Diaphorina citri psyllid: psy9966

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100-
MFQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDKSFIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYMSFSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFVQTDMKISIDVSVNLLKEEAVKYNSEPPNPLKERQIHGVLVIKDSSISLMDVDEACKEVGISRHIVRFTSNVQISDSSPINKTLELIYDQLLSYLQDKSQEYKIQLTESSLSIDSVLLSVERIDDKNKRVFVTWPNQDEEVGKIVLHVLKSMSNTQGQPFEFYPYTDTVFVLSSSRYVQGTYYLHTYLTSVTKHQKETMELIKNTIDEMIEFITPNIACVNTHTVHFMVEKLWETTIPKAILSQVNNSPSFDSLLEEFWKSRQDNHVETNSELVKFFQAADKFRLTSLMNGESIITVDELFSKLQARKCGQVVESAKVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGSTITVDELFSKLQARKCGLVVESAKVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRSKKLEDSEKESKGPFQSYAGVINKKLWMRTQNRQTSHASVEHHGKNWKRKSKAPVVSIKDEELVVCKDKCKQITHFVTPDSDISSILSQAYPQDSLHNVCIMGLHTCGDLSGTALRLFTKSSLQCLVQVGCCYHLLEEEFIRSPFWKDVDQSLYEHGYGFPLSEHLRSRKFFLGRNVRMSGTQSPERVIDLKQTQTLPLFYRALLEKYLRSKITINDEEPKVVGRLATKCSNFVEYVHRAVDKLKLDLEVDDEEVTRLFNSHQREYEYLQIYYFLKTALAPVIEALIVLDRVLYLREQQKPQIISNLFLSLLTQVDDEEVTRLFDSHQREYEYLQIYYFLKTALAPVIEALIVLDRVLYLREQQKPQSQF
cEEEEEccEEEEEEccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEcccccccccHHHHHHHHcccccccEEECcccccccHHHHHHccccEEEEcccEEEEEEEEEEEEEccccccHHHHHHHHHHccccCEEEEcccHHHHHHHHHHHHHHcccEEEccccccEEEEEccccEEEHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccccHHHHHHHHcccccEEEEEEEEECcccccHHHHHHHHHHHHHHHHccccccEEEEEccccEEEEEEEEEEEEECccccEEEEEcccccHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccEEEEccccHHcccccHHHHHHHccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccHHHccccccHHHHHHHHHHHHHHHHHHccccEEECcccccHHHHHHHccccccCEEEECcccccccHHHHHccHHHHHHHHcccccccccccccccccHHHHHccccccccccccccccccccccccccccccHHcccccccccCEEEccccccHHHHHccccccccccEEEEEcccccccccHHHHHHccccccEEEEEcccccccHHHHcccccccccccccccccccccccHHHHccccccccccHHHccccHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccCEcccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHEEccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
MFQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDKSFIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYMSFSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFVQTDMKISIDVSVNLLKEEAVK************QIHGVLVIKDSSISLMDVDEACKEVGISRHIVRFTSNVQISDSSPINKTLELIYDQLLSYLQDKSQEYKIQLTESSLSIDSVLLSVERIDDKNKRVFVTWPNQDEEVGKIVLHVLKSMSNTQGQPFEFYPYTDTVFVLSSSRYVQGTYYLHTYLTSVTKHQKETMELIKNTIDEMIEFITPNIACVNTHTVHFMVEKLWETTIPKAILSQVNNSPSFDSLLEEFWKSRQDNHVETNSELVKFFQAADKFRLTSLMNGESIITVDELFSKLQARKCGQVVESAKVS***S*KKSYEVQVMSQVVAAVTNSCDSSHIIDLGSTITVDELFSKLQARK*GLVVESAKVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNT***********************YAGVINKKLWM****************************************KCKQITHFVTPDSDISSILSQAYP*DSLHNVCIMGLHTCGDLSGTALRLFTKSSLQCLVQVGCCYHLLEEEFIRSPFWKDVDQSLYEHGYGFPLSEHLRSRKFFLGRNVRMSGTQS**RVIDLKQTQTLPLFYRALLEKYLRSKITINDEEPKVVGRLATKCSNFVEYVHRAVDKLKLDLEVDDEEVTRLFNSHQREYEYLQIYYFLKTALAPVIEALIVLDRVLYLREQQKPQIISNLFLSLLTQVDDEEVTRLFDSHQREYEYLQIYYFLKTALAPVIEALIVLDRVLYLR*********
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MFQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDKSFIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYMSFSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFVQTDMKISIDVSVNLLKEEAVKYNSEPPNPLKERQIHGVLVIKDSSISLMDVDEACKEVGISRHIVRFTSNVQISDSSPINKTLELIYDQLLSYLQDKSQEYKIQLTESSLSIDSVLLSVERIDDKNKRVFVTWPNQDEEVGKIVLHVLKSMSNTQGQPFEFYPYTDTVFVLSSSRYVQGTYYLHTYLTSVTKHQKETMELIKNTIDEMIEFITPNIACVNTHTVHFMVEKLWETTIPKAILSQVNNSPSFDSLLEEFWKSRQDNHVETNSELVKFFQAADKFRLTSLMNGESIITVDELFSKLQARKCGQVVESAKVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGSTITVDELFSKLQARKCGLVVESAKVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRSKKLEDSEKESKGPFQSYAGVINKKLWMRTQNRQTSHASVEHHGKNWKRKSKAPVVSIKDEELVVCKDKCKQITHFVTPDSDISSILSQAYPQDSLHNVCIMGLHTCGDLSGTALRLFTKSSLQCLVQVGCCYHLLEEEFIRSPFWKDVDQSLYEHGYGFPLSEHLRSRKFFLGRNVRMSGTQSPERVIDLKQTQTLPLFYRALLEKYLRSKITINDEEPKVVGRLATKCSNFVEYVHRAVDKLKLDLEVDDEEVTRLFNSHQREYEYLQIYYFLKTALAPVIEALIVLDRVLYLREQQKPQIISNLFLSLLTQVDDEEVTRLFDSHQREYEYLQIYYFLKTALAPVIEALIVLDRVLYLREQQKPQSQF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Integrator complex subunit 11 Catalytic component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. Mediates the snRNAs 3' cleavage.confidentQ5ZIH0
Integrator complex subunit 11 Catalytic component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes. Mediates the snRNAs 3' cleavage.confidentQ9CWS4
Integrator complex subunit 11 Catalytic component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes. Mediates the snRNAs 3' cleavage.confidentQ2YDM2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005488 [MF]bindingprobableGO:0003674
GO:0007275 [BP]multicellular organismal developmentprobableGO:0032502, GO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0048856 [BP]anatomical structure developmentprobableGO:0032502, GO:0008150
GO:0034472 [BP]snRNA 3'-end processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0016180, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0034470, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0043628, GO:0046483, GO:0016070, GO:0044238, GO:0016073, GO:0044237, GO:0043170, GO:0006396
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I7T, chain A
Confidence level:very confident
Coverage over the Query: 1-106,140-287
View the alignment between query and template
View the model in PyMOL
Template: 3GRU, chain A
Confidence level:probable
Coverage over the Query: 674-731
View the alignment between query and template
View the model in PyMOL