Domain ID e3hkzM4

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  • A: a+b complex topology
  • X: central helical domain in RNA-polymerase beta-prime subunit
  • H: central helical domain in RNA-polymerase beta-prime subunit
  • T: central helical domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_5
UID: 001852173
ID: e3hkzM4
Source structure type: experimental structure
ECOD representative type: Automatic domain
Parent: e3hkzC2
Range: M:66-115,M:276-395
PDB: 3hkz
PDB Description: DNA-directed RNA polymerase subunit A''

Structure of domain e3hkzM4

Domains in the same protein:

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e3hkzM4 M:66-115,M:276-395 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e3hkzM2 M:116-147,M:233-275 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e3hkzM3 M:11-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e3hkzM1 M:148-232 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e3hkzA1 A:307-494 cradle loop barrel RIFT-related double psi
e3hkzA4 A:4-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e3hkzA3 A:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e3hkzA2 A:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e3hkzB1 B:750-872 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3hkzB7 B:5-167,B:342-472 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e3hkzB3 B:713-749,B:873-995 cradle loop barrel RIFT-related double psi
e3hkzB4 B:573-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e3hkzB6 B:473-572 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e3hkzB5 B:996-1119 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e3hkzB2 B:168-341 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e3hkzC1 C:11-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e3hkzC2 C:66-115,C:276-395 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e3hkzC3 C:116-147,C:233-275 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e3hkzC4 C:148-232 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e3hkzD2 D:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e3hkzD1 D:2-36,D:159-265 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e3hkzE1 E:79-180 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e3hkzE2 E:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e3hkzF01 F:1-113 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3hkzF1 F:1-89 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3hkzG1 G:5-117 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e3hkzH1 H:9-82 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e3hkzI1 I:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e3hkzI4 I:307-494 cradle loop barrel RIFT-related double psi
e3hkzI3 I:4-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e3hkzI2 I:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e3hkzJ5 J:473-572 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e3hkzJ6 J:573-712 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e3hkzJ4 J:5-167,J:342-472 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e3hkzJ7 J:168-341 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e3hkzJ2 J:996-1119 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e3hkzJ1 J:713-749,J:873-995 cradle loop barrel RIFT-related double psi
e3hkzJ3 J:750-872 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3hkzK1 K:11-92 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e3hkzL1 L:1-92 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e3hkzM3 M:11-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e3hkzM1 M:148-232 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e3hkzM4 M:66-115,M:276-395 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e3hkzM2 M:116-147,M:233-275 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e3hkzN1 N:1-64 HTH RPB10 RPB10
e3hkzO2 O:2-36,O:159-265 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e3hkzO1 O:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e3hkzP1 P:6-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3hkzQ1 Q:79-180 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e3hkzQ2 Q:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e3hkzR01 R:1-113 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3hkzR1 R:1-89 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3hkzS1 S:5-117 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e3hkzT1 T:9-82 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e3hkzU1 U:11-92 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e3hkzV1 V:1-92 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e3hkzW1 W:1-64 HTH RPB10 RPB10
e3hkzX1 X:6-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3hkzY1 Y:38-82 YqgQ-like YqgQ-like YqgQ-like
e3hkzY01 Y:33-90 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 UBA-like domain
e3hkzZ01 Z:33-90 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 UBA-like domain
e3hkzZ1 Z:38-82 YqgQ-like YqgQ-like YqgQ-like