Diaphorina citri psyllid: psy9958


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
MLIHIDQNPYLCDHCDQTFRQKQLLKRHVNLYHNPHYVPPSPKEKTHKCPECKKAFRHKGNLLRHMTLHDPDSELIEQQVALKLGRQKKVHIIDGHKVEVIPDDEEEEEGEETEEEEEGGGEDDGHQYVVLEVIQVQSEDGTQQNVAVVQSEDGTQQNVAVVPASSLMGMGATINEHGETG
cccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHccccccEECccccEEEcccccccccccccHHHHccccccccccEEEEEEEEEcccccccccEEEEEccccccccccccccccccccccccccccccc
MLIHIDQNPYLCDHCDQTFRQKQLLKRHVNLYHNPHYVPPSPKEKTHKCPECKKAFRHKGNLLRHMTLHDPDSELIEQQVALKLGRQKKVHIIDGHKVE***************************QYVVLEVIQV*********************************************
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MLIHIDQNPYLCDHCDQTFRQKQLLKRHVNLYHNPHYVPPSPKEKTHKCPECKKAFRHKGNLLRHMTLHDPDSELIEQQVALKLGRQKKVHIIDGHKVEVIPDDEEEEEGEETEEEEEGGGEDDGHQYVVLEVIQVQSEDGTQQNVAVVQSEDGTQQNVAVVPASSLMGMGATINEHGETG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0045892 [BP]negative regulation of transcription, DNA-dependentprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0010558, GO:0048523
GO:0043007 [BP]maintenance of rDNAprobableGO:0090304, GO:0034641, GO:0006807, GO:0044699, GO:0006139, GO:0044260, GO:1901360, GO:0016043, GO:0071704, GO:0071840, GO:0009987, GO:0006725, GO:0044763, GO:0008152, GO:0043570, GO:0046483, GO:0006996, GO:0044238, GO:0051276, GO:0044237, GO:0043170, GO:0006259, GO:0008150
GO:0043035 [MF]chromatin insulator sequence bindingprobableGO:0043566, GO:0097159, GO:0031490, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0003682, GO:1901363

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I13, chain A
Confidence level:very confident
Coverage over the Query: 2-93
View the alignment between query and template
View the model in PyMOL