAVVI 176

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 157 ISDE---EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD 213
           IS E   E A +   G+TA+ A++  A            + +   GG+G +AVQLLK   
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAART----LYPGAYVAIVGVGGLGHIAVQLLKVMT 56

Query: 214 IEVVTTCSGDAKDLVTSLNPNLV--IDYNE--PEAMHSIAGAGPYDVILDAAGIPLDQIN 269
              V       + L  +        +D      + +  +      +V +D  G       
Sbjct: 57  PATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDY 116

Query: 270 S 270
           +
Sbjct: 117 T 117

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 35/196 (17%), Positives = 63/196 (32%), Gaps = 29/196 (14%)

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD-IE 215
           I    AA +L  GLT +S L      G      K+V ++G  GG+G+M   + KA     
Sbjct: 1   IPSHLAAPLLCGGLTVYSPLV-RNGCG----PGKKVGIVGL-GGIGSMGTLISKAMGAET 54

Query: 216 VVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFL 275
            V + S   ++    +  +  I   E              +++ A+ +     N     +
Sbjct: 55  YVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAM 114

Query: 276 KTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIP 335
           K     + V++  P      SL                        K  +I     +   
Sbjct: 115 K--VGGRIVSISIPEQHEMLSLKPY-------------------GLKAVSIS-YSALGSI 152

Query: 336 YAVKEINKFIERGQIK 351
             + ++ K +    IK
Sbjct: 153 KELNQLLKLVSEKDIK 168

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 8/119 (6%)

Query: 160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTT 219
              A +L  G+T +S L+     G      K+V V+G  G                V  T
Sbjct: 7   AAVAPLLCAGITTYSPLR-HWQAG----PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 61

Query: 220 CSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTG 278
            S   ++   +L  + V++          A    +D IL+    P   ++ +   LK  
Sbjct: 62  TSEAKREAAKALGADEVVNSRNA--DEMAAHLKSFDFILNTVAAP-HNLDDFTTLLKRD 117

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 30/188 (15%)

Query: 24  STRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAML-GGYGNVVL 82
             +  A  +  +      +     +   +    +LVE+ +  V   DV M  G    V L
Sbjct: 2   GLKAHAMVLEKFNQPLVYK---EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPL 58

Query: 83  NSLRQLETCSVE-----PVLEFPLTLGRDFCGKIVAKGPRVTD-----------LNIDDV 126
             +   E             +    L +     +  +G    +           L  +  
Sbjct: 59  PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 118

Query: 127 VYGV-----IQPHKQGSFSKLILADSA-LVHKKPSNISDEEAAGVLYTGLTAWSALQITA 180
           VYG+       PH +G +S  I+ D    V K    I+       L     A   ++   
Sbjct: 119 VYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRLP---LKEANKALELMESRE 175

Query: 181 ALG-LVYP 187
           AL  ++YP
Sbjct: 176 ALKVILYP 183

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 157 ISDEEAAGVLYTGLTAWSALQ 177
           +S EEAA    + LTA+ AL+
Sbjct: 1   LSPEEAAAFPVSFLTAYLALK 21

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 35.5 bits (80), Expect = 0.004
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 5/48 (10%)

Query: 157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTM 204
           ++  EAA +  +G+T + A++  +         K +LV+GA GG+GTM
Sbjct: 1   LNAVEAAPLTCSGITTYRAVRKASL-----DPTKTLLVVGAGGGLGTM 43

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	383
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.88
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.88
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.87
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.87
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.86
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.86
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.86
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.86
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.85
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.85
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.85
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.85
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.84
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.83
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.83
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.83
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.82
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.82
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.81
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.81
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.8
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.79
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.78
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.77
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.73
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.72
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.72
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.66
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.53
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.64
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.63
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.6
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.6
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.54
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.46
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.44
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.43
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.4
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.37
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.34
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.33
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.31
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.31
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.3
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.29
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.28
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.25
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.23
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.22
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.21
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.2
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.17
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.16
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.12
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.12
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.11
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.11
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.09
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.05
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.03
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.03
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.02
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.99
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.99
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.98
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.97
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.94
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.9
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.9
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.88
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	96.87
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.87
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.86
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.86
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.82
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.82
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.81
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.78
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.75
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.63
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.62
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.6
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.6
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.47
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.44
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.41
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.41
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.38
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.35
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.33
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	96.3
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.29
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.23
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.19
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.97
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	95.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.9
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.9
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.88
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.88
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.73
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.66
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.66
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.63
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.48
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.38
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.16
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	95.11
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.09
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	94.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	94.73
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.73
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	94.64
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	94.6
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	94.47
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.43
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.34
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.33
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.28
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	94.26
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.24
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.17
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.13
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.12
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.11
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	94.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.95
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.91
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	93.75
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	93.74
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.71
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	93.69
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	93.63
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	93.54
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	93.49
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.47
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.41
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	93.17
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.15
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.03
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	92.88
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	92.86
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.74
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	92.68
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.58
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.56
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	92.47
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	92.4
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.38
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.92
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.91
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.85
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.82
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.63
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.56
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.52
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.37
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.28
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	91.19
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.94
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	90.92
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	90.88
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.85
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	90.77
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.72
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.65
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	90.42
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	90.4
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	90.29
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	90.16
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.14
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.58
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.53
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	89.31
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.28
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.23
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	89.05
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	88.9
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	88.88
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	88.74
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.42
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	88.34
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.26
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.25
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	88.14
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	88.08
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	88.08
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	88.03
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.03
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	87.93
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	87.84
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	87.8
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.74
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	87.52
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	87.22
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	87.11
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	87.03
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	86.98
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	86.81
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	86.71
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	86.7
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.49
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	86.36
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	85.89
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.86
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	85.64
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	85.6
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	85.59
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	85.49
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.47
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	85.45
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	85.2
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.04
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	84.95
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	84.75
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	84.58
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.4
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	84.35
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	84.26
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	84.22
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	83.93
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	83.53
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	83.52
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.46
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	83.46
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	83.33
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.33
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	83.27
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	83.18
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.08
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.01
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	82.98
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	82.69
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.44
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	82.04
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.88
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	81.76
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.48
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	81.41
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	81.28
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	81.24
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	81.21
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	81.18
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.04
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	80.74
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	80.7
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	80.55
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	80.44
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.29
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	80.21

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=218.03  Aligned_cols=149  Identities=23%  Similarity=0.337  Sum_probs=135.7

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      .|||+++++.|+|+.|+++++.+.|+|++|||||||.++|||++|++.++|..+               ....+|.++||
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~---------------~~~~~p~i~G~   66 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS---------------RKPLLPYTPGS   66 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSS---------------CCCCSSBCCCS
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcC---------------ccccccccCcc
Confidence            599999999999999998757899999999999999999999999999988621               33567899999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCcc
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLV  185 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~  185 (383)
                      |++|+|+++|+++++|++||||++...  .+|+|+||++++.++++++|+++++++||+++++++|||+++...+..   
T Consensus        67 e~~G~V~~vG~~v~~~~vGdrV~~~~~--~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~---  141 (150)
T d1yb5a1          67 DVAGVIEAVGDNASAFKKGDRVFTSST--ISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSG---  141 (150)
T ss_dssp             CEEEEEEEECTTCTTCCTTCEEEESCC--SSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSC---
T ss_pred             ceeeeeEeecceeeccccCcccccccc--ccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCc---
Confidence            999999999999999999999988753  469999999999999999999999999999999999999999888887   


Q ss_pred             CCCCCEEEEE
Q psy9949         186 YPRDKRVLVL  195 (383)
Q Consensus       186 ~~~~~~VlI~  195 (383)
                       ..|+++||+
T Consensus       142 -~~G~~vliL  150 (150)
T d1yb5a1         142 -ATGKMILLL  150 (150)
T ss_dssp             -CSSEEEEEC
T ss_pred             -ccCCEEEEC
Confidence             899999874

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=4.8e-30  Score=214.36  Aligned_cols=150  Identities=23%  Similarity=0.268  Sum_probs=130.1

Q ss_pred             CcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          22 KYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        22 ~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      ++|++|||++++++|++  |+++ +++.|+|++|||||||.++|||++|++.++|..+               ....+|.
T Consensus         1 ~~P~tMkA~v~~~~g~p--l~l~-evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~---------------~~~~~P~   62 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP--LRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP---------------VKPPLPF   62 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSS---------------SCCCSSB
T ss_pred             CcchhcEEEEEEeCCCC--CEEE-EeECCCCCCCEEEEEEEEecCcccchhhhccCcc---------------ccccCCc
Confidence            46899999999999876  7888 8999999999999999999999999999998621               2356799


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEee-------------------------cCCCCCCceEEEeecCcccccCCCC
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVI-------------------------QPHKQGSFSKLILADSALVHKKPSN  156 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~g~~a~~~~v~~~~~~~ip~~  156 (383)
                      ++|||++|+|+++|+++++|++||||+...                         +...+|+|+||+++++++++++|++
T Consensus        63 i~GhE~~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~  142 (175)
T d1llua1          63 IPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKN  142 (175)
T ss_dssp             CCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTT
T ss_pred             CCCCcceEEEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCC
Confidence            999999999999999999999999997531                         1234589999999999999999999


Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEE
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL  195 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~  195 (383)
                      ++++.++++..++.|+++.++ .+.     .+|++|||+
T Consensus       143 l~~~~a~~~~~~~~t~~~~~~-~g~-----~~G~~VLVl  175 (175)
T d1llua1         143 VKATIHPGKLDDINQILDQMR-AGQ-----IEGRIVLEM  175 (175)
T ss_dssp             CCCCEEEECGGGHHHHHHHHH-TTC-----CSSEEEEEC
T ss_pred             CChhHHHHHHhHHHHHHHHHH-hCC-----CCCCEEEeC
Confidence            999888888888889998885 443     579999984

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=5.8e-30  Score=215.71  Aligned_cols=154  Identities=17%  Similarity=0.203  Sum_probs=131.9

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      |++|.+|||+.+.++++...+++. +++.++++|+||||||.++|||++|++.+.|.                .....+|
T Consensus         1 m~~P~~~ka~~~~~~~~~~~~~~~-~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~----------------~~~~~~P   63 (192)
T d1piwa1           1 MSYPEKFEGIAIQSHEDWKNPKKT-KYDPKPFYDHDIDIKIEACGVCGSDIHCAAGH----------------WGNMKMP   63 (192)
T ss_dssp             CCTTTCEEEEEECCSSSTTSCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTT----------------TSCCCSS
T ss_pred             CCCCceeEEEEEeCCCcCCcceEe-eccCCCCCCCeEEEEEeeeCCCcchHHHHcCC----------------CCCCCCC
Confidence            678999999999999988888888 67777789999999999999999999999886                2345789


Q ss_pred             ccccCceeEEEEecCCCC-CCCCCCCEEEEee--------------------------------cCCCCCCceEEEeecC
Q psy9949         101 LTLGRDFCGKIVAKGPRV-TDLNIDDVVYGVI--------------------------------QPHKQGSFSKLILADS  147 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~--------------------------------~~~~~g~~a~~~~v~~  147 (383)
                      +++|||++|+|+++|+++ +.+++||||....                                +...+|+|+||+++++
T Consensus        64 ~i~GHE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~  143 (192)
T d1piwa1          64 LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHE  143 (192)
T ss_dssp             EECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEG
T ss_pred             cCcccccccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeeh
Confidence            999999999999999988 5699999995321                                1234699999999999


Q ss_pred             cccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEc
Q psy9949         148 ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG  196 (383)
Q Consensus       148 ~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~g  196 (383)
                      ++++++|+++++++|+.+.+.+.|||+++. .+++    +++++|++..
T Consensus       144 ~~~~~iP~~l~~e~Aal~~~~~~ta~~~l~-~~~v----k~g~~Vvv~~  187 (192)
T d1piwa1         144 HFVVPIPENIWVETLPVGEAGVHEAFERME-KGDV----RYRFTLVGYD  187 (192)
T ss_dssp             GGEEECCTTCCEEEEESSHHHHHHHHHHHH-HTCC----SSEEEEECCH
T ss_pred             HHeEECCCCCCHHHHHHHHHHHHHHHHHHH-HhCC----CCCCEEEEEC
Confidence            999999999999887766656779999996 7888    9999999863

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=1.2e-29  Score=215.88  Aligned_cols=152  Identities=16%  Similarity=0.161  Sum_probs=134.3

Q ss_pred             CCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCC
Q psy9949          21 LKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFP  100 (383)
Q Consensus        21 ~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p  100 (383)
                      ...++++||+++.+++.|  |+++ |++.|+|+++||||||.++|||++|++.+.|.                .....+|
T Consensus         3 ~~~~~~~kAav~~~~~~p--l~i~-ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~----------------~~~~~~p   63 (199)
T d1cdoa1           3 VGKVIKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEG----------------KHKDGFP   63 (199)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTT----------------CCTTSCS
T ss_pred             CCCceEEEEEEEecCCCC--cEEE-EEECCCCCCCEEEEEEEEEEEecchhhhhhhc----------------ccccccc
Confidence            456788999999998877  7888 89999999999999999999999999999886                2335689


Q ss_pred             ccccCceeEEEEecCCCCCCCCCCCEEEEeecC---------------------------------------------CC
Q psy9949         101 LTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQP---------------------------------------------HK  135 (383)
Q Consensus       101 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~  135 (383)
                      .++|||++|+|+++|+++++|++||||+.....                                             ..
T Consensus        64 ~i~GhE~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  143 (199)
T d1cdoa1          64 VVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLG  143 (199)
T ss_dssp             EECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGG
T ss_pred             cccccccceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccc
Confidence            999999999999999999999999999764210                                             01


Q ss_pred             CCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEE
Q psy9949         136 QGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL  195 (383)
Q Consensus       136 ~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~  195 (383)
                      +|+||||++++.++++++|++++++++|++.+++.|+++++....+.    +.|++|||+
T Consensus       144 ~Ggfaey~~v~~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~----~~G~tVlv~  199 (199)
T d1cdoa1         144 TSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHG----KCIRTVLSL  199 (199)
T ss_dssp             TCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTT----CCSEEEEEC
T ss_pred             cCCceEEEEEchHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCC----CCCCEEEeC
Confidence            49999999999999999999999999999999999999999877777    889999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=6.5e-30  Score=214.06  Aligned_cols=149  Identities=19%  Similarity=0.262  Sum_probs=127.0

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |+|+ +.+++   +|+++ ++|.|+|+++|||||+.++|||++|++.+.+....             ......|+++|||
T Consensus         3 maAV-l~g~~---~l~~~-e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~-------------~~~~~~p~i~GhE   64 (178)
T d1e3ja1           3 LSAV-LYKQN---DLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIA-------------DFIVKDPMVIGHE   64 (178)
T ss_dssp             EEEE-EEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSS-------------SCBCCSCEECCCE
T ss_pred             eEEE-EEcCC---cEEEE-EeECCCCCCCEEEEEEEEEcccCchhhhhccCccc-------------cccccCCeeeccc
Confidence            4444 55544   48999 89999999999999999999999999988764110             1335678999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|+++++|++||||+....                         ...+|+|+||+++|+++++++|+++++++
T Consensus        65 ~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~  144 (178)
T d1e3ja1          65 ASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQ  144 (178)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGG
T ss_pred             cceEEEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHH
Confidence            99999999999999999999976421                         23469999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCC
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGAS  198 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~  198 (383)
                      ++.+++++.|||++++ .+++    ++|++|+|+||.
T Consensus       145 aa~~~~~~~ta~~a~~-~~~~----~~g~~VlVig~C  176 (178)
T d1e3ja1         145 LVTHSFKLEQTVDAFE-AARK----KADNTIKVMISC  176 (178)
T ss_dssp             GEEEEEEGGGHHHHHH-HHHH----CCTTCSEEEEEC
T ss_pred             HHHHHhHHHHHHHHHH-HhCC----CCCCEEEEEccc
Confidence            9999999999999986 7888    999999999964

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.4e-28  Score=199.09  Aligned_cols=143  Identities=19%  Similarity=0.221  Sum_probs=124.8

Q ss_pred             eeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCce
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRDF  107 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~  107 (383)
                      +.+.++++|+|+.|+++ +.+.|+|+++||+|||.+++||++|+++++|.                .....+|.++|||+
T Consensus         2 ~~i~~~~~G~pe~l~~~-e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~----------------~~~~~~p~~~G~e~   64 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGL----------------YPPPSLPSGLGTEA   64 (147)
T ss_dssp             EEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTS----------------SCCSSSSBCCCSCE
T ss_pred             eEEEEcccCCCceeEEE-EecCCCCCCCEEEEEEEEecccceeeeeecCC----------------CCCCcceeeecccc
Confidence            45778899999999999 89999999999999999999999999999987                23467899999999


Q ss_pred             eEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHH--HhhhHHHHHHHHHHHHhhhcCcc
Q psy9949         108 CGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEA--AGVLYTGLTAWSALQITAALGLV  185 (383)
Q Consensus       108 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a--a~l~~~~~tA~~~l~~~~~~~~~  185 (383)
                      +|+|+++|+++++|++||||+....  ..|+|+||++++.+.++++|++++++++  ++++....|+++++. ..++   
T Consensus        65 ~G~V~~vG~~v~~~~vGdrV~~~~~--~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~-~~~~---  138 (147)
T d1qora1          65 AGIVSKVGSGVKHIKAGDRVVYAQS--ALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEIL-ESRA---  138 (147)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESCC--SSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHH-HTTC---
T ss_pred             ccceeeeeeecccccccceeeeecc--ccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHH-HhCC---
Confidence            9999999999999999999976543  3599999999999999999999987744  455677778888886 4677   


Q ss_pred             CCCCCEEEE
Q psy9949         186 YPRDKRVLV  194 (383)
Q Consensus       186 ~~~~~~VlI  194 (383)
                       ++|++|||
T Consensus       139 -~~G~~VLI  146 (147)
T d1qora1         139 -TQGSSLLI  146 (147)
T ss_dssp             -CCBCCEEE
T ss_pred             -CCCCEEEe
Confidence             99999998

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=9.2e-29  Score=209.62  Aligned_cols=148  Identities=20%  Similarity=0.180  Sum_probs=129.6

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||+++.++|++  |+++ ++|.|+|+++||||||.++|||++|+++++|.                .....+|+++|
T Consensus         5 ~~~kAav~~~~g~~--l~i~-evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~----------------~~~~~~p~v~G   65 (197)
T d2fzwa1           5 IKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA----------------DPEGCFPVILG   65 (197)
T ss_dssp             EEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTC----------------CTTCCSSBCCC
T ss_pred             eEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEecCCCCcHHHHcCC----------------cccccccccCC
Confidence            57999999999987  8889 89999999999999999999999999999986                23456899999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeec---------------------------------------------CCCCCCc
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------------------------PHKQGSF  139 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------------------------~~~~g~~  139 (383)
                      ||++|+|+++|++|+.+++||||+....                                             ...+|+|
T Consensus        66 hE~~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~Ggf  145 (197)
T d2fzwa1          66 HLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTF  145 (197)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred             cceeeEEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccc
Confidence            9999999999999999999999975311                                             0113899


Q ss_pred             eEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEE
Q psy9949         140 SKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL  195 (383)
Q Consensus       140 a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~  195 (383)
                      |||+++++.+++++|++++++++|++++++.|++.++.....-    +.+++|||+
T Consensus       146 Aey~vvp~~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g----~~~~tvvvi  197 (197)
T d2fzwa1         146 SEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSG----KSIRTVVKI  197 (197)
T ss_dssp             BSEEEEEGGGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHT----CCSEEEEEC
T ss_pred             eeEEEechHHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCC----CcCCEEEeC
Confidence            9999999999999999999999999999999999998755444    678899874

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=1.5e-28  Score=199.93  Aligned_cols=148  Identities=18%  Similarity=0.168  Sum_probs=129.8

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||+++++++++..+.++ +++.|+|++|||||||.++|||++|++...|..               ......|+++|
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~-~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~---------------~~~~~~p~v~g   65 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDG---------------KIVKTYPFVPG   65 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGG---------------SSCCSSSBCCC
T ss_pred             CceEEEEEEecCCceEEEEE-EccCCCCCCCEEEEEEEEeCCChHHHHHHhhcc---------------cccccccceee
Confidence            47999999999998888898 899999999999999999999999999888762               13356789999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA  181 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~  181 (383)
                      +|++|+|++  .+++.|++||+|++...   ...+|+||||+++|.+.++++|++++ .+||+++++++|||.++...++
T Consensus        66 ~e~~G~v~~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~  142 (152)
T d1xa0a1          66 IDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGE  142 (152)
T ss_dssp             SEEEEEEEE--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTC
T ss_pred             eeeeeeeec--cCCCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999  55678999999998743   23469999999999999999999997 5788899999999999987887


Q ss_pred             cCccCCCCCEEEEEc
Q psy9949         182 LGLVYPRDKRVLVLG  196 (383)
Q Consensus       182 ~~~~~~~~~~VlI~g  196 (383)
                      +    + |++||++|
T Consensus       143 ~----~-G~tVL~l~  152 (152)
T d1xa0a1         143 L----R-GRTVVRLA  152 (152)
T ss_dssp             C----C-SEEEEECC
T ss_pred             C----C-CCEEEEcC
Confidence            6    5 99999975

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=6.5e-29  Score=212.15  Aligned_cols=150  Identities=17%  Similarity=0.173  Sum_probs=128.8

Q ss_pred             CCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          20 HLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        20 ~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      +...|++|||+++.++++|  |+++ |+|.|+|+++||||||.++|||++|++.++|.                 ....+
T Consensus         2 ~~~~~~~~KAaV~~~~g~p--l~i~-evp~P~p~~geVlVkv~a~gic~sD~~~~~G~-----------------~~~~~   61 (202)
T d1e3ia1           2 TQGKVIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK-----------------KKALF   61 (202)
T ss_dssp             CTTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-----------------SCCCS
T ss_pred             CCCCeEEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEeccccceeeee-----------------ccccc
Confidence            3457899999999999877  8889 89999999999999999999999999999886                 22567


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEeec-----------------------------------------------
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ-----------------------------------------------  132 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-----------------------------------------------  132 (383)
                      |+++|||++|+|+++|++++++++||||++...                                               
T Consensus        62 P~v~GHE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v  141 (202)
T d1e3ia1          62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSI  141 (202)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEE
T ss_pred             ccccccccceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceee
Confidence            999999999999999999999999999976421                                               


Q ss_pred             --CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEc
Q psy9949         133 --PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG  196 (383)
Q Consensus       133 --~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~g  196 (383)
                        ...+|+|+||++++++.++++|++++++.++++.+++.++++++. .  +    ++|++|.|..
T Consensus       142 ~~~~~~G~faey~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~-~--~----k~G~~V~vi~  200 (202)
T d1e3ia1         142 YHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAID-L--M----KEGKSIRTIL  200 (202)
T ss_dssp             BCCTTTCCSBSEEEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHH-H--H----HTTCCSEEEE
T ss_pred             ecccccCCceEEEEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHH-h--C----CCCCEEEEEE
Confidence              011389999999999999999999999988888888888888875 2  3    7888887764

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=4.5e-28  Score=201.02  Aligned_cols=145  Identities=22%  Similarity=0.270  Sum_probs=125.2

Q ss_pred             eeEEEeecCCCceeEeeccccCCCC-CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          28 AAWQISSYGGADELQFNDNVKTPIL-KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        28 ~a~~~~~~g~~~~l~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      ||+++.++|+|  |+++ +++.|++ +++||||||.++|||++|++++.|..+..             ....+|+++|||
T Consensus         1 kA~~~~~~g~p--l~i~-~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~-------------~~~~~P~v~GhE   64 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHEL-------------LQPKLPYTLGHE   64 (171)
T ss_dssp             CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHH-------------HCCCSSEECCCC
T ss_pred             CEEEEEeCCCC--CEEE-EeeCCCCCCCCEEEEEEEecccceeeehccCCCcccc-------------cCCcccccccee
Confidence            78999999987  8888 8999986 58999999999999999999998863211             224678999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec------------------------CCCCCCceEEEeecCcccccCCCCCCHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ------------------------PHKQGSFSKLILADSALVHKKPSNISDEEA  162 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~~a  162 (383)
                      ++|+|+++|++++++++||||++...                        ...+|+|+||++++.++++++|++++++.+
T Consensus        65 ~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~a  144 (171)
T d1h2ba1          65 NVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVD  144 (171)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEE
T ss_pred             eeeeeecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHH
Confidence            99999999999999999999986421                        235699999999999999999999999888


Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEE
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLV  194 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI  194 (383)
                      +++.+++.|||++++ .+.+     .|++|||
T Consensus       145 a~~~~~~~ta~~al~-~~~~-----~G~~VlI  170 (171)
T d1h2ba1         145 IHKLDEINDVLERLE-KGEV-----LGRAVLI  170 (171)
T ss_dssp             EEEGGGHHHHHHHHH-TTCC-----SSEEEEE
T ss_pred             HHHHhHHHHHHHHHH-hcCC-----CCCEEEe
Confidence            888899999999996 5554     6899998

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=2.4e-28  Score=192.61  Aligned_cols=131  Identities=20%  Similarity=0.241  Sum_probs=117.9

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||++++++|++  ++++ +.+.|+|+++||+||+.++|||++|+++.+|..+               ....+|+++|||
T Consensus         1 MkA~~~~~~G~~--l~~~-e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~---------------~~~~~P~v~G~E   62 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYL---------------TRLHPPFIPGME   62 (131)
T ss_dssp             CEEEEECSTTSC--EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS---------------SCCCSSBCCCCE
T ss_pred             CcEEEEccCCCC--CEEE-EccCCCCCCCEEEEEEEEEecccccccccccccc---------------ccccceeEeeee
Confidence            899999999976  7888 8999999999999999999999999999998621               335689999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVY  186 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~  186 (383)
                      ++|+|           +||||+++..   +|+|+||+++++++++++|+++++++||.+++.+.|||++|.+.+      
T Consensus        63 ~~G~V-----------vGd~V~~~~~---~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g------  122 (131)
T d1iz0a1          63 VVGVV-----------EGRRYAALVP---QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG------  122 (131)
T ss_dssp             EEEEE-----------TTEEEEEECS---SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT------
T ss_pred             eEEee-----------ccceEEEEec---cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc------
Confidence            99999           3999999875   699999999999999999999999999999999999999997655      


Q ss_pred             CCCCEEEEE
Q psy9949         187 PRDKRVLVL  195 (383)
Q Consensus       187 ~~~~~VlI~  195 (383)
                      +.|++||++
T Consensus       123 ~~g~tvl~l  131 (131)
T d1iz0a1         123 HTGKVVVRL  131 (131)
T ss_dssp             CCBEEEEEC
T ss_pred             cCCCEEEEC
Confidence            678998873

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=7.8e-28  Score=200.15  Aligned_cols=144  Identities=23%  Similarity=0.259  Sum_probs=120.2

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++++++++  |+++ +++.|+|++|||||||+++|||++|++.+++..               .....+|.++|||
T Consensus         1 MkA~v~~~~g~p--l~i~-~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~---------------~~~~~~p~v~GhE   62 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW---------------PVKPKLPLIPGHE   62 (171)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCS---------------SSCCCSSBCCCSC
T ss_pred             CeEEEEecCCCC--cEEE-EeECCCCCCCeEEEEEEEeeccccceeeeeccc---------------ccccccccccCCE
Confidence            899999998876  8888 899999999999999999999999999887641               2345688999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee-------------------------cCCCCCCceEEEeecCcccccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI-------------------------QPHKQGSFSKLILADSALVHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~-------------------------~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~  161 (383)
                      ++|+|+++|++++++++||||+...                         +...+|+|+||+++++++++++|++++++.
T Consensus        63 ~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~  142 (171)
T d1rjwa1          63 GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEV  142 (171)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEE
T ss_pred             EEEEEEEecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHH
Confidence            9999999999999999999997421                         123469999999999999999999999865


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEc
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG  196 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~g  196 (383)
                      |+ +.+ ..++++.+. .+.+     +|++|||+|
T Consensus       143 A~-l~~-~~~~~~~~~-~~~~-----~G~tVlViG  169 (171)
T d1rjwa1         143 QP-LEK-INEVFDRML-KGQI-----NGRVVLTLE  169 (171)
T ss_dssp             EE-GGG-HHHHHHHHH-TTCC-----SSEEEEECC
T ss_pred             HH-HHH-HHHHHHHHH-hcCC-----CCCEEEEeC
Confidence            54 443 346777765 4544     599999998

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=2.6e-27  Score=197.62  Aligned_cols=144  Identities=22%  Similarity=0.301  Sum_probs=120.5

Q ss_pred             cccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          23 YSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      |++.|||+++++++++  |+++ +++.|+|+++||||||.++|||++|+++++|.                ....++|++
T Consensus         1 m~~k~kA~v~~~~~~p--l~i~-ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~----------------~~~~~~P~v   61 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP--LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGE----------------DPRVPLPII   61 (184)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTC----------------CTTCCSSBC
T ss_pred             CCceEEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEECCCCCchhheecc----------------CCccccccc
Confidence            4678999999998877  8888 89999999999999999999999999999986                223568999


Q ss_pred             ccCceeEEEEecCCCCC-----CCCCCCEEEEeec---------------------------------CCCCCCceEEEe
Q psy9949         103 LGRDFCGKIVAKGPRVT-----DLNIDDVVYGVIQ---------------------------------PHKQGSFSKLIL  144 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~-----~~~~Gd~V~~~~~---------------------------------~~~~g~~a~~~~  144 (383)
                      +|||++|+|+++|++|+     ++++||||+....                                 ...+|+|+||++
T Consensus        62 lGHE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~  141 (184)
T d1vj0a1          62 LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIV  141 (184)
T ss_dssp             CCCEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEE
T ss_pred             cceeeeeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEE
Confidence            99999999999999986     4689999975310                                 023699999999


Q ss_pred             ec-CcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEc
Q psy9949         145 AD-SALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG  196 (383)
Q Consensus       145 v~-~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~g  196 (383)
                      ++ +++++++|++++++++      +.+|++++. .+++    ++|++|+|+.
T Consensus       142 v~~~~~v~~ip~~l~~~~p------l~~A~~a~~-~~~~----~~G~~VlI~~  183 (184)
T d1vj0a1         142 LDPETDVLKVSEKITHRLP------LKEANKALE-LMES----REALKVILYP  183 (184)
T ss_dssp             ECTTCCEEEECTTCCEEEE------GGGHHHHHH-HHHH----TSCSCEEEEC
T ss_pred             echhHcEEECCCCCCHHHH------HHHHHHHHH-HhCC----CcCCEEEEee
Confidence            95 6899999999986532      235777876 7788    9999999984

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=1.1e-26  Score=196.01  Aligned_cols=145  Identities=20%  Similarity=0.231  Sum_probs=121.6

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|+|+++.+.+.+  |+++ +++.|+|++|||||||.++|||++|++++.|.                 ...++|+++|
T Consensus         2 k~~~Aav~~~~g~~--l~l~-~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~-----------------~~~~~P~i~G   61 (194)
T d1f8fa1           2 KDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK-----------------YPVPLPAVLG   61 (194)
T ss_dssp             EEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTS-----------------SCCCSSBCCC
T ss_pred             ceeEEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEecCchHhhhhhc-----------------ccccCCcccc
Confidence            47899999988866  8889 89999999999999999999999999999886                 2246899999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeecC----------------------------------------------CCCCC
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQP----------------------------------------------HKQGS  138 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~  138 (383)
                      ||++|+|+++|+++++|++||||+.....                                              ...|+
T Consensus        62 HE~~G~V~~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~  141 (194)
T d1f8fa1          62 HEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSS  141 (194)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCC
T ss_pred             cceEEEeeecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccc
Confidence            99999999999999999999999653110                                              01278


Q ss_pred             ceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEE
Q psy9949         139 FSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVV  217 (383)
Q Consensus       139 ~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi  217 (383)
                      |+||.+++..+++++|++++++                             +.+++.| +|++|++++|+|+.+|+ +|+
T Consensus       142 fae~~~v~~~~~~~ip~~i~~~-----------------------------~~~~i~g-~g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         142 FATYALSRENNTVKVTKDFPFD-----------------------------QLVKFYA-FDEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             SBSEEEEEGGGEEEECTTCCGG-----------------------------GGEEEEE-GGGHHHHHHHHHHTSCSEEEE
T ss_pred             cceeEEEehHHEEECCCCCCcc-----------------------------cEEEEeC-cHHHHHHHHHHHHHcCCCEEE
Confidence            9999999999999999887642                             2245555 89999999999999999 555


Q ss_pred             EE
Q psy9949         218 TT  219 (383)
Q Consensus       218 ~~  219 (383)
                      ++
T Consensus       192 aV  193 (194)
T d1f8fa1         192 KI  193 (194)
T ss_dssp             EC
T ss_pred             Ee
Confidence            54

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9e-27  Score=195.74  Aligned_cols=145  Identities=19%  Similarity=0.243  Sum_probs=120.4

Q ss_pred             ceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccC
Q psy9949          26 RTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGR  105 (383)
Q Consensus        26 ~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~  105 (383)
                      .|.|++++.++   +|+++ +++.|+|+++||||||.++|||++|++++++....             ....++|+++||
T Consensus         7 ~~~a~V~~gp~---~l~l~-evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~-------------~~~~~~p~i~Gh   69 (185)
T d1pl8a1           7 NNLSLVVHGPG---DLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIG-------------NFIVKKPMVLGH   69 (185)
T ss_dssp             CCEEEEEEETT---EEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEET-------------TEECSSCEECCC
T ss_pred             CCEEEEEeCCC---eEEEE-EeECCCCCCCEEEEEEEEEEeeCchhhhhcccccc-------------ccCCCCCeeeee
Confidence            68899999865   48999 89999999999999999999999999998764110             123567899999


Q ss_pred             ceeEEEEecCCCCCCCCCCCEEEEeec-------------------------CCCCCCceEEEeecCcccccCCCCCCHH
Q psy9949         106 DFCGKIVAKGPRVTDLNIDDVVYGVIQ-------------------------PHKQGSFSKLILADSALVHKKPSNISDE  160 (383)
Q Consensus       106 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~ip~~~~~~  160 (383)
                      |++|+|+++|+++++|++||||+....                         ...+|+|+||++++.++++++|++++++
T Consensus        70 E~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~  149 (185)
T d1pl8a1          70 EASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPL  149 (185)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGG
T ss_pred             eeeeeEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHH
Confidence            999999999999999999999975311                         1346899999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEE
Q psy9949         161 EAAGVLYTGLTAWSALQITAALGLVYPRDKRVLV  194 (383)
Q Consensus       161 ~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI  194 (383)
                      +|+.+++  .+|++++. ..++    ++|++|+|
T Consensus       150 ~aa~~pl--~~a~~a~~-~~~~----~~G~~VlI  176 (185)
T d1pl8a1         150 VTHRFPL--EKALEAFE-TFKK----GLGLKIML  176 (185)
T ss_dssp             EEEEEEG--GGHHHHHH-HHHT----TCCSEEEE
T ss_pred             HHHHHHH--HHHHHHHH-HhCC----CCCCEEEE
Confidence            9887653  34666665 5666    89999998

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=2.4e-28  Score=200.95  Aligned_cols=154  Identities=21%  Similarity=0.179  Sum_probs=133.2

Q ss_pred             cceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcccc
Q psy9949          25 TRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLG  104 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G  104 (383)
                      ++|||++++++++...|+++ +++.|++++|||||||+|+|||++|++...|..+               .....|.++|
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~-~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~---------------~~~~~~~~~g   65 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN---------------IVREYPLILG   65 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT---------------TCSSCSEECC
T ss_pred             CcEEEEEEEecCCCeEEEEE-EcCCCCCCCCEEEEEEEEecccchhhheeeeccc---------------ccccceeeee
Confidence            47999999999999899999 8999999999999999999999999999988622               2346688999


Q ss_pred             CceeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhh
Q psy9949         105 RDFCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAA  181 (383)
Q Consensus       105 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~  181 (383)
                      +|++|+|++  +.++++++||+|+....   ...+|+|+||+++|++.++++|+++|+++||.+++.++|||+++. ..+
T Consensus        66 ~e~~G~v~~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~-~~~  142 (162)
T d1tt7a1          66 IDAAGTVVS--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EET  142 (162)
T ss_dssp             SEEEEEEEE--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECS-TTH
T ss_pred             eeccccccc--ccccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH-hcC
Confidence            999999999  56678999999988754   234699999999999999999999999999999999999998765 334


Q ss_pred             cCccCCCCCEEEEEcCCchH
Q psy9949         182 LGLVYPRDKRVLVLGASGGV  201 (383)
Q Consensus       182 ~~~~~~~~~~VlI~ga~g~v  201 (383)
                      .    ..+++|||+|++|++
T Consensus       143 ~----~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1         143 P----GALKDILQNRIQGRV  158 (162)
T ss_dssp             H----HHHHHTTTTCCSSEE
T ss_pred             C----CCCCEEEEECCcceE
Confidence            4    556789999877754

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=7.7e-29  Score=210.33  Aligned_cols=157  Identities=17%  Similarity=0.220  Sum_probs=128.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCC-------CCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPIL-------KSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~-------~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      +||++++++++   ++++ |++.|++       +++||+|||.++|||++|+++++|.                 ....+
T Consensus         2 ~kA~v~~~~~~---le~~-e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~-----------------~~~~~   60 (201)
T d1kola1           2 NRGVVYLGSGK---VEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGR-----------------TTAQV   60 (201)
T ss_dssp             EEEEEEEETTE---EEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTC-----------------SCCCT
T ss_pred             cEEEEEeCCCc---eEEE-EecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCC-----------------ccccc
Confidence            79999999774   7888 8888865       4699999999999999999999986                 22467


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEeec----------------------------------CCCCCCceEEEee
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ----------------------------------PHKQGSFSKLILA  145 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~----------------------------------~~~~g~~a~~~~v  145 (383)
                      |+++|||++|+|+++|++|++|++||||.....                                  ...+|+|+||+++
T Consensus        61 P~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~v  140 (201)
T d1kola1          61 GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLV  140 (201)
T ss_dssp             TCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEE
T ss_pred             ceeccceeeeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEe
Confidence            999999999999999999999999999964210                                  1235899999999


Q ss_pred             cC--cccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q psy9949         146 DS--ALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI  214 (383)
Q Consensus       146 ~~--~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~  214 (383)
                      |.  ..++++|++.++.+++++...+.++++++. ....    +.++    +| +|++|++++|+||++||
T Consensus       141 p~~~~~l~~iPd~~~~~~~~~~~~~~~~~~~a~~-~~~~----~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         141 PYADFNLLKLPDRDKAMEKINIAEVVGVQVISLD-DAPR----GYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             SSHHHHCEECSCHHHHHHTCCHHHHHTEEEECGG-GHHH----HHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             ehHHCeEEECCCCCChHHHHHHHHHHHHHHHHHH-hCCC----CCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            86  379999998877787777777777887775 3443    3332    46 89999999999999886

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3.9e-26  Score=183.55  Aligned_cols=132  Identities=16%  Similarity=0.168  Sum_probs=114.3

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++++++++..+.++ +++.|+|++|||+|||.++|||++|++...|..               .....+|+++|+|
T Consensus         1 MkA~v~~~~~~~~~l~i~-~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~---------------~~~~~~p~v~G~e   64 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKG---------------KIIRNFPMIPGID   64 (146)
T ss_dssp             CEEEEEECC---CEEEEE-ECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCS---------------SCCCSSSBCCCSE
T ss_pred             CeEEEEEcCCCceEEEEE-EcCCCCCCCCEEEEEEeeccCccceeeEEEeec---------------ccccccceecccc
Confidence            899999999998889999 899999999999999999999999999998862               1335678999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEeec---CCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVIQ---PHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSAL  176 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~---~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l  176 (383)
                      ++|+|+++|.  ..+++||+|++...   ...+|+||||+++|.++++++|+++|+++||+++++++||+..+
T Consensus        65 ~~G~V~~~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          65 FAGTVRTSED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             EEEEEEEECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             ccccceeecc--CCccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999766  46999999987653   24469999999999999999999999999999999999986554

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=3.6e-26  Score=190.92  Aligned_cols=151  Identities=21%  Similarity=0.218  Sum_probs=117.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.++|+|  |+++ |++.|+|+++||||||.++|||++|+++++|..+.....        ......+|+++|||
T Consensus         1 MKA~~~~~~G~p--l~i~-dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~--------~~~~~~~P~v~GhE   69 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIV--------EDLGVKLPVTLGHE   69 (177)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETT--------TTTCCCSCEECCCE
T ss_pred             CeEEEEEeCCCC--CEEE-EeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccc--------cccccCCCccccce
Confidence            899999999987  7888 899999999999999999999999999999863211100        01335689999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee------------------------cCCCCCCceEEEeecCcc-cccCCCCCCHHH
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI------------------------QPHKQGSFSKLILADSAL-VHKKPSNISDEE  161 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~------------------------~~~~~g~~a~~~~v~~~~-~~~ip~~~~~~~  161 (383)
                      ++|+|+++|+++++|++||||.+..                        +...+|+|+||++++... ++++|+..+.+.
T Consensus        70 ~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~  149 (177)
T d1jvba1          70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMIT  149 (177)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCE
T ss_pred             EEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHH
Confidence            9999999999999999999997542                        123459999999997655 556665554444


Q ss_pred             HHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEE
Q psy9949         162 AAGVLYTGLTAWSALQITAALGLVYPRDKRVLV  194 (383)
Q Consensus       162 aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI  194 (383)
                      |+....++.+|++++. ..++     .|++|||
T Consensus       150 a~~~~~~~~~a~~~~~-~~~~-----~G~~VlI  176 (177)
T d1jvba1         150 KTMKLEEANEAIDNLE-NFKA-----IGRQVLI  176 (177)
T ss_dssp             EEEEGGGHHHHHHHHH-TTCC-----CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHH-hhcc-----cCCceEC
Confidence            4444567788999986 5553     5888887

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=3.9e-26  Score=194.00  Aligned_cols=150  Identities=15%  Similarity=0.128  Sum_probs=120.5

Q ss_pred             CCCcccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCC
Q psy9949          20 HLKYSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEF   99 (383)
Q Consensus        20 ~~~~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   99 (383)
                      ++..+++|||+++.+++++  |+++ +++.|+|+++||||||.++|||++|++.++|.                 ....+
T Consensus         2 ~~~~~~k~KAavl~~~~~~--l~i~-ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~-----------------~~~~~   61 (198)
T d2jhfa1           2 TAGKVIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGT-----------------LVTPL   61 (198)
T ss_dssp             CTTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTS-----------------SCCCS
T ss_pred             CCCCceEEEEEEEecCCCC--CEEE-EEECCCCCCCEEEEEEEEEecccccceeecCC-----------------ccccc
Confidence            4566889999999988876  8889 89999999999999999999999999999986                 22467


Q ss_pred             CccccCceeEEEEecCCCCCCCCCCCEEEEeec---------------------------------------------CC
Q psy9949         100 PLTLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------------------------PH  134 (383)
Q Consensus       100 p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------------------------~~  134 (383)
                      |+++|||++|+|+++|++++++++||||++...                                             ..
T Consensus        62 P~i~GHE~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~  141 (198)
T d2jhfa1          62 PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFL  141 (198)
T ss_dssp             SBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCST
T ss_pred             ceecccceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCC
Confidence            999999999999999999999999999975311                                             01


Q ss_pred             CCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEc
Q psy9949         135 KQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLG  196 (383)
Q Consensus       135 ~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~g  196 (383)
                      ..|+|+||+++++.+++++|+.++++.++....++.+...+   ...+    ++|++|+|..
T Consensus       142 ~~G~fAEy~~v~~~~~~~~p~~~~~e~l~~~~~~~~~v~~g---~~~l----~~G~~VaVi~  196 (198)
T d2jhfa1         142 GTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINEG---FDLL----RSGESIRTIL  196 (198)
T ss_dssp             TTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHH---HHHH----HTTCCSEEEE
T ss_pred             CCCcccCeEEeCHHHeEECCCCCCHHHHHHHHHHHHhhhhC---Ccee----eCCCEEEEEE
Confidence            23899999999999999999998877655543332222222   2345    7888887763

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=1.1e-27  Score=200.22  Aligned_cols=168  Identities=17%  Similarity=0.126  Sum_probs=134.6

Q ss_pred             cceeeEEEeecCCCc---eeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          25 TRTAAWQISSYGGAD---ELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        25 ~~~~a~~~~~~g~~~---~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      .+|||++++++|+|.   +++.. +.|.|+|+++||||||++++||++|+++++|..+.....      .........|.
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~-~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~------~~~~~~~~~~~   74 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSF-EIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK------TTGFGTTEPAA   74 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEE-EECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCC------BSTTCCSSCBE
T ss_pred             ceeEEEEEccCCCcccccEEEEE-ECCCCCCCcCEEEEEEEEeccCcceeEEEecCccccccc------ccccCCCCCCc
Confidence            479999999999874   24455 678889999999999999999999999999874321110      01123346788


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHH-hh
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQI-TA  180 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~-~~  180 (383)
                      ++|+|++|+|++.|.++..++.||+|.....  .+|+|+||+++++++++++|++++  +++++++..+|||+++.. ..
T Consensus        75 v~G~e~~g~V~~~~~~~~~~~~g~~v~~~~~--~~g~~aey~~v~~~~~~~iP~~~~--~~~a~~~~~~ta~~~l~~~~~  150 (175)
T d1gu7a1          75 PCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV--NFGTWRTHALGNDDDFIKLPNPAQ--SKANGKPNGLTDAKSIETLYD  150 (175)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEESSS--CCCCSBSEEEEEGGGEEEECCHHH--HHHTTCSCCCCCCCCEEEECC
T ss_pred             ccccccccccccccccccccccccceecccc--ccccccceeeehhhhccCCCccch--hhhhccchHHHHHHHHHHHhc
Confidence            9999999999999999999999999987643  459999999999999999999764  444455677889988763 35


Q ss_pred             hcCccCCCCCEEEEEc-CCchHHHHHHH
Q psy9949         181 ALGLVYPRDKRVLVLG-ASGGVGTMAVQ  207 (383)
Q Consensus       181 ~~~~~~~~~~~VlI~g-a~g~vG~~ai~  207 (383)
                      ++    ++|++|+|+| |+|++|.++||
T Consensus       151 ~~----~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         151 GT----KPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             SS----SCHHHHHHHHHHTGGGSCEEEE
T ss_pred             CC----CCCCEEEEECccchhhhheEEe
Confidence            67    9999999998 45789988776

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=1.6e-26  Score=195.84  Aligned_cols=146  Identities=17%  Similarity=0.164  Sum_probs=118.5

Q ss_pred             cccceeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCcc
Q psy9949          23 YSTRTAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLT  102 (383)
Q Consensus        23 ~~~~~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~  102 (383)
                      ...+|||+++.+++++  |+++ |++.|+|+++||||||.++|||++|++.++|..                 ...+|.+
T Consensus         5 ~~~~~KAav~~~~g~~--l~i~-ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~-----------------~~~~P~i   64 (198)
T d1p0fa1           5 KDITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEII-----------------PSKFPVI   64 (198)
T ss_dssp             SCEEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS-----------------CCCSSBC
T ss_pred             CceEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEecccceeeeecc-----------------ccccccc
Confidence            3558999999998876  8899 899999999999999999999999999998862                 2467999


Q ss_pred             ccCceeEEEEecCCCCCCCCCCCEEEEeec---------------------------------------------CCCCC
Q psy9949         103 LGRDFCGKIVAKGPRVTDLNIDDVVYGVIQ---------------------------------------------PHKQG  137 (383)
Q Consensus       103 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~---------------------------------------------~~~~g  137 (383)
                      +|||++|+|+++|++++++++||||+....                                             ...+|
T Consensus        65 ~GHE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g  144 (198)
T d1p0fa1          65 LGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTS  144 (198)
T ss_dssp             CCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTC
T ss_pred             cceeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCc
Confidence            999999999999999999999999975310                                             01248


Q ss_pred             CceEEEeecCcccccCCCCCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHH
Q psy9949         138 SFSKLILADSALVHKKPSNISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGT  203 (383)
Q Consensus       138 ~~a~~~~v~~~~~~~ip~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~  203 (383)
                      +|+||+.++...++++|+.++.+.++...+.          ...+    .+++.|+|.| +|++|+
T Consensus       145 ~faey~~v~~~~~~kip~~~~~~~~~~~~~~----------~~~v----~~~~~vlv~G-~G~iGl  195 (198)
T d1p0fa1         145 TFTEYTVVADIAVAKIDPKINVNFLVSTKLT----------LDQI----NKAFELLSSG-QGVRSI  195 (198)
T ss_dssp             CSBSEEEEETTSEEEECTTSCGGGGEEEEEC----------GGGH----HHHHHHTTTS-SCSEEE
T ss_pred             cceeeEEecHHHEEECCCCCCHHHHHHhhcc----------hhhc----CCCCEEEEEC-CCcceE
Confidence            8999999999999999999987765544332          2222    3445677777 777765

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.5e-24  Score=180.37  Aligned_cols=133  Identities=18%  Similarity=0.145  Sum_probs=108.5

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||++...+++|  |+++ |++.|+|++|||||||.++|||++|++.+.|.                .....+|+++|||
T Consensus         1 m~a~~~~~~~~p--l~i~-ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~----------------~~~~~~P~i~GhE   61 (179)
T d1uufa1           1 IKAVGAYSAKQP--LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSE----------------WAGTVYPCVPGHE   61 (179)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCT----------------TSCCCSSBCCCCC
T ss_pred             CeEEEEccCCCC--CEEE-EecCCCCCCCEEEEEEEEECCCCCcceeeeee----------------ecccccccccccc
Confidence            789999988876  8899 89999999999999999999999999999886                2335679999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee-----c----------------------------CCCCCCceEEEeecCcccccC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI-----Q----------------------------PHKQGSFSKLILADSALVHKK  153 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~-----~----------------------------~~~~g~~a~~~~v~~~~~~~i  153 (383)
                      ++|+|+++|++|+++++||||....     +                            ...+|+|+||+++++++++++
T Consensus        62 ~~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~i  141 (179)
T d1uufa1          62 IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRI  141 (179)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEEC
T ss_pred             ccccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEEC
Confidence            9999999999999999999996321     0                            023489999999999999999


Q ss_pred             CCCCCHHHHHhhhHHHHHHHHHHHHhhhc
Q psy9949         154 PSNISDEEAAGVLYTGLTAWSALQITAAL  182 (383)
Q Consensus       154 p~~~~~~~aa~l~~~~~tA~~~l~~~~~~  182 (383)
                      |+......++   .++.++++++. .+.+
T Consensus       142 p~~~~~~~~a---~~l~~a~~a~~-~a~v  166 (179)
T d1uufa1         142 RVADIEMIRA---DQINEAYERML-RGDV  166 (179)
T ss_dssp             CCCCEEEECG---GGHHHHHHHHH-TTCS
T ss_pred             CCCCcChhHh---chhHHHHHHHH-HhCc
Confidence            9765332222   24457888886 5554

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=9.1e-25  Score=181.21  Aligned_cols=120  Identities=18%  Similarity=0.201  Sum_probs=101.8

Q ss_pred             eeeEEEeecCCCceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCccccCc
Q psy9949          27 TAAWQISSYGGADELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPLTLGRD  106 (383)
Q Consensus        27 ~~a~~~~~~g~~~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e  106 (383)
                      |||+++.++++   ++++ +.|.|+|+++|||||++++|||++|++.+.+.                .....+|+++|||
T Consensus         1 MKa~v~~~~~~---l~i~-e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~----------------~~~~~~P~i~GhE   60 (177)
T d1jqba1           1 MKGFAMLGINK---LGWI-EKERPVAGSYDAIVRPLAVSPCTSDIHTVFEG----------------ALGDRKNMILGHE   60 (177)
T ss_dssp             CEEEEEEETTE---EEEE-ECCCCCCCTTCEEEEEEEECCCHHHHHHHHHC----------------TTCCCSSEECCCC
T ss_pred             CeEEEEEeCCC---eEEE-EeeCCCCCCCEEEEEEEEEecCCCcccccccC----------------CCCCCCCccCcce
Confidence            89999999775   7899 89999999999999999999999999877553                1335679999999


Q ss_pred             eeEEEEecCCCCCCCCCCCEEEEee---------------------------cCCCCCCceEEEeecC--cccccCCCCC
Q psy9949         107 FCGKIVAKGPRVTDLNIDDVVYGVI---------------------------QPHKQGSFSKLILADS--ALVHKKPSNI  157 (383)
Q Consensus       107 ~~G~Vv~vG~~v~~~~~Gd~V~~~~---------------------------~~~~~g~~a~~~~v~~--~~~~~ip~~~  157 (383)
                      ++|+|+++|+++++|++||||+...                           +...+|+|+||+++|.  ..++++|+++
T Consensus        61 ~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~  140 (177)
T d1jqba1          61 AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDV  140 (177)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTS
T ss_pred             eeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCc
Confidence            9999999999999999999997531                           1235699999999986  3689999999


Q ss_pred             CHHHHHhhh
Q psy9949         158 SDEEAAGVL  166 (383)
Q Consensus       158 ~~~~aa~l~  166 (383)
                      ++++++...
T Consensus       141 ~~~~~~~~~  149 (177)
T d1jqba1         141 DLSKLVTHV  149 (177)
T ss_dssp             CGGGGEEEE
T ss_pred             chHHHHHHH
Confidence            988776543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.1e-24  Score=177.95  Aligned_cols=124  Identities=23%  Similarity=0.322  Sum_probs=111.8

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCe
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNL  235 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~  235 (383)
                      +|+++||+++++++|||++|.+.+++    ++|++|||+||+|++|++++|+|+.+|++|+++++++ +.++++++|+++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~----~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~   76 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACV----KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE   76 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCC----CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCC----CCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccc
Confidence            58999999999999999999888888    9999999999899999999999999999999999654 678999999999


Q ss_pred             eeeCCChHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         236 VIDYNEPEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       236 v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ++|+++.++.+++++   ..++|++||++|++.....  +++++  ++|+++.+|.
T Consensus        77 vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~--~~~l~--~~G~iv~~G~  128 (174)
T d1yb5a2          77 VFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKD--LSLLS--HGGRVIVVGS  128 (174)
T ss_dssp             EEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHH--HHHEE--EEEEEEECCC
T ss_pred             ccccccccHHHHhhhhhccCCceEEeecccHHHHHHH--HhccC--CCCEEEEEec
Confidence            999999999988865   3579999999997665555  89999  9999999864

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=2.6e-24  Score=180.82  Aligned_cols=121  Identities=27%  Similarity=0.323  Sum_probs=109.5

Q ss_pred             HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeee
Q psy9949         160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVID  238 (383)
Q Consensus       160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~  238 (383)
                      +|||+++++++|||++|.+.+++    ++|++|||+||+|++|++++|+|+.+|++|++++++ ++.++++++|++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~----~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~   76 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRL----SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGD   76 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCC----CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEE
T ss_pred             CchhhhhHHHHHHHHHHHHHhCC----CCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccccc
Confidence            48999999999999999888888    999999999999999999999999999999999855 5678999999999999


Q ss_pred             CCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         239 YNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       239 ~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +++.++.+++++.   .|+|++||++|++.....  +++++  ++|+++.+|.
T Consensus        77 ~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~--~~~l~--~~G~~v~~G~  125 (183)
T d1pqwa_          77 SRSVDFADEILELTDGYGVDVVLNSLAGEAIQRG--VQILA--PGGRFIELGK  125 (183)
T ss_dssp             TTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHH--HHTEE--EEEEEEECSC
T ss_pred             CCccCHHHHHHHHhCCCCEEEEEecccchHHHHH--HHHhc--CCCEEEEEcc
Confidence            9999999988763   479999999998766555  99999  9999999864

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=2.1e-23  Score=174.55  Aligned_cols=125  Identities=26%  Similarity=0.329  Sum_probs=113.0

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCe
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      +|+++||+++++++|||++|.+.+++    +++++|+|+||+|++|++++|+|+..|++|++++++ ++.++++++|+++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l----~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~   76 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEI----KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ   76 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCC----CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCC----CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeE
Confidence            58999999999999999999988888    999999999999999999999999999999999855 5678999999999


Q ss_pred             eeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         236 VIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       236 v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ++|+++.++.+++++.   .++|+++|++|++.....  +.+++  ++|+++.++..
T Consensus        77 vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~--~~~l~--~~G~~v~~g~~  129 (179)
T d1qora2          77 VINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERS--LDCLQ--RRGLMVSFGNS  129 (179)
T ss_dssp             EEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHH--HHTEE--EEEEEEECCCT
T ss_pred             EEECCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHH--HHHHh--cCCeeeecccc
Confidence            9999999999988753   479999999998876665  89999  99999988643

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.88  E-value=9.5e-23  Score=168.99  Aligned_cols=165  Identities=24%  Similarity=0.244  Sum_probs=129.4

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      +++.|||+++|+++|||++++ ..++    +++++|+|+|++|++|++++++++.+|+ +|+++..+ ++.++++++|++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~-~~~~----~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~   75 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVR-KASL----DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD   75 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HTTC----CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCC----CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCc
Confidence            578999999999999999996 6788    9999999999889999999999999997 88888854 577899999999


Q ss_pred             eeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHh
Q psy9949         235 LVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL  311 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (383)
                      +++++++.++.+++++.   +++|++|||+|++.....+ +++++  ++|+++.+|.+...    ..+    ...  .+.
T Consensus        76 ~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a-~~~l~--~~G~iv~~G~~~~~----~~~----~~~--~~~  142 (170)
T d1jvba2          76 YVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVY-PKALA--KQGKYVMVGLFGAD----LHY----HAP--LIT  142 (170)
T ss_dssp             EEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTG-GGGEE--EEEEEEECCSSCCC----CCC----CHH--HHH
T ss_pred             eeeccCCcCHHHHHHHHhhcccchhhhcccccchHHHhh-hhhcc--cCCEEEEeccccCc----ccc----CHH--HHH
Confidence            99999988888777653   4799999999998765554 89999  99999998642110    001    111  111


Q ss_pred             hhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC
Q psy9949         312 KSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ  349 (383)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  349 (383)
                      .    +++.++      +....++++++++++++++||
T Consensus       143 ~----k~i~i~------Gs~~~~~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         143 L----SEIQFV------GSLVGNQSDFLGIMRLAEAGK  170 (170)
T ss_dssp             H----HTCEEE------ECCSCCHHHHHHHHHHHHTTS
T ss_pred             h----CCcEEE------EEecCCHHHHHHHHHHHHcCC
Confidence            1    222333      334457899999999999986

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.87  E-value=9.8e-23  Score=168.40  Aligned_cols=123  Identities=21%  Similarity=0.239  Sum_probs=102.6

Q ss_pred             CCHHHHHhhhHHHHHHHHHHH---HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQ---ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLN  232 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~---~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg  232 (383)
                      +|++|||+++++++|||+++.   +.+..    +++++|||+||+|++|.+++|+|+.+|++|++++++ ++.++++++|
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~----~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lG   76 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLT----PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLG   76 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC----GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTT
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCC----CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcc
Confidence            689999999999999997755   44666    789999999999999999999999999999999965 6789999999


Q ss_pred             CCeeeeCCChHHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         233 PNLVIDYNEPEAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       233 ~~~v~~~~~~~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +++++|+++. +.+.+..  .+++|+|||++|+.....+  +++++  ++|+++.+|.
T Consensus        77 a~~vi~~~~~-~~~~~~~~~~~gvD~vid~vgg~~~~~~--l~~l~--~~Griv~~G~  129 (176)
T d1xa0a2          77 AKEVLAREDV-MAERIRPLDKQRWAAAVDPVGGRTLATV--LSRMR--YGGAVAVSGL  129 (176)
T ss_dssp             CSEEEECC----------CCSCCEEEEEECSTTTTHHHH--HHTEE--EEEEEEECSC
T ss_pred             cceeeecchh-HHHHHHHhhccCcCEEEEcCCchhHHHH--HHHhC--CCceEEEeec
Confidence            9999998754 3444433  3589999999999987777  99999  9999999965

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.87  E-value=1.3e-22  Score=168.15  Aligned_cols=169  Identities=13%  Similarity=0.122  Sum_probs=127.5

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      +|+++|+.+++++.|||++++ .+++    ++|++|+|+| +|++|++++|+||.+|+ +|++++++ +++++++++|++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~-~a~~----~~g~~VlI~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~   74 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAE-LADI----EMGSSVVVIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGAT   74 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHH-HTTC----CTTCCEEEEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHH-HhCC----CCCCEEEEEc-CCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcc
Confidence            578999999999999999986 6888    9999999998 79999999999999998 79988865 567899999999


Q ss_pred             eeeeCCChHHHHHHhcC---CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHh
Q psy9949         235 LVIDYNEPEAMHSIAGA---GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLL  311 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~~~---~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (383)
                      +++++++.++.+.+.+.   .|+|+||||+|++.....+ +++++  ++|+++.+|.+....        .     +.+.
T Consensus        75 ~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a-~~~~~--~~G~iv~~G~~~~~~--------~-----~~~~  138 (174)
T d1jqba2          75 DILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQA-VKMVK--PGGIISNINYHGSGD--------A-----LLIP  138 (174)
T ss_dssp             EEECGGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHH-HHHEE--EEEEEEECCCCCSSS--------E-----EEEE
T ss_pred             ccccccchhHHHHHHHHhhccCcceEEEccCCHHHHHHH-HHHHh--cCCEEEEEeecCCCC--------c-----CcCc
Confidence            99999988888877653   4799999999998765554 89999  999999986432111        0     0111


Q ss_pred             hhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC
Q psy9949         312 KSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ  349 (383)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  349 (383)
                      ...+  ....+...+..+.....+...+++.++++.|+
T Consensus       139 ~~~~--~~~~~~~~i~g~~~~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         139 RVEW--GCGMAHKTIKGGLCPGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             TTTT--GGGTBCCEEEEBCCCCHHHHHHHHHHHHHTTS
T ss_pred             HhHH--HHHhCccEEEEecCCCCcccHHHHHHHHHcCC
Confidence            1111  11222233332333334566788889998875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=4.4e-22  Score=164.26  Aligned_cols=163  Identities=19%  Similarity=0.245  Sum_probs=127.1

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCe
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      +++++||+++|+++|||++++ .+++    +++++|+|+| +|++|++++|+||.+|++|++++++ +++++++++|+++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~-~~~~----~~g~~VlV~G-aG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~   74 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLK-QTNA----RPGQWVAISG-IGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASL   74 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HHTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCC----CCCCEEEEee-ccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccc
Confidence            578999999999999999997 6888    9999999998 6999999999999999999999966 5678999999999


Q ss_pred             eeeCCChHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhh
Q psy9949         236 VIDYNEPEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSN  314 (383)
Q Consensus       236 v~~~~~~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (383)
                      ++++++.++.+.+.+. .+.+.+++++++......+ +++++  ++|+++.+|.+.           +..  .+++..  
T Consensus        75 ~i~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~~--~~~~~~--  136 (166)
T d1llua2          75 TVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQA-IGMAR--RGGTIALVGLPP-----------GDF--PTPIFD--  136 (166)
T ss_dssp             EEETTTSCHHHHHHHHHSSEEEEEECCSCHHHHHHH-HTTEE--EEEEEEECCCCS-----------SEE--EEEHHH--
T ss_pred             cccccchhHHHHHHHhhcCCcccccccccchHHHHH-HHHhc--CCcEEEEEEecC-----------CCc--cCCHHH--
Confidence            9999998888777653 5778888888877765554 89999  999999986421           111  111111  


Q ss_pred             hccccccCCccEEEEEEcCCHHHHHHHHHHHHcC
Q psy9949         315 FESGELCKTNTIRWGFFMPIPYAVKEINKFIERG  348 (383)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  348 (383)
                      +    ..++.++ .+.+..++++++++++++++|
T Consensus       137 ~----~~k~~~i-~Gs~~~~~~d~~e~l~l~~~G  165 (166)
T d1llua2         137 V----VLKGLHI-AGSIVGTRADLQEALDFAGEG  165 (166)
T ss_dssp             H----HHTTCEE-EECCSCCHHHHHHHHHHHHTT
T ss_pred             H----HhCCcEE-EEEeecCHHHHHHHHHHHHCc
Confidence            1    2222232 233445688999999999987

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.8e-21  Score=160.68  Aligned_cols=165  Identities=21%  Similarity=0.273  Sum_probs=124.8

Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcCCC
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLNPN  234 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg~~  234 (383)
                      ..+++.+|++.|+++|+|++++ .+++    ++|++|+|+| +|++|++++|+||.+|++++++++ ++++++++++|++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~-~~~~----~~G~~VlI~G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad   76 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLR-HWQA----GPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD   76 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHH-HTTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS
T ss_pred             cccHHHHHHHHhHHHHHHHHHH-HhCC----CCCCEEEEec-cchHHHHHHHHhhcccccchhhccchhHHHHHhccCCc
Confidence            3567889999999999999996 7888    9999999998 699999999999999998888874 4567899999999


Q ss_pred             eeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhh
Q psy9949         235 LVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSN  314 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (383)
                      .++++.+.+....  ...++|++||++|++.....+ +++++  ++|+++.+|.+.           +..   ..+....
T Consensus        77 ~~i~~~~~~~~~~--~~~~~D~vid~~g~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~~---~~~~~~~  137 (168)
T d1uufa2          77 EVVNSRNADEMAA--HLKSFDFILNTVAAPHNLDDF-TTLLK--RDGTMTLVGAPA-----------TPH---KSPEVFN  137 (168)
T ss_dssp             EEEETTCHHHHHT--TTTCEEEEEECCSSCCCHHHH-HTTEE--EEEEEEECCCC---------------------CHHH
T ss_pred             EEEECchhhHHHH--hcCCCceeeeeeecchhHHHH-HHHHh--cCCEEEEeccCC-----------CCc---ccccHHH
Confidence            9999988664432  346899999999988765554 89999  999999985421           110   1111111


Q ss_pred             hccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCc
Q psy9949         315 FESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQI  350 (383)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  350 (383)
                      +    ..++..+ .+.+..+.++++++++++++++|
T Consensus       138 l----~~k~~~i-~Gs~~~~~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         138 L----IMKRRAI-AGSMIGGIPETQEMLDFCAEHGI  168 (168)
T ss_dssp             H----HTTTCEE-EECCSCCHHHHHHHHHHHHHHTC
T ss_pred             H----HHCCcEE-EEEeecCHHHHHHHHHHHHHcCC
Confidence            1    2222232 24445678999999999998764

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=1.4e-21  Score=161.35  Aligned_cols=164  Identities=21%  Similarity=0.179  Sum_probs=123.3

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCe
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNL  235 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~  235 (383)
                      ++++.||++.|++.|||++++ ..++    ++|++|+|+| +|++|++++|+||.+|++|++++ ++++.++++++|+++
T Consensus         1 lp~e~AApl~cag~Ta~~al~-~~~~----~~g~~vlI~G-aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~   74 (168)
T d1piwa2           1 IPSHLAAPLLCGGLTVYSPLV-RNGC----GPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADH   74 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HTTC----STTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCc----CCCCEEEEEC-CCCcchhHHHHhhhccccccccccchhHHHHhhccCCcE
Confidence            356889999999999999997 6788    9999999999 69999999999999999999998 456789999999999


Q ss_pred             eeeCCCh-HHHHHHhcCCCccEEEEcCCCCcc--cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949         236 VIDYNEP-EAMHSIAGAGPYDVILDAAGIPLD--QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK  312 (383)
Q Consensus       236 v~~~~~~-~~~~~i~~~~g~d~v~d~~g~~~~--~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (383)
                      ++++.+. ++.+.  ...++|.++||+++...  ...+ +++++  ++|+++.+|.+.           +..  .+++. 
T Consensus        75 ~i~~~~~~~~~~~--~~~~~d~vi~~~~~~~~~~~~~~-~~~l~--~~G~iv~~G~~~-----------~~~--~~~~~-  135 (168)
T d1piwa2          75 YIATLEEGDWGEK--YFDTFDLIVVCASSLTDIDFNIM-PKAMK--VGGRIVSISIPE-----------QHE--MLSLK-  135 (168)
T ss_dssp             EEEGGGTSCHHHH--SCSCEEEEEECCSCSTTCCTTTG-GGGEE--EEEEEEECCCCC-----------SSC--CEEEC-
T ss_pred             EeeccchHHHHHh--hhcccceEEEEecCCccchHHHH-HHHhh--ccceEEEecccc-----------ccc--cccHH-
Confidence            9987653 33332  23589999999887542  2232 88999  999999986421           100  11111 


Q ss_pred             hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc
Q psy9949         313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK  351 (383)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  351 (383)
                           ....++..+ .+.+..+.++++++++|+++|+++
T Consensus       136 -----~~~~k~~~i-~Gs~~g~~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         136 -----PYGLKAVSI-SYSALGSIKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             -----GGGCBSCEE-EECCCCCHHHHHHHHHHHHHTTCC
T ss_pred             -----HHHhCCcEE-EEEeeCCHHHHHHHHHHHHhCCCC
Confidence                 122333333 244456789999999999999875

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.86  E-value=1.7e-22  Score=169.20  Aligned_cols=118  Identities=21%  Similarity=0.298  Sum_probs=104.9

Q ss_pred             HhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCC
Q psy9949         163 AGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNE  241 (383)
Q Consensus       163 a~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~  241 (383)
                      ++++++++|||++|.+.+++    ++|++|||+||+|++|++++|+||..|++||+++++ ++.++++++|+++++++++
T Consensus         8 ~~lg~~glTA~~al~~~~~v----~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGV----KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKT   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCC----CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHhhHHHHHHHHHHHHhCC----CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhccccc
Confidence            46778999999999999999    999999999999999999999999999999999965 4678999999999999998


Q ss_pred             hHHHHHHhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         242 PEAMHSIAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       242 ~~~~~~i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .++.+++.+   ..|+|+|||++|++.....  +++++  ++|+++.+|.
T Consensus        84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~--~~~l~--~~G~~v~~G~  129 (182)
T d1v3va2          84 VNSLEEALKKASPDGYDCYFDNVGGEFLNTV--LSQMK--DFGKIAICGA  129 (182)
T ss_dssp             CSCHHHHHHHHCTTCEEEEEESSCHHHHHHH--GGGEE--EEEEEEECCC
T ss_pred             ccHHHHHHHHhhcCCCceeEEecCchhhhhh--hhhcc--CCCeEEeecc
Confidence            887776543   3689999999998766665  99999  9999999974

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.85  E-value=3.3e-22  Score=166.10  Aligned_cols=169  Identities=18%  Similarity=0.162  Sum_probs=125.6

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      +++.|++++|++.|||+++.+.+++    +++++|+|+| +|++|++++|+|+.+|++ |++++++ +++++++++|+++
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~----~~g~~VlI~G-~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~   76 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKV----TPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH   76 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCC----CTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCC----CCCCEEEEeC-CCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeE
Confidence            4678999999999999999888888    9999999999 699999999999999995 5555544 5678999999999


Q ss_pred             eeeCCChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhh
Q psy9949         236 VIDYNEPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKS  313 (383)
Q Consensus       236 v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (383)
                      ++++++.++.+++++.  +++|+||||+|++.....+ +++++  ++|+++.+|.+.....  ..+    .  ...+.. 
T Consensus        77 ~i~~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~-~~~~~--~~G~i~~~G~~~~~~~--~~~----~--~~~~~~-  144 (174)
T d1f8fa2          77 VINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQG-VDALG--ILGKIAVVGAPQLGTT--AQF----D--VNDLLL-  144 (174)
T ss_dssp             EEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHH-HHTEE--EEEEEEECCCCSTTCC--CCC----C--HHHHHH-
T ss_pred             EEeCCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHH-Hhccc--CceEEEEEeecCCCcc--ccc----C--HHHHHH-
Confidence            9999998899888764  5799999999998765554 89999  9999999864211110  000    0  111111 


Q ss_pred             hhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC
Q psy9949         314 NFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ  349 (383)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  349 (383)
                         ++..++|...  + ....+++++++++++++|+
T Consensus       145 ---k~~~i~Gs~~--g-~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         145 ---GGKTILGVVE--G-SGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             ---TTCEEEECSG--G-GSCHHHHHHHHHHHHHTTS
T ss_pred             ---CCCEEEEEEe--c-CCChHHHHHHHHHHHHcCC
Confidence               2223333211  0 0112678999999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.85  E-value=1e-21  Score=162.43  Aligned_cols=166  Identities=22%  Similarity=0.297  Sum_probs=129.4

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCe
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      +|+++||+++++++|||++++ ..++    +++++|+|+| +|++|++++++|+..|++|++++.+ +++++++++|++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~-~~~~----~~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~   74 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALK-VTGA----KPGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL   74 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HHTC----CTTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCC----CCCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcce
Confidence            589999999999999999997 6778    9999999998 7999999999999999999999854 5778999999999


Q ss_pred             eeeCCChHHHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhh
Q psy9949         236 VIDYNEPEAMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSN  314 (383)
Q Consensus       236 v~~~~~~~~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (383)
                      ++++++.++.+.+.+. .+.+.+++++++......+ +++++  ++|+++.+|.+.           +..  .+++..  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a-~~~l~--~~G~i~~~g~~~-----------~~~--~~~~~~--  136 (168)
T d1rjwa2          75 VVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSA-YNSIR--RGGACVLVGLPP-----------EEM--PIPIFD--  136 (168)
T ss_dssp             EECTTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHH-HHHEE--EEEEEEECCCCS-----------SEE--EEEHHH--
T ss_pred             ecccccchhhhhcccccCCCceEEeecCCHHHHHHH-HHHhc--cCCceEeccccc-----------CCC--CCCHHH--
Confidence            9999998888887754 4667777777777655554 89999  999999986421           111  111111  


Q ss_pred             hccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc
Q psy9949         315 FESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK  351 (383)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  351 (383)
                          ...++..+. ++...++++++++++++++|+++
T Consensus       137 ----~~~~~~~i~-gs~~~~~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         137 ----TVLNGIKII-GSIVGTRKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ----HHHTTCEEE-ECCSCCHHHHHHHHHHHHTTSCC
T ss_pred             ----HHHCCcEEE-EEeeCCHHHHHHHHHHHHhCCCC
Confidence                122333332 34445789999999999999875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=2.6e-21  Score=160.01  Aligned_cols=120  Identities=29%  Similarity=0.356  Sum_probs=103.5

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCe
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      ++++|||+++++++|||++|+ .+++    +++++|+|+||+|++|++++|+||.+|++|++++++ ++.+.++++|+++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~----~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~   75 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQA----RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE   75 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTC----CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCC----CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccce
Confidence            589999999999999999997 5888    999999999999999999999999999999999955 5678999999999


Q ss_pred             eeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         236 VIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       236 v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ++|+.+  ....+....|+|+|||++|. .....  +++++  ++|+++.+|.
T Consensus        76 ~i~~~~--~~~~~~~~~g~D~v~d~~G~-~~~~~--~~~l~--~~G~~v~~G~  121 (171)
T d1iz0a2          76 AATYAE--VPERAKAWGGLDLVLEVRGK-EVEES--LGLLA--HGGRLVYIGA  121 (171)
T ss_dssp             EEEGGG--HHHHHHHTTSEEEEEECSCT-THHHH--HTTEE--EEEEEEEC--
T ss_pred             eeehhh--hhhhhhccccccccccccch-hHHHH--HHHHh--cCCcEEEEeC
Confidence            999864  34555666799999999884 44444  89999  9999999864

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=2.1e-21  Score=162.56  Aligned_cols=166  Identities=16%  Similarity=0.227  Sum_probs=125.0

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      +++.+|.+.|+++|||+++.+.+++    ++|++|+|+| +|++|++++|+|+.+|+ +|++++++ +++++++++|++.
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~----~~G~~VlV~G-aG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~   76 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPES----FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL   76 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSC----CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSE
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCC----CCCCEEEEEC-CCccchhheecccccccccccccccccccccccccccceE
Confidence            4677889999999999999888888    9999999999 69999999999999999 89999855 5779999999999


Q ss_pred             eeeCCChHHHHH---Hhc---CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949         236 VIDYNEPEAMHS---IAG---AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD  309 (383)
Q Consensus       236 v~~~~~~~~~~~---i~~---~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  309 (383)
                      ++++++.++.+.   +.+   ..|+|+||||+|++.....+ +++++  ++|+++.+|......           ...++
T Consensus        77 vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a-~~~l~--~~G~iv~~G~~~~~~-----------~~~~~  142 (182)
T d1vj0a2          77 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEG-SELLR--RGGFYSVAGVAVPQD-----------PVPFK  142 (182)
T ss_dssp             EEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHH-HHHEE--EEEEEEECCCCSCCC-----------CEEEC
T ss_pred             EEeccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHH-HHHhc--CCCEEEEEeecCCCC-----------ccccc
Confidence            999988665443   332   35799999999998765544 89999  999999986421110           00011


Q ss_pred             HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcC
Q psy9949         310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERG  348 (383)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  348 (383)
                      ....     +..++..+ .+....+.+++++++++++++
T Consensus       143 ~~~~-----l~~k~l~i-~G~~~~~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         143 VYEW-----LVLKNATF-KGIWVSDTSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHH-----TTTTTCEE-EECCCCCHHHHHHHHHHHHTC
T ss_pred             cHHH-----HHHCCcEE-EEEEeCCHHHHHHHHHHHHHC
Confidence            1111     12233333 244455788999999999876

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.84  E-value=1.8e-20  Score=155.21  Aligned_cols=163  Identities=20%  Similarity=0.246  Sum_probs=122.9

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhh-hcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCC
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITA-ALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~-~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      .+.++|+++++++|||+++.+.. .+    +++++|+|+| +|++|++++|+|+.+|+ +|++++++ +++++++++|++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~----~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~   79 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTL----YPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGAD   79 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTC----CTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCS
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhcc----CCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccc
Confidence            36789999999999999998655 46    8999999999 79999999999999998 66666654 567899999999


Q ss_pred             eeeeCCChHHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhh
Q psy9949         235 LVIDYNEPEAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLK  312 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (383)
                      .++++++.++...+..  ..++|++|||+|+......+ +++++  ++|+++.+|...           ..   .+++. 
T Consensus        80 ~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a-~~~l~--~~G~iv~~G~~~-----------~~---~~~~~-  141 (172)
T d1h2ba2          80 HVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYT-PYLLG--RMGRLIIVGYGG-----------EL---RFPTI-  141 (172)
T ss_dssp             EEEETTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHG-GGGEE--EEEEEEECCCSS-----------CC---CCCHH-
T ss_pred             eeecCcccHHHHHHHhhCCCCceEEEEecCcchHHHHH-HHHHh--CCCEEEEEeCcc-----------cc---cCCHH-
Confidence            9999988766554443  35799999999998765544 99999  999999986311           00   01111 


Q ss_pred             hhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCC
Q psy9949         313 SNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQ  349 (383)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  349 (383)
                       .+    ..++..+ .+++..+.++++++++++++|+
T Consensus       142 -~l----~~k~~~i-~Gs~~~~~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         142 -RV----ISSEVSF-EGSLVGNYVELHELVTLALQGK  172 (172)
T ss_dssp             -HH----HHTTCEE-EECCSCCHHHHHHHHHHHHTTS
T ss_pred             -HH----HhCCcEE-EEEEecCHHHHHHHHHHHHcCC
Confidence             11    1222222 2334457889999999999986

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.83  E-value=3.2e-21  Score=159.59  Aligned_cols=123  Identities=17%  Similarity=0.118  Sum_probs=103.2

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEec-CchHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCS-GDAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~-~~~~~~~~~lg~~~  235 (383)
                      +++.||++.|++.|+|+++.+.+++    ++|++|+|+| +|++|++++|+|+.+|+ +|++++. ++++++++++|++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v----~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~   76 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKV----TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD   76 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCC----CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCc
Confidence            5789999999999999999878999    9999999998 89999999999999999 7777774 45789999999999


Q ss_pred             eeeCCChH-HHHHHh---cCCCccEEEEcCCCCcccccccccccccCCC-ceEEEecC
Q psy9949         236 VIDYNEPE-AMHSIA---GAGPYDVILDAAGIPLDQINSYLPFLKTGKF-SKFVTLRS  288 (383)
Q Consensus       236 v~~~~~~~-~~~~i~---~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~-G~~v~~~~  288 (383)
                      +++++..+ ....+.   ..+|+|++|||+|++.....+ +++++  ++ |+++.+|.
T Consensus        77 ~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a-~~~~~--~g~G~~v~vG~  131 (174)
T d1e3ia2          77 CLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAA-VDCTV--LGWGSCTVVGA  131 (174)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHH-HHTBC--TTTCEEEECCC
T ss_pred             ccCCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHH-HHHhh--cCCeEEEecCC
Confidence            98865422 222222   346899999999998876665 88888  85 99999864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.83  E-value=1.5e-21  Score=164.38  Aligned_cols=124  Identities=18%  Similarity=0.171  Sum_probs=103.6

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEE-cCCchHHHHHHHHHHHCCCEEEEEecC-ch----HHHHHh
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVL-GASGGVGTMAVQLLKAWDIEVVTTCSG-DA----KDLVTS  230 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~-ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~----~~~~~~  230 (383)
                      +|+++||+++++++|||++|.+..++    ++|++|+|+ ||+|++|++++|+||.+|++||++++. ++    .+.+++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~----~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~   76 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKL----TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE   76 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCC----CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCC----CCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhh
Confidence            58999999999999999999988898    999988886 778999999999999999999999844 22    346789


Q ss_pred             cCCCeeeeCCChH---HHHHHhc-----CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         231 LNPNLVIDYNEPE---AMHSIAG-----AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       231 lg~~~v~~~~~~~---~~~~i~~-----~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +|+++++++++.+   +.+.+++     .+++|++||++|++.....  +++++  ++|++|.+|.
T Consensus        77 lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~--~~~l~--~~G~~v~~G~  138 (189)
T d1gu7a2          77 LGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGI--ARKLN--NNGLMLTYGG  138 (189)
T ss_dssp             HTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHH--HHTSC--TTCEEEECCC
T ss_pred             ccccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhh--hhhhc--CCcEEEEECC
Confidence            9999999876533   3333332     3579999999998877666  89999  9999999864

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.9e-21  Score=163.40  Aligned_cols=123  Identities=21%  Similarity=0.294  Sum_probs=101.6

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-ch-HHHHHhc
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRD--KRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DA-KDLVTSL  231 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~--~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~-~~~~~~l  231 (383)
                      +|+.+.| ++.+++|||++|.+.+++    ++|  ++|||+||+|++|++++|+||.+|+ +|++++++ ++ .++++++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~----~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~   76 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHI----SAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL   76 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCC----CTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCC----CCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc
Confidence            3444443 667899999999988888    877  8899999999999999999999999 45555644 33 3466789


Q ss_pred             CCCeeeeCCChHHHHHHhcC--CCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         232 NPNLVIDYNEPEAMHSIAGA--GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       232 g~~~v~~~~~~~~~~~i~~~--~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      |++.++|++++++.+.+++.  .|+|+|||++|++.....  +++++  ++|+++.+|.
T Consensus        77 gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~~~~~--~~~l~--~~G~iv~~G~  131 (187)
T d1vj1a2          77 GFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTV--ISQMN--ENSHIILCGQ  131 (187)
T ss_dssp             CCSEEEETTSSCHHHHHHHHCTTCEEEEEESSCHHHHHHH--HTTEE--EEEEEEEC--
T ss_pred             cceEEeeccchhHHHHHHHHhccCceEEEecCCchhHHHH--hhhcc--ccccEEEecc
Confidence            99999999999999888764  589999999998877666  99999  9999999864

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.82  E-value=1.1e-20  Score=156.52  Aligned_cols=123  Identities=20%  Similarity=0.136  Sum_probs=100.1

Q ss_pred             HHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCee
Q psy9949         159 DEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLV  236 (383)
Q Consensus       159 ~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v  236 (383)
                      |.|||++.|++.|||+++.+.+++    ++|++|+|+| +|++|++++|+|+++|+ +|++++++ +++++++++|++++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~----~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~   76 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKV----TPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC   76 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCC----CCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEE
Confidence            467999999999999999878888    9999999999 79999999999999998 88888854 57899999999999


Q ss_pred             eeCCChH--HHHHHh--cCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         237 IDYNEPE--AMHSIA--GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       237 ~~~~~~~--~~~~i~--~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +|+++.+  ..+...  ..+|+|++||++|+......+ +..+.. ++|+++.+|.
T Consensus        77 i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~-~~~~~~-~~G~~v~vG~  130 (174)
T d1p0fa2          77 LNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNA-LQSTYC-GSGVTVVLGL  130 (174)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH-HHTBCT-TTCEEEECCC
T ss_pred             EcCCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHH-HHHHHH-hcCceEEEEE
Confidence            9876543  232222  346899999999998775554 555540 4699999864

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.82  E-value=1.2e-20  Score=156.98  Aligned_cols=122  Identities=16%  Similarity=0.062  Sum_probs=100.5

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      ++++||+++|++.|||+++.+.+++    ++|++|+|+| +|++|++++|+|+.+|+ +|++++++ +++++++++|+++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~----~~G~tVlI~G-aGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~   76 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKL----EPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE   76 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCC----CCCCEEEEec-chhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcE
Confidence            5789999999999999999878899    9999999999 68999999999999998 77777755 5678999999999


Q ss_pred             eeeCCC--hHHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEec
Q psy9949         236 VIDYNE--PEAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       236 v~~~~~--~~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ++++.+  ....+.+++  .+|+|++||++|++.....+ ..+++  ++|+++.++
T Consensus        77 ~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~-~~~~~--~g~~~~~v~  129 (176)
T d2fzwa2          77 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAA-LEACH--KGWGVSVVV  129 (176)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH-HHTBC--TTTCEEEEC
T ss_pred             EEeCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHH-HHhhc--CCceeEEEE
Confidence            998754  333344433  35899999999998776653 77777  888877764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=5.8e-22  Score=164.13  Aligned_cols=124  Identities=22%  Similarity=0.265  Sum_probs=103.1

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHH---hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQI---TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLN  232 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~---~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg  232 (383)
                      +|+.+||+++++++|||+++..   ....    +++++|||+||+|++|++++|+||.+|++||+++++ ++.+.++++|
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~----~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lG   76 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVR----PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLG   76 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC----GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHT
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCC----CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhc
Confidence            5899999999999999987653   2332    345699999999999999999999999999999965 5678899999


Q ss_pred             CCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         233 PNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       233 ~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      +++++++++.++.+.+. ....|.++|++|++.....  +++++  ++|+++.+|..
T Consensus        77 ad~vi~~~~~~~~~~l~-~~~~~~vvD~Vgg~~~~~~--l~~l~--~~Griv~~G~~  128 (177)
T d1o89a2          77 ASRVLPRDEFAESRPLE-KQVWAGAIDTVGDKVLAKV--LAQMN--YGGCVAACGLA  128 (177)
T ss_dssp             EEEEEEGGGSSSCCSSC-CCCEEEEEESSCHHHHHHH--HHTEE--EEEEEEECCCT
T ss_pred             cccccccccHHHHHHHH-hhcCCeeEEEcchHHHHHH--HHHhc--cccceEeeccc
Confidence            99999998766554332 2457999999999887766  99999  99999999753

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=6.6e-20  Score=151.70  Aligned_cols=164  Identities=15%  Similarity=0.098  Sum_probs=121.5

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      +|+++||.+. ++.+|||+++ ++++    +++++|+|+| +|++|++++|+|+.+|+ +|++++++ +++++++++|++
T Consensus         1 vS~e~Aal~e-pla~a~~a~~-~~~~----~~gd~VlI~G-~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~   73 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHACR-RGGV----TLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD   73 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHHH-HHTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS
T ss_pred             CCHHHHHHHH-HHHHHHHHHH-HhCC----CCCCEEEEEC-CCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCc
Confidence            5789999775 5567999997 7788    9999999998 79999999999999999 89999855 577899999999


Q ss_pred             eeeeCCChHHHHHHh-----cCCCccEEEEcCCCCcccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHH
Q psy9949         235 LVIDYNEPEAMHSIA-----GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFD  309 (383)
Q Consensus       235 ~v~~~~~~~~~~~i~-----~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~  309 (383)
                      .++++++.++.+..+     ...++|++|||+|++.....+ +++++  ++|+++.+|.+....             .++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a-~~~~~--~gG~iv~~G~~~~~~-------------~~~  137 (171)
T d1pl8a2          74 LVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG-IYATR--SGGTLVLVGLGSEMT-------------TVP  137 (171)
T ss_dssp             EEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHH-HHHSC--TTCEEEECSCCCSCC-------------CCC
T ss_pred             ccccccccccccccccccccCCCCceEEEeccCCchhHHHH-HHHhc--CCCEEEEEecCCCCC-------------ccC
Confidence            999887766544332     135899999999998775654 89999  999999986432110             011


Q ss_pred             HhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHHcCCcc
Q psy9949         310 LLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIERGQIK  351 (383)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  351 (383)
                      +... +.+++.++|.      +. +.++++++++++++|++.
T Consensus       138 ~~~~-~~k~l~i~Gs------~~-~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         138 LLHA-AIREVDIKGV------FR-YCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             HHHH-HHTTCEEEEC------CS-CSSCHHHHHHHHHTTSCC
T ss_pred             HHHH-HHCCcEEEEE------eC-CHhHHHHHHHHHHcCCCC
Confidence            1111 1123333332      22 345788999999999863

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.80  E-value=2.2e-19  Score=148.43  Aligned_cols=122  Identities=18%  Similarity=0.190  Sum_probs=99.6

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCe
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      +|+++||.+. ++.+||++++ .+++    +++++|+|+| +|++|++++|+|+.+|++|++++++ ++.++++++|++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~~-~~~~----~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~   73 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHACR-RAGV----QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV   73 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHHH-HHTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHH-HHHHHHHHHH-HhCC----CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcE
Confidence            5789999875 4567999997 6788    9999999998 8999999999999999999999965 5778999999987


Q ss_pred             eeeCCC--h---HHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         236 VIDYNE--P---EAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       236 v~~~~~--~---~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      +++++.  .   +..+.+.+  ..++|++|||+|++.....+ +++++  ++|+++.+|.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a-~~~~~--~~G~iv~~G~  130 (170)
T d1e3ja2          74 TLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIG-INITR--TGGTLMLVGM  130 (170)
T ss_dssp             EEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHH-HHHSC--TTCEEEECSC
T ss_pred             EEeccccccccchhhhhhhcccccCCceeeecCCChHHHHHH-HHHHh--cCCceEEEec
Confidence            765443  2   23344443  35799999999998765554 89999  9999999864

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.79  E-value=7.5e-20  Score=151.68  Aligned_cols=123  Identities=14%  Similarity=0.141  Sum_probs=102.7

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe-cCchHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTC-SGDAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~-~~~~~~~~~~lg~~~  235 (383)
                      ++++||.++|++.|+|+++.+.+++    ++|++|+|+| +|++|++++|+++.+|+ +|++++ +++++++++++|+++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~----~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~   77 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKV----KPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE   77 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCC----CCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcE
Confidence            4899999999999999999878888    9999999999 79999999999999997 899999 456889999999999


Q ss_pred             eeeCCChHH-HHHHh---cCCCccEEEEcCCCCccccccccccc-ccCCCceEEEecC
Q psy9949         236 VIDYNEPEA-MHSIA---GAGPYDVILDAAGIPLDQINSYLPFL-KTGKFSKFVTLRS  288 (383)
Q Consensus       236 v~~~~~~~~-~~~i~---~~~g~d~v~d~~g~~~~~~~~~~~~l-~~~~~G~~v~~~~  288 (383)
                      ++|+++.+. .+.+.   ...|+|+++|++|+......+ +..+ +  .+|+++.+|.
T Consensus        78 ~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a-~~~~~~--~~G~~v~vG~  132 (176)
T d1d1ta2          78 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDA-LASCHM--NYGTSVVVGV  132 (176)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHH-HTTSCT--TTCEEEECSC
T ss_pred             EECccccchHHHHHHHHhccccceEEEEeCCchHHHHHH-HHHhhc--CCeEEEEEEc
Confidence            998776442 33332   346899999999998765554 4444 4  5599999864

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.78  E-value=9.3e-19  Score=145.40  Aligned_cols=121  Identities=13%  Similarity=0.128  Sum_probs=98.0

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      ++++||+++|+++|||+++.+.+++    ++|++|+|+| +|++|++++++++..|+ +|++++++ +++++++++|+++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~v----k~GdtVlV~G-aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~   76 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKV----TQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE   76 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCC----CCCCEEEEEC-CCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCee
Confidence            5789999999999999999888999    9999999999 68999999999999997 88888854 5788999999999


Q ss_pred             eeeCCC-hHH-HHHHh--cCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         236 VIDYNE-PEA-MHSIA--GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       236 v~~~~~-~~~-~~~i~--~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ++++.+ ++. .+...  ..+|+|++||++|.+.....+ +.+++  ++|..+.+
T Consensus        77 ~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a-~~~~~--~~~g~~~~  128 (176)
T d2jhfa2          77 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTA-LSCCQ--EAYGVSVI  128 (176)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH-HHHBC--TTTCEEEE
T ss_pred             EEecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHH-HHHHh--cCCcceEE
Confidence            987654 222 22222  346899999999998876654 67777  76544444

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.77  E-value=1.8e-18  Score=143.45  Aligned_cols=121  Identities=17%  Similarity=0.091  Sum_probs=98.5

Q ss_pred             CHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCe
Q psy9949         158 SDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNL  235 (383)
Q Consensus       158 ~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~  235 (383)
                      ++++||+++|++.|+|+++.+.+++    +++++|+|+| +|++|++++++++..|+ +|++++++ +++++++++|+++
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~----k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~   76 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKV----EPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD   76 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCC----CCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcE
Confidence            5789999999999999999878899    9999999999 79999999999999988 88888855 5789999999999


Q ss_pred             eeeCCChH-HHHHHh---cCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         236 VIDYNEPE-AMHSIA---GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       236 v~~~~~~~-~~~~i~---~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ++|+++.+ ..+++.   ..+|+|+++|++|+......+ ..++.  ++|..+.+
T Consensus        77 ~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a-~~~~~--~g~~~~~~  128 (175)
T d1cdoa2          77 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNA-LESCL--KGWGVSVL  128 (175)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHH-HHTBC--TTTCEEEE
T ss_pred             EEcCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHH-HHHhh--CCCcceeE
Confidence            99987643 233333   346899999999998775553 56666  66555544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.73  E-value=7e-18  Score=141.88  Aligned_cols=121  Identities=15%  Similarity=0.037  Sum_probs=102.9

Q ss_pred             HHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHHHHHhcCCCeee
Q psy9949         160 EEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKDLVTSLNPNLVI  237 (383)
Q Consensus       160 ~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~~~~~lg~~~v~  237 (383)
                      ++.+++...+.|||++++ .+++    ++|++|+|+| +|++|++++++|+.+|+ +|++++++ +++++++++|+++++
T Consensus         2 ~d~~~l~d~~~ta~~a~~-~a~v----~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~   75 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAV-TAGV----GPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD   75 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHH-HTTC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEE
T ss_pred             chHHhcccHHHHHHHHHH-HhCC----CCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEE
Confidence            577888899999999986 7898    9999999998 79999999999999999 88888855 578999999999999


Q ss_pred             eCCChHHHHHHhc---CCCccEEEEcCCCCc---------------ccccccccccccCCCceEEEecCC
Q psy9949         238 DYNEPEAMHSIAG---AGPYDVILDAAGIPL---------------DQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       238 ~~~~~~~~~~i~~---~~g~d~v~d~~g~~~---------------~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ++.+.++.+++.+   ..|+|++||++|.+.               ....+ +++++  ++|+++.+|.+
T Consensus        76 ~~~~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~-~~~~r--~gG~v~~~G~~  142 (195)
T d1kola2          76 LSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSL-MQVTR--VAGKIGIPGLY  142 (195)
T ss_dssp             TTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHH-HHHEE--EEEEEEECSCC
T ss_pred             eCCCcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHH-HHHHh--cCCEEEEeeec
Confidence            9988888877765   458999999999642               22322 78889  99999999754

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.72  E-value=1.1e-18  Score=142.72  Aligned_cols=113  Identities=24%  Similarity=0.279  Sum_probs=90.2

Q ss_pred             HHHHHHHHH---HHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCCh
Q psy9949         167 YTGLTAWSA---LQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEP  242 (383)
Q Consensus       167 ~~~~tA~~~---l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~  242 (383)
                      ++++|||.+   |.+....    +++++|||+||+|++|++++|+||.+|++|++++++ ++.++++++|++.++++++.
T Consensus         3 ~aGlTA~~a~~~L~~~g~~----~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~   78 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLS----PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDV   78 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCC----GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHH
T ss_pred             ChHHHHHHHHHHHHHhcCC----CCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccch
Confidence            456677644   5544444    678899999999999999999999999999999965 57899999999999887532


Q ss_pred             HHHHHHhc--CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         243 EAMHSIAG--AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       243 ~~~~~i~~--~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      . .+.+..  ..++|+|||++|+......  +++++  ++|+++.+|.
T Consensus        79 ~-~~~~~~~~~~gvd~vid~vgg~~~~~~--~~~l~--~~G~iv~~G~  121 (167)
T d1tt7a2          79 Y-DGTLKALSKQQWQGAVDPVGGKQLASL--LSKIQ--YGGSVAVSGL  121 (167)
T ss_dssp             C-SSCCCSSCCCCEEEEEESCCTHHHHHH--HTTEE--EEEEEEECCC
T ss_pred             h-chhhhcccCCCceEEEecCcHHHHHHH--HHHhc--cCceEEEeec
Confidence            1 122222  2479999999999887777  99999  9999999964

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.66  E-value=3.2e-16  Score=124.55  Aligned_cols=134  Identities=16%  Similarity=0.266  Sum_probs=101.4

Q ss_pred             ceeeEEEeec--CCC--ceeEeeccccCCCCCCCeEEEEEEEEeeChhhHHHhccCCcchhhhhhcccccCCCCCCCCCc
Q psy9949          26 RTAAWQISSY--GGA--DELQFNDNVKTPILKSKDVLVEMKAVSVNPIDVAMLGGYGNVVLNSLRQLETCSVEPVLEFPL  101 (383)
Q Consensus        26 ~~~a~~~~~~--g~~--~~l~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~  101 (383)
                      ..|+|++.+.  |.|  +.|+++ +.++|+|++||||||+++.++++.....+..                    .....
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~-e~~ip~~~~gevLvk~~~~svDp~~R~~~~~--------------------~~~g~   61 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIASKR--------------------LKEGA   61 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHGGG--------------------SCTTS
T ss_pred             ccEEEEEccCCCCCCcccceEEE-EEECCCCCCCEEEEEEEEEeEcccccccccc--------------------cccCC
Confidence            5788998875  554  459999 8999999999999999999999864432211                    22234


Q ss_pred             cccCceeEEEEecCCCCCCCCCCCEEEEeecCCCCCCceEEEeecCcccccCCCCCCHH-----HHHhhhHHHHHH-HHH
Q psy9949         102 TLGRDFCGKIVAKGPRVTDLNIDDVVYGVIQPHKQGSFSKLILADSALVHKKPSNISDE-----EAAGVLYTGLTA-WSA  175 (383)
Q Consensus       102 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~~~~-----~aa~l~~~~~tA-~~~  175 (383)
                      ++..+++|+|++  ++.++|++||+|++.      ++|+||.+++.+.+.++|+.++..     ..+++...++|| |.+
T Consensus        62 ~~~g~~vg~Vv~--S~~~~f~~GD~V~g~------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~g  133 (147)
T d1v3va1          62 VMMGQQVARVVE--SKNSAFPAGSIVLAQ------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIE  133 (147)
T ss_dssp             BCCCCEEEEEEE--ESCTTSCTTCEEEEC------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHH
T ss_pred             ccccceEEEEEE--eCCCcccCCCEEEEc------cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHH
Confidence            566688999998  777889999999876      679999999999999998765433     344566667774 546


Q ss_pred             HHHhhhcCccCCCCCEEEE
Q psy9949         176 LQITAALGLVYPRDKRVLV  194 (383)
Q Consensus       176 l~~~~~~~~~~~~~~~VlI  194 (383)
                      |...  -    +.|++|++
T Consensus       134 l~~~--~----k~Getvv~  146 (147)
T d1v3va1         134 MLNG--A----NLGKAVVT  146 (147)
T ss_dssp             HHTT--C----CSSEEEEE
T ss_pred             hhCC--C----CCCCEEEe
Confidence            6433  3    78999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=9.7e-15  Score=101.49  Aligned_cols=73  Identities=30%  Similarity=0.444  Sum_probs=64.1

Q ss_pred             CCHHHHHhhhHHHHHHHHHHHHh---hhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcC
Q psy9949         157 ISDEEAAGVLYTGLTAWSALQIT---AALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLN  232 (383)
Q Consensus       157 ~~~~~aa~l~~~~~tA~~~l~~~---~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg  232 (383)
                      +|++||+.++++++|||.++...   ...    +++++|+|+||+|++|.+++|+++.+|++|+++++ +++.++++++|
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~----~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lG   76 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVR----PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLG   76 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC----GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHT
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhc----cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCC
Confidence            58999999999999999887643   334    68899999999999999999999999999999985 56789999988


Q ss_pred             C
Q psy9949         233 P  233 (383)
Q Consensus       233 ~  233 (383)
                      +
T Consensus        77 A   77 (77)
T d1o8ca2          77 A   77 (77)
T ss_dssp             E
T ss_pred             C
Confidence            5

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.64  E-value=9.7e-05  Score=62.73  Aligned_cols=77  Identities=22%  Similarity=0.321  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCee-eeCCChHHHH----HHh-cCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLV-IDYNEPEAMH----SIA-GAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v-~~~~~~~~~~----~i~-~~~g~d~v~d~  260 (383)
                      +|+++||+||++++|.++++.+...|++|+...++ +..+.+++.+...+ .|..+.+-.+    ++. +.+++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   83 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN   83 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence            78999999999999999999999999999999965 45566677665433 3555533222    222 24789999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus        84 AG~~   87 (248)
T d2d1ya1          84 AAIA   87 (248)
T ss_dssp             CCCC
T ss_pred             CcCC
Confidence            9863

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=0.00017  Score=60.95  Aligned_cols=77  Identities=30%  Similarity=0.389  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee--eeCCChHHHHHHh-cCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV--IDYNEPEAMHSIA-GAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v--~~~~~~~~~~~i~-~~~g~d~v~d~~g  262 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +. +..++++....  .|..+.+..+++. +.+++|++++++|
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg   85 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence            789999999999999999999999999999999764 33 34455554322  4555544444443 4578999999998


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        86 ~~   87 (244)
T d1pr9a_          86 VA   87 (244)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=0.00019  Score=60.59  Aligned_cols=77  Identities=26%  Similarity=0.365  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee--eeCCChHHHHHH-hcCCCccEEEEcCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV--IDYNEPEAMHSI-AGAGPYDVILDAAG  262 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v--~~~~~~~~~~~i-~~~~g~d~v~d~~g  262 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +. +..++++....  .|..+.+..+++ .+.+++|++++++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            689999999999999999999999999999999764 33 34455543322  455555444443 34578999999998


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        84 ~~   85 (242)
T d1cyda_          84 LV   85 (242)
T ss_dssp             CC
T ss_pred             cc
Confidence            63

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.60  E-value=0.00012  Score=61.88  Aligned_cols=77  Identities=23%  Similarity=0.390  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee-eeCCChHHHHHH----h-cCCCccEEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV-IDYNEPEAMHSI----A-GAGPYDVILD  259 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v-~~~~~~~~~~~i----~-~~~g~d~v~d  259 (383)
                      +++++||+||++++|.++++.+...|++|+.+++++ +. +.++++++..+ .|..+.+-.+++    . +.+++|++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            689999999999999999999999999999999764 33 44566665433 455554333322    2 2368999999


Q ss_pred             cCCCC
Q psy9949         260 AAGIP  264 (383)
Q Consensus       260 ~~g~~  264 (383)
                      ++|..
T Consensus        84 nAG~~   88 (242)
T d1ulsa_          84 YAGIT   88 (242)
T ss_dssp             CCCCC
T ss_pred             CCccc
Confidence            99864

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.54  E-value=0.00014  Score=56.89  Aligned_cols=95  Identities=20%  Similarity=0.196  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CchHHHHHhcC-C-CeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS-GDAKDLVTSLN-P-NLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~-~~~~~~~~~lg-~-~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +..+|+|.| +|.+|+.|++.|+.+|+.|.+.+. .++++.+++.. . ......+...+.+.+.   ..|+||.++=.+
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~---~aDivI~aalip  106 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA---EADLLIGAVLVP  106 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH---TCSEEEECCCCT
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhc---cCcEEEEeeecC
Confidence            467899999 899999999999999999999994 45666555432 2 2233344445555554   589999987543


Q ss_pred             c-----ccccccccccccCCCceEEEecC
Q psy9949         265 L-----DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       265 ~-----~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .     .....+++.|+  ++..+|++..
T Consensus       107 G~~aP~lIt~~mv~~Mk--~GSVIVDvai  133 (168)
T d1pjca1         107 GRRAPILVPASLVEQMR--TGSVIVDVAV  133 (168)
T ss_dssp             TSSCCCCBCHHHHTTSC--TTCEEEETTC
T ss_pred             CcccCeeecHHHHhhcC--CCcEEEEeec
Confidence            2     21222278889  9999999843

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.46  E-value=0.00028  Score=59.25  Aligned_cols=74  Identities=28%  Similarity=0.377  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +++++||+||++++|.++++.+...|++|+.+++++  +.+++.+...+ .|..+ .......+.+.+|++++++|..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~--~~l~~~~~~~~~~Dv~~-~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--ELLKRSGHRYVVCDLRK-DLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHTCSEEEECCTTT-CHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--HHHHhcCCcEEEcchHH-HHHHHHHHhCCCcEEEeccccc
Confidence            679999999999999999999999999999998764  33444444322 23222 2222333457899999999864

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.44  E-value=0.0004  Score=56.22  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHh----cCC-CeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTS----LNP-NLVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~----lg~-~~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      ++++++|+||+|++|..+++.+...|++|+.++++. +.+ .+.+    ... ....|..+....++.  .+++|++|++
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~iDilin~   99 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA--VKGAHFVFTA   99 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH--TTTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHH--hcCcCeeeec
Confidence            789999999999999999999999999999999774 322 2222    222 233555553322222  3679999999


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      +|..
T Consensus       100 Ag~g  103 (191)
T d1luaa1         100 GAIG  103 (191)
T ss_dssp             CCTT
T ss_pred             Cccc
Confidence            8853

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.43  E-value=0.00022  Score=60.79  Aligned_cols=77  Identities=16%  Similarity=0.251  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      +|++++|+||++++|+++++.+...|++|+.+++++ +. +.+++++....   .|..+.+-.+.+    . +.+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            689999999999999999999999999999999664 33 45567775432   355554333322    2 23789999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus        84 VnnAg~~   90 (256)
T d1k2wa_          84 VNNAALF   90 (256)
T ss_dssp             EECCCCC
T ss_pred             Eeecccc
Confidence            9999863

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.40  E-value=0.00051  Score=54.40  Aligned_cols=98  Identities=23%  Similarity=0.233  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCchHHHHHhcCCCeee-eCCC-h------------------HHHH
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDAKDLVTSLNPNLVI-DYNE-P------------------EAMH  246 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~~~~~~~lg~~~v~-~~~~-~------------------~~~~  246 (383)
                      +.-+|+|+| +|.+|+.|+..|+.+|++|.+.+ +.++++.+++++...+. +... .                  ...+
T Consensus        28 ~pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            456899999 89999999999999999999999 66778888888765441 1000 0                  0111


Q ss_pred             HHhc-CCCccEEEEcCCCCc-----ccccccccccccCCCceEEEecC
Q psy9949         247 SIAG-AGPYDVILDAAGIPL-----DQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       247 ~i~~-~~g~d~v~d~~g~~~-----~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+ ....|+||-++=.+.     .....+++.|+  ++..+|++..
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk--~GSVIVDvai  152 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMK--PGSVIIDLAV  152 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSC--TTCEEEETTG
T ss_pred             HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcC--CCcEEEEEee
Confidence            1222 247999998764331     11222378889  9999999843

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.37  E-value=0.00031  Score=59.72  Aligned_cols=77  Identities=23%  Similarity=0.275  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +. +.+++++....   .|..+.+-.+++    . +.+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            689999999999999999999999999999999664 33 45566664322   344443322222    2 23789999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus        84 VnnAg~~   90 (254)
T d1hdca_          84 VNNAGIS   90 (254)
T ss_dssp             EECCCCC
T ss_pred             EecCccc
Confidence            9999863

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.34  E-value=0.00035  Score=58.97  Aligned_cols=77  Identities=25%  Similarity=0.303  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHH----HHHhc-CCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAM----HSIAG-AGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~----~~i~~-~~g~d~v  257 (383)
                      +|++++|+||++++|.++++.+...|++|+.+++++ +. +..++++....   .|..+.+-.    +++.+ .+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            789999999999999999999999999999999664 33 34455553221   344453322    22222 3689999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus        85 innAG~~   91 (244)
T d1nffa_          85 VNNAGIL   91 (244)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00027  Score=59.72  Aligned_cols=77  Identities=18%  Similarity=0.260  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH-HhcCCC-eeeeCCChHHHHHHh-cCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV-TSLNPN-LVIDYNEPEAMHSIA-GAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~-~~lg~~-~v~~~~~~~~~~~i~-~~~g~d~v~d~~g~  263 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +.+.+ +..+.. .+.|....+..+... ..+++|+++++.|.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~   84 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF   84 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccc
Confidence            789999999999999999999999999999999764 33333 334432 234555555554444 34689999999987


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      .
T Consensus        85 ~   85 (245)
T d2ag5a1          85 V   85 (245)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.31  E-value=0.00036  Score=59.23  Aligned_cols=77  Identities=26%  Similarity=0.342  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +. +..++++....   .|..+..-.+.+    . ..+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            689999999999999999999999999999998664 33 45566775433   233443322222    2 23789999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus        85 VnnAG~~   91 (253)
T d1hxha_          85 VNNAGIL   91 (253)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9999863

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=0.0003  Score=59.39  Aligned_cols=77  Identities=29%  Similarity=0.500  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCC---eeeeCCChHHHH----HHh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPN---LVIDYNEPEAMH----SIA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~---~v~~~~~~~~~~----~i~-~~~g~d~v  257 (383)
                      +|++++|+||++++|.++++.+...|++|+.++++++ . +.+++++..   ...|..+.+-.+    .+. +.+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            6899999999999999999999999999999987653 3 344555533   224555533222    222 34789999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus        83 VnnAg~~   89 (243)
T d1q7ba_          83 VNNAGIT   89 (243)
T ss_dssp             EECCCCC
T ss_pred             hhhhhhc
Confidence            9998864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00047  Score=58.40  Aligned_cols=76  Identities=21%  Similarity=0.309  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCCee--eeCCChHHHHHH----h-cCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPNLV--IDYNEPEAMHSI----A-GAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v--~~~~~~~~~~~i----~-~~~g~d~v~  258 (383)
                      +|+++||+||++++|.++++.+...|++|+..++++ +.+ ..++++....  .|..+.+-.+++    . ..+++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            689999999999999999999999999999998764 333 3445543222  344443333322    2 236899999


Q ss_pred             EcCCC
Q psy9949         259 DAAGI  263 (383)
Q Consensus       259 d~~g~  263 (383)
                      +++|.
T Consensus        85 nnAG~   89 (250)
T d1ydea1          85 NNAGH   89 (250)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99984

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.29  E-value=0.00055  Score=57.96  Aligned_cols=77  Identities=26%  Similarity=0.318  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-----HHHHhcCCCee---eeCCChHHH----HHHh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-----DLVTSLNPNLV---IDYNEPEAM----HSIA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-----~~~~~lg~~~v---~~~~~~~~~----~~i~-~~~g  253 (383)
                      +|+++||+||++++|.++++.+...|++|+.++++++ .     ++.++.|....   .|..+.+-.    +++. +.++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999996643 2     23344565422   354443322    2222 2478


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        84 iDiLVnnAG~~   94 (251)
T d1vl8a_          84 LDTVVNAAGIN   94 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.28  E-value=0.00065  Score=57.36  Aligned_cols=77  Identities=17%  Similarity=0.349  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h--HHHHHhcCCCee---eeCCChHHHHHH----h-cCCCccE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A--KDLVTSLNPNLV---IDYNEPEAMHSI----A-GAGPYDV  256 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~--~~~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~d~  256 (383)
                      ++++++|+||++++|.++++.+...|++|+.+++++ +  .+.+++.|....   .|..+.+-.+.+    . +.+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            678999999999999999999999999999998654 2  234566665422   344444333332    2 2478999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +++++|..
T Consensus        84 lVnnAG~~   91 (247)
T d2ew8a1          84 LVNNAGIY   91 (247)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.00052  Score=58.28  Aligned_cols=77  Identities=18%  Similarity=0.282  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHHHH----h-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~  254 (383)
                      +|+++||+||++++|.++++.+...|++|+.+.+++ +.+    .+++.|....   .|..+.+-.+.+    . +.+++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999664 322    2344554322   344443333222    2 24789


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++++++|..
T Consensus        90 DilvnnAG~~   99 (255)
T d1fmca_          90 DILVNNAGGG   99 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             CEeeeCCcCC
Confidence            9999999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.23  E-value=0.00073  Score=57.51  Aligned_cols=76  Identities=24%  Similarity=0.258  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~----~i~-~~~g~  254 (383)
                      +|+++||+||++++|++++..+...|++|+.+++++ +.+    .+++.|....   .|..+.+-.+    .+. +.+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998664 332    2334454322   3444433222    222 24789


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++++++|.
T Consensus        84 DilVnnaG~   92 (260)
T d1zema1          84 DFLFNNAGY   92 (260)
T ss_dssp             CEEEECCCC
T ss_pred             Ceehhhhcc
Confidence            999999885

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.22  E-value=0.0004  Score=59.75  Aligned_cols=76  Identities=24%  Similarity=0.302  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCee---eeCCChHHHHHH----h-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLV---IDYNEPEAMHSI----A-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g~d~v  257 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +. +..++++....   .|..+.+..+.+    . +.+++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            689999999999999999999999999999999764 33 34455654322   344443332222    2 24789999


Q ss_pred             EEcCCC
Q psy9949         258 LDAAGI  263 (383)
Q Consensus       258 ~d~~g~  263 (383)
                      ++++|.
T Consensus        84 vnnAG~   89 (276)
T d1bdba_          84 IPNAGI   89 (276)
T ss_dssp             ECCCCC
T ss_pred             cccccc
Confidence            999984

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.21  E-value=0.00053  Score=57.72  Aligned_cols=77  Identities=23%  Similarity=0.388  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCee---eeCCChHHHH----HHh-cCCCccEE
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLV---IDYNEPEAMH----SIA-GAGPYDVI  257 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v---~~~~~~~~~~----~i~-~~~g~d~v  257 (383)
                      +|+++||+||++++|.++++-+...|++|+.+.++++ . +..++++.+..   .|..+.+-.+    .+. +.+++|+.
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            7899999999999999999999999999999997653 3 45577775532   2444433222    222 23789999


Q ss_pred             EEcCCCC
Q psy9949         258 LDAAGIP  264 (383)
Q Consensus       258 ~d~~g~~  264 (383)
                      ++++|..
T Consensus        84 innAg~~   90 (241)
T d2a4ka1          84 AHFAGVA   90 (241)
T ss_dssp             EEGGGGT
T ss_pred             ccccccc
Confidence            9988753

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.20  E-value=0.00073  Score=57.78  Aligned_cols=76  Identities=20%  Similarity=0.443  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCCC---ee--eeCCChHHHHHH----h-cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNPN---LV--IDYNEPEAMHSI----A-GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~~---~v--~~~~~~~~~~~i----~-~~~g~d  255 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +.+ .+++++..   ..  .|..+.+-.+.+    . +.+.+|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            789999999999999999999999999999999664 333 34444321   12  244443322222    2 247899


Q ss_pred             EEEEcCCC
Q psy9949         256 VILDAAGI  263 (383)
Q Consensus       256 ~v~d~~g~  263 (383)
                      ++++++|.
T Consensus        85 ~lVnnAG~   92 (268)
T d2bgka1          85 IMFGNVGV   92 (268)
T ss_dssp             EEEECCCC
T ss_pred             eecccccc
Confidence            99999985

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.17  E-value=0.00072  Score=57.57  Aligned_cols=77  Identities=18%  Similarity=0.297  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H----HHHHhcCCCee---eeCCChHHHHHH-----hcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K----DLVTSLNPNLV---IDYNEPEAMHSI-----AGAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~----~~~~~lg~~~v---~~~~~~~~~~~i-----~~~~g  253 (383)
                      +|++++|+||++++|.++++.+...|++|+.+.++.+  .    +.+++.|....   .|..+.+-.+++     .+.++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999996532  2    23344554322   344444333332     23478


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++++++|..
T Consensus        86 iDiLVnnAG~~   96 (261)
T d1geea_          86 LDVMINNAGLE   96 (261)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEeeccceec
Confidence            99999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.16  E-value=0.00069  Score=57.68  Aligned_cols=77  Identities=16%  Similarity=0.289  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-H----HHHhcCCCee---eeCCChHHHHHH----h-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-D----LVTSLNPNLV---IDYNEPEAMHSI----A-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~----~~~~lg~~~v---~~~~~~~~~~~i----~-~~~g  253 (383)
                      +|+++||+||++++|.++++.+...|++|+.+.+++ +. +    +.++.|....   .|..+.+-.+++    . +.++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999654 32 2    2334554422   355554433322    2 3478


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++++++|..
T Consensus        88 iDilVnnAg~~   98 (260)
T d1h5qa_          88 ISGLIANAGVS   98 (260)
T ss_dssp             EEEEEECCCCC
T ss_pred             CcEeccccccc
Confidence            99999999853

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.0013  Score=55.36  Aligned_cols=77  Identities=18%  Similarity=0.331  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCe---eeeCCChHHHH----HHh-cCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNL---VIDYNEPEAMH----SIA-GAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~---v~~~~~~~~~~----~i~-~~~g~  254 (383)
                      .|++++|+||++++|..++..+...|++|+.+++++ +.+    .+++.|...   ..|..+.+-.+    .+. +.+.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999888889999999999764 332    233455432   23555543222    222 34689


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++++++|..
T Consensus        86 dilinnag~~   95 (244)
T d1yb1a_          86 SILVNNAGVV   95 (244)
T ss_dssp             SEEEECCCCC
T ss_pred             ceeEeecccc
Confidence            9999999974

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.001  Score=56.41  Aligned_cols=77  Identities=22%  Similarity=0.301  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhc----CCCee----eeCCChHHHHH----Hh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSL----NPNLV----IDYNEPEAMHS----IA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~l----g~~~v----~~~~~~~~~~~----i~-~~~  252 (383)
                      .|+++||+||++++|.++++.+...|++|+.++++. +.+ ...++    +...+    .|..+.+-.+.    +. +.+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999664 322 22222    21112    35445332222    22 247


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++++++|..
T Consensus        82 ~iDilVnnAg~~   93 (254)
T d2gdza1          82 RLDILVNNAGVN   93 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CcCeeccccccc
Confidence            899999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.11  E-value=0.00088  Score=56.66  Aligned_cols=77  Identities=17%  Similarity=0.278  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHhcCC--C-ee--eeCCChHHHH----HHh-cCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTSLNP--N-LV--IDYNEPEAMH----SIA-GAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~lg~--~-~v--~~~~~~~~~~----~i~-~~~g~d  255 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +.+ .+++++.  . ..  .|..+.+-.+    ++. +.+++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            689999999999999999999999999999999664 333 3344332  1 12  3444443222    222 247899


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      ++++++|..
T Consensus        85 iLVnnAg~~   93 (251)
T d1zk4a1          85 TLVNNAGIA   93 (251)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.11  E-value=0.001  Score=57.64  Aligned_cols=77  Identities=16%  Similarity=0.286  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-H----HHHhcCCCee---eeCCChHHHHH----H-hcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-D----LVTSLNPNLV---IDYNEPEAMHS----I-AGAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~----~~~~lg~~~v---~~~~~~~~~~~----i-~~~~g  253 (383)
                      +|+++||+||++++|.+++..+...|++|+.+.+++. . +    +..+.|....   .|..+.+-.+.    + ...++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            5799999999999999999999999999999997642 2 2    2233444322   24444332222    2 23468


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++++++|..
T Consensus       104 iDilvnnAg~~  114 (294)
T d1w6ua_         104 PNIVINNAAGN  114 (294)
T ss_dssp             CSEEEECCCCC
T ss_pred             cchhhhhhhhc
Confidence            99999999864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.09  E-value=0.0014  Score=55.54  Aligned_cols=77  Identities=22%  Similarity=0.321  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHHH----Hhc-C-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMHS----IAG-A-GP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~~----i~~-~-~g  253 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +.+    ..++.+....   .|..+.+..++    +.+ . +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999764 322    3344554432   35555443332    222 3 45


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      .|++++++|..
T Consensus        85 idilinnag~~   95 (258)
T d1ae1a_          85 LNILVNNAGVV   95 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             cEEEecccccc
Confidence            89999999874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.05  E-value=0.0014  Score=55.57  Aligned_cols=76  Identities=22%  Similarity=0.354  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHHH----Hh-cCCCcc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMHS----IA-GAGPYD  255 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~~----i~-~~~g~d  255 (383)
                      |+.+||+||++++|+++++.+...|++|+.+++++ +.+    .+++.|....   .|..+.+-.+.    +. +.+++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            57789999999999999999999999999999764 222    2334554322   34444333322    22 347899


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      ++++++|..
T Consensus        82 ilVnnAG~~   90 (257)
T d2rhca1          82 VLVNNAGRP   90 (257)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.03  E-value=0.0012  Score=56.42  Aligned_cols=77  Identities=22%  Similarity=0.349  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCC--ee----eeCCChHHHHHH----h-cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPN--LV----IDYNEPEAMHSI----A-GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~--~v----~~~~~~~~~~~i----~-~~  251 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +.+    .+++.+..  .+    .|..+.+-.+.+    . +.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            688999999999999999999999999999999764 332    22333321  12    344454333222    2 24


Q ss_pred             CCccEEEEcCCCC
Q psy9949         252 GPYDVILDAAGIP  264 (383)
Q Consensus       252 ~g~d~v~d~~g~~  264 (383)
                      +++|++++++|..
T Consensus        84 g~iDilvnnAG~~   96 (272)
T d1xkqa_          84 GKIDVLVNNAGAA   96 (272)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCceEEEeCCccc
Confidence            7899999998863

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.03  E-value=0.0016  Score=55.32  Aligned_cols=76  Identities=21%  Similarity=0.270  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHH----HHhc-CCCee----eeCCChHHHHHH----h-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDL----VTSL-NPNLV----IDYNEPEAMHSI----A-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~----~~~l-g~~~v----~~~~~~~~~~~i----~-~~~  252 (383)
                      +|++++|+||++++|.++++.+...|++|+.+++++ +.+.    ..+. +...+    .|..+.+-.+.+    . +.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999664 3221    1122 22122    254454333222    2 247


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++++++|.
T Consensus        83 ~iDiLVnnAG~   93 (258)
T d1iy8a_          83 RIDGFFNNAGI   93 (258)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            89999999984

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.02  E-value=0.0012  Score=55.77  Aligned_cols=77  Identities=23%  Similarity=0.319  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCee---eeCCChHHH----HHH-hcCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLV---IDYNEPEAM----HSI-AGAGPY  254 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v---~~~~~~~~~----~~i-~~~~g~  254 (383)
                      +++++||+||++++|.++++.+...|++|+.+.++++ .+    .+++.|....   .|..+.+-.    +++ .+.+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            6789999999999999999988899999999997643 22    2344554322   344443322    222 234789


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      |++++++|..
T Consensus        89 Dilvnnag~~   98 (251)
T d2c07a1          89 DILVNNAGIT   98 (251)
T ss_dssp             CEEEECCCCC
T ss_pred             eeeeeccccc
Confidence            9999998863

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0019  Score=54.69  Aligned_cols=77  Identities=27%  Similarity=0.406  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCC-Cee----eeCCChHHH----HHHh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNP-NLV----IDYNEPEAM----HSIA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~-~~v----~~~~~~~~~----~~i~-~~~  252 (383)
                      +++++||+||++++|.+++..+...|++|+.+.+++ +.+ .   +++.+. ..+    .|-.+++-.    +.+. +.+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            688999999999999999999999999999999764 332 2   233332 222    244443322    2222 247


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus        89 ~iD~lVnnAg~~  100 (257)
T d1xg5a_          89 GVDICINNAGLA  100 (257)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEeccccc
Confidence            899999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.99  E-value=0.0011  Score=56.35  Aligned_cols=77  Identities=21%  Similarity=0.289  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-ch-H----HHHHhcCCCee---eeCCChHHH----HHHh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DA-K----DLVTSLNPNLV---IDYNEPEAM----HSIA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~-~----~~~~~lg~~~v---~~~~~~~~~----~~i~-~~~g  253 (383)
                      .|+++||+||++++|.++++.+...|++|+..++. ++ .    +..++.|.+..   .|..+.+-.    +++. +.++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999987743 32 2    23345665432   244443222    2222 2468


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++++++|..
T Consensus        85 idilinnag~~   95 (259)
T d1ja9a_          85 LDFVMSNSGME   95 (259)
T ss_dssp             EEEEECCCCCC
T ss_pred             CcEEEeccccc
Confidence            99999999974

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.98  E-value=0.0014  Score=55.74  Aligned_cols=77  Identities=23%  Similarity=0.382  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc--hHHH-----HHhcCCCee---eeCCChHHHHH----Hh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD--AKDL-----VTSLNPNLV---IDYNEPEAMHS----IA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~--~~~~-----~~~lg~~~v---~~~~~~~~~~~----i~-~~~  252 (383)
                      +|+++||+||++++|+++++.+...|++|+.+.+++  +.+.     ..+.|....   .|..+.+-.+.    +. +.+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            688999999999999999999999999999999653  2221     123344322   24444332322    22 237


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++|+++|..
T Consensus        83 ~iDiLVnnAG~~   94 (260)
T d1x1ta1          83 RIDILVNNAGIQ   94 (260)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCcEEEeecccc
Confidence            899999999864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.97  E-value=0.0014  Score=56.08  Aligned_cols=76  Identities=21%  Similarity=0.337  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCC--ee----eeCCChHHHHHH----h-cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPN--LV----IDYNEPEAMHSI----A-GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~--~v----~~~~~~~~~~~i----~-~~  251 (383)
                      +|++++|+||++++|.++++.+...|++|+.+++++ +.+    .+++.+..  .+    .|..+.+-.+.+    . +.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999764 332    22334322  22    354454333222    2 24


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++++++|.
T Consensus        83 G~iDilVnnAG~   94 (274)
T d1xhla_          83 GKIDILVNNAGA   94 (274)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeeccc
Confidence            689999999885

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0011  Score=57.48  Aligned_cols=77  Identities=16%  Similarity=0.257  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHHh----c----CCCee---eeCCChHHHHH----Hh-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVTS----L----NPNLV---IDYNEPEAMHS----IA-  249 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~~----l----g~~~v---~~~~~~~~~~~----i~-  249 (383)
                      +|+++||+||++++|.++++.+...|++|+++++++ +.+ .+++    +    +....   .|..+.+-.++    +. 
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999764 322 2222    1    22211   24444433322    22 


Q ss_pred             cCCCccEEEEcCCCC
Q psy9949         250 GAGPYDVILDAAGIP  264 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~  264 (383)
                      ..+++|++|+++|..
T Consensus        91 ~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          91 TFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCeEEEEeecccc
Confidence            236899999999863

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.91  E-value=0.0019  Score=54.71  Aligned_cols=77  Identities=21%  Similarity=0.237  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCCee---eeCCChHHH----HHHh-cCC-C
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPNLV---IDYNEPEAM----HSIA-GAG-P  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~~v---~~~~~~~~~----~~i~-~~~-g  253 (383)
                      +|+++||+||++++|.++++.+...|++|+..++++ +.+ .   +++.+....   .|..+.+-.    +++. +.+ .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999764 332 2   233343221   344443322    2332 234 5


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++++++|..
T Consensus        87 idilvnnAG~~   97 (259)
T d2ae2a_          87 LNILVNNAGIV   97 (259)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceEEEECCcee
Confidence            99999999863

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.90  E-value=0.0017  Score=55.45  Aligned_cols=77  Identities=17%  Similarity=0.245  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-h-H----HHHHhcCCCee---eeCCChHHH----HHHh-cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-A-K----DLVTSLNPNLV---IDYNEPEAM----HSIA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~-~----~~~~~lg~~~v---~~~~~~~~~----~~i~-~~~g  253 (383)
                      +|+++||+||++++|.++++.+...|++|+.++++. + .    +.+++.+.+..   .|..+.+..    +++. ..++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999988543 2 2    23345565433   244443222    2222 2368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|+++.++|..
T Consensus        97 idilV~nag~~  107 (272)
T d1g0oa_          97 LDIVCSNSGVV  107 (272)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCccccccccc
Confidence            99999998864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.90  E-value=0.0018  Score=55.04  Aligned_cols=76  Identities=20%  Similarity=0.292  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-H---HHhcCCC--ee----eeCCChHHHHHHh-----cC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-L---VTSLNPN--LV----IDYNEPEAMHSIA-----GA  251 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~---~~~lg~~--~v----~~~~~~~~~~~i~-----~~  251 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +.+ .   +++.+..  .+    .|..+.+-.+++.     +.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            688999999999999999999999999999999764 332 2   2233321  12    3555543333322     24


Q ss_pred             CCccEEEEcCCC
Q psy9949         252 GPYDVILDAAGI  263 (383)
Q Consensus       252 ~g~d~v~d~~g~  263 (383)
                      +++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            789999999885

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.004  Score=48.21  Aligned_cols=104  Identities=13%  Similarity=0.128  Sum_probs=70.6

Q ss_pred             HHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhc
Q psy9949         171 TAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       171 tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~  250 (383)
                      +.+.++.+..++.   -.|++++|.| -|-+|..+++.++.+|++|+++..+....+...+....+..     +.+.   
T Consensus         9 S~~~~~~r~t~~~---l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~-----~~~a---   76 (163)
T d1li4a1           9 SLIDGIKRATDVM---IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTT-----MDEA---   76 (163)
T ss_dssp             HHHHHHHHHHCCC---CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECC-----HHHH---
T ss_pred             hHHHHHHHHhCce---ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeee-----hhhh---
Confidence            3455555555441   4899999999 99999999999999999999999665444333333223321     2222   


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ....|+++-++|.........++.|+  ++..+..+|.
T Consensus        77 ~~~adivvtaTGn~~vI~~eh~~~MK--dgaIL~N~Gh  112 (163)
T d1li4a1          77 CQEGNIFVTTTGCIDIILGRHFEQMK--DDAIVCNIGH  112 (163)
T ss_dssp             TTTCSEEEECSSCSCSBCHHHHTTCC--TTEEEEECSS
T ss_pred             hhhccEEEecCCCccchhHHHHHhcc--CCeEEEEecc
Confidence            23579999999987654433478888  7777776654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.87  E-value=0.00046  Score=56.82  Aligned_cols=98  Identities=21%  Similarity=0.150  Sum_probs=68.3

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-----HHHHhcCCCeeeeCCChHHHHHHhcCCC
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-----DLVTSLNPNLVIDYNEPEAMHSIAGAGP  253 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-----~~~~~lg~~~v~~~~~~~~~~~i~~~~g  253 (383)
                      ..++    +++++||..|  ++.|..++.+++..|.+|+++...+..     +.++++|.+++.....+ ..+...+.+.
T Consensus        73 ~L~l----~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd-~~~g~~~~~p  145 (215)
T d1jg1a_          73 IANL----KPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD-GSKGFPPKAP  145 (215)
T ss_dssp             HHTC----CTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC-GGGCCGGGCC
T ss_pred             hhcc----CccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECc-cccCCcccCc
Confidence            5677    9999999998  567888899999888889999866532     34456787766322221 1111223467


Q ss_pred             ccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         254 YDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       254 ~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ||.|+-+.+....... +++.|+  ++|++|..
T Consensus       146 fD~Iiv~~a~~~ip~~-l~~qL~--~gGrLv~p  175 (215)
T d1jg1a_         146 YDVIIVTAGAPKIPEP-LIEQLK--IGGKLIIP  175 (215)
T ss_dssp             EEEEEECSBBSSCCHH-HHHTEE--EEEEEEEE
T ss_pred             ceeEEeecccccCCHH-HHHhcC--CCCEEEEE
Confidence            9999987666554333 488899  99999875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.87  E-value=0.0025  Score=53.89  Aligned_cols=75  Identities=24%  Similarity=0.353  Sum_probs=51.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH----HHHhcCCCee---eeCCChHHHH----HHh-cCCCccE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD----LVTSLNPNLV---IDYNEPEAMH----SIA-GAGPYDV  256 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~----~i~-~~~g~d~  256 (383)
                      +.+||+||++++|++++..+...|++|+.+++++ +.+    .+++.|....   .|..+.+-.+    .+. +.+++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4579999999999999988888999999999764 322    2334554322   3544433322    222 3478999


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      +++++|..
T Consensus        82 lVnnAG~~   89 (255)
T d1gega_          82 IVNNAGVA   89 (255)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99999863

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.86  E-value=0.0018  Score=56.22  Aligned_cols=77  Identities=30%  Similarity=0.382  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc----------hH-HHHH---hcCCCeeeeCCChHHH----HHH-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD----------AK-DLVT---SLNPNLVIDYNEPEAM----HSI-  248 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~----------~~-~~~~---~lg~~~v~~~~~~~~~----~~i-  248 (383)
                      +|+++||+||++++|.++++.+...|++|++.+.+.          .. +..+   ..+.....+..+.+-.    +.+ 
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            689999999999999999999999999999986321          11 1222   2333344555553222    222 


Q ss_pred             hcCCCccEEEEcCCCC
Q psy9949         249 AGAGPYDVILDAAGIP  264 (383)
Q Consensus       249 ~~~~g~d~v~d~~g~~  264 (383)
                      .+.+++|++|+++|..
T Consensus        86 ~~~G~iDiLVnNAGi~  101 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGIL  101 (302)
T ss_dssp             HHTSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCccC
Confidence            2357899999999863

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.86  E-value=0.00023  Score=59.90  Aligned_cols=73  Identities=26%  Similarity=0.430  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCeeeeCCChHHHHH----Hh-cCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLVIDYNEPEAMHS----IA-GAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~----i~-~~~g~d~v~d~~  261 (383)
                      +++++||+||++++|.++++.+...|++|+++.++++ .+.+..    ...|..+.+-.++    +. +.+++|++++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~----~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   81 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   81 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEE----EECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceE----EEEecCCHHHHHHHHHHHHHhcCCceEEEeee
Confidence            6899999999999999999999999999999996542 221111    1234444332222    22 236899999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        82 G~~   84 (237)
T d1uzma1          82 GLS   84 (237)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            863

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.82  E-value=0.00071  Score=56.69  Aligned_cols=36  Identities=31%  Similarity=0.437  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +|++|||+||++++|.++++.+...|++|+.++..+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~   36 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE   36 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            478999999999999999999999999999988544

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0017  Score=52.80  Aligned_cols=74  Identities=15%  Similarity=0.155  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .++|+|+||+|.+|..++..+...|.+|.+++++.. .......+...+ .|..+.+...+  ...+.|+||.++|..
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~--al~~~d~vi~~~g~~   78 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDK--TVAGQDAVIVLLGTR   78 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHH--HHTTCSEEEECCCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHH--HhcCCCEEEEEeccC
Confidence            467999999999999999988888999999997643 222222333322 24444322222  235799999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.81  E-value=0.0024  Score=54.15  Aligned_cols=77  Identities=18%  Similarity=0.327  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHH-HHH---hcCCCe---eeeCCChHHHH----HHhc-C-CC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKD-LVT---SLNPNL---VIDYNEPEAMH----SIAG-A-GP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~-~~~---~lg~~~---v~~~~~~~~~~----~i~~-~-~g  253 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +.+ .++   +.+...   ..|..+.+-.+    .+.+ . +.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998764 332 222   333321   13444433222    2222 2 45


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++++++|..
T Consensus        87 idilvnnAG~~   97 (259)
T d1xq1a_          87 LDILINNLGAI   97 (259)
T ss_dssp             CSEEEEECCC-
T ss_pred             ccccccccccc
Confidence            99999999863

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.78  E-value=0.0016  Score=55.01  Aligned_cols=77  Identities=18%  Similarity=0.248  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH----HhcCCCee----eeCC-Ch-HHHH---HHh-cCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV----TSLNPNLV----IDYN-EP-EAMH---SIA-GAG  252 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~----~~lg~~~v----~~~~-~~-~~~~---~i~-~~~  252 (383)
                      +|++|||+||++++|++++..+...|++|+++++. ++.+.+    ...+...+    .|.. +. +..+   .+. +.+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999998888744 333222    22332222    2332 22 2222   222 236


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      ++|++++++|..
T Consensus        84 ~iDilvnnAG~~   95 (254)
T d1sbya1          84 TVDILINGAGIL   95 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEeCCCCC
Confidence            899999999974

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.75  E-value=0.0037  Score=52.73  Aligned_cols=76  Identities=22%  Similarity=0.362  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCchH-H----HHHhcCCCeee--eCCChHHHHH----Hh-cCCC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDAK-D----LVTSLNPNLVI--DYNEPEAMHS----IA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~~-~----~~~~lg~~~v~--~~~~~~~~~~----i~-~~~g  253 (383)
                      +|+++||+||+|  ++|.++++.+...|++|+...++++. +    .....+....+  |..+.+-.+.    +. +.++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            789999999887  89999999988999999888866542 2    22334433333  4444322222    22 2478


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      +|++++++|.
T Consensus        87 iDilVnnag~   96 (256)
T d1ulua_          87 LDYLVHAIAF   96 (256)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999885

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0028  Score=54.00  Aligned_cols=77  Identities=19%  Similarity=0.164  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH-H----hcCCCee---eeCCChHHHHHHh-----cCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV-T----SLNPNLV---IDYNEPEAMHSIA-----GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~-~----~lg~~~v---~~~~~~~~~~~i~-----~~~g  253 (383)
                      +|+++||+||++|+|++++..+...|++|+.+++++ +.+.+ .    ..+....   .+..+......+.     ..+.
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   92 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG   92 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999764 33322 2    2232211   2333333222221     2367


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      .|+++.++|..
T Consensus        93 ~~~li~nag~~  103 (269)
T d1xu9a_          93 LDMLILNHITN  103 (269)
T ss_dssp             CSEEEECCCCC
T ss_pred             ccccccccccc
Confidence            99999988763

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.62  E-value=0.0043  Score=48.24  Aligned_cols=72  Identities=24%  Similarity=0.410  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-h-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-A-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      -.+.+|+|.| +|.+|.++++.+...|+ +++++.++. + .+++++++.. +.+++  ++.+.+   ..+|+||.|++.
T Consensus        22 l~~~~ilviG-aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~--~~~~~l---~~~Divi~atss   94 (159)
T d1gpja2          22 LHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD--ELVDHL---ARSDVVVSATAA   94 (159)
T ss_dssp             CTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--GHHHHH---HTCSEEEECCSS
T ss_pred             cccCeEEEEC-CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch--hHHHHh---ccCCEEEEecCC
Confidence            3778999999 69999999999998999 677777764 3 3577888853 33332  333333   369999999997


Q ss_pred             Cc
Q psy9949         264 PL  265 (383)
Q Consensus       264 ~~  265 (383)
                      +.
T Consensus        95 ~~   96 (159)
T d1gpja2          95 PH   96 (159)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.60  E-value=0.0029  Score=53.28  Aligned_cols=75  Identities=19%  Similarity=0.267  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCc-hHHHHHhc-CCC-ee--eeCCChH----HHHHHhcC---CCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGD-AKDLVTSL-NPN-LV--IDYNEPE----AMHSIAGA---GPY  254 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~-~~~~~~~l-g~~-~v--~~~~~~~----~~~~i~~~---~g~  254 (383)
                      .++|||+||++|+|+++++.+...|+  +|++++++. +.+.+++. +.. .+  .|..+.+    +.+.+.+.   .+.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            48999999999999999888887886  688888664 44444443 322 22  3444433    23333321   259


Q ss_pred             cEEEEcCCC
Q psy9949         255 DVILDAAGI  263 (383)
Q Consensus       255 d~v~d~~g~  263 (383)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999985

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.60  E-value=0.0037  Score=49.07  Aligned_cols=66  Identities=17%  Similarity=0.264  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCch-H-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDA-K-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~-~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .++++|+|+| +|+.+.+++..++..|+ +++++.|+.+ . .+++.++...+-...          ...+|++++|+.-
T Consensus        15 ~~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~----------~~~~DliINaTpi   83 (167)
T d1npya1          15 NKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE----------NQQADILVNVTSI   83 (167)
T ss_dssp             CTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT----------TCCCSEEEECSST
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc----------ccchhhheecccc
Confidence            6778999999 89999999999999998 7777777643 3 345556654331111          1358999999763

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0038  Score=53.26  Aligned_cols=76  Identities=24%  Similarity=0.351  Sum_probs=49.2

Q ss_pred             CCEE-EEEcCCchHHHHHHH-HHHHCCCEEEEEecCc-hHH----HHHhcCCC-ee--eeCCChHH----HHHHhc-CCC
Q psy9949         189 DKRV-LVLGASGGVGTMAVQ-LLKAWDIEVVTTCSGD-AKD----LVTSLNPN-LV--IDYNEPEA----MHSIAG-AGP  253 (383)
Q Consensus       189 ~~~V-lI~ga~g~vG~~ai~-la~~~G~~Vi~~~~~~-~~~----~~~~lg~~-~v--~~~~~~~~----~~~i~~-~~g  253 (383)
                      |++| ||+||++|+|+++++ |++..|++|+.+++++ +.+    .+++.+.. .+  .|..+.+-    .+++.+ .++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4455 899999999998775 5566689999999774 322    22333432 22  35554332    333332 368


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|++|+++|..
T Consensus        82 iDiLVnNAGi~   92 (275)
T d1wmaa1          82 LDVLVNNAGIA   92 (275)
T ss_dssp             EEEEEECCCCC
T ss_pred             cEEEEEcCCcC
Confidence            99999999863

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.44  E-value=0.0062  Score=51.59  Aligned_cols=98  Identities=19%  Similarity=0.203  Sum_probs=63.7

Q ss_pred             HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecC-chHHHH----HhcCCC-ee-eeCCChHHHHHH
Q psy9949         178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSG-DAKDLV----TSLNPN-LV-IDYNEPEAMHSI  248 (383)
Q Consensus       178 ~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~-~~~~~~----~~lg~~-~v-~~~~~~~~~~~i  248 (383)
                      ...++    ++|++||=.| + |.|.+++.+|+..|  .+|++++.+ +..+.+    +.++.. .+ +...+  .... 
T Consensus        97 ~~l~i----~pG~~VLDiG-~-GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d--~~~~-  167 (266)
T d1o54a_          97 MMLDV----KEGDRIIDTG-V-GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--ISEG-  167 (266)
T ss_dssp             HHTTC----CTTCEEEEEC-C-TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--GGGC-
T ss_pred             HhhCC----CCCCEEEECC-C-CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc--cccc-
Confidence            36777    9999999998 3 44888889999875  599999954 444433    445542 22 22222  1111 


Q ss_pred             hcCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         249 AGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       249 ~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .+...+|.|+--...+......+.++|+  |+|+++.+
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LK--pGG~lv~~  203 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALK--GGGRFATV  203 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEE--EEEEEEEE
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcC--CCCEEEEE
Confidence            1124688888777766543333378899  99999876

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0069  Score=47.58  Aligned_cols=92  Identities=15%  Similarity=0.164  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC-eeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN-LVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .++++|+|.| +||.+.+++..+...|++++.+.|+. +. ++++.+... .+......+.     ....+|++++|+..
T Consensus        16 ~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~Tp~   89 (170)
T d1nyta1          16 RPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINATSS   89 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECCSC
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeeccccc
Confidence            5789999999 89999999999999999977777764 32 344443321 1111111111     12468999999865


Q ss_pred             Cccccc-c-cccccccCCCceEEEe
Q psy9949         264 PLDQIN-S-YLPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ~~~~~~-~-~~~~l~~~~~G~~v~~  286 (383)
                      ...... . -.+.+.  ++..++++
T Consensus        90 G~~~~~~~~~~~~~~--~~~~v~D~  112 (170)
T d1nyta1          90 GISGDIPAIPSSLIH--PGIYCYDM  112 (170)
T ss_dssp             GGGTCCCCCCGGGCC--TTCEEEES
T ss_pred             CcccCCCCCcHHHhc--cCcEEEEe
Confidence            432111 0 034455  66666665

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.41  E-value=0.0047  Score=51.31  Aligned_cols=36  Identities=19%  Similarity=0.372  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA  224 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~  224 (383)
                      +.+|||+||++++|.++++.+...|++|+.++++++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            357999999999999999999999999999986643

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0055  Score=42.83  Aligned_cols=73  Identities=19%  Similarity=0.203  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhc--CCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSL--NPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~l--g~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      ++++|+|.| .|..|+++++++...|++|++.++....+....+  +....+........      .++|.++-+.|.+.
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~vi~SPGi~~   76 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWL------MAADLIVASPGIAL   76 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCCHHHH------HHCSEEEECTTSCT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccchhhh------ccCCEEEECCCCCC
Confidence            577899999 8999999999999999999999965432222222  22223333222211      24789998888765


Q ss_pred             cc
Q psy9949         266 DQ  267 (383)
Q Consensus       266 ~~  267 (383)
                      ..
T Consensus        77 ~~   78 (93)
T d2jfga1          77 AH   78 (93)
T ss_dssp             TS
T ss_pred             CC
Confidence            43

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.35  E-value=0.0051  Score=51.78  Aligned_cols=73  Identities=15%  Similarity=0.080  Sum_probs=50.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHH----hcCCCeeeeCCC-hHHHHHHh-cCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVT----SLNPNLVIDYNE-PEAMHSIA-GAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~----~lg~~~v~~~~~-~~~~~~i~-~~~g~d~v~d~~g~  263 (383)
                      |+||+||++++|++++..+...|++|+..+++. +.+.++    ......+.+..+ ..+.+.+. +.+++|++|+++|.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            789999999999999998889999999988553 333222    233333444333 33344443 34789999998774

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.33  E-value=0.0066  Score=50.76  Aligned_cols=75  Identities=21%  Similarity=0.308  Sum_probs=50.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cCch-HH----HHHhcCCCee---eeCCChHHHHH----Hh-cCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC-SGDA-KD----LVTSLNPNLV---IDYNEPEAMHS----IA-GAGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~-~~~~-~~----~~~~lg~~~v---~~~~~~~~~~~----i~-~~~g~d  255 (383)
                      ..+||+||++++|+++++.+...|++|+..+ ++++ .+    .+++.|....   .|..+.+-.+.    +. +.+++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999998876 3432 22    2334554321   34444333222    22 247899


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      ++++++|..
T Consensus        82 iLVnnAg~~   90 (244)
T d1edoa_          82 VVVNNAGIT   90 (244)
T ss_dssp             EEEECCCCC
T ss_pred             ccccccccc
Confidence            999999864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.30  E-value=0.0026  Score=52.16  Aligned_cols=99  Identities=22%  Similarity=0.249  Sum_probs=63.9

Q ss_pred             HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCch-HHH----HHhcCCCeeeeCCChHHHHHHhc
Q psy9949         178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDA-KDL----VTSLNPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       178 ~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~-~~~----~~~lg~~~v~~~~~~~~~~~i~~  250 (383)
                      +..++    ++|++||-.| +| .|..++.+|+..|.  +|+++..+++ .+.    ++..+.+++..... +..+....
T Consensus        69 ~~l~l----~~g~~VLdiG-~G-tG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~-d~~~~~~~  141 (213)
T d1dl5a1          69 EWVGL----DKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG-DGYYGVPE  141 (213)
T ss_dssp             HHTTC----CTTCEEEEEC-CT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-CGGGCCGG
T ss_pred             Hhhhc----cccceEEEec-Cc-cchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC-chHHcccc
Confidence            36677    9999999999 44 48889999998763  8999985543 333    33455544421111 11111222


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .+.||+|+.+.+-...... +++.|+  ++|+++..
T Consensus       142 ~~~fD~I~~~~~~~~~p~~-l~~~Lk--pGG~lv~p  174 (213)
T d1dl5a1         142 FSPYDVIFVTVGVDEVPET-WFTQLK--EGGRVIVP  174 (213)
T ss_dssp             GCCEEEEEECSBBSCCCHH-HHHHEE--EEEEEEEE
T ss_pred             ccchhhhhhhccHHHhHHH-HHHhcC--CCcEEEEE
Confidence            3569999987765554333 378899  99999874

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.29  E-value=0.01  Score=50.34  Aligned_cols=77  Identities=18%  Similarity=0.291  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCchH-H----HHHhcCCCee--eeCCChHHH----HHHh-cCCC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDAK-D----LVTSLNPNLV--IDYNEPEAM----HSIA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~~-~----~~~~lg~~~v--~~~~~~~~~----~~i~-~~~g  253 (383)
                      +|+++||+||+|  ++|.++++.+...|++|+.+.++++. +    +..+.+...+  .+..+..-.    +++. ..+.
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            689999999877  79999999999999999999976532 2    2223332222  233332222    2222 2468


Q ss_pred             ccEEEEcCCCC
Q psy9949         254 YDVILDAAGIP  264 (383)
Q Consensus       254 ~d~v~d~~g~~  264 (383)
                      +|+++.+.|..
T Consensus        84 id~lV~nag~~   94 (274)
T d2pd4a1          84 LDFIVHSVAFA   94 (274)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCeEEeecccc
Confidence            99999998864

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0088  Score=49.99  Aligned_cols=47  Identities=15%  Similarity=0.180  Sum_probs=39.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPN  234 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~  234 (383)
                      +|+++||+||++++|.++++.+...|++|+.+++++ +. +.+++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999553 33 455666654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.19  E-value=0.012  Score=49.45  Aligned_cols=79  Identities=20%  Similarity=0.352  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc----h-HHH---HHhcCCCee---eeCCChHHHHHHh----
Q psy9949         186 YPRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD----A-KDL---VTSLNPNLV---IDYNEPEAMHSIA----  249 (383)
Q Consensus       186 ~~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~----~-~~~---~~~lg~~~v---~~~~~~~~~~~i~----  249 (383)
                      ++|+.++||+||+|++|++++..+...|+ +|+.+.++.    . .+.   +++.|..-.   .|..+.+-...+.    
T Consensus         6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccc
Confidence            48999999999999999999988888899 566555532    1 122   234554321   3444443333332    


Q ss_pred             cCCCccEEEEcCCCC
Q psy9949         250 GAGPYDVILDAAGIP  264 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~  264 (383)
                      +..+.|.++.+.|..
T Consensus        86 ~~~~i~~vv~~ag~~  100 (259)
T d2fr1a1          86 DDVPLSAVFHAAATL  100 (259)
T ss_dssp             TTSCEEEEEECCCCC
T ss_pred             ccccccccccccccc
Confidence            234689999998864

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.016  Score=48.64  Aligned_cols=76  Identities=18%  Similarity=0.295  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCch-HH----HHHhcCCCeeeeCCC--hH----HHHHHh-cCCC
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGDA-KD----LVTSLNPNLVIDYNE--PE----AMHSIA-GAGP  253 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~~-~~----~~~~lg~~~v~~~~~--~~----~~~~i~-~~~g  253 (383)
                      +|+++||+||+|  ++|.+++..+...|++|+.+.++++ .+    .....+.......+.  ..    ...++. ..+.
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            789999999988  7889999999999999999886653 22    233444443332222  11    111222 2357


Q ss_pred             ccEEEEcCCC
Q psy9949         254 YDVILDAAGI  263 (383)
Q Consensus       254 ~d~v~d~~g~  263 (383)
                      .|+.+++++.
T Consensus        84 ~d~~v~~a~~   93 (258)
T d1qsga_          84 FDGFVHSIGF   93 (258)
T ss_dssp             EEEEEECCCC
T ss_pred             cceEEEeecc
Confidence            8999998765

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=95.95  E-value=0.0035  Score=51.66  Aligned_cols=96  Identities=18%  Similarity=0.149  Sum_probs=61.2

Q ss_pred             HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHh----cCCCeeeeCCChHHHHHHhcCC
Q psy9949         178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTS----LNPNLVIDYNEPEAMHSIAGAG  252 (383)
Q Consensus       178 ~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~----lg~~~v~~~~~~~~~~~i~~~~  252 (383)
                      +...+    +++++||-.|  +|.|..++.+++. +.+|+++...++ .+.+++    .....++..+.   .....+.+
T Consensus        64 ~~L~l----~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~---~~g~~~~~  133 (224)
T d1vbfa_          64 DELDL----HKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDG---TLGYEEEK  133 (224)
T ss_dssp             HHTTC----CTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG---GGCCGGGC
T ss_pred             HHhhh----cccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCch---hhcchhhh
Confidence            35677    9999999998  3467888888876 569999986553 344433    22112222221   11122345


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .||.|+-+.+.+..... +++.|+  ++|++|..
T Consensus       134 pfD~Iiv~~a~~~ip~~-l~~qLk--~GGrLV~p  164 (224)
T d1vbfa_         134 PYDRVVVWATAPTLLCK-PYEQLK--EGGIMILP  164 (224)
T ss_dssp             CEEEEEESSBBSSCCHH-HHHTEE--EEEEEEEE
T ss_pred             hHHHHHhhcchhhhhHH-HHHhcC--CCCEEEEE
Confidence            79999876665554333 478899  99999875

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.90  E-value=0.01  Score=48.63  Aligned_cols=73  Identities=16%  Similarity=0.137  Sum_probs=45.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchHHHHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAKDLVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      .+|||+||+|.+|..++..+...|.  .|+...++.+......-+...+ .|..+.....+.  ..++|.|+.+++..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vi~~a~~~   79 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA--FQGIDALVILTSAV   79 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHH--HTTCSEEEECCCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccc--cccceeeEEEEeec
Confidence            5899999999999999999988886  4555555543211111223222 233333222222  35799999988754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.90  E-value=0.011  Score=49.41  Aligned_cols=74  Identities=22%  Similarity=0.321  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHH---HCCCEEEEEecCc-hHHH----HHhcCCCee--eeCCChH----HHHHHh---cCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLK---AWDIEVVTTCSGD-AKDL----VTSLNPNLV--IDYNEPE----AMHSIA---GAG  252 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~---~~G~~Vi~~~~~~-~~~~----~~~lg~~~v--~~~~~~~----~~~~i~---~~~  252 (383)
                      ++|||+||++|+|+++++.+.   ..|++|+++++++ +.+.    .++.+...+  .|..+.+    +.+.+.   ..+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            589999999999999876553   3588999999664 3222    222222122  3444432    333332   235


Q ss_pred             CccEEEEcCCC
Q psy9949         253 PYDVILDAAGI  263 (383)
Q Consensus       253 g~d~v~d~~g~  263 (383)
                      ++|++++++|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            79999999885

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.0094  Score=43.08  Aligned_cols=67  Identities=19%  Similarity=0.244  Sum_probs=44.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCe-eeeCCChHHHHHHhcCCCccEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNL-VIDYNEPEAMHSIAGAGPYDVI  257 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~i~~~~g~d~v  257 (383)
                      +.+|.|.| +|.+|.+.++-|+.+|.++++.+.+++. -+....... +.++++.+-...+....++|+|
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~-PA~~va~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADA-PAMHVAHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTC-GGGGGSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCC-chhhcCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            35699999 8999999999999999999999865432 222333222 2456665544443333356776

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.88  E-value=0.092  Score=40.10  Aligned_cols=102  Identities=15%  Similarity=0.024  Sum_probs=68.6

Q ss_pred             HHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCC
Q psy9949         173 WSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAG  252 (383)
Q Consensus       173 ~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~  252 (383)
                      +.++.+..++.   -.|++++|.| =|-+|.-.++-+|.+|++|+++..+.-..+-..+.--.+..     ..+.   ..
T Consensus        10 ~d~i~r~t~~~---laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~-----~~~a---~~   77 (163)
T d1v8ba1          10 PDGLMRATDFL---ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVT-----LDEI---VD   77 (163)
T ss_dssp             HHHHHHHHCCC---CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECC-----HHHH---TT
T ss_pred             HHHHHHHhCce---ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCc-----hhHc---cc
Confidence            34444444441   5899999999 99999999999999999999998654332222232223321     2222   23


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..|+++-++|.........++.|+  .+..+..+|.
T Consensus        78 ~aDi~vTaTGn~~vI~~~h~~~MK--dgaIl~N~GH  111 (163)
T d1v8ba1          78 KGDFFITCTGNVDVIKLEHLLKMK--NNAVVGNIGH  111 (163)
T ss_dssp             TCSEEEECCSSSSSBCHHHHTTCC--TTCEEEECSS
T ss_pred             cCcEEEEcCCCCccccHHHHHHhh--CCeEEEeccc
Confidence            589999999998754433478888  7777777654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.73  E-value=0.069  Score=41.98  Aligned_cols=93  Identities=16%  Similarity=0.192  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hHH----HHHhcC----C-CeeeeCCC-hHHHHHHhcCCCcc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AKD----LVTSLN----P-NLVIDYNE-PEAMHSIAGAGPYD  255 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~~----~~~~lg----~-~~v~~~~~-~~~~~~i~~~~g~d  255 (383)
                      ++++|+|.| +|+.+.+++..+...|+ +++.+.+.. +.+    ++++++    . ..+.+..+ ..+.+.+   ..+|
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d   92 (182)
T d1vi2a1          17 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL---ASAD   92 (182)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH---HTCS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh---cccc
Confidence            678999999 89999999998888998 677777653 222    333332    1 12234433 2232222   3689


Q ss_pred             EEEEcCCCCccc--cccc---ccccccCCCceEEEe
Q psy9949         256 VILDAAGIPLDQ--INSY---LPFLKTGKFSKFVTL  286 (383)
Q Consensus       256 ~v~d~~g~~~~~--~~~~---~~~l~~~~~G~~v~~  286 (383)
                      ++++|+.-....  ...+   ...+.  ++..++++
T Consensus        93 iiIN~Tp~G~~~~~~~~~~~~~~~~~--~~~~v~Di  126 (182)
T d1vi2a1          93 ILTNGTKVGMKPLENESLVNDISLLH--PGLLVTEC  126 (182)
T ss_dssp             EEEECSSTTSTTSCSCCSCCCGGGSC--TTCEEEEC
T ss_pred             eeccccCCccccccchhhhhHHHhhh--cchhhHHh
Confidence            999998643211  1000   33455  77777776

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.66  E-value=0.015  Score=48.33  Aligned_cols=75  Identities=16%  Similarity=0.231  Sum_probs=48.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCE-------EEEEecCc-hHH-H---HHhcCCCee---eeCCChHHHH----HHh-
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIE-------VVTTCSGD-AKD-L---VTSLNPNLV---IDYNEPEAMH----SIA-  249 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~-------Vi~~~~~~-~~~-~---~~~lg~~~v---~~~~~~~~~~----~i~-  249 (383)
                      +.|||+||++++|++++..+...|++       |+...+++ +.+ .   +++.|....   .|..+.+-.+    .+. 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35799999999999998888888886       66666654 322 2   233443311   3555533222    222 


Q ss_pred             cCCCccEEEEcCCCC
Q psy9949         250 GAGPYDVILDAAGIP  264 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~  264 (383)
                      +.+++|++++++|..
T Consensus        82 ~~g~iDilvnnAg~~   96 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVG   96 (240)
T ss_dssp             HTSCCSEEEECCCCC
T ss_pred             HcCCcceeecccccc
Confidence            347899999999863

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.011  Score=48.77  Aligned_cols=73  Identities=22%  Similarity=0.344  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCc-h--HHHHHhcCCCeeeeCCChHHHHHHhc-CCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGD-A--KDLVTSLNPNLVIDYNEPEAMHSIAG-AGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~-~--~~~~~~lg~~~v~~~~~~~~~~~i~~-~~g~d~v~d~~  261 (383)
                      .+++|||+||+|-+|..+++.+...|.  +|++++++. +  .+....... .+.|..+   .+.+.+ ..++|++|.|+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~-~~~D~~~---~~~~~~~~~~~d~vi~~~   88 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQ-EVVDFEK---LDDYASAFQGHDVGFCCL   88 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEE-EECCGGG---GGGGGGGGSSCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeee-eeecccc---cccccccccccccccccc
Confidence            457899999999999999998887775  899999653 2  122222111 1122222   122222 36899999999


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      |..
T Consensus        89 ~~~   91 (232)
T d2bkaa1          89 GTT   91 (232)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.63  E-value=0.011  Score=42.76  Aligned_cols=88  Identities=15%  Similarity=0.078  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--H-HHHHhcCCCeee-eCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--K-DLVTSLNPNLVI-DYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~-~~~~~lg~~~v~-~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      .+++|+|.| +|.+|..-++.+...|++|++++....  . .++.+-.....- .+...+       ..++++|+-+++.
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d-------l~~~~lv~~at~d   82 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL-------LDSCWLAIAATDD   82 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-------GTTCSEEEECCSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHH-------hCCCcEEeecCCC
Confidence            688999999 899999999999999999998885432  2 233332222221 122222       3478999999888


Q ss_pred             CcccccccccccccCCCceEEEe
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...... +.+..+  +.|.+|.+
T Consensus        83 ~~~n~~-i~~~a~--~~~ilVNv  102 (113)
T d1pjqa1          83 DTVNQR-VSDAAE--SRRIFCNV  102 (113)
T ss_dssp             HHHHHH-HHHHHH--HTTCEEEE
T ss_pred             HHHHHH-HHHHHH--HcCCEEEe
Confidence            765433 145556  77888876

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.48  E-value=0.03  Score=46.87  Aligned_cols=75  Identities=16%  Similarity=0.173  Sum_probs=48.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH--HHHH----hcCCCeeee----CCC---hHHHHH----H-hc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK--DLVT----SLNPNLVID----YNE---PEAMHS----I-AG  250 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~--~~~~----~lg~~~v~~----~~~---~~~~~~----i-~~  250 (383)
                      .+.||+||++++|.++++.+...|++|+.+.++. +.  +.++    ..+......    ..+   .+....    + .+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999653 22  2222    223332211    111   121212    2 22


Q ss_pred             CCCccEEEEcCCCC
Q psy9949         251 AGPYDVILDAAGIP  264 (383)
Q Consensus       251 ~~g~d~v~d~~g~~  264 (383)
                      .+++|++++++|..
T Consensus        82 ~g~iDilvnnAG~~   95 (266)
T d1mxha_          82 FGRCDVLVNNASAY   95 (266)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCCCEEEECCccC
Confidence            47899999999853

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.38  E-value=0.022  Score=50.20  Aligned_cols=75  Identities=12%  Similarity=0.106  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee--eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV--IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +.-+|||+||+|=+|..++..+...|.+|+++++...............  .|..+.  ........++|.|+.+++..
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~d~Vih~a~~~   90 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVM--ENCLKVTEGVDHVFNLAADM   90 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSH--HHHHHHHTTCSEEEECCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhH--HHHHHHhhcCCeEeeccccc
Confidence            4678999999999999999999999999999985433222222222222  233332  22222235899999987543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.16  E-value=0.044  Score=45.95  Aligned_cols=77  Identities=16%  Similarity=0.210  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCch-H-H-HHHhcCCCe---eeeCCChH----HHHHHhc----
Q psy9949         187 PRDKRVLVLGAS--GGVGTMAVQLLKAWDIEVVTTCSGDA-K-D-LVTSLNPNL---VIDYNEPE----AMHSIAG----  250 (383)
Q Consensus       187 ~~~~~VlI~ga~--g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~-~~~~lg~~~---v~~~~~~~----~~~~i~~----  250 (383)
                      =+|+++||+||+  .++|.++++-+...|++|+.+.+++. . + ..++++...   ..|..+.+    ..+.+.+    
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            378999999965  46999999999999999999886543 2 2 344555432   12344332    2222322    


Q ss_pred             CCCccEEEEcCCC
Q psy9949         251 AGPYDVILDAAGI  263 (383)
Q Consensus       251 ~~g~d~v~d~~g~  263 (383)
                      .+..|+++.++|.
T Consensus        84 ~~~ld~~i~~ag~   96 (268)
T d2h7ma1          84 GNKLDGVVHSIGF   96 (268)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCcceeeecccc
Confidence            3568999999885

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.11  E-value=0.014  Score=49.31  Aligned_cols=61  Identities=25%  Similarity=0.388  Sum_probs=42.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|-+|..++..++..|.+|+++++.+             +|..+.+..+++.....+|+|+.+++..
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------~D~~d~~~~~~~l~~~~~d~vih~a~~~   63 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------LDITNVLAVNKFFNEKKPNVVINCAAHT   63 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------ccCCCHHHHHHHHHHcCCCEEEeecccc
Confidence            599999999999999999999999999998642             1222322222332223567888877654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.09  E-value=0.043  Score=42.66  Aligned_cols=94  Identities=19%  Similarity=0.215  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +++|+|.| +|.+|..+++.+...|.+|+++.++.. . +++.+++...+...........-......|.++.+......
T Consensus         2 ~K~IliiG-aG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~   80 (182)
T d1e5qa1           2 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH   80 (182)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhh
Confidence            57899999 799999999999888999999997753 3 44555554333222211111111112467888877765443


Q ss_pred             cccccccccccCCCceEEEe
Q psy9949         267 QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .... ..+..  .+..++.+
T Consensus        81 ~~~~-~~~~~--~~~~~~~~   97 (182)
T d1e5qa1          81 ATVI-KSAIR--QKKHVVTT   97 (182)
T ss_dssp             HHHH-HHHHH--HTCEEECS
T ss_pred             hHHH-HHHHh--hccceeec
Confidence            3221 23334  44455543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.00  E-value=0.036  Score=43.31  Aligned_cols=70  Identities=17%  Similarity=0.269  Sum_probs=46.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcC---CCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLN---PNLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg---~~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      .++++|+|.| +|+.+.+++..+...+.+++.+.|+. +. .+++.++   .......+.       .....+|++++|+
T Consensus        16 ~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-------~~~~~~diiIN~t   87 (171)
T d1p77a1          16 RPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-------IPLQTYDLVINAT   87 (171)
T ss_dssp             CTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-------CCCSCCSEEEECC
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-------ccccccceeeecc
Confidence            5788999999 89999999888877666988888774 32 3444443   111222111       1235799999998


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      +..
T Consensus        88 p~g   90 (171)
T d1p77a1          88 SAG   90 (171)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.93  E-value=0.0057  Score=50.78  Aligned_cols=35  Identities=31%  Similarity=0.387  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ++++||+||++++|.++++.+...|++|+.+++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~   35 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRR   35 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            46899999999999999999999999999999654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=94.73  E-value=0.041  Score=48.07  Aligned_cols=77  Identities=17%  Similarity=0.148  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHHhc----CCCee-eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVTSL----NPNLV-IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~~l----g~~~v-~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+++|||+||+|-+|..+++.+...|.+|+++++...  ..+.+..    +...+ .|-.+.+....+.....+|+|+.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            5789999999999999999999999999999996532  1222221    12222 244454444444444578999998


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      ++..
T Consensus        87 aa~~   90 (356)
T d1rkxa_          87 AAQP   90 (356)
T ss_dssp             CSCC
T ss_pred             hccc
Confidence            8764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.73  E-value=0.075  Score=44.81  Aligned_cols=32  Identities=25%  Similarity=0.187  Sum_probs=28.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .+||+||++++|.++++.+...|++|+..++.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~   35 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR   35 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            47899999999999999999999999988744

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.013  Score=48.26  Aligned_cols=92  Identities=17%  Similarity=0.165  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCch-HHHH----HhcC-----CCee--eeCCChHHHHHHhcCC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGDA-KDLV----TSLN-----PNLV--IDYNEPEAMHSIAGAG  252 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~~-~~~~----~~lg-----~~~v--~~~~~~~~~~~i~~~~  252 (383)
                      ++|++||-.|  .|.|..++.+|+..|  .+|+++...++ .+.+    ++.+     .+.+  ...+.   .....+..
T Consensus        75 ~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~---~~~~~~~~  149 (224)
T d1i1na_          75 HEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG---RMGYAEEA  149 (224)
T ss_dssp             CTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG---GGCCGGGC
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec---ccccchhh
Confidence            8999999998  567888889998766  39999986543 2332    2222     2222  21111   11112235


Q ss_pred             CccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         253 PYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       253 g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .||+|+.+.+-+..... +++.|+  ++|++|..
T Consensus       150 ~fD~I~~~~~~~~ip~~-l~~~Lk--pGG~LV~p  180 (224)
T d1i1na_         150 PYDAIHVGAAAPVVPQA-LIDQLK--PGGRLILP  180 (224)
T ss_dssp             CEEEEEECSBBSSCCHH-HHHTEE--EEEEEEEE
T ss_pred             hhhhhhhhcchhhcCHH-HHhhcC--CCcEEEEE
Confidence            79999987766554333 488999  99999875

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.60  E-value=0.009  Score=49.11  Aligned_cols=94  Identities=14%  Similarity=0.194  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC---C----CEEEEEecCchH-HHHH---------hcCCCeeeeCCChHHHHHHh
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAW---D----IEVVTTCSGDAK-DLVT---------SLNPNLVIDYNEPEAMHSIA  249 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~---G----~~Vi~~~~~~~~-~~~~---------~lg~~~v~~~~~~~~~~~i~  249 (383)
                      +++++||..|  ++.|..++.+++..   |    .+|+++...++. +.++         ..+..++..... +..+...
T Consensus        79 ~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~-d~~~~~~  155 (223)
T d1r18a_          79 KPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG-DGRKGYP  155 (223)
T ss_dssp             CTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES-CGGGCCG
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec-ccccccc
Confidence            8999999998  44566666666553   4    389999865432 3322         123333321111 1111112


Q ss_pred             cCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         250 GAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       250 ~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      +.+.||.|+-+.+-+..... +++.|+  ++|++|..
T Consensus       156 ~~~~fD~Iiv~~a~~~~p~~-l~~~Lk--~gG~lV~p  189 (223)
T d1r18a_         156 PNAPYNAIHVGAAAPDTPTE-LINQLA--SGGRLIVP  189 (223)
T ss_dssp             GGCSEEEEEECSCBSSCCHH-HHHTEE--EEEEEEEE
T ss_pred             cccceeeEEEEeechhchHH-HHHhcC--CCcEEEEE
Confidence            23579999987776654433 478899  99999874

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=94.47  E-value=0.016  Score=48.27  Aligned_cols=100  Identities=16%  Similarity=0.062  Sum_probs=62.3

Q ss_pred             HHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHH----HHhcCCCe-e--eeCCChHHHH
Q psy9949         175 ALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDL----VTSLNPNL-V--IDYNEPEAMH  246 (383)
Q Consensus       175 ~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~----~~~lg~~~-v--~~~~~~~~~~  246 (383)
                      .|....++    ++|++||=.|  .|.|..+..+++..|++|++++-++ ..+.    +.+.|... +  ...+..+   
T Consensus        24 ~l~~~~~l----~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~---   94 (245)
T d1nkva_          24 TLGRVLRM----KPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG---   94 (245)
T ss_dssp             HHHHHTCC----CTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT---
T ss_pred             HHHHHcCC----CCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhh---
Confidence            34457788    9999999998  4566778888888899999999554 3343    33455431 2  2222111   


Q ss_pred             HHhcCCCccEEEEcCC-----CCcccccccccccccCCCceEEEe
Q psy9949         247 SIAGAGPYDVILDAAG-----IPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       247 ~i~~~~g~d~v~d~~g-----~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                       +...+.||.|+-.-.     .......++.++|+  |+|+++..
T Consensus        95 -~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~Lk--PGG~l~i~  136 (245)
T d1nkva_          95 -YVANEKCDVAACVGATWIAGGFAGAEELLAQSLK--PGGIMLIG  136 (245)
T ss_dssp             -CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEE--EEEEEEEE
T ss_pred             -ccccCceeEEEEEehhhccCCHHHHHHHHHHHcC--cCcEEEEE
Confidence             112356998885422     22222222378899  99999875

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.43  E-value=0.057  Score=46.54  Aligned_cols=74  Identities=16%  Similarity=0.200  Sum_probs=48.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEec---CchH---HHHHhcCCCeee--eCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCS---GDAK---DLVTSLNPNLVI--DYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~---~~~~---~~~~~lg~~~v~--~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      +|||+||+|-+|..++..+...|.+|+++++   ....   +.+...+.-.++  |-.+.+....+....++|+||.+++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            6999999999999999999888999999862   2222   233333322232  4444333333333346899999987


Q ss_pred             CC
Q psy9949         263 IP  264 (383)
Q Consensus       263 ~~  264 (383)
                      ..
T Consensus        82 ~~   83 (338)
T d1orra_          82 QV   83 (338)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.34  E-value=0.25  Score=37.81  Aligned_cols=95  Identities=17%  Similarity=0.032  Sum_probs=63.7

Q ss_pred             hhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChH
Q psy9949         164 GVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPE  243 (383)
Q Consensus       164 ~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~  243 (383)
                      .+||+....+..|.+ -++.   -.|++|+|.|.+.-+|.-+..++...|++|+...+..                  .+
T Consensus        16 ~~PcTp~aI~~lL~~-y~i~---l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t------------------~~   73 (166)
T d1b0aa1          16 LRPCTPRGIVTLLER-YNID---TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------------KN   73 (166)
T ss_dssp             SCCHHHHHHHHHHHH-TTCC---CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------------SC
T ss_pred             CCCchHHHHHHHHHH-cCcc---cccceEEEEeccccccHHHHHHHHHhhcccccccccc------------------ch
Confidence            344554444444543 2321   3799999999889999999999999999987665332                  11


Q ss_pred             HHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         244 AMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       244 ~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ..+.++   ..|+++-++|.+....   -+.++  ++..++++|-
T Consensus        74 l~~~~~---~ADivI~a~G~p~~i~---~~~vk--~g~vvIDvGi  110 (166)
T d1b0aa1          74 LRHHVE---NADLLIVAVGKPGFIP---GDWIK--EGAIVIDVGI  110 (166)
T ss_dssp             HHHHHH---HCSEEEECSCCTTCBC---TTTSC--TTCEEEECCC
T ss_pred             hHHHHh---hhhHhhhhccCccccc---ccccC--CCcEEEecCc
Confidence            122221   3789999999877543   45677  8888888764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.33  E-value=0.17  Score=40.39  Aligned_cols=46  Identities=20%  Similarity=0.223  Sum_probs=38.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPN  234 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~  234 (383)
                      .|.+|+|.| .|.+|..+++++...|++|++.+.+ ++.+....+|..
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~   72 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT   72 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccc
Confidence            678999999 9999999999999999999988754 445556666654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.28  E-value=0.05  Score=48.36  Aligned_cols=32  Identities=28%  Similarity=0.335  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTC  220 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~  220 (383)
                      |.+|||+||+|=+|..++..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            57899999999999999999999999999986

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.26  E-value=0.07  Score=45.76  Aligned_cols=75  Identities=15%  Similarity=0.110  Sum_probs=48.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc---hHHHHHhcCCC---ee--eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD---AKDLVTSLNPN---LV--IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~---~~~~~~~lg~~---~v--~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      ++|||+||+|-+|..++..+...|.+|+++++..   ..+.++.++..   .+  .|-.+.............++++.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            4799999999999999998888899999998532   23444444432   11  2444443333333334567777776


Q ss_pred             CCC
Q psy9949         262 GIP  264 (383)
Q Consensus       262 g~~  264 (383)
                      ...
T Consensus        81 ~~~   83 (321)
T d1rpna_          81 AQS   83 (321)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.065  Score=45.50  Aligned_cols=75  Identities=19%  Similarity=0.265  Sum_probs=46.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe---cCc-hH----HHHHhc---CCC-ee--eeCCChHHHHHHhc---CC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTC---SGD-AK----DLVTSL---NPN-LV--IDYNEPEAMHSIAG---AG  252 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~---~~~-~~----~~~~~l---g~~-~v--~~~~~~~~~~~i~~---~~  252 (383)
                      +.|||+||++|+|.+++..+...|++|+.+.   ++. +.    +.++++   +.. ..  .|..+.+-.+.+.+   .+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            4578999999999999998888898755443   332 21    223333   222 11  35555443333322   25


Q ss_pred             CccEEEEcCCCC
Q psy9949         253 PYDVILDAAGIP  264 (383)
Q Consensus       253 g~d~v~d~~g~~  264 (383)
                      .+|++++++|..
T Consensus        83 ~idilvnnag~~   94 (285)
T d1jtva_          83 RVDVLVCNAGLG   94 (285)
T ss_dssp             CCSEEEECCCCC
T ss_pred             chhhhhhccccc
Confidence            799999998864

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.17  E-value=0.067  Score=45.38  Aligned_cols=74  Identities=16%  Similarity=0.248  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch------HH---HHHhcCCCee-eeCCChHHHHHHhcCCCccEEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA------KD---LVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~------~~---~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      ..+|||+||+|-+|..++..+...|.+|++++++..      .+   .....++..+ .|..+.+...  ....+.+.++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~--~~~~~~~~~~   80 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLV--DALKQVDVVI   80 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHH--HHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhh--hhccCcchhh
Confidence            456999999999999999988889999999986531      11   2233444332 2344432222  2235788888


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      .+.+..
T Consensus        81 ~~~~~~   86 (312)
T d1qyda_          81 SALAGG   86 (312)
T ss_dssp             ECCCCS
T ss_pred             hhhhhc
Confidence            887654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.13  E-value=0.065  Score=46.53  Aligned_cols=73  Identities=26%  Similarity=0.340  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC---c--hHHHHHhc---CCCee-eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG---D--AKDLVTSL---NPNLV-IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~---~--~~~~~~~l---g~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|||+||+|-+|..++..+...|.+|+++++-   .  .....+.+   ....+ .|-.+.+....+....++|+||.++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            59999999999999999999999999998731   1  12222222   23222 2444444333333345799999988


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      +.
T Consensus        82 a~   83 (338)
T d1udca_          82 GL   83 (338)
T ss_dssp             SC
T ss_pred             Cc
Confidence            64

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.12  E-value=0.099  Score=43.55  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHH-HHHH--CCCEEEEEecCc-hHH-HHHhc----CCCee----eeCCChHHHHH----Hhc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQ-LLKA--WDIEVVTTCSGD-AKD-LVTSL----NPNLV----IDYNEPEAMHS----IAG  250 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~-la~~--~G~~Vi~~~~~~-~~~-~~~~l----g~~~v----~~~~~~~~~~~----i~~  250 (383)
                      .|+.++|+||++++|.++++ ||+.  .|++|+.+.+++ +.+ ..+++    +..++    .|..+.+..++    +.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            67899999999999998765 5553  689999999764 332 22222    22222    35455433333    332


Q ss_pred             C-----CCccEEEEcCCC
Q psy9949         251 A-----GPYDVILDAAGI  263 (383)
Q Consensus       251 ~-----~g~d~v~d~~g~  263 (383)
                      .     ...|++++++|.
T Consensus        85 ~~~~~~~~~~~lvnnag~  102 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             hhhhccCceEEEEecccc
Confidence            1     357889988774

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.11  E-value=0.088  Score=41.81  Aligned_cols=88  Identities=15%  Similarity=0.123  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-c
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-D  266 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-~  266 (383)
                      .|++|.|.| .|.+|..++++++.+|++|++.++....+.....+...+   .  ++.+-+.   ..|+|+-+..... .
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~---~--~l~~ll~---~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRV---S--TLQDLLF---HSDCVTLHCGLNEHN  118 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEEC---S--SHHHHHH---HCSEEEECCCCCTTC
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhccccc---c--chhhccc---cCCEEEEeecccccc
Confidence            578999999 999999999999999999999986543333333343211   1  1222222   3678777655322 1


Q ss_pred             ---cccccccccccCCCceEEEe
Q psy9949         267 ---QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       267 ---~~~~~~~~l~~~~~G~~v~~  286 (383)
                         .....++.|+  ++..+|.+
T Consensus       119 ~~li~~~~l~~mk--~~a~lIN~  139 (193)
T d1mx3a1         119 HHLINDFTVKQMR--QGAFLVNT  139 (193)
T ss_dssp             TTSBSHHHHTTSC--TTEEEEEC
T ss_pred             hhhhhHHHHhccC--CCCeEEec
Confidence               1111266778  88888876

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=94.00  E-value=0.086  Score=45.90  Aligned_cols=37  Identities=22%  Similarity=0.292  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ++.++|+|+||+|-+|..++..+...|.+|++++++.
T Consensus         1 ~~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~   37 (350)
T d1xgka_           1 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSL   37 (350)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCc
Confidence            3568999999999999999999999999999999753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.022  Score=49.12  Aligned_cols=69  Identities=23%  Similarity=0.166  Sum_probs=44.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec--CchHHHHHhc-CCC--eeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS--GDAKDLVTSL-NPN--LVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~--~~~~~~~~~l-g~~--~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      ++|||+||+|-+|..++..+...|.+|+++++  ..+.+..... ...  .+.+.+.   .+.  ...++|+||.+++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~--~~~~~d~VihlAa~   75 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV---VEP--LYIEVDQIYHLASP   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT---TSC--CCCCCSEEEECCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH---HHH--HHcCCCEEEECccc
Confidence            57999999999999999988888999999873  2222222221 111  2233221   111  11369999998764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.91  E-value=0.1  Score=45.36  Aligned_cols=75  Identities=20%  Similarity=0.253  Sum_probs=48.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--ch---HH---HHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG--DA---KD---LVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~--~~---~~---~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      +.|||+||+|=+|..++..+...|.+|+++++.  ..   ..   ....-+...+ .|-.+....+.+....++|+||.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            579999999999999999888889999998632  11   11   1122233322 344444333333334589999998


Q ss_pred             CCCC
Q psy9949         261 AGIP  264 (383)
Q Consensus       261 ~g~~  264 (383)
                      ++..
T Consensus        82 Aa~~   85 (347)
T d1z45a2          82 AGLK   85 (347)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            8753

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=93.75  E-value=0.021  Score=47.59  Aligned_cols=98  Identities=15%  Similarity=0.171  Sum_probs=60.3

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCc-hHHHHH----hc-CCCeeeeCCChHHHHHHhc
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWD--IEVVTTCSGD-AKDLVT----SL-NPNLVIDYNEPEAMHSIAG  250 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G--~~Vi~~~~~~-~~~~~~----~l-g~~~v~~~~~~~~~~~i~~  250 (383)
                      ..++    ++|++||=.|  .|.|.++..+|+..|  .+|+++..++ ..+.++    ++ +.+++- ....++.+.+ .
T Consensus        80 ~l~i----~pG~rVLEiG--~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~-~~~~Di~~~~-~  151 (250)
T d1yb2a1          80 RCGL----RPGMDILEVG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVR-TSRSDIADFI-S  151 (250)
T ss_dssp             -CCC----CTTCEEEEEC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEE-EECSCTTTCC-C
T ss_pred             HcCC----CCcCEEEEee--eeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceE-EEEeeeeccc-c
Confidence            5677    9999999998  345788888998765  4899999554 344443    33 233331 1111222111 2


Q ss_pred             CCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         251 AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 ~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...+|.||-....+......+.++|+  |+|+++.+
T Consensus       152 ~~~fD~V~ld~p~p~~~l~~~~~~LK--pGG~lv~~  185 (250)
T d1yb2a1         152 DQMYDAVIADIPDPWNHVQKIASMMK--PGSVATFY  185 (250)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEE--EEEEEEEE
T ss_pred             cceeeeeeecCCchHHHHHHHHHhcC--CCceEEEE
Confidence            24699988666555432222378899  99999876

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.74  E-value=0.069  Score=46.14  Aligned_cols=75  Identities=16%  Similarity=0.200  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch---HHHHH-------hcCCC--ee--eeCCChHHHHHHhcCCCcc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA---KDLVT-------SLNPN--LV--IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~---~~~~~-------~lg~~--~v--~~~~~~~~~~~i~~~~g~d  255 (383)
                      +++||+||+|-+|..++..+...|.+|+++++...   .....       .....  .+  .|..+........+..++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            57999999999999999999999999999995321   11111       11111  11  1333333223322335799


Q ss_pred             EEEEcCCCC
Q psy9949         256 VILDAAGIP  264 (383)
Q Consensus       256 ~v~d~~g~~  264 (383)
                      +|+.+++..
T Consensus        82 ~Vih~Aa~~   90 (339)
T d1n7ha_          82 EVYNLAAQS   90 (339)
T ss_dssp             EEEECCSCC
T ss_pred             hhhhccccc
Confidence            999998763

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.71  E-value=0.18  Score=37.34  Aligned_cols=75  Identities=29%  Similarity=0.459  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEec-CchHHHHHhcCCCeeeeCCChHHHHHHhc---CCCccEEEEcCCCCc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCS-GDAKDLVTSLNPNLVIDYNEPEAMHSIAG---AGPYDVILDAAGIPL  265 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~i~~---~~g~d~v~d~~g~~~  265 (383)
                      +|.|.|++|-+|..+++..... +.++.+..+ .+.......-++|-++|...++......+   ..+..+|+-++|-..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~~   80 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTA   80 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccch
Confidence            5899999999999998887654 667777663 33334444445565666555443322221   135566666666543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.69  E-value=0.23  Score=36.37  Aligned_cols=73  Identities=15%  Similarity=0.201  Sum_probs=49.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH-HhcCCCeeee--CCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV-TSLNPNLVID--YNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~-~~lg~~~v~~--~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +|+|.| .|.+|..+++.+...|.+|++++.++ +.+.+ .+++.. ++.  ..+..+-+.. ....+|.++-+++....
T Consensus         2 ~IvI~G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~-~i~~a~~vv~~t~~d~~   78 (132)
T d1lssa_           2 YIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDA-GIEDADMYIAVTGKEEV   78 (132)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHT-TTTTCSEEEECCSCHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhc-ChhhhhhhcccCCcHHH
Confidence            689999 79999999999999999999999654 44444 445653 443  3333322211 12478999988877643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=93.63  E-value=0.043  Score=45.63  Aligned_cols=33  Identities=18%  Similarity=0.317  Sum_probs=29.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      +.|||+||++++|+++++.+...|++|+.++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~   34 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR   34 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            468999999999999999999999999999854

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=93.54  E-value=0.075  Score=39.25  Aligned_cols=73  Identities=22%  Similarity=0.329  Sum_probs=49.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeee-eCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVI-DYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      +++|.| .|.+|..+++.+...|.+|++++.+ ++.+.+++.+...++ |..+.+.-+.. ....+|.++-+++...
T Consensus         2 ~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a-~i~~a~~vi~~~~~~~   76 (134)
T d2hmva1           2 QFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSL-GIRNFEYVIVAIGANI   76 (134)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHH-TGGGCSEEEECCCSCH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhcc-CCccccEEEEEcCchH
Confidence            578888 8999999999999999999999965 455666666654332 33333322221 1235888888887654

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.49  E-value=0.15  Score=43.27  Aligned_cols=112  Identities=13%  Similarity=0.111  Sum_probs=67.1

Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-H----HHHHh
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-K----DLVTS  230 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~----~~~~~  230 (383)
                      ..++++|---      -..-+.+..++    ++|++||=.|  .|.|..++.+|+..|++|++++-+++ .    +.+++
T Consensus        39 ~~tL~~Aq~~------k~~~~~~~l~l----~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~  106 (291)
T d1kpia_          39 DMTLEEAQYA------KRKLALDKLNL----EPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDE  106 (291)
T ss_dssp             TCCHHHHHHH------HHHHHHHTTCC----CTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHH------HHHHHHHhcCC----CCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHh
Confidence            3456666322      22334457778    9999999998  45666788999999999999985543 2    34445


Q ss_pred             cCCCeee--eCCChHHHHHHhcCCCccEEEEcCCCCcc--------------cccccccccccCCCceEEEe
Q psy9949         231 LNPNLVI--DYNEPEAMHSIAGAGPYDVILDAAGIPLD--------------QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       231 lg~~~v~--~~~~~~~~~~i~~~~g~d~v~d~~g~~~~--------------~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .|....+  ...+..+     ..+.||.|+..-.....              ....+.++|+  |+|++++-
T Consensus       107 ~~l~~~v~~~~~d~~~-----~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lk--pgG~~~l~  171 (291)
T d1kpia_         107 VDSPRRKEVRIQGWEE-----FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP--DDGRMLLH  171 (291)
T ss_dssp             SCCSSCEEEEECCGGG-----CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSC--TTCEEEEE
T ss_pred             hccchhhhhhhhcccc-----cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCC--CCCceEEE
Confidence            5644222  2222111     12469988753322221              1111257889  99999763

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.47  E-value=0.13  Score=40.85  Aligned_cols=86  Identities=19%  Similarity=0.123  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL--  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~--  265 (383)
                      .|++|.|.| .|.+|..++++++.+|++|++.++..+..... .+. .   .  .++.+-+.   ..|+++-+..-..  
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-~~~-~---~--~~l~~~l~---~sDii~~~~plt~~T  110 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-KGY-Y---V--DSLDDLYK---QADVISLHVPDVPAN  110 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-TTC-B---C--SCHHHHHH---HCSEEEECSCCCGGG
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc-cee-e---e--cccccccc---ccccccccCCccccc
Confidence            478999999 99999999999999999999988543322211 121 1   1  12333222   3788888765322  


Q ss_pred             --ccccccccccccCCCceEEEe
Q psy9949         266 --DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       266 --~~~~~~~~~l~~~~~G~~v~~  286 (383)
                        ......++.|+  ++..+|.+
T Consensus       111 ~~li~~~~l~~mk--~~a~lIN~  131 (197)
T d1j4aa1         111 VHMINDESIAKMK--QDVVIVNV  131 (197)
T ss_dssp             TTCBSHHHHHHSC--TTEEEEEC
T ss_pred             cccccHHHHhhhC--CccEEEec
Confidence              11111266777  78788776

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.41  E-value=0.18  Score=39.52  Aligned_cols=87  Identities=21%  Similarity=0.040  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL--  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~--  265 (383)
                      .++++.|.| .|.+|..++++++.+|++|++.++..+.+.....+...    .  ++.+-+.   ..|+|+-+..-..  
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~----~--~l~ell~---~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIEL----L--SLDDLLA---RADFISVHLPKTPET  112 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEE----C--CHHHHHH---HCSEEEECCCCSTTT
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCcee----c--cHHHHHh---hCCEEEEcCCCCchh
Confidence            578999999 99999999999999999999998654443333444321    1  1222222   3788887665322  


Q ss_pred             --ccccccccccccCCCceEEEe
Q psy9949         266 --DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       266 --~~~~~~~~~l~~~~~G~~v~~  286 (383)
                        ......++.|+  ++..+|.+
T Consensus       113 ~~lin~~~l~~mk--~~a~lIN~  133 (184)
T d1ygya1         113 AGLIDKEALAKTK--PGVIIVNA  133 (184)
T ss_dssp             TTCBCHHHHTTSC--TTEEEEEC
T ss_pred             hhhhhHHHHhhhC--CCceEEEe
Confidence              12222267788  88888876

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=93.17  E-value=0.062  Score=46.76  Aligned_cols=37  Identities=32%  Similarity=0.356  Sum_probs=33.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ++|++|||+||+|=+|..+++.+...|.+|++++++.
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~   45 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA   45 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCc
Confidence            7899999999999999999988888899999999764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.15  E-value=0.1  Score=40.90  Aligned_cols=84  Identities=18%  Similarity=0.164  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc--
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL--  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~--  265 (383)
                      .|++|.|.| .|.+|...+++++.+|++|++.++..+..      .....    .++.+-+   ...|+|+-+..-..  
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~------~~~~~----~~l~ell---~~sDiv~~~~pl~~~t  106 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEG------PWRFT----NSLEEAL---REARAAVCALPLNKHT  106 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCS------SSCCB----SCSHHHH---TTCSEEEECCCCSTTT
T ss_pred             cCceEEEec-cccccccceeeeecccccccccccccccc------ceeee----echhhhh---hccchhhccccccccc
Confidence            578999999 99999999999999999999998653211      11111    1222222   35888888765321  


Q ss_pred             --ccccccccccccCCCceEEEec
Q psy9949         266 --DQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       266 --~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                        ......++.++  ++..+|.++
T Consensus       107 ~~li~~~~l~~mk--~~ailIN~~  128 (181)
T d1qp8a1         107 RGLVKYQHLALMA--EDAVFVNVG  128 (181)
T ss_dssp             TTCBCHHHHTTSC--TTCEEEECS
T ss_pred             ccccccceeeecc--ccceEEecc
Confidence              11222267788  888888873

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.03  E-value=0.4  Score=36.06  Aligned_cols=93  Identities=18%  Similarity=0.177  Sum_probs=60.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCch----HHHHHhcCCCeeeeCCChHH---HHHHhc----------
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGDA----KDLVTSLNPNLVIDYNEPEA---MHSIAG----------  250 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~~----~~~~~~lg~~~v~~~~~~~~---~~~i~~----------  250 (383)
                      ++|.|+|++|.+|..+..+.+..  .++|++..-..+    .+.++++....+.-.+....   .+.+..          
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            78999999999999999999976  458988883332    24667888887754443221   111110          


Q ss_pred             ------CCCccEEEEcCCCCcccccccccccccCCCceEEE
Q psy9949         251 ------AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       251 ------~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~  285 (383)
                            ...+|+++.+..+-...... +.+++  .+-++.+
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~t-l~ai~--~gk~iaL  120 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKAT-LAAIR--KGKTVAL  120 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHH-HHHHH--TTSEEEE
T ss_pred             chheecccccceeeeecCchhHHHHH-HHHHh--cCCEEEE
Confidence                  13589999986665543332 66666  5545444

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.90  E-value=0.048  Score=36.24  Aligned_cols=33  Identities=33%  Similarity=0.355  Sum_probs=29.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ++|.|.| +|.+|.+.++-++.+|.++++.+.++
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            4799999 89999999999999999999999543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.88  E-value=0.14  Score=40.90  Aligned_cols=68  Identities=19%  Similarity=0.225  Sum_probs=43.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcC-CCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGA-GPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~-~g~d~v~d~~g~~  264 (383)
                      ++|||+||+|-+|..++..+...|.  +|++..++...+.      .. +.....++.+..... ..+|.|+.|+|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~------~~-~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH------PR-LDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC------TT-EECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc------cc-ccccccchhhhhhccccchheeeeeeeee
Confidence            6899999999999999998888886  6776665431110      01 111111222222222 4689999999875

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.86  E-value=0.055  Score=45.35  Aligned_cols=98  Identities=17%  Similarity=0.198  Sum_probs=62.6

Q ss_pred             hhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecC-chHHHHHh----c---CCCee-eeCCChHHHHH
Q psy9949         179 TAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSG-DAKDLVTS----L---NPNLV-IDYNEPEAMHS  247 (383)
Q Consensus       179 ~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~-~~~~~~~~----l---g~~~v-~~~~~~~~~~~  247 (383)
                      ..++    ++|++||=.|  .|.|.+++.||+..|-  +|++++.+ +..+.+++    +   ..+++ +...+  ..+.
T Consensus        91 ~l~i----~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d--~~~~  162 (264)
T d1i9ga_          91 EGDI----FPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD--LADS  162 (264)
T ss_dssp             HTTC----CTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC--GGGC
T ss_pred             HhCC----CCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc--cccc
Confidence            5677    9999999998  5678899999998764  99999944 44444432    2   12333 22221  1111


Q ss_pred             HhcCCCccEEEEcCCCCcccccccccccccCCCceEEEe
Q psy9949         248 IAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       248 i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      -.....+|.||--...+......+.++|+  ++|+++.+
T Consensus       163 ~~~~~~fDaV~ldlp~P~~~l~~~~~~Lk--pGG~lv~~  199 (264)
T d1i9ga_         163 ELPDGSVDRAVLDMLAPWEVLDAVSRLLV--AGGVLMVY  199 (264)
T ss_dssp             CCCTTCEEEEEEESSCGGGGHHHHHHHEE--EEEEEEEE
T ss_pred             cccCCCcceEEEecCCHHHHHHHHHhccC--CCCEEEEE
Confidence            01124699887766665543333378899  99999886

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.74  E-value=0.39  Score=37.07  Aligned_cols=95  Identities=19%  Similarity=0.122  Sum_probs=59.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC--ch-HHHHHhcCCCeeeeCCC--hHHHHHHhc--------CCCccE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG--DA-KDLVTSLNPNLVIDYNE--PEAMHSIAG--------AGPYDV  256 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~--~~-~~~~~~lg~~~v~~~~~--~~~~~~i~~--------~~g~d~  256 (383)
                      +|.|.| .|-+|...+..+.... .+++++.+.  .. ...+.+.+.+......+  ..+.+.-..        ..++|+
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv   82 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI   82 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence            689999 9999999888887654 588888732  22 34555666543321111  111111000        137999


Q ss_pred             EEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       257 v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      |+||+|.-.....+ -..+.  .+.+.|..+++
T Consensus        83 ViEcTG~f~~~~~~-~~hl~--~G~k~Vi~s~~  112 (172)
T d2czca2          83 IVDATPGGIGAKNK-PLYEK--AGVKAIFQGGE  112 (172)
T ss_dssp             EEECCSTTHHHHHH-HHHHH--HTCEEEECTTS
T ss_pred             EEECCCCCCCHHHH-HHHHH--cCCCEEEECCC
Confidence            99999987765542 45666  67788887654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=92.68  E-value=0.18  Score=38.55  Aligned_cols=65  Identities=11%  Similarity=0.052  Sum_probs=46.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCC-CeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNP-NLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~-~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|.|.| .|.+|...+..++..|.+|++.++++ ..+.+++.+. +...+ ..    +   .....|+||-|+...
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~-~~----~---~~~~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ-DL----S---LLQTAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES-CG----G---GGTTCSEEEECSCHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee-ec----c---cccccccccccCcHh
Confidence            588998 89999998888888999999988654 4567777774 33221 11    1   124689999887543

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.58  E-value=0.26  Score=37.47  Aligned_cols=71  Identities=18%  Similarity=0.346  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCchHHH-HHHHHHHHCCC-EEEEEecCc----hHHHHHhcCCCeeeeCCChHHHHHHh---cCCCccEEE
Q psy9949         188 RDKRVLVLGASGGVGT-MAVQLLKAWDI-EVVTTCSGD----AKDLVTSLNPNLVIDYNEPEAMHSIA---GAGPYDVIL  258 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~-~ai~la~~~G~-~Vi~~~~~~----~~~~~~~lg~~~v~~~~~~~~~~~i~---~~~g~d~v~  258 (383)
                      +.-+|.|.| +|.+|. ..+++++.... +++++++.+    ...+++++|....  +..   .+.+.   +..++|+||
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~--~~~---~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAG---VEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSH---HHHHHHSGGGGGEEEEE
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccc--ccc---eeeeeecccccccCEEE
Confidence            345799999 999987 56788887655 888888432    2357788886532  221   12222   234799999


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      +++...
T Consensus        77 ~ATpag   82 (157)
T d1nvmb1          77 DATSAS   82 (157)
T ss_dssp             ECSCHH
T ss_pred             EcCCch
Confidence            998753

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.56  E-value=0.12  Score=45.13  Aligned_cols=75  Identities=16%  Similarity=0.171  Sum_probs=45.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc---hHHHHHhc------CCCee----eeCCChHHHHHHhcCCCccE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD---AKDLVTSL------NPNLV----IDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~---~~~~~~~l------g~~~v----~~~~~~~~~~~i~~~~g~d~  256 (383)
                      +.|||+||+|-+|..++..+...|.+|+++++..   ..+.+..+      ....+    .|-.+......+.....+|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            5789999999999999999998899999999532   11111111      11111    13334333333333346899


Q ss_pred             EEEcCCCC
Q psy9949         257 ILDAAGIP  264 (383)
Q Consensus       257 v~d~~g~~  264 (383)
                      |+.+++..
T Consensus        82 v~h~aa~~   89 (357)
T d1db3a_          82 VYNLGAMS   89 (357)
T ss_dssp             EEECCCCC
T ss_pred             EEEeeccc
Confidence            99998753

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=92.47  E-value=0.077  Score=45.09  Aligned_cols=36  Identities=25%  Similarity=0.303  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASG--GVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g--~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +|+++||+||+|  ++|.++++.+...|++|+...+++
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~   44 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            789999999876  899999999999999999887653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=92.40  E-value=0.22  Score=41.23  Aligned_cols=91  Identities=15%  Similarity=0.120  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH----HhcCCC-eeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV----TSLNPN-LVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~----~~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      +++++||=.| +| .|.+++.+++ .|++|++++-+ +..+.+    +..+.. .++..+   ..+ ....+.||+|+..
T Consensus       119 ~~g~~VLDiG-cG-sG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d---~~~-~~~~~~fD~V~an  191 (254)
T d2nxca1         119 RPGDKVLDLG-TG-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGS---LEA-ALPFGPFDLLVAN  191 (254)
T ss_dssp             CTTCEEEEET-CT-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESC---HHH-HGGGCCEEEEEEE
T ss_pred             CccCEEEEcc-cc-hhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEecc---ccc-cccccccchhhhc
Confidence            7899999998 44 4777776665 68999999944 434433    334443 333322   122 2234679999865


Q ss_pred             CCCCcc--cccccccccccCCCceEEEe
Q psy9949         261 AGIPLD--QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       261 ~g~~~~--~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ......  ....+.++++  |+|+++..
T Consensus       192 i~~~~l~~l~~~~~~~Lk--pGG~lilS  217 (254)
T d2nxca1         192 LYAELHAALAPRYREALV--PGGRALLT  217 (254)
T ss_dssp             CCHHHHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             cccccHHHHHHHHHHhcC--CCcEEEEE
Confidence            443322  1111257789  99999874

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.38  E-value=0.11  Score=38.28  Aligned_cols=31  Identities=19%  Similarity=0.282  Sum_probs=26.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      +|.|+|++|-+|.+..+++...+.++++..+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC
Confidence            5899999999999999999999987776653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.92  E-value=0.28  Score=40.20  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      -.|.+|+|.| .|.+|..+++++...|++|+++.+.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            3789999999 9999999999999999999988843

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.91  E-value=0.14  Score=40.28  Aligned_cols=92  Identities=12%  Similarity=0.071  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHH----HHHhcCC-Cee--eeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKD----LVTSLNP-NLV--IDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~----~~~~lg~-~~v--~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      +++++||=.|  .|.|..++.+|+. +.+|++++.+ +..+    .+++.|. +++  +..+   ..+.+.+...+|.|+
T Consensus        32 ~~g~~VLDiG--cGsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gd---a~~~~~~~~~~D~v~  105 (186)
T d1l3ia_          32 GKNDVAVDVG--CGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD---APEALCKIPDIDIAV  105 (186)
T ss_dssp             CTTCEEEEES--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC---HHHHHTTSCCEEEEE
T ss_pred             CCCCEEEEEE--CCeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECc---hhhcccccCCcCEEE
Confidence            8999999998  3456667777764 5699999955 3333    3445664 333  3222   233333446799998


Q ss_pred             EcCCCCcc--cccccccccccCCCceEEEe
Q psy9949         259 DAAGIPLD--QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~g~~~~--~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ...+....  ....+.+.++  ++|+++..
T Consensus       106 ~~~~~~~~~~~~~~~~~~Lk--pgG~lvi~  133 (186)
T d1l3ia_         106 VGGSGGELQEILRIIKDKLK--PGGRIIVT  133 (186)
T ss_dssp             ESCCTTCHHHHHHHHHHTEE--EEEEEEEE
T ss_pred             EeCccccchHHHHHHHHHhC--cCCEEEEE
Confidence            65443322  1111256788  99998764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.85  E-value=0.19  Score=42.01  Aligned_cols=76  Identities=13%  Similarity=0.208  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch----H---HHHH---hcCCCeeeeCCChHHHHHHhcCCCccEEE
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA----K---DLVT---SLNPNLVIDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~----~---~~~~---~lg~~~v~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .++|||+||+|-+|..++..+...|.+|+++++...    .   ....   ..+. .++..+..+.........+.+.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCc-EEEEeecccchhhhhhhhhceeee
Confidence            357999999999999999999989999999996431    1   1111   2233 233222222222222224688888


Q ss_pred             EcCCCCc
Q psy9949         259 DAAGIPL  265 (383)
Q Consensus       259 d~~g~~~  265 (383)
                      .+.+...
T Consensus        82 ~~~~~~~   88 (307)
T d1qyca_          82 STVGSLQ   88 (307)
T ss_dssp             ECCCGGG
T ss_pred             ecccccc
Confidence            8877544

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.82  E-value=1.1  Score=34.55  Aligned_cols=92  Identities=14%  Similarity=0.095  Sum_probs=56.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCc--h-HHHHHhcCCCe-eeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGD--A-KDLVTSLNPNL-VIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~--~-~~~~~~lg~~~-v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      ++.|.| +|.+|...+..++.. +++++++++..  + .+++++++... .-.+++  +. .+.+...+|+|+-++....
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~--~~-~ll~~~~iD~v~I~tp~~~   78 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGS--YE-SLLEDPEIDALYVPLPTSL   78 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESS--HH-HHHHCTTCCEEEECCCGGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCc--HH-Hhhhccccceeeecccchh
Confidence            578999 899998888877766 56999887543  2 24556666431 111222  33 3333457999998887655


Q ss_pred             ccccccccccccCCCceEEEecCCC
Q psy9949         266 DQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       266 ~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      -...+ ..++.   .|.=|.+..|.
T Consensus        79 h~~~~-~~~l~---~g~~v~~EKP~   99 (184)
T d1ydwa1          79 HVEWA-IKAAE---KGKHILLEKPV   99 (184)
T ss_dssp             HHHHH-HHHHT---TTCEEEECSSC
T ss_pred             hcchh-hhhhh---ccceeeccccc
Confidence            43331 44454   45666665543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.63  E-value=0.67  Score=35.56  Aligned_cols=95  Identities=17%  Similarity=0.150  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHh----cCCCee---eeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTS----LNPNLV---IDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~----lg~~~v---~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      -.|++|+|.|-+.-+|.=+..++...|+.|+...+....++.+.    .-...+   ..+....+.+..   ...|+++-
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~---~~aDIvIs  103 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCS---LDSDVVIT  103 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHH---HHCSEEEE
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhcc---ccCCEEEE
Confidence            36899999998888999888888888999986654322111111    111111   112211122222   24899999


Q ss_pred             cCCCCcccccccccccccCCCceEEEecC
Q psy9949         260 AAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       260 ~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      ++|.+.....  -+.++  ++..++++|.
T Consensus       104 avG~p~~~i~--~d~ik--~GavvIDvGi  128 (171)
T d1edza1         104 GVPSENYKFP--TEYIK--EGAVCINFAC  128 (171)
T ss_dssp             CCCCTTCCBC--TTTSC--TTEEEEECSS
T ss_pred             ccCCCccccC--hhhcc--cCceEeeccc
Confidence            9999875333  56778  8888888864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.56  E-value=1.2  Score=34.10  Aligned_cols=94  Identities=18%  Similarity=0.123  Sum_probs=63.8

Q ss_pred             hhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHH
Q psy9949         165 VLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEA  244 (383)
Q Consensus       165 l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~  244 (383)
                      +||+....+..|. .-++.   -.|++|+|.|.+.-+|.-+..++...|++|+...+...                  +.
T Consensus        19 ~PcTp~aii~lL~-~~~i~---l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~------------------~l   76 (170)
T d1a4ia1          19 IPCTPKGCLELIK-ETGVP---IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA------------------HL   76 (170)
T ss_dssp             CCHHHHHHHHHHH-TTTCC---CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS------------------SH
T ss_pred             CCChHHHHHHHHH-HhCcc---cccceEEEEecCCccchHHHHHHHhccCceEEEecccc------------------cH
Confidence            4555554455554 33331   37899999999999999999999999999998774321                  11


Q ss_pred             HHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         245 MHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       245 ~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .+.+   ...|+++-++|.+....   -+.++  ++..++++|.
T Consensus        77 ~~~~---~~aDivi~a~G~~~~i~---~~~vk--~g~iviDvgi  112 (170)
T d1a4ia1          77 DEEV---NKGDILVVATGQPEMVK---GEWIK--PGAIVIDCGI  112 (170)
T ss_dssp             HHHH---TTCSEEEECCCCTTCBC---GGGSC--TTCEEEECCC
T ss_pred             HHHH---hhccchhhccccccccc---ccccc--CCCeEeccCc
Confidence            1111   24788888888877633   45677  7888888764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.52  E-value=0.7  Score=35.50  Aligned_cols=94  Identities=16%  Similarity=0.156  Sum_probs=56.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-c--hHHHHHhcCCCeeeeCCCh--HHHHH-Hh------c-CCCccE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-D--AKDLVTSLNPNLVIDYNEP--EAMHS-IA------G-AGPYDV  256 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~--~~~~~~~lg~~~v~~~~~~--~~~~~-i~------~-~~g~d~  256 (383)
                      +|.|.| .|-+|..+.+++...+ .+++++... .  ....+..++.+......+.  .+.+. +.      + ..++|+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            689999 9999999999887665 488888732 2  2234455555432221111  11110 00      0 137999


Q ss_pred             EEEcCCCCcccccccccccccCCCceEEEecC
Q psy9949         257 ILDAAGIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       257 v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      |+||+|.-.....+ -..+.  .+-+.|..++
T Consensus        82 ViEcTG~f~~~~~~-~~hl~--~G~K~vi~~~  110 (171)
T d1cf2o1          82 VIDCTPEGIGAKNL-KMYKE--KGIKAIFQGG  110 (171)
T ss_dssp             EEECCSTTHHHHHH-HHHHH--TTCEEEECTT
T ss_pred             EEEccCCCCCHHHH-HHHHH--cCCCEEEECC
Confidence            99999986654442 45566  6667776543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.37  E-value=0.47  Score=32.65  Aligned_cols=70  Identities=14%  Similarity=0.209  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEecCc--hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         187 PRDKRVLVLGASGGVGTMA-VQLLKAWDIEVVTTCSGD--AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~a-i~la~~~G~~Vi~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +..+++.+.| -|++|..+ +++++..|.+|.+.+...  ..+.+.+.|.. +........      ..+.|.|+-..+-
T Consensus         6 ~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~-v~~g~~~~~------i~~~d~vV~S~AI   77 (96)
T d1p3da1           6 RRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAK-IYIGHAEEH------IEGASVVVVSSAI   77 (96)
T ss_dssp             TTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCE-EEESCCGGG------GTTCSEEEECTTS
T ss_pred             hhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCe-EEECCcccc------CCCCCEEEECCCc
Confidence            5678899999 88889665 899999999999999543  34566778875 333222221      1357887765554


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      +
T Consensus        78 ~   78 (96)
T d1p3da1          78 K   78 (96)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.28  E-value=0.53  Score=38.10  Aligned_cols=70  Identities=19%  Similarity=0.081  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHH-HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKD-LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~  265 (383)
                      .|.+|+|.| .|.+|..+++++...|+++++++.+ .+.+ .....|...+ + .+.-+      ...+|+.+=|+-+..
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~-~~~~~------~~~cDIl~PcA~~~~  108 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-A-PNAIY------GVTCDIFAPCALGAV  108 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-C-GGGTT------TCCCSEEEECSCSCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-C-Ccccc------cccccEecccccccc
Confidence            688999999 9999999999999999999988744 3433 4445565322 1 11111      135777777766544


Q ss_pred             c
Q psy9949         266 D  266 (383)
Q Consensus       266 ~  266 (383)
                      .
T Consensus       109 I  109 (230)
T d1leha1         109 L  109 (230)
T ss_dssp             B
T ss_pred             c
Confidence            4

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.19  E-value=0.25  Score=42.55  Aligned_cols=119  Identities=22%  Similarity=0.210  Sum_probs=66.7

Q ss_pred             cccccCCCC---CCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecC
Q psy9949         148 ALVHKKPSN---ISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSG  222 (383)
Q Consensus       148 ~~~~~ip~~---~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~  222 (383)
                      +++..+|..   +-+.+++.+.           ...++    ++|++||=.| + |.|.+++.||+..|.  +|+++...
T Consensus        70 d~~~~~~r~tqiiypkD~~~Il-----------~~l~i----~pG~rVLE~G-t-GsG~lt~~LAr~vg~~G~V~t~E~~  132 (324)
T d2b25a1          70 DYVVLMKRGTAITFPKDINMIL-----------SMMDI----NPGDTVLEAG-S-GSGGMSLFLSKAVGSQGRVISFEVR  132 (324)
T ss_dssp             HHHHHSCCSSCCCCHHHHHHHH-----------HHHTC----CTTCEEEEEC-C-TTSHHHHHHHHHHCTTCEEEEEESS
T ss_pred             HHhhccCCCCcccccccHHHHH-----------HHhCC----CCCCEEEEec-c-cccHHHHHHHHHhCCCcEEEEecCC
Confidence            455555554   4455554332           25577    9999999998 3 559999999998865  89999954


Q ss_pred             -chHHHHHh----cC-----------CCee--eeCCChHHHHHHhcCCCccEEEEcCCCCcccccccccccccCCCceEE
Q psy9949         223 -DAKDLVTS----LN-----------PNLV--IDYNEPEAMHSIAGAGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFV  284 (383)
Q Consensus       223 -~~~~~~~~----lg-----------~~~v--~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v  284 (383)
                       +..+.+++    ++           .+++  ...+-.++...+ ....+|.||=-...+......+.++|+  |+|+++
T Consensus       133 ~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~~~~~-~~~~fD~V~LD~p~P~~~l~~~~~~LK--pGG~lv  209 (324)
T d2b25a1         133 KDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI-KSLTFDAVALDMLNPHVTLPVFYPHLK--HGGVCA  209 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--------EEEEEECSSSTTTTHHHHGGGEE--EEEEEE
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhccccc-CCCCcceEeecCcCHHHHHHHHHHhcc--CCCEEE
Confidence             33343321    11           1222  111111111111 113588877544444322222278899  999999


Q ss_pred             Ee
Q psy9949         285 TL  286 (383)
Q Consensus       285 ~~  286 (383)
                      .+
T Consensus       210 ~~  211 (324)
T d2b25a1         210 VY  211 (324)
T ss_dssp             EE
T ss_pred             EE
Confidence            87

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.94  E-value=0.17  Score=43.62  Aligned_cols=72  Identities=29%  Similarity=0.279  Sum_probs=44.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC-chHHHH-HhcCCCee-eeCCC-hHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG-DAKDLV-TSLNPNLV-IDYNE-PEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~-~~~~~~-~~lg~~~v-~~~~~-~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|||+||+|-+|..+++.+...| .+|++++.. .+.... .......+ .|-.+ .++.+...  .++|+||.+++-.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~--~~~d~Vih~a~~~   78 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV--KKCDVVLPLVAIA   78 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH--HHCSEEEECBCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH--hCCCccccccccc
Confidence            59999999999999998887777 599999843 232222 22222222 12222 23333222  3699999988753

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.92  E-value=0.048  Score=46.28  Aligned_cols=114  Identities=15%  Similarity=0.102  Sum_probs=63.8

Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHH----HHh
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDL----VTS  230 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~----~~~  230 (383)
                      ..++++|-.-      -+.-+.+..++    ++|++||=.| +| .|..+..+++..|++|++++-++ ..+.    +++
T Consensus        30 ~~tL~~AQ~~------k~~~~~~~l~l----~~g~~VLDiG-CG-~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~   97 (280)
T d2fk8a1          30 ELTLEEAQYA------KVDLNLDKLDL----KPGMTLLDIG-CG-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLAS   97 (280)
T ss_dssp             TCCHHHHHHH------HHHHHHTTSCC----CTTCEEEEES-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHH------HHHHHHHHcCC----CCCCEEEEec-CC-chHHHHHHHHhCceeEEEecchHHHHHHHHHHHHh
Confidence            3456666421      22334446677    9999999999 44 45567888988899999999554 3333    344


Q ss_pred             cCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc-------cccccccccccCCCceEEEe
Q psy9949         231 LNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD-------QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       231 lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~-------~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .|....+.....++.+   -.+.+|.|+..---...       ....+.++|+  |+|++++-
T Consensus        98 ~~l~~~~~~~~~d~~~---~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lk--pgG~~~i~  155 (280)
T d2fk8a1          98 IDTNRSRQVLLQGWED---FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMP--ADGRMTVQ  155 (280)
T ss_dssp             SCCSSCEEEEESCGGG---CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSC--TTCEEEEE
T ss_pred             hccccchhhhhhhhhh---hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccC--CCceEEEE
Confidence            4532111111111110   12468888643322211       1111256789  99999763

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=90.88  E-value=0.086  Score=43.13  Aligned_cols=92  Identities=17%  Similarity=0.239  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC--
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI--  263 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~--  263 (383)
                      +++.+||=.|  .|.|..+..+++ .|++|++++.+ ...+.+++.+....+..+..++.   ...+.+|+|+.....  
T Consensus        41 ~~~~~vLDiG--cG~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~---~~~~~fD~ii~~~~~~~  114 (246)
T d2avna1          41 KNPCRVLDLG--GGTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP---FPSGAFEAVLALGDVLS  114 (246)
T ss_dssp             CSCCEEEEET--CTTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC---SCTTCEEEEEECSSHHH
T ss_pred             CCCCEEEEEC--CCCchhcccccc-cceEEEEeecccccccccccccccccccccccccc---cccccccceeeecchhh
Confidence            6778898887  448888888886 48999999955 45677777666555544333221   112569999864432  


Q ss_pred             ----CcccccccccccccCCCceEEEe
Q psy9949         264 ----PLDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       264 ----~~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                          +......+.++|+  ++|.++..
T Consensus       115 ~~~d~~~~l~~i~r~Lk--~gG~~ii~  139 (246)
T d2avna1         115 YVENKDKAFSEIRRVLV--PDGLLIAT  139 (246)
T ss_dssp             HCSCHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             hhhhHHHHHHHHHhhcC--cCcEEEEE
Confidence                1111112257889  99998764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.85  E-value=0.26  Score=42.49  Aligned_cols=75  Identities=20%  Similarity=0.188  Sum_probs=47.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-------c----hHHHHHhcCCC--eee--eCCChHHHHHHhcCCCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-------D----AKDLVTSLNPN--LVI--DYNEPEAMHSIAGAGPY  254 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-------~----~~~~~~~lg~~--~v~--~~~~~~~~~~i~~~~g~  254 (383)
                      ++|||+||+|=+|..++..+...|.+|+++++.       .    ..+....+...  .++  |-.+....+.+.....+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            689999999999999999998899999998621       0    11222222211  222  44444444443334578


Q ss_pred             cEEEEcCCCC
Q psy9949         255 DVILDAAGIP  264 (383)
Q Consensus       255 d~v~d~~g~~  264 (383)
                      ++++.+++..
T Consensus        83 ~~i~h~Aa~~   92 (346)
T d1ek6a_          83 MAVIHFAGLK   92 (346)
T ss_dssp             EEEEECCSCC
T ss_pred             cccccccccc
Confidence            8888877643

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=90.77  E-value=0.42  Score=36.50  Aligned_cols=89  Identities=10%  Similarity=-0.015  Sum_probs=54.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--EEEEEecC-chHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCccc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSG-DAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQ  267 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~  267 (383)
                      +|+|.| .|.+|...+..++..|.  +|++.+++ +..+.+++.+............     .....|+|+-|+......
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~-----~~~~~dlIila~p~~~~~   76 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV-----EDFSPDFVMLSSPVRTFR   76 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-----GGTCCSEEEECSCHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhh-----hccccccccccCCchhhh
Confidence            699999 89999999988888885  88998865 4567777777532221111110     113578888887754332


Q ss_pred             cc--ccccccccCCCceEEEec
Q psy9949         268 IN--SYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       268 ~~--~~~~~l~~~~~G~~v~~~  287 (383)
                      ..  .+...+.  ++..+++++
T Consensus        77 ~vl~~l~~~~~--~~~ii~d~~   96 (171)
T d2g5ca2          77 EIAKKLSYILS--EDATVTDQG   96 (171)
T ss_dssp             HHHHHHHHHSC--TTCEEEECC
T ss_pred             hhhhhhhcccc--ccccccccc
Confidence            21  1123344  555666553

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.72  E-value=1.1  Score=36.34  Aligned_cols=34  Identities=32%  Similarity=0.517  Sum_probs=29.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHCCCEEEEEec
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLL-KAWDIEVVTTCS  221 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la-~~~G~~Vi~~~~  221 (383)
                      -++.+|+|.| .|.+|..+++.+ +..|++|+++.+
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            3688999999 999999988877 578999998873

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.65  E-value=0.88  Score=34.07  Aligned_cols=86  Identities=17%  Similarity=0.321  Sum_probs=57.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCchH----HHHHhcCCCeeeeCCChHHH---HHH------------
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW--DIEVVTTCSGDAK----DLVTSLNPNLVIDYNEPEAM---HSI------------  248 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~--G~~Vi~~~~~~~~----~~~~~lg~~~v~~~~~~~~~---~~i------------  248 (383)
                      ++|.|+|++|.+|..+..+.+..  ..+|++.+-..+.    +.+.++....++-.++....   ..+            
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            36999999999999999999977  3588888843322    45667888777655443221   111            


Q ss_pred             -------hcCCCccEEEEcCCCCcccccccccccc
Q psy9949         249 -------AGAGPYDVILDAAGIPLDQINSYLPFLK  276 (383)
Q Consensus       249 -------~~~~g~d~v~d~~g~~~~~~~~~~~~l~  276 (383)
                             .....+|+|+.+..+-...... +..++
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t-~~aik  115 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPT-LAAIR  115 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHH-HHHHH
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHH-HHHHh
Confidence                   1123689999987665543332 56666

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=90.42  E-value=0.21  Score=42.48  Aligned_cols=32  Identities=22%  Similarity=0.270  Sum_probs=28.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      ++|||+||+|-+|..++..+...|..++++..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC
Confidence            57999999999999999999888998877764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=90.40  E-value=0.39  Score=37.77  Aligned_cols=88  Identities=11%  Similarity=0.015  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch-HHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA-KDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-  265 (383)
                      .++++.|.| .|.+|...+++++.+|.+|++.++... .......+.   ..+.  ++.+-+.   ..|+|+.+..-.. 
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~---~~~~--~l~~ll~---~sD~v~l~~plt~~  116 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQA---TFHD--SLDSLLS---VSQFFSLNAPSTPE  116 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTC---EECS--SHHHHHH---HCSEEEECCCCCTT
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccccccccchhhcccc---cccC--CHHHHHh---hCCeEEecCCCCch
Confidence            378999999 999999999999999999999885432 222122221   1111  1222222   3688877654321 


Q ss_pred             ---ccccccccccccCCCceEEEe
Q psy9949         266 ---DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       266 ---~~~~~~~~~l~~~~~G~~v~~  286 (383)
                         ......++.|+  ++..+|.+
T Consensus       117 T~~li~~~~l~~mk--~~a~lIN~  138 (191)
T d1gdha1         117 TRYFFNKATIKSLP--QGAIVVNT  138 (191)
T ss_dssp             TTTCBSHHHHTTSC--TTEEEEEC
T ss_pred             HhheecHHHhhCcC--CccEEEec
Confidence               22222267888  88888876

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=90.29  E-value=0.12  Score=43.43  Aligned_cols=63  Identities=21%  Similarity=0.299  Sum_probs=39.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|||+||+|-+|..++..+...| ++++++...+.     +    ..|..+....+.+.+..++|+||.+++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g-~~v~~~~~~~~-----~----~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKE-----F----CGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS-EEEEECTTCSS-----S----CCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC-CEEEEECCCcc-----c----cCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            59999999999999888777666 45555532211     1    1233343333333333468999999874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=90.16  E-value=0.078  Score=44.77  Aligned_cols=100  Identities=18%  Similarity=0.142  Sum_probs=59.6

Q ss_pred             HHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH----HhcCCC-e--eeeCCChHHHHH
Q psy9949         176 LQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV----TSLNPN-L--VIDYNEPEAMHS  247 (383)
Q Consensus       176 l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~----~~lg~~-~--v~~~~~~~~~~~  247 (383)
                      |.....+    +++.+||=.|  +|.|..+..+++..|++|++++-++ ..+.+    ...|.. +  +...+..++.  
T Consensus        59 l~~~~~l----~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~--  130 (282)
T d2o57a1          59 LAMTGVL----QRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--  130 (282)
T ss_dssp             HHHTTCC----CTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--
T ss_pred             HHHhcCC----CCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc--
Confidence            4445666    8999999998  3467788889988899999999443 33333    334432 2  2222211110  


Q ss_pred             HhcCCCccEEEEcCCCCc-----ccccccccccccCCCceEEEe
Q psy9949         248 IAGAGPYDVILDAAGIPL-----DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       248 i~~~~g~d~v~d~~g~~~-----~~~~~~~~~l~~~~~G~~v~~  286 (383)
                       ...+.||+|+-.-.-..     .....+.++|+  |+|+++..
T Consensus       131 -~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lk--pgG~l~~~  171 (282)
T d2o57a1         131 -CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLK--PRGVMAIT  171 (282)
T ss_dssp             -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             -ccccccchhhccchhhhccCHHHHHHHHHHhcC--CCcEEEEE
Confidence             12246999985433211     11122257889  99998875

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=90.14  E-value=0.35  Score=37.56  Aligned_cols=93  Identities=11%  Similarity=0.079  Sum_probs=52.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC--ch-HHHHHhcCCCeeeeCCC-hHHHHHH-------hc-CCCccEE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSG--DA-KDLVTSLNPNLVIDYNE-PEAMHSI-------AG-AGPYDVI  257 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~--~~-~~~~~~lg~~~v~~~~~-~~~~~~i-------~~-~~g~d~v  257 (383)
                      +|.|.| .|-+|..+++.+.... .+++++.+.  .. ...+...+.......+. ..+.+.-       .+ ..++|+|
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            588999 9999999999998764 589988743  22 22333333221111111 0111000       00 0258999


Q ss_pred             EEcCCCCcccccccccccccCCCceEEEec
Q psy9949         258 LDAAGIPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       258 ~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      +||+|.-.....+ -.++.  .+-++|..+
T Consensus        82 iecTG~f~~~e~a-~~hl~--~G~KvIi~~  108 (178)
T d1b7go1          82 VDTTPNGVGAQYK-PIYLQ--LQRNAIFQG  108 (178)
T ss_dssp             EECCSTTHHHHHH-HHHHH--TTCEEEECT
T ss_pred             EECCCCcCCHHHH-HHHHH--cCCEEEEEC
Confidence            9999986654442 44555  444666543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.58  E-value=0.41  Score=39.50  Aligned_cols=34  Identities=26%  Similarity=0.196  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      -++.+|+|.| .|.+|..+++++...|++|+++.+
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            3788999999 999999999999999999998874

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.53  E-value=0.4  Score=36.82  Aligned_cols=94  Identities=17%  Similarity=0.213  Sum_probs=55.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH---HHHHhc----C---CC-------------eeeeCCChHHHHH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK---DLVTSL----N---PN-------------LVIDYNEPEAMHS  247 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~---~~~~~l----g---~~-------------~v~~~~~~~~~~~  247 (383)
                      +|.|.| .|-+|.++.+++...+.+++++-+....   .++-++    |   .+             .+.-+...+ .+.
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~-p~~   79 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD-PKE   79 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS-GGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC-hHH
Confidence            588999 9999999999888778888888744322   222221    1   11             000011111 111


Q ss_pred             HhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         248 IAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       248 i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      +... .|+|+|+||+|.-.....+ ...+.  .+.+-|++..|
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~-~~hl~--~gakkViiSAP  119 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKA-KAHLE--GGAKKVIITAP  119 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHH-THHHH--TTCSEEEESSC
T ss_pred             CcccccCCceeEeccccccchHHh-hhhhc--cccceeeeccc
Confidence            1111 3799999999986654442 56666  66666666544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.31  E-value=1  Score=33.37  Aligned_cols=71  Identities=25%  Similarity=0.316  Sum_probs=43.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchHHHHHhcC-CCeee----eCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAKDLVTSLN-PNLVI----DYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~~~~~~lg-~~~v~----~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|.|.||+|.+|..++.++...|.  ++..++-++....+.++. +....    .....+..+.   ..+.|+|+-+.|.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~---~~~aDivVitag~   78 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDC---LKGCDVVVIPAGV   78 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHH---HTTCSEEEECCSC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHH---hCCCCEEEECCCc
Confidence            689999889999999999998886  666666444333333322 11111    1122233332   2579999988885


Q ss_pred             C
Q psy9949         264 P  264 (383)
Q Consensus       264 ~  264 (383)
                      +
T Consensus        79 ~   79 (144)
T d1mlda1          79 P   79 (144)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.28  E-value=0.29  Score=38.10  Aligned_cols=36  Identities=19%  Similarity=0.146  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ..+++|+|.| +|+.|+.|+..+...|.+|+.....+
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            5678999999 89999999999999999999998654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.23  E-value=0.59  Score=33.64  Aligned_cols=36  Identities=28%  Similarity=0.316  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      .++++|+|.| +|.+|+-++..++.+|.+|..+.+.+
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            4678999999 89999999999999999999987553

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.05  E-value=0.23  Score=38.64  Aligned_cols=33  Identities=27%  Similarity=0.409  Sum_probs=29.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +|.|.||+|++|.++++.+...|++|+...|++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~   34 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            578887799999999999999999999999764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=88.90  E-value=0.58  Score=33.38  Aligned_cols=36  Identities=14%  Similarity=0.100  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      .++++|+|.| +|.+|+-++..++.+|.+|..+.+.+
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            6789999999 89999999999999999999998654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.88  E-value=0.39  Score=41.25  Aligned_cols=32  Identities=25%  Similarity=0.313  Sum_probs=28.8

Q ss_pred             EE-EEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         191 RV-LVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       191 ~V-lI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      +| ||+||+|=+|..++..+...|.+|+++++.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            56 999999999999999998899999999953

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.74  E-value=0.41  Score=34.23  Aligned_cols=36  Identities=19%  Similarity=0.398  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +..++|+|.| +|.+|.-++..++.+|.+|..+.+.+
T Consensus        20 ~~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          20 KESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCCCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            5678999999 89999999999999999999998654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.42  E-value=0.44  Score=33.92  Aligned_cols=37  Identities=16%  Similarity=0.215  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA  224 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~  224 (383)
                      +..++++|.| +|.+|.-+++.+..+|.+|..+.+.++
T Consensus        20 ~~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            3457899999 899999999999999999999986643

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=88.34  E-value=0.33  Score=37.52  Aligned_cols=73  Identities=16%  Similarity=0.049  Sum_probs=48.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCee-------eeCC---ChHHHHHHhcCCCccEEE
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLV-------IDYN---EPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v-------~~~~---~~~~~~~i~~~~g~d~v~  258 (383)
                      +++.|.| +|.+|++++..+...|.+|++.++++ +.+..++.+....       ....   ..+..+.+   ..+|++|
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---~~aD~ii   77 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV---KDADVIL   77 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH---TTCSEEE
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh---cCCCEEE
Confidence            6899999 89999999999999999999999764 4455544332111       0000   01122222   4699999


Q ss_pred             EcCCCCcc
Q psy9949         259 DAAGIPLD  266 (383)
Q Consensus       259 d~~g~~~~  266 (383)
                      -++.....
T Consensus        78 i~v~~~~~   85 (184)
T d1bg6a2          78 IVVPAIHH   85 (184)
T ss_dssp             ECSCGGGH
T ss_pred             EEEchhHH
Confidence            99876643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.26  E-value=0.25  Score=41.27  Aligned_cols=34  Identities=32%  Similarity=0.367  Sum_probs=29.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +++|+|.| +|..|++++..++..|.+|.++...+
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            47899999 89999999999998999999998543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.25  E-value=0.54  Score=36.76  Aligned_cols=88  Identities=15%  Similarity=0.121  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCc-
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPL-  265 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~-  265 (383)
                      .+.++.|.| .|.+|...+++++.+|.+|+..++.. ........+...   ..+  +.+-+   ...|+|+-+..-.. 
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~---~~~--l~~~l---~~sD~v~~~~plt~~  113 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTW---HAT--REDMY---PVCDVVTLNCPLHPE  113 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEE---CSS--HHHHG---GGCSEEEECSCCCTT
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccc---cCC--HHHHH---Hhccchhhccccccc
Confidence            578999999 99999999999999999999999653 333333333221   111  12211   24788877655322 


Q ss_pred             ---ccccccccccccCCCceEEEe
Q psy9949         266 ---DQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       266 ---~~~~~~~~~l~~~~~G~~v~~  286 (383)
                         ......++.|+  ++..+|.+
T Consensus       114 T~~li~~~~l~~mk--~ga~lIN~  135 (188)
T d2naca1         114 TEHMINDETLKLFK--RGAYIVNT  135 (188)
T ss_dssp             TTTCBSHHHHTTSC--TTEEEEEC
T ss_pred             chhhhHHHHHHhCC--CCCEEEec
Confidence               12222267778  88788776

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=88.14  E-value=0.21  Score=37.48  Aligned_cols=71  Identities=21%  Similarity=0.326  Sum_probs=42.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchHH--HHHh-------cCCCeeeeCCChHHHHHHhcCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAKD--LVTS-------LNPNLVIDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~~--~~~~-------lg~~~v~~~~~~~~~~~i~~~~g~d  255 (383)
                      ....+|.|.| +|.+|..++..+...|.  +++.++.++.+.  .+.+       .+...+. ..+      ..+..+.|
T Consensus         3 ~~~~KI~IIG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~-~~d------~~~~~~ad   74 (146)
T d1ez4a1           3 PNHQKVVLVG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SGE------YSDCKDAD   74 (146)
T ss_dssp             TTBCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-ECC------GGGGTTCS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEe-ecc------HHHhcccc
Confidence            3456899999 79999998888887774  788888554321  1111       1222222 111      12335789


Q ss_pred             EEEEcCCCCc
Q psy9949         256 VILDAAGIPL  265 (383)
Q Consensus       256 ~v~d~~g~~~  265 (383)
                      +|+-++|.+.
T Consensus        75 ivvitag~~~   84 (146)
T d1ez4a1          75 LVVITAGAPQ   84 (146)
T ss_dssp             EEEECCCC--
T ss_pred             EEEEeccccc
Confidence            9998887654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.08  E-value=0.27  Score=36.98  Aligned_cols=72  Identities=26%  Similarity=0.295  Sum_probs=44.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchH--HHHHhc------CCCee-eeCCChHHHHHHhcCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAK--DLVTSL------NPNLV-IDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~--~~~~~l------g~~~v-~~~~~~~~~~~i~~~~g~d  255 (383)
                      ..+.+|.|.| +|.+|..++..+...+.  ++..++.++..  ..+.++      -...+ +...+      ..+..+.|
T Consensus         4 ~~~~KI~IiG-aG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d------~~~l~daD   76 (148)
T d1ldna1           4 NGGARVVVIG-AGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD------YDDCRDAD   76 (148)
T ss_dssp             TTSCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC------GGGTTTCS
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC------HHHhccce
Confidence            5677899999 69999999888887775  77777755432  122221      11111 11111      12345789


Q ss_pred             EEEEcCCCCc
Q psy9949         256 VILDAAGIPL  265 (383)
Q Consensus       256 ~v~d~~g~~~  265 (383)
                      +|+-++|.+.
T Consensus        77 vvvitag~~~   86 (148)
T d1ldna1          77 LVVICAGANQ   86 (148)
T ss_dssp             EEEECCSCCC
T ss_pred             eEEEeccccc
Confidence            9998888754

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=88.08  E-value=2.5  Score=32.29  Aligned_cols=137  Identities=13%  Similarity=0.137  Sum_probs=75.0

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHC-C-CEEEEEecCc--hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTM-AVQLLKAW-D-IEVVTTCSGD--AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~-ai~la~~~-G-~~Vi~~~~~~--~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|.|.| +|..|.- .+...+.. + .+++++++..  +. .++++++...++  .+  +. .+.+...+|+|+-|+...
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--~~--~~-ell~~~~id~v~I~tp~~   78 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--DS--YE-ELLESGLVDAVDLTLPVE   78 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--SC--HH-HHHHSSCCSEEEECCCGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--ee--ee-ccccccccceeecccccc
Confidence            688999 8999964 45666654 4 4888888543  22 455677766554  22  33 333446799999888765


Q ss_pred             cccccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEc---CCHHHHHHH
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFM---PIPYAVKEI  341 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  341 (383)
                      .-.... ..++.   .|.=|.+..|...+       ......-......        .+..+..++..   +..+.+.++
T Consensus        79 ~h~~~~-~~al~---~gk~V~~EKPl~~~-------~~e~~~l~~~~~~--------~~~~~~v~~~~R~~~~~~~~~~~  139 (181)
T d1zh8a1          79 LNLPFI-EKALR---KGVHVICEKPISTD-------VETGKKVVELSEK--------SEKTVYIAENFRENSYQKEFEDF  139 (181)
T ss_dssp             GHHHHH-HHHHH---TTCEEEEESSSSSS-------HHHHHHHHHHHHH--------CSSCEEEECGGGCCHHHHHHHHH
T ss_pred             cccccc-ccccc---cchhhhcCCCCcCC-------HHHHHHHHHHHHH--------hCCeEEEEeeccccccCHHHHHH
Confidence            433331 44444   45667776554222       1111111111111        11222112111   124678889


Q ss_pred             HHHHHcCCccc
Q psy9949         342 NKFIERGQIKP  352 (383)
Q Consensus       342 ~~l~~~g~l~~  352 (383)
                      .+++++|++..
T Consensus       140 ~~~i~~G~ig~  150 (181)
T d1zh8a1         140 YQVVAEGKPND  150 (181)
T ss_dssp             HHHHHSCCCCS
T ss_pred             HHHHHCCCCcc
Confidence            99999998754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=88.03  E-value=0.6  Score=40.52  Aligned_cols=73  Identities=16%  Similarity=0.221  Sum_probs=44.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCc---hHHHHHhcC-CCee----eeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIE-VVTTCSGD---AKDLVTSLN-PNLV----IDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~-Vi~~~~~~---~~~~~~~lg-~~~v----~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +|||+||+|-+|..++..+...|.+ |+++++..   +.+....+. ...+    .|-.+....+.+.+...+|+||.++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   81 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLA   81 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEECc
Confidence            6999999999999999888888885 45554221   122222221 1111    2444444334433334799999998


Q ss_pred             CC
Q psy9949         262 GI  263 (383)
Q Consensus       262 g~  263 (383)
                      +.
T Consensus        82 a~   83 (361)
T d1kewa_          82 AE   83 (361)
T ss_dssp             SC
T ss_pred             cc
Confidence            64

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.03  E-value=1.6  Score=29.34  Aligned_cols=66  Identities=11%  Similarity=0.162  Sum_probs=44.8

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHCCCEEEEEecCc--hHHHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTM-AVQLLKAWDIEVVTTCSGD--AKDLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~-ai~la~~~G~~Vi~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|-+.| -|++|.. ++++++..|+.|.+.+..+  ..+.++++|+.....++..+       ..+.|+|+-+.+-+
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~-------i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADN-------WYDPDLVIKTPAVR   71 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTS-------CCCCSEEEECTTCC
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecccc-------cCCCCEEEEecCcC
Confidence            567778 7888874 4788899999999999554  34678889986433322222       23578887655543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=87.93  E-value=0.19  Score=39.34  Aligned_cols=92  Identities=21%  Similarity=0.161  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchH----H-HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAK----D-LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~----~-~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      +.=+|.|.||+|-+|+-+++++..+-. ++..+.+.+..    . ....+..........  ..+  ....+.|++|-|.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~Dvvf~al   79 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVA--VKD--ADFSNVDAVFCCL   79 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBC--GGG--CCGGGCSEEEECC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchh--hhh--hhhcccceeeecc
Confidence            344799999999999999999997754 77666644321    1 111221111100000  000  0123699999999


Q ss_pred             CCCcccccccccccccCCCceEEEec
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLR  287 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~  287 (383)
                      ++..+...  ...+.  ..+..+...
T Consensus        80 p~~~s~~~--~~~l~--~~~~~v~~~  101 (183)
T d2cvoa1          80 PHGTTQEI--IKGLP--QELKIVDLS  101 (183)
T ss_dssp             SSSHHHHH--HHTSC--SSCEEEECS
T ss_pred             ccchHHHH--HHHHH--hcCcccccc
Confidence            98877555  45566  677777653

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.84  E-value=0.22  Score=42.66  Aligned_cols=90  Identities=19%  Similarity=0.125  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCchHH----HHHhcCC-C--eeeeCCChHHHHHHhcCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDAKD----LVTSLNP-N--LVIDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~~~----~~~~lg~-~--~v~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      .++++||-.| +| .|.+++.+|+ .|+ +|+++..++...    .++..+. +  .++..+..++.   .....+|+|+
T Consensus        32 ~~~~~VLDiG-cG-~G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~---~~~~~~D~iv  105 (316)
T d1oria_          32 FKDKVVLDVG-SG-TGILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE---LPVEKVDIII  105 (316)
T ss_dssp             HTTCEEEEET-CT-TSHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC---CSSSCEEEEE
T ss_pred             CCcCEEEEEe-cC-CcHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcc---cccceeEEEe
Confidence            6889999998 44 4777776666 577 899998554322    2233332 2  22332222111   1124689987


Q ss_pred             EcCCCCccc--------ccccccccccCCCceEE
Q psy9949         259 DAAGIPLDQ--------INSYLPFLKTGKFSKFV  284 (383)
Q Consensus       259 d~~g~~~~~--------~~~~~~~l~~~~~G~~v  284 (383)
                      ...-.....        ..+.-++|+  |+|+++
T Consensus       106 s~~~~~~l~~e~~~~~~l~~~~r~Lk--p~G~ii  137 (316)
T d1oria_         106 SEWMGYCLFYESMLNTVLHARDKWLA--PDGLIF  137 (316)
T ss_dssp             ECCCBBTBTBTCCHHHHHHHHHHHEE--EEEEEE
T ss_pred             eeeeeeeeccHHHHHHHHHHHHhcCC--CCeEEE
Confidence            643222111        111135788  999886

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.80  E-value=0.34  Score=39.17  Aligned_cols=39  Identities=13%  Similarity=-0.076  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV  228 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~  228 (383)
                      .++.+||..| + |.|..+..+|+ .|++|++++-+ ...+.+
T Consensus        44 ~~~~rvLd~G-C-G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a   83 (229)
T d2bzga1          44 KSGLRVFFPL-C-GKAVEMKWFAD-RGHSVVGVEISELGIQEF   83 (229)
T ss_dssp             CCSCEEEETT-C-TTCTHHHHHHH-TTCEEEEECSCHHHHHHH
T ss_pred             CCCCEEEEeC-C-CCcHHHHHHHh-CCCcEEEEeCCHHHHHHH
Confidence            7888999998 4 45888888887 59999999944 444444

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.74  E-value=0.36  Score=40.60  Aligned_cols=33  Identities=27%  Similarity=0.406  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      ++.+|+|.| .|.+|..+++.+...|++|+++.+
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            678999999 999999999999999999999874

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.52  E-value=0.27  Score=38.38  Aligned_cols=35  Identities=11%  Similarity=0.251  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~  223 (383)
                      .+++|+|.| +|..|+.++..++..|+ .|.++.+.+
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            357899999 89999999999999998 588877554

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=87.22  E-value=0.35  Score=38.33  Aligned_cols=34  Identities=26%  Similarity=0.493  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      .+++|.|.| .|.+|..++++++.+|++|++.++.
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~   77 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPY   77 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCc
Confidence            468999999 9999999999999999999999854

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=87.11  E-value=1.8  Score=31.99  Aligned_cols=78  Identities=13%  Similarity=0.135  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCCeeeeCCChHHH----HHHhcC-CCccEEEEcCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPNLVIDYNEPEAM----HSIAGA-GPYDVILDAAG  262 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~~v~~~~~~~~~----~~i~~~-~g~d~v~d~~g  262 (383)
                      -++|.|.||.|.+|...+..++..|.+|.+.++.... ......+++.++........    ..+... ..=.+++|+++
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            3689999988999999999999999999999965432 22233455555443332211    222222 22347788876


Q ss_pred             CCcc
Q psy9949         263 IPLD  266 (383)
Q Consensus       263 ~~~~  266 (383)
                      ....
T Consensus        89 vk~~   92 (152)
T d2pv7a2          89 VKRE   92 (152)
T ss_dssp             CCHH
T ss_pred             cCHH
Confidence            6543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=87.03  E-value=0.45  Score=38.87  Aligned_cols=34  Identities=24%  Similarity=0.336  Sum_probs=30.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      ...++|+|.| +|..|++++..++..|.+|+++.+
T Consensus         2 ~~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er   35 (265)
T d2voua1           2 PTTDRIAVVG-GSISGLTAALMLRDAGVDVDVYER   35 (265)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeC
Confidence            3567899999 899999999999989999999984

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.98  E-value=0.54  Score=39.51  Aligned_cols=111  Identities=14%  Similarity=0.109  Sum_probs=65.3

Q ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHH----Hh
Q psy9949         156 NISDEEAAGVLYTGLTAWSALQITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLV----TS  230 (383)
Q Consensus       156 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~----~~  230 (383)
                      +.++++|.--      -...+.+..++    ++|++||=.|  .|.|..++.+|+..|++|+++.-+ +..+.+    ++
T Consensus        40 ~~tL~eAQ~~------k~~~~~~~l~l----~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~  107 (285)
T d1kpga_          40 DMTLQEAQIA------KIDLALGKLGL----QPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVAN  107 (285)
T ss_dssp             TCCHHHHHHH------HHHHHHTTTTC----CTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHH------HHHHHHHHcCC----CCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHh
Confidence            4456665422      22334456777    9999999998  567889999999999999999954 433433    34


Q ss_pred             cCC-Cee-eeCCChHHHHHHhcCCCccEEEEc-----CCCCc--ccccccccccccCCCceEEE
Q psy9949         231 LNP-NLV-IDYNEPEAMHSIAGAGPYDVILDA-----AGIPL--DQINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       231 lg~-~~v-~~~~~~~~~~~i~~~~g~d~v~d~-----~g~~~--~~~~~~~~~l~~~~~G~~v~  285 (383)
                      .|. +.+ +...+  +. .+  .+.+|.|+..     +|...  .....+.++|+  |+|++++
T Consensus       108 ~g~~~~v~~~~~d--~~-~~--~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lk--pgG~~~l  164 (285)
T d1kpga_         108 SENLRSKRVLLAG--WE-QF--DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLP--ADGVMLL  164 (285)
T ss_dssp             CCCCSCEEEEESC--GG-GC--CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSC--TTCEEEE
T ss_pred             hhhhhhhHHHHhh--hh-cc--cccccceeeehhhhhcCchhHHHHHHHHHhhcC--CCCcEEE
Confidence            442 222 22111  11 00  1468877652     22221  11111246788  9999976

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=86.81  E-value=0.27  Score=39.57  Aligned_cols=97  Identities=14%  Similarity=0.108  Sum_probs=58.9

Q ss_pred             HhhhcCccCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHH----HhcCCCee--eeCCChHHHHHHhc
Q psy9949         178 ITAALGLVYPRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLV----TSLNPNLV--IDYNEPEAMHSIAG  250 (383)
Q Consensus       178 ~~~~~~~~~~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~----~~lg~~~v--~~~~~~~~~~~i~~  250 (383)
                      +.+++    +++++||=.| + |.|..+..+++. |++|++++-++ -.+.+    .+.+.+++  ...+..++.   ..
T Consensus         9 ~~~~l----~~~~rVLDiG-c-G~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~---~~   78 (231)
T d1vl5a_           9 QIAAL----KGNEEVLDVA-T-GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP---FT   78 (231)
T ss_dssp             HHHTC----CSCCEEEEET-C-TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC---SC
T ss_pred             HhcCC----CCcCEEEEec-c-cCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccccc---cc
Confidence            46777    9999999998 3 477777777754 78999999543 33333    34555433  222222110   11


Q ss_pred             CCCccEEEEcCCCC-----cccccccccccccCCCceEEEe
Q psy9949         251 AGPYDVILDAAGIP-----LDQINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       251 ~~g~d~v~d~~g~~-----~~~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .+.||+|+-.-.-.     ......+.++|+  |+|+++..
T Consensus        79 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lk--pgG~l~i~  117 (231)
T d1vl5a_          79 DERFHIVTCRIAAHHFPNPASFVSEAYRVLK--KGGQLLLV  117 (231)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             ccccccccccccccccCCHHHHHHHHHHhcC--CCcEEEEE
Confidence            24699998654422     122222367889  99999875

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.71  E-value=0.53  Score=38.06  Aligned_cols=95  Identities=17%  Similarity=0.083  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCch-HHHH----HhcCCCeeeeCCChHHHHHHh-cCCCccEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDA-KDLV----TSLNPNLVIDYNEPEAMHSIA-GAGPYDVIL  258 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~-~~~~----~~lg~~~v~~~~~~~~~~~i~-~~~g~d~v~  258 (383)
                      ++|++||=.|+  +.|..+..+++..|-  +|++++.+++ .+.+    +..+....+..+... .+... ....+|+++
T Consensus        72 ~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~-~~~~~~~~~~vD~i~  148 (227)
T d1g8aa_          72 KPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK-PEEYRALVPKVDVIF  148 (227)
T ss_dssp             CTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC-GGGGTTTCCCEEEEE
T ss_pred             CCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCC-cccccccccceEEEE
Confidence            99999999983  568899999998763  9999995543 3333    333322222222211 11111 124688888


Q ss_pred             EcCCCCcc---cccccccccccCCCceEEEe
Q psy9949         259 DAAGIPLD---QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       259 d~~g~~~~---~~~~~~~~l~~~~~G~~v~~  286 (383)
                      .....+..   ...++.+.|+  ++|+++++
T Consensus       149 ~d~~~~~~~~~~l~~~~~~Lk--pgG~lvi~  177 (227)
T d1g8aa_         149 EDVAQPTQAKILIDNAEVYLK--RGGYGMIA  177 (227)
T ss_dssp             ECCCSTTHHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             EEccccchHHHHHHHHHHhcc--cCCeEEEE
Confidence            76554422   1222256788  99998875

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.70  E-value=0.33  Score=39.36  Aligned_cols=95  Identities=16%  Similarity=0.080  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHHh----cCCC-eeeeCCChHHHHHHhcCCCccEE-EE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVTS----LNPN-LVIDYNEPEAMHSIAGAGPYDVI-LD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~~----lg~~-~v~~~~~~~~~~~i~~~~g~d~v-~d  259 (383)
                      .+|.+||-.|  .|.|..+..+++..+.+|+++.-+ ...+.+++    .+.. .++..+....... ...+.+|.+ ||
T Consensus        52 ~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fD~i~fD  128 (229)
T d1zx0a1          52 SKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT-LPDGHFDGILYD  128 (229)
T ss_dssp             TTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG-SCTTCEEEEEEC
T ss_pred             cCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccc-cccccccceeec
Confidence            6788999998  567888889998766789988844 44455543    2221 1122221111111 112468887 46


Q ss_pred             cCCCCccc---------ccccccccccCCCceEEEe
Q psy9949         260 AAGIPLDQ---------INSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       260 ~~g~~~~~---------~~~~~~~l~~~~~G~~v~~  286 (383)
                      ........         ...+.++|+  |+|+++..
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~r~Lk--pGG~~~~~  162 (229)
T d1zx0a1         129 TYPLSEETWHTHQFNFIKNHAFRLLK--PGGVLTYC  162 (229)
T ss_dssp             CCCCBGGGTTTHHHHHHHHTHHHHEE--EEEEEEEC
T ss_pred             ccccccccccccCHHHHHHHHHHHcC--CCcEEEEE
Confidence            55443211         111256789  99999864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.49  E-value=0.62  Score=33.47  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ..++++|.| +|.+|.-+++++..+|.+|..+.+.+
T Consensus        22 ~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            457899999 89999999999999999999998654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=86.36  E-value=1  Score=32.25  Aligned_cols=36  Identities=17%  Similarity=0.267  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +++++++|.| +|.+|.-++..++.+|.+|..+.+.+
T Consensus        28 ~~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          28 RPQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hcCCeEEEEC-cchhHHHHHHHhhcccceEEEEeecc
Confidence            7789999999 89999999999999999999998654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.89  E-value=0.48  Score=40.63  Aligned_cols=34  Identities=26%  Similarity=0.308  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      ..+++||+||+|-+|..++..+...|.+|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4578999999999999999999999999999973

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.86  E-value=0.76  Score=32.80  Aligned_cols=36  Identities=19%  Similarity=0.172  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +..++++|.| +|.+|.=+++.++.+|.+|..+.+.+
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            3458899999 89999999999999999999998654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.64  E-value=0.67  Score=32.90  Aligned_cols=35  Identities=20%  Similarity=0.175  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      -.++|+|.| +|.+|.-+++.++.+|.+|..+.+.+
T Consensus        20 ~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            357899999 89999999999999999999998654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.60  E-value=1.9  Score=31.88  Aligned_cols=33  Identities=30%  Similarity=0.446  Sum_probs=27.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGD  223 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~  223 (383)
                      +|.|.||+|.+|..++.++...+.  ++..++.++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            588999889999999999998885  777777544

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=85.59  E-value=0.27  Score=36.72  Aligned_cols=30  Identities=43%  Similarity=0.472  Sum_probs=25.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--EEEEEe
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI--EVVTTC  220 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~  220 (383)
                      +|.|.|++|.+|..++..+...+.  ++...+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~D   33 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVD   33 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEe
Confidence            689999899999999999988876  566665

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=85.49  E-value=1  Score=33.75  Aligned_cols=91  Identities=19%  Similarity=0.164  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCchHH-HHHhcCCC-eeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         189 DKRVLVLGASGGVGTMAVQLLKAWDI---EVVTTCSGDAKD-LVTSLNPN-LVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       189 ~~~VlI~ga~g~vG~~ai~la~~~G~---~Vi~~~~~~~~~-~~~~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      |-+|.|.||+|-+|.-+++++..+..   ++...++++... ........ ...+..+.+       ....|++|-+.+.
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~-------~~~~d~~f~~~~~   73 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETA-------FEGVDIALFSAGS   73 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTT-------TTTCSEEEECSCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhh-------hhhhhhhhhccCc
Confidence            34799999999999999999988753   555554432211 11111110 111121111       2368999988887


Q ss_pred             CcccccccccccccCCCceEEEecCC
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      ....... .+...  .+.++++.++.
T Consensus        74 ~~s~~~~-~~~~~--~~~~VIDlSsd   96 (154)
T d2gz1a1          74 STSAKYA-PYAVK--AGVVVVDNTSY   96 (154)
T ss_dssp             HHHHHHH-HHHHH--TTCEEEECSST
T ss_pred             cchhhHH-hhhcc--ccceehhcChh
Confidence            6654442 44556  77888888653

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=85.47  E-value=0.88  Score=34.78  Aligned_cols=94  Identities=17%  Similarity=0.221  Sum_probs=55.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chH---HHHHhc----C---CC------ee-ee------CCChHHHH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAK---DLVTSL----N---PN------LV-ID------YNEPEAMH  246 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~---~~~~~l----g---~~------~v-~~------~~~~~~~~  246 (383)
                      +|.|.| -|-+|.++...+...+.+++++-+. ...   ..+-++    |   .+      .+ ++      ++..+ .+
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~-p~   79 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMK-PE   79 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSS-GG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCC-hH
Confidence            578999 9999999999888888888887643 222   222221    1   11      00 00      00001 01


Q ss_pred             HHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         247 SIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       247 ~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .+... .++|+|+||+|--.....+ ...+.  .+.+-|++..|
T Consensus        80 ~i~W~~~gvD~ViEcTG~f~~~~~~-~~hl~--~gakkViisaP  120 (169)
T d1dssg1          80 NIPWSKAGAEYIVESTGVFTTIEKA-SAHFK--GGAKKVIISAP  120 (169)
T ss_dssp             GCCHHHHTCCEEEECSSSCCSHHHH-GGGGT--TTCSEEEESSC
T ss_pred             HCCccccCCCEEEecCceEcCHHHH-HHHHh--cCCceEeecCC
Confidence            11111 2899999999986654442 56667  66666777654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.45  E-value=0.38  Score=36.06  Aligned_cols=33  Identities=27%  Similarity=0.465  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCS  221 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~  221 (383)
                      .|++|||.| +|.+|.--+..+...|++|++++.
T Consensus        12 ~gkrvLViG-gG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence            689999999 799999999999999999999873

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.20  E-value=0.6  Score=37.67  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +.+++|+|.| +|..|+.++..++..|.+|..+...+
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            4678999999 89999999999999999999998554

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=85.04  E-value=1.3  Score=33.58  Aligned_cols=95  Identities=17%  Similarity=0.198  Sum_probs=54.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCchH---HHHHhc----C---CC------ee-ee------CCChHHHH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGDAK---DLVTSL----N---PN------LV-ID------YNEPEAMH  246 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~~~---~~~~~l----g---~~------~v-~~------~~~~~~~~  246 (383)
                      +|.|.| .|-+|.++..++.... .+++++-+....   ..+-++    |   .+      .+ ++      ++..+ .+
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~-p~   80 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD-PA   80 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS-GG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC-hH
Confidence            578999 9999999999888664 588887744322   222221    1   11      00 00      00001 01


Q ss_pred             HHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCCC
Q psy9949         247 SIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       247 ~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      .+.. ..++|+|+||+|--.....+ ...+.  .+.+-|++..|.
T Consensus        81 ~i~W~~~gvDiViEcTG~f~t~~~~-~~hl~--~gakkViiSaP~  122 (166)
T d1gado1          81 NLKWDEVGVDVVAEATGLFLTDETA-RKHIT--AGAKKVVMTGPS  122 (166)
T ss_dssp             GGCHHHHTCSEEEECSSSCCSHHHH-THHHH--TTCSEEEESSCC
T ss_pred             HCCccccCCCEEEEccccccCHHHH-HHHhc--CCCceEEeeccc
Confidence            1111 13899999999976654442 55677  666667776553

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=84.95  E-value=0.73  Score=37.21  Aligned_cols=35  Identities=31%  Similarity=0.388  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      +..++|+|.| +|..|++++..+...|.+|.++.+.
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            4566899999 8999999999999999999988854

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=84.75  E-value=2.3  Score=31.45  Aligned_cols=76  Identities=14%  Similarity=0.118  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCch--HHHHH---hcCCCeeeeCCChHHHHHHhc--CCCccEEEEc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDA--KDLVT---SLNPNLVIDYNEPEAMHSIAG--AGPYDVILDA  260 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~--~~~~~---~lg~~~v~~~~~~~~~~~i~~--~~g~d~v~d~  260 (383)
                      +.++++|.| .|.+|..+++.+...|.+|+++..+++  .+.+.   ..|.. ++..+..+ .+.+.+  ...+|.++-+
T Consensus         2 ~knHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d-~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           2 RKDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND-SSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS-HHHHHHHTTTTCSEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcc-hHHHHHhccccCCEEEEc
Confidence            346799999 799999999999999999988885542  22332   33443 33222211 223332  2468999988


Q ss_pred             CCCCcc
Q psy9949         261 AGIPLD  266 (383)
Q Consensus       261 ~g~~~~  266 (383)
                      ++....
T Consensus        79 ~~~d~~   84 (153)
T d1id1a_          79 SDNDAD   84 (153)
T ss_dssp             SSCHHH
T ss_pred             cccHHH
Confidence            877543

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=84.58  E-value=0.37  Score=36.05  Aligned_cols=89  Identities=16%  Similarity=0.098  Sum_probs=48.8

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHC--CC-EEEEEecCchHH--HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQL-LKAW--DI-EVVTTCSGDAKD--LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~l-a~~~--G~-~Vi~~~~~~~~~--~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|.|.||+|.+|+-.+++ +...  -. +++...++....  .........+.+..+..      ...++|++|-|+++.
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~------~~~~~DivF~a~~~~   76 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE------ALKALDIIVTCQGGD   76 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH------HHHTCSEEEECSCHH
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchh------hhhcCcEEEEecCch
Confidence            689999999999999975 4433  22 666666543221  11111111222222211      113699999999987


Q ss_pred             cccccccccccccCCC--ceEEEecC
Q psy9949         265 LDQINSYLPFLKTGKF--SKFVTLRS  288 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~--G~~v~~~~  288 (383)
                      .+...+ .....  .+  ..+++.++
T Consensus        77 ~s~~~~-~~~~~--~g~~~~VID~Ss   99 (146)
T d1t4ba1          77 YTNEIY-PKLRE--SGWQGYWIDAAS   99 (146)
T ss_dssp             HHHHHH-HHHHH--TTCCCEEEECSS
T ss_pred             HHHHhh-HHHHh--cCCCeecccCCc
Confidence            764441 33333  33  34666543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.40  E-value=1.3  Score=35.16  Aligned_cols=96  Identities=21%  Similarity=0.180  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC-chHH----HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSG-DAKD----LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      +||++||=.|+  |.|..+..+++..+. +|++++-+ +..+    .+++.+....+..+..+....-.....+|+++..
T Consensus        55 kpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~  132 (209)
T d1nt2a_          55 RGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD  132 (209)
T ss_dssp             CSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred             CCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEec
Confidence            99999999994  456688888887764 99999954 3333    3344443222222211111100011357888765


Q ss_pred             CCCCcc---cccccccccccCCCceEEEe
Q psy9949         261 AGIPLD---QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       261 ~g~~~~---~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ......   ....+.+.++  ++|+++..
T Consensus       133 ~~~~~~~~~~l~~~~~~Lk--pgG~l~i~  159 (209)
T d1nt2a_         133 IAQKNQIEILKANAEFFLK--EKGEVVIM  159 (209)
T ss_dssp             CCSTTHHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             ccChhhHHHHHHHHHHHhc--cCCeEEEE
Confidence            544331   1111257888  99999775

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=84.35  E-value=0.57  Score=39.50  Aligned_cols=36  Identities=22%  Similarity=0.323  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ...++|+|.| +|..|+.++..+...|.+|.++...+
T Consensus        28 ~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4557899999 89999999888888899999998544

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.26  E-value=9.3  Score=32.01  Aligned_cols=90  Identities=12%  Similarity=0.172  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEecCc-hH-HHH---HhcCCCeeeeCCChHHHHHHhcCCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLK-AWDI-EVVTTCSGD-AK-DLV---TSLNPNLVIDYNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~-~~G~-~Vi~~~~~~-~~-~~~---~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      +..+++.|+| +|..+..-+..+. .+.. +|.+..++. +. .++   +..+.....+.     .+.+   .+.|+|+-
T Consensus       123 ~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-----~~a~---~~aDiV~t  193 (320)
T d1omoa_         123 KNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-----AEEA---SRCDVLVT  193 (320)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-----HHHH---TSSSEEEE
T ss_pred             CCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-----hhhh---ccccEEEE
Confidence            4557899999 8999987776665 4666 777777553 22 233   34444332211     1222   46899999


Q ss_pred             cCCCCcccccccccccccCCCceEEEecCC
Q psy9949         260 AAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       260 ~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      |+.+..-...  .+.++  ++-++..+|++
T Consensus       194 aT~s~~P~~~--~~~l~--~G~hv~~iGs~  219 (320)
T d1omoa_         194 TTPSRKPVVK--AEWVE--EGTHINAIGAD  219 (320)
T ss_dssp             CCCCSSCCBC--GGGCC--TTCEEEECSCC
T ss_pred             eccCcccccc--hhhcC--CCCeEeecCCc
Confidence            8887655444  56778  88888888754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.22  E-value=0.92  Score=32.64  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ..++++|.| +|.+|+-++..++.+|.+|..+.+.+
T Consensus        21 ~pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          21 LPGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            347899999 89999999999999999999998764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=83.93  E-value=2  Score=31.81  Aligned_cols=62  Identities=19%  Similarity=0.231  Sum_probs=39.5

Q ss_pred             EEEEEcCCchHHHHHHH-HHHHCCCEEEEEecCc-hHH-HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCC
Q psy9949         191 RVLVLGASGGVGTMAVQ-LLKAWDIEVVTTCSGD-AKD-LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAG  262 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~-la~~~G~~Vi~~~~~~-~~~-~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g  262 (383)
                      +|.+.| +|.+|.+.++ +++.-+.++++.+++. +.+ +.+++|.. +.+..+        +....|+||=|+-
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~--------~v~~~Div~lavk   66 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP--------ELHSDDVLILAVK   66 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC--------CCCTTSEEEECSC
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc--------cccccceEEEecC
Confidence            578888 8999998777 5555446999888664 444 44566653 222111        1235788887775

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.53  E-value=0.79  Score=35.87  Aligned_cols=33  Identities=30%  Similarity=0.301  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ++|.|.| +|.+|...++++...|.+|+..+.++
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~~G~~V~l~D~~~   37 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQTE   37 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             EEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCh
Confidence            5899999 79999999999999999999999654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.52  E-value=0.8  Score=32.88  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG  222 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~  222 (383)
                      ..++++|.| +|.+|.-++++++.+|.+|..+.++
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            456899999 8999999999999999999988754

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=83.46  E-value=1.7  Score=33.11  Aligned_cols=94  Identities=19%  Similarity=0.211  Sum_probs=52.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCchHH---HHHhc----C---CC-------------eeeeCCChHHHH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDAKD---LVTSL----N---PN-------------LVIDYNEPEAMH  246 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~~~---~~~~l----g---~~-------------~v~~~~~~~~~~  246 (383)
                      +|.|.| .|-+|.++..++... ..+++++-+....+   .+-++    |   ..             .+.-++..+. +
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p-~   80 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP-E   80 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG-G
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCH-H
Confidence            588999 999999998877654 45777776433222   22211    1   10             1100111111 1


Q ss_pred             HHhc-CCCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         247 SIAG-AGPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       247 ~i~~-~~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .+.. ..++|+|+||+|--.....+ ...+.  .+.+-|.+..|
T Consensus        81 ~i~W~~~~vDiViEcTG~f~t~~~~-~~hl~--~gakkViiSap  121 (171)
T d3cmco1          81 NLAWGEIGVDIVVESTGRFTKREDA-AKHLE--AGAKKVIISAP  121 (171)
T ss_dssp             GCCTGGGTCCEEEECSSSCCBHHHH-THHHH--TTCSEEEESSC
T ss_pred             HccccccCCcEEEEecCccCCHHHH-HHHHh--CCCceEEEecc
Confidence            1111 13799999999986654442 55666  66655666544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.46  E-value=1.2  Score=34.24  Aligned_cols=35  Identities=17%  Similarity=0.323  Sum_probs=27.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      -++++|+|.| +|+++.+++..+...| +|+.+.|+.
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~   50 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTV   50 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhh
Confidence            3788999999 8999998877765545 888777763

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=83.33  E-value=4  Score=30.54  Aligned_cols=135  Identities=16%  Similarity=0.226  Sum_probs=70.7

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHC-CCEEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcc
Q psy9949         191 RVLVLGASGGVGTM-AVQLLKAW-DIEVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLD  266 (383)
Q Consensus       191 ~VlI~ga~g~vG~~-ai~la~~~-G~~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~  266 (383)
                      +|.|.| +|..|.- .+...+.. +.++++.+++. +. .++++++...++.  +  +.+-+ + ..+|+|+-|+....-
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~--~~~ll-~-~~iD~V~I~tp~~~H   75 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT--D--YRDVL-Q-YGVDAVMIHAATDVH   75 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS--S--TTGGG-G-GCCSEEEECSCGGGH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc--c--HHHhc-c-cccceeccccccccc
Confidence            578999 8999854 45566555 44665443432 33 4556777654432  1  12212 2 268999988876554


Q ss_pred             cccccccccccCCCceEEEecCCCccCCCCCCCchhhhhhHHHHhhhhhccccccCCccEEEEEEcCCHHHHHHHHHHHH
Q psy9949         267 QINSYLPFLKTGKFSKFVTLRSPFLKNTDSLGLVPGLVKNAFDLLKSNFESGELCKTNTIRWGFFMPIPYAVKEINKFIE  346 (383)
Q Consensus       267 ~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (383)
                      .... ..++.  . |.-|.+..|...+       ......-....        .-.+..+..++ +.....+.++.+.++
T Consensus        76 ~~~~-~~al~--~-gk~V~~EKP~~~~-------~~e~~~l~~~a--------~~~~~~~~vg~-~r~~~~~~~~~~~~~  135 (167)
T d1xeaa1          76 STLA-AFFLH--L-GIPTFVDKPLAAS-------AQECENLYELA--------EKHHQPLYVGF-NGFDAMVQDWLQVAA  135 (167)
T ss_dssp             HHHH-HHHHH--T-TCCEEEESCSCSS-------HHHHHHHHHHH--------HHTTCCEEEEC-GTHHHHHHHHHHHHH
T ss_pred             cccc-ccccc--c-ccccccCCCCcCC-------HHHHHHHHHHH--------HHcCCEEEEEe-CcCCHHHHHHHHHhh
Confidence            3332 55665  4 4445665443222       11111111111        11122222232 344567788888888


Q ss_pred             cCCccc
Q psy9949         347 RGQIKP  352 (383)
Q Consensus       347 ~g~l~~  352 (383)
                      .|++..
T Consensus       136 ~G~ig~  141 (167)
T d1xeaa1         136 AGKLPT  141 (167)
T ss_dssp             HTCCCH
T ss_pred             cCCCCc
Confidence            898754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.33  E-value=1.5  Score=31.87  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +++++|+|.| +|.+|.-++..++.+|.+|..+.+.+
T Consensus        33 ~~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          33 IADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            6778999999 89999999999999999999998654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.27  E-value=0.8  Score=38.59  Aligned_cols=36  Identities=25%  Similarity=0.482  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      ++..+|+|.| +|-.|+.|+..+...|.+|.+.-..+
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5667899999 89999999999999999998887443

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=83.18  E-value=1.7  Score=34.61  Aligned_cols=92  Identities=16%  Similarity=0.166  Sum_probs=56.1

Q ss_pred             EEEEEcCCchHHH-HHHHHHHHC-CCEEEEEecCc--h-HHHHHhcCCC--eeeeCCChHHHHHHhcCCCccEEEEcCCC
Q psy9949         191 RVLVLGASGGVGT-MAVQLLKAW-DIEVVTTCSGD--A-KDLVTSLNPN--LVIDYNEPEAMHSIAGAGPYDVILDAAGI  263 (383)
Q Consensus       191 ~VlI~ga~g~vG~-~ai~la~~~-G~~Vi~~~~~~--~-~~~~~~lg~~--~v~~~~~~~~~~~i~~~~g~d~v~d~~g~  263 (383)
                      +|.|.| +|.+|. ..+...+.. +.+++++++..  + .+++++++..  .+..+++  +. ++.+...+|+|+-++..
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--~~-ell~~~~iD~V~I~tp~  110 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--FD-KIAKDPKIDAVYIILPN  110 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--GG-GGGGCTTCCEEEECSCG
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc--hh-hhcccccceeeeeccch
Confidence            789999 898986 344444444 67999988543  3 3456777754  2333443  22 33344579999988877


Q ss_pred             CcccccccccccccCCCceEEEecCCC
Q psy9949         264 PLDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       264 ~~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      ..-...+ .+++.   .|.=|.+..|.
T Consensus       111 ~~H~~~~-~~al~---~gk~v~~EKPl  133 (221)
T d1h6da1         111 SLHAEFA-IRAFK---AGKHVMCEKPM  133 (221)
T ss_dssp             GGHHHHH-HHHHH---TTCEEEECSSC
T ss_pred             hhhhhHH-HHhhh---cchhhhcCCCc
Confidence            6543332 55665   45666776554

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.08  E-value=0.76  Score=33.02  Aligned_cols=36  Identities=19%  Similarity=0.216  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +..++++|.| +|-+|+=+++.++.+|.+|..+.+.+
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            4568999999 89999999999999999999988654

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=83.01  E-value=2.6  Score=31.96  Aligned_cols=94  Identities=15%  Similarity=0.183  Sum_probs=53.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecC-chH---HHHHhc----C---CC------ee-ee------CCChHHH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSG-DAK---DLVTSL----N---PN------LV-ID------YNEPEAM  245 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~-~~~---~~~~~l----g---~~------~v-~~------~~~~~~~  245 (383)
                      +|.|.| -|-+|.++..++... ..+++++-.. ...   ..+-++    |   .+      .+ ++      ++..+ .
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~-p   80 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD-P   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS-G
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC-h
Confidence            689999 999999999877755 4688888643 222   222221    1   11      11 00      01111 1


Q ss_pred             HHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCC
Q psy9949         246 HSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       246 ~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      +.+... .++|+|+||+|--.....+ ...+.  .+.+-|++..|
T Consensus        81 ~~i~W~~~~vDiViEcTG~f~~~~~~-~~hl~--~gakkViiSaP  122 (169)
T d1u8fo1          81 SKIKWGDAGAEYVVESTGVFTTMEKA-GAHLQ--GGAKRVIISAP  122 (169)
T ss_dssp             GGCCTTTTTCCEEEECSSSCCSHHHH-GGGGG--GTCSEEEESSC
T ss_pred             hhCCccccCCCEEEEecceeccHHHH-HHHHh--cCCceEeeccc
Confidence            122222 3899999999986554442 45566  56666666554

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=82.98  E-value=0.12  Score=39.64  Aligned_cols=90  Identities=18%  Similarity=0.172  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCch-HHHHHhcC----C--CeeeeCCChHHHHHHhcCCCccEEEEcC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAW-DIEVVTTCSGDA-KDLVTSLN----P--NLVIDYNEPEAMHSIAGAGPYDVILDAA  261 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~-G~~Vi~~~~~~~-~~~~~~lg----~--~~v~~~~~~~~~~~i~~~~g~d~v~d~~  261 (383)
                      =+|.|.|++|-+|.++++++... ++++++....+. ...-..+|    .  ..+...++  ...   -...+|+++|.+
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~--~~~---~~~~~DViIDFs   79 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSS--LDA---VKDDFDVFIDFT   79 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESC--STT---TTTSCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeecc--HHH---HhcccceEEEec
Confidence            36999999999999999999865 667777663322 11111111    1  00100111  000   013688999887


Q ss_pred             CCCcccccccccccccCCCceEEEecC
Q psy9949         262 GIPLDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       262 g~~~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .-......  ++...  ..|.=+.+|.
T Consensus        80 ~p~~~~~~--~~~a~--~~~~~~ViGT  102 (162)
T d1diha1          80 RPEGTLNH--LAFCR--QHGKGMVIGT  102 (162)
T ss_dssp             CHHHHHHH--HHHHH--HTTCEEEECC
T ss_pred             cHHHHHHH--HHHHH--hccceeEEec
Confidence            65554444  55544  5565555554

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.69  E-value=2.3  Score=31.48  Aligned_cols=83  Identities=14%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hH-HHHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCCcccc
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AK-DLVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIPLDQI  268 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~-~~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~~~~~  268 (383)
                      +|.+.| +|.+|.+.+.-....|.++++..++. +. ++.+++|...+-     +..+.+   ...|+||-|+--.....
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~~~~~~---~~~dvIilavkp~~~~~   72 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM-----SHQDLI---DQVDLVILGIKPQLFET   72 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS-----SHHHHH---HTCSEEEECSCGGGHHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec-----hhhhhh---hccceeeeecchHhHHH
Confidence            478888 99999988776666688998888653 33 455677765331     112222   25899998886444333


Q ss_pred             cccccccccCCCceEEEe
Q psy9949         269 NSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       269 ~~~~~~l~~~~~G~~v~~  286 (383)
                      .  ++.+.  ++..++.+
T Consensus        73 v--l~~l~--~~~~iis~   86 (152)
T d2ahra2          73 V--LKPLH--FKQPIISM   86 (152)
T ss_dssp             H--HTTSC--CCSCEEEC
T ss_pred             H--hhhcc--cceeEecc
Confidence            3  56666  77777765

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.44  E-value=1  Score=31.77  Aligned_cols=35  Identities=14%  Similarity=0.204  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         188 RDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       188 ~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      -+++++|.| +|.+|.-+++.++.+|.+|..+.+.+
T Consensus        20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            347899999 89999999999999999999887654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.04  E-value=0.61  Score=39.13  Aligned_cols=94  Identities=12%  Similarity=0.130  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHHh----cCCC------eeeeCCChHHHHHHhcCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVTS----LNPN------LVIDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~~----lg~~------~v~~~~~~~~~~~i~~~~g~d  255 (383)
                      +++.+||=.|  .|.|..++.||+. |++|++++-++ -.+.+++    .+..      .+.+.+-......+.....+|
T Consensus        55 ~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd  131 (292)
T d1xvaa_          55 HGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFD  131 (292)
T ss_dssp             TTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred             cCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCce
Confidence            5678898887  5678888888875 89999999554 3444432    2211      111222111222222235799


Q ss_pred             EEEEcCCCC-cc------------cccccccccccCCCceEEE
Q psy9949         256 VILDAAGIP-LD------------QINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       256 ~v~d~~g~~-~~------------~~~~~~~~l~~~~~G~~v~  285 (383)
                      .|+.....- ..            ....+.++|+  |+|.++.
T Consensus       132 ~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk--pgG~li~  172 (292)
T d1xvaa_         132 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVR--PGGLLVI  172 (292)
T ss_dssp             EEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEE--EEEEEEE
T ss_pred             EEEEecCchhhcCCcccChHHHHHHHHHHHHHcC--cCcEEEE
Confidence            988543221 00            1122267789  9999876

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.88  E-value=1.1  Score=32.25  Aligned_cols=36  Identities=14%  Similarity=0.167  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD  223 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~  223 (383)
                      +..++++|.| +|.+|+=+++..+.+|.+|..+.+.+
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            4568999999 89999999999999999999998543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.76  E-value=0.35  Score=36.10  Aligned_cols=90  Identities=19%  Similarity=0.159  Sum_probs=52.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEecCchHH-HHHhcCCCee-eeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         190 KRVLVLGASGGVGTMAVQLLKAWD---IEVVTTCSGDAKD-LVTSLNPNLV-IDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~la~~~G---~~Vi~~~~~~~~~-~~~~lg~~~v-~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      -+|.|.||+|-+|+-+++++..++   .++..+.+++... .....+.+.. .+....       ...+.|++|-|.++.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~-------~~~~~d~vf~a~p~~   75 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSF-------DFSSVGLAFFAAAAE   75 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGC-------CGGGCSEEEECSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhh-------hhccceEEEecCCcc
Confidence            369999999999999999996443   3777666543221 1111111111 111100       123689999999877


Q ss_pred             cccccccccccccCCCceEEEecCC
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRSP  289 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~~  289 (383)
                      .+.... -....  .+.++++.++.
T Consensus        76 ~s~~~~-~~~~~--~g~~VID~Ss~   97 (144)
T d2hjsa1          76 VSRAHA-ERARA--AGCSVIDLSGA   97 (144)
T ss_dssp             HHHHHH-HHHHH--TTCEEEETTCT
T ss_pred             hhhhhc-ccccc--CCceEEeechh
Confidence            654442 34455  66777777543

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=81.48  E-value=1.9  Score=32.98  Aligned_cols=95  Identities=19%  Similarity=0.155  Sum_probs=52.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC----CCEEEEEecCchH---HHHHh-------cCCC-------------eeeeCCChH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW----DIEVVTTCSGDAK---DLVTS-------LNPN-------------LVIDYNEPE  243 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~----G~~Vi~~~~~~~~---~~~~~-------lg~~-------------~v~~~~~~~  243 (383)
                      +|.|.| -|-+|.++...+...    ..+|+++-+....   ..+-+       +...             .+.-++..+
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            588999 999999998877543    2366666643222   22221       1111             010011111


Q ss_pred             HHHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCC
Q psy9949         244 AMHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       244 ~~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                       .+.+... .++|+|+||+|--.....+ ...+.  .+.+-|++..|.
T Consensus        82 -p~~i~W~~~gvDiViEcTG~f~~~~~a-~~hl~--~GakkViiSAP~  125 (173)
T d1obfo1          82 -PAQLPWGALKVDVVLECTGFFTTKEKA-GAHIK--GGAKKVIISAPG  125 (173)
T ss_dssp             -GGGSCTTTTTCSEEEECSSSCCSHHHH-HHHHH--HTCSEEEESSCC
T ss_pred             -HHHCcccccccceEEEecccccCHHHH-HHHhc--cCCcceEEecCC
Confidence             1122222 4899999999975544332 56666  666667775543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=81.28  E-value=1.1  Score=37.99  Aligned_cols=74  Identities=22%  Similarity=0.183  Sum_probs=42.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC------EEEEEecC---chHHHHHhcCCC---eeeeCCChHHHHHHhcCCCccEEE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI------EVVTTCSG---DAKDLVTSLNPN---LVIDYNEPEAMHSIAGAGPYDVIL  258 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~------~Vi~~~~~---~~~~~~~~lg~~---~v~~~~~~~~~~~i~~~~g~d~v~  258 (383)
                      +|||+||+|-+|..++..+...|.      +++..+..   .+..........   ..+..+..+..........+|.|+
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi   81 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIV   81 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceEE
Confidence            599999999999999988877654      45655521   122222222211   223333322222222345789999


Q ss_pred             EcCCCC
Q psy9949         259 DAAGIP  264 (383)
Q Consensus       259 d~~g~~  264 (383)
                      .+++..
T Consensus        82 ~~a~~~   87 (322)
T d1r6da_          82 HFAAES   87 (322)
T ss_dssp             ECCSCC
T ss_pred             eecccc
Confidence            887654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=81.24  E-value=0.69  Score=35.10  Aligned_cols=72  Identities=14%  Similarity=0.220  Sum_probs=45.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCchH--HHHHhc-------CCCeeeeCCChHHHHHHhcCCCcc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI--EVVTTCSGDAK--DLVTSL-------NPNLVIDYNEPEAMHSIAGAGPYD  255 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~--~Vi~~~~~~~~--~~~~~l-------g~~~v~~~~~~~~~~~i~~~~g~d  255 (383)
                      .+..+|.|.| +|.+|..++..+...|.  +++.++.+++.  ..+.++       +...+....+      ..+..+.|
T Consensus        18 ~~~~KV~IIG-aG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d------~~~~~~ad   90 (160)
T d1i0za1          18 VPNNKITVVG-VGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD------YSVTANSK   90 (160)
T ss_dssp             CCSSEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS------GGGGTTCS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc------hhhccccc
Confidence            3567999999 79999999999998886  67777754332  122221       1122222211      12235789


Q ss_pred             EEEEcCCCCc
Q psy9949         256 VILDAAGIPL  265 (383)
Q Consensus       256 ~v~d~~g~~~  265 (383)
                      +|+-++|.+.
T Consensus        91 iVVitAg~~~  100 (160)
T d1i0za1          91 IVVVTAGVRQ  100 (160)
T ss_dssp             EEEECCSCCC
T ss_pred             EEEEecCCcc
Confidence            9998888653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=81.21  E-value=0.87  Score=35.09  Aligned_cols=40  Identities=23%  Similarity=0.013  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-chHHHHH
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSG-DAKDLVT  229 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~-~~~~~~~  229 (383)
                      +++.+||..|  .|.|..++.+|+. |++|++++-+ +..+.++
T Consensus        19 ~~~~rvLd~G--CG~G~~a~~la~~-G~~V~gvD~S~~~i~~a~   59 (201)
T d1pjza_          19 VPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYF   59 (201)
T ss_dssp             CTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHH
T ss_pred             CCCCEEEEec--CcCCHHHHHHHHc-CCceEeecccHHHHHHHH
Confidence            8999999998  4578889999874 9999999944 4455554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=81.18  E-value=2.8  Score=31.18  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=44.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCc-hH-HHHHh-------cCCCeeeeCCChHHHHHHhcCCCccE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGD-AK-DLVTS-------LNPNLVIDYNEPEAMHSIAGAGPYDV  256 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~-~~-~~~~~-------lg~~~v~~~~~~~~~~~i~~~~g~d~  256 (383)
                      ++..+|.|.| +|.+|..++.++...+. +++..+.++ +. ..+.+       .+....+... .+..+.   ..+.|+
T Consensus         5 ~k~~KI~IIG-aG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~~~~~---~~~adi   79 (154)
T d1pzga1           5 QRRKKVAMIG-SGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSYEAA---LTGADC   79 (154)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSHHHH---HTTCSE
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-Cchhhh---hcCCCe
Confidence            6778999999 69999988888887776 888777443 22 11221       2222222111 112222   247899


Q ss_pred             EEEcCCCCc
Q psy9949         257 ILDAAGIPL  265 (383)
Q Consensus       257 v~d~~g~~~  265 (383)
                      |+-++|.+.
T Consensus        80 Vvitag~~~   88 (154)
T d1pzga1          80 VIVTAGLTK   88 (154)
T ss_dssp             EEECCSCSS
T ss_pred             EEEeccccc
Confidence            998887653

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.04  E-value=2.1  Score=32.55  Aligned_cols=95  Identities=21%  Similarity=0.318  Sum_probs=52.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC---CCEEEEEecCchH---HHHHhc----C---C------Cee-ee------CCChHH
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAW---DIEVVTTCSGDAK---DLVTSL----N---P------NLV-ID------YNEPEA  244 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~---G~~Vi~~~~~~~~---~~~~~l----g---~------~~v-~~------~~~~~~  244 (383)
                      +|.|.| .|-+|.++.+.+...   +.+|+++-+....   .++-++    |   .      +.+ ++      ++..+ 
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~-   79 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD-   79 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS-
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC-
Confidence            688999 999999998877643   3688887643222   222221    1   1      111 00      00000 


Q ss_pred             HHHHhcC-CCccEEEEcCCCCcccccccccccccCCCceEEEecCCC
Q psy9949         245 MHSIAGA-GPYDVILDAAGIPLDQINSYLPFLKTGKFSKFVTLRSPF  290 (383)
Q Consensus       245 ~~~i~~~-~g~d~v~d~~g~~~~~~~~~~~~l~~~~~G~~v~~~~~~  290 (383)
                      .+.+... .++|+|+||+|--.....+ ...+.  .+.+-|.+..|.
T Consensus        80 p~~i~W~~~gvD~ViEcTG~f~t~~~~-~~hl~--~GakkViiSAP~  123 (169)
T d1hdgo1          80 PSKLPWKDLGVDFVIESTGVFRNREKA-ELHLQ--AGAKKVIITAPA  123 (169)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHH-THHHH--TTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccccch-hhhcc--CCCceEEEeccc
Confidence            0111111 2799999999986554442 55677  666666665543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.74  E-value=1.7  Score=35.03  Aligned_cols=95  Identities=22%  Similarity=0.140  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCc-hHHHHH----hcCCCeeeeCCChHHHHHHhc-CCCccEEEE
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWD-IEVVTTCSGD-AKDLVT----SLNPNLVIDYNEPEAMHSIAG-AGPYDVILD  259 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G-~~Vi~~~~~~-~~~~~~----~lg~~~v~~~~~~~~~~~i~~-~~g~d~v~d  259 (383)
                      ++|++||=.|+  +.|..+..+++... .+|++++-++ ..+.++    +.+....+..+..... ...+ ...+|+++.
T Consensus        73 kpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~-~~~~~~~~v~~i~~  149 (230)
T d1g8sa_          73 KRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ-EYANIVEKVDVIYE  149 (230)
T ss_dssp             CTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG-GGTTTCCCEEEEEE
T ss_pred             CCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc-ccccccceeEEeec
Confidence            99999999994  45788888898753 4999999544 334333    2332222222221111 1111 124666766


Q ss_pred             cCCCCcc---cccccccccccCCCceEEEe
Q psy9949         260 AAGIPLD---QINSYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       260 ~~g~~~~---~~~~~~~~l~~~~~G~~v~~  286 (383)
                      ......-   ...++.+.|+  ++|.+++.
T Consensus       150 ~~~~~~~~~~~l~~~~r~LK--pgG~~~i~  177 (230)
T d1g8sa_         150 DVAQPNQAEILIKNAKWFLK--KGGYGMIA  177 (230)
T ss_dssp             CCCSTTHHHHHHHHHHHHEE--EEEEEEEE
T ss_pred             cccchHHHHHHHHHHHHhcc--cCceEEEE
Confidence            5554321   1222256788  99998775

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=80.70  E-value=1.5  Score=37.95  Aligned_cols=31  Identities=39%  Similarity=0.495  Sum_probs=25.6

Q ss_pred             CEEEEEcCCchHHHHHHH-HHHHCCCEEEEEe
Q psy9949         190 KRVLVLGASGGVGTMAVQ-LLKAWDIEVVTTC  220 (383)
Q Consensus       190 ~~VlI~ga~g~vG~~ai~-la~~~G~~Vi~~~  220 (383)
                      -+|||+||+|=+|..++. |++..|.+|++++
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            479999999999976665 5567899999986

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.55  E-value=1.8  Score=33.25  Aligned_cols=74  Identities=15%  Similarity=0.116  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchHHHHHhcCCCee-------ee----CCChHHHHHHhcCCCccEEEE
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAKDLVTSLNPNLV-------ID----YNEPEAMHSIAGAGPYDVILD  259 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~~~~~~lg~~~v-------~~----~~~~~~~~~i~~~~g~d~v~d  259 (383)
                      +|.|.| +|..|.+.+..+...|.+|+...+..+.+..+++...+.       +.    ....++.+.+   .+.|+|+.
T Consensus         2 kI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~ad~Ii~   77 (180)
T d1txga2           2 IVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL---ENAEVVLL   77 (180)
T ss_dssp             EEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH---TTCSEEEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH---hccchhhc
Confidence            588999 899999988888877889988887544333332211100       00    0012222222   46899999


Q ss_pred             cCCCCcccc
Q psy9949         260 AAGIPLDQI  268 (383)
Q Consensus       260 ~~g~~~~~~  268 (383)
                      ++.......
T Consensus        78 avps~~~~~   86 (180)
T d1txga2          78 GVSTDGVLP   86 (180)
T ss_dssp             CSCGGGHHH
T ss_pred             ccchhhhHH
Confidence            998766533

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.44  E-value=1.9  Score=34.64  Aligned_cols=90  Identities=21%  Similarity=0.165  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCc-hHHHHH----hcCCC-eeeeCCChHHHHHHhcCCCccEEEEc
Q psy9949         187 PRDKRVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGD-AKDLVT----SLNPN-LVIDYNEPEAMHSIAGAGPYDVILDA  260 (383)
Q Consensus       187 ~~~~~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~-~~~~~~----~lg~~-~v~~~~~~~~~~~i~~~~g~d~v~d~  260 (383)
                      .+.++||=.| +| .|..+..+++ .|++|++++.++ -.+.++    +.+.. .++..+..+    +.-...+|+|+..
T Consensus        40 ~~~~~iLDiG-cG-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~----l~~~~~fD~I~~~  112 (251)
T d1wzna1          40 REVRRVLDLA-CG-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE----IAFKNEFDAVTMF  112 (251)
T ss_dssp             SCCCEEEEET-CT-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG----CCCCSCEEEEEEC
T ss_pred             CCCCEEEEeC-CC-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhh----cccccccchHhhh
Confidence            5677899998 45 4888888887 588999999554 334443    33322 233332222    2222469998865


Q ss_pred             CCCCc--------ccccccccccccCCCceEEE
Q psy9949         261 AGIPL--------DQINSYLPFLKTGKFSKFVT  285 (383)
Q Consensus       261 ~g~~~--------~~~~~~~~~l~~~~~G~~v~  285 (383)
                      .+.-.        .....+.++|+  |+|.++.
T Consensus       113 ~~~~~~~~~~~~~~~L~~~~~~Lk--pgG~lii  143 (251)
T d1wzna1         113 FSTIMYFDEEDLRKLFSKVAEALK--PGGVFIT  143 (251)
T ss_dssp             SSGGGGSCHHHHHHHHHHHHHHEE--EEEEEEE
T ss_pred             hhhhhcCChHHHHHHHHHHHHHcC--CCcEEEE
Confidence            43211        11112267889  9998875

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=80.29  E-value=6  Score=30.04  Aligned_cols=88  Identities=23%  Similarity=0.214  Sum_probs=52.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCch----HH-HHHhcCCCeeeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDI-EVVTTCSGDA----KD-LVTSLNPNLVIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~-~Vi~~~~~~~----~~-~~~~lg~~~v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|.|.||+|-+|.-+++++..+-- ++..+.+++.    .. ....+-.+..+...+.+.   +.  .+.|++|-+.++.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~---~~--~~~dvvf~a~p~~   77 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEK---VS--KNCDVLFTALPAG   77 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHH---HH--HHCSEEEECCSTT
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhH---hc--cccceEEEccccH
Confidence            689999999999999999987654 7777764432    11 112222222222222111   11  1489999999987


Q ss_pred             cccccccccccccCCCceEEEecC
Q psy9949         265 LDQINSYLPFLKTGKFSKFVTLRS  288 (383)
Q Consensus       265 ~~~~~~~~~~l~~~~~G~~v~~~~  288 (383)
                      .....  ... .  .+.++|+.++
T Consensus        78 ~s~~~--~~~-~--~~~~VIDlSa   96 (176)
T d1vkna1          78 ASYDL--VRE-L--KGVKIIDLGA   96 (176)
T ss_dssp             HHHHH--HTT-C--CSCEEEESSS
T ss_pred             HHHHH--HHh-h--ccceEEecCc
Confidence            76443  221 2  4567777754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=80.21  E-value=1.1  Score=33.54  Aligned_cols=87  Identities=17%  Similarity=0.148  Sum_probs=51.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCchH-HHHHhcCCC--e---eeeCCChHHHHHHhcCCCccEEEEcCCCC
Q psy9949         191 RVLVLGASGGVGTMAVQLLKAWDIEVVTTCSGDAK-DLVTSLNPN--L---VIDYNEPEAMHSIAGAGPYDVILDAAGIP  264 (383)
Q Consensus       191 ~VlI~ga~g~vG~~ai~la~~~G~~Vi~~~~~~~~-~~~~~lg~~--~---v~~~~~~~~~~~i~~~~g~d~v~d~~g~~  264 (383)
                      +|+|.| +|.+|.+....+...|.+|..++++++. +.....+.+  .   .+......   .   ...+|++|-++-..
T Consensus         2 kI~IiG-aG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~D~iii~vka~   74 (167)
T d1ks9a2           2 KITVLG-CGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPD---F---LATSDLLLVTLKAW   74 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHH---H---HHTCSEEEECSCGG
T ss_pred             EEEEEC-cCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhh---h---hcccceEEEeeccc
Confidence            689999 7999998888888889999999976532 222222211  1   11122211   1   13689999998876


Q ss_pred             ccccc--ccccccccCCCceEEEe
Q psy9949         265 LDQIN--SYLPFLKTGKFSKFVTL  286 (383)
Q Consensus       265 ~~~~~--~~~~~l~~~~~G~~v~~  286 (383)
                      .....  .+...+.  ++..++.+
T Consensus        75 ~~~~~~~~l~~~~~--~~~~Iv~~   96 (167)
T d1ks9a2          75 QVSDAVKSLASTLP--VTTPILLI   96 (167)
T ss_dssp             GHHHHHHHHHTTSC--TTSCEEEE
T ss_pred             chHHHHHhhccccC--cccEEeec
Confidence            54332  0022334  55566665