Domain ID e2pmzA4

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  • A: a+b complex topology
  • X: first helical domain in RNA-polymerase beta-prime subunit
  • H: first helical domain in RNA-polymerase beta-prime subunit
  • T: first helical domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_3
UID: 001117599
ID: e2pmzA4
Source structure type: experimental structure
ECOD representative type: Manual and representative domain
Range: A:495-644
PDB: 2pmz
PDB Description: DNA-directed RNA polymerase subunit A

Structure of domain e2pmzA4

Domains in the same protein:

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e2pmzA1 A:4-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e2pmzA2 A:307-347,A:411-494 cradle loop barrel RIFT-related double psi
e2pmzA5 A:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e2pmzA3 A:348-410 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2pmzA4 A:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit

Domains in the same PDB:

e2pmzA1 A:4-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e2pmzA3 A:348-410 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2pmzA2 A:307-347,A:411-494 cradle loop barrel RIFT-related double psi
e2pmzA5 A:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e2pmzA4 A:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e2pmzB6 B:750-872 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2pmzB4 B:5-167,B:342-472 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2pmzB3 B:713-749,B:873-995 cradle loop barrel RIFT-related double psi
e2pmzB1 B:473-572 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e2pmzB2 B:168-341 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e2pmzB7 B:573-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e2pmzB5 B:996-1119 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2pmzC04 C:154-196,C:200-238 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2pmzC02 C:72-121,C:197-199,C:282-390 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2pmzC1 C:66-146,C:238-395 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e2pmzC2 C:11-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e2pmzC03 C:122-153,C:239-281 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2pmzC01 C:4-71 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e2pmzD1 D:2-36,D:159-265 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e2pmzD2 D:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e2pmzE2 E:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e2pmzE1 E:79-180 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e2pmzF01 F:1-113 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2pmzF1 F:1-89 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2pmzG04 G:154-196,G:200-238 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2pmzG2 G:11-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e2pmzG1 G:66-146,G:238-395 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e2pmzG01 G:4-71 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e2pmzG02 G:72-121,G:197-199,G:282-390 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2pmzG03 G:122-153,G:239-281 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2pmzH1 H:9-82 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e2pmzK1 K:11-92 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e2pmzL1 L:1-92 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e2pmzN1 N:1-64 HTH RPB10 RPB10
e2pmzP1 P:6-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2pmzQ5 Q:307-347,Q:411-494 cradle loop barrel RIFT-related double psi
e2pmzQ3 Q:4-96,Q:174-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e2pmzQ4 Q:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e2pmzQ2 Q:348-410 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2pmzQ1 Q:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e2pmzR5 R:996-1119 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2pmzR4 R:713-749,R:873-995 cradle loop barrel RIFT-related double psi
e2pmzR1 R:473-572 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e2pmzR2 R:573-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e2pmzR3 R:168-341 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e2pmzR7 R:750-872 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2pmzR6 R:5-167,R:342-472 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2pmzS1 S:2-36,S:159-265 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e2pmzS2 S:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e2pmzT1 T:79-180 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e2pmzT2 T:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e2pmzU01 U:1-113 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2pmzU1 U:1-89 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2pmzV1 V:9-82 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e2pmzW1 W:11-92 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e2pmzX1 X:1-92 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e2pmzY1 Y:1-64 HTH RPB10 RPB10
e2pmzZ1 Z:6-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related