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Summary
Structure view
Domain organization
Domain ID e4m8oA3
Download files:
FASTA
Coordinates
A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: DNA_pol_B_exo1
UID:
001121969
ID:
e4m8oA3
Source structure type:
experimental structure
ECOD representative type:
Manual
and representative
domain
Range:
A:282-511
DrugDomain:
P21951_CL
P21951_DTP
PDB:
4m8o
PDB Description:
DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A
Domain
In chain context
In PDB context
Structure of domain e4m8oA3
Domains in the same protein:
Download Pymol
e4m8oA3
A:282-511
Ribonuclease H-like
Ribonuclease H-like
Ribonuclease H-like
e4m8oA4
A:512-766,A:839-985
Alpha-beta plaits
Adenylyl and guanylyl cyclase catalytic domain-like
Adenylyl and guanylyl cyclase catalytic domain-like
e4m8oA5
A:767-838
"fingers" domain in bacteriophage RB69-like DNA polymerase I
"fingers" domain in bacteriophage RB69-like DNA polymerase I
"fingers" domain in bacteriophage RB69-like DNA polymerase I
e4m8oA6
A:986-1186
"thumb" domain in bacteriophage RB69-like DNA polymerase I
"thumb" domain in bacteriophage RB69-like DNA polymerase I
"thumb" domain in bacteriophage RB69-like DNA polymerase I
e4m8oA1
A:31-136,A:248-281
OB-fold
Nucleic acid-binding protein
Nucleic acid-binding protein
e4m8oA2
A:137-247
Alpha-beta plaits
Family B DNA polymerase insertion domain
Family B DNA polymerase insertion domain
Domains in the same PDB:
e4m8oA3
A:282-511
Ribonuclease H-like
Ribonuclease H-like
Ribonuclease H-like
e4m8oA4
A:512-766,A:839-985
Alpha-beta plaits
Adenylyl and guanylyl cyclase catalytic domain-like
Adenylyl and guanylyl cyclase catalytic domain-like
e4m8oA5
A:767-838
"fingers" domain in bacteriophage RB69-like DNA polymerase I
"fingers" domain in bacteriophage RB69-like DNA polymerase I
"fingers" domain in bacteriophage RB69-like DNA polymerase I
e4m8oA6
A:986-1186
"thumb" domain in bacteriophage RB69-like DNA polymerase I
"thumb" domain in bacteriophage RB69-like DNA polymerase I
"thumb" domain in bacteriophage RB69-like DNA polymerase I
e4m8oA1
A:31-136,A:248-281
OB-fold
Nucleic acid-binding protein
Nucleic acid-binding protein
e4m8oA2
A:137-247
Alpha-beta plaits
Family B DNA polymerase insertion domain
Family B DNA polymerase insertion domain