Domain ID e5oikY1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Spt4
UID: 002117240
ID: e5oikY1
Source structure type: experimental structure
ECOD representative type: Automatic domain
Parent: e1ryqA1
Range: Y:2-117
DrugDomain: P63272_ZN
PDB: 5oik
PDB Description: Transcription elongation factor SPT4

Structure of domain e5oikY1

Domains in the same protein:

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e5oikY1 Y:2-117 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e5oikA01 A:1-345,A:569-570,A:618,A:668-672 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5oikA5 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e5oikA2 A:11-155,A:181-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5oikA08 A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5oikA03 A:390-450 cradle loop barrel RIFT-related double psi
e5oikA4 A:1083-1135,A:1361-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5oikA07 A:1056-1088 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e5oikA10 A:1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5oikA1 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e5oikA05 A:687-895,A:897-898 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5oikA04 A:537-568,A:571-617,A:619-667,A:673-686 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5oikA3 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5oikA9 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5oikA6 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5oikA7 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5oikA06 A:896,A:899-927 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e5oikA8 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5oikA09 A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5oikA02 A:346-389,A:451-536 cradle loop barrel RIFT-related double psi
e5oikB5 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e5oikB7 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5oikB2 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5oikB3 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e5oikB1 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5oikB6 B:16-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5oikB4 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5oikC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5oikC1 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5oikD1 D:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e5oikE2 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e5oikE1 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e5oikF1 F:46-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e5oikG2 G:78-171 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e5oikG1 G:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e5oikH1 H:2-149 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e5oikI1 I:9-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5oikI2 I:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5oikJ1 J:1-67 HTH RPB10 RPB10
e5oikK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5oikL1 L:14-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5oikY1 Y:2-117 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5oikZ6 Z:703-754 SH3 SH3 SH3
e5oikZ5 Z:581-646 SH3 SH3 SH3
e5oikZ4 Z:416-470 SH3 SH3 SH3
e5oikZ2 Z:176-269 Alpha-beta plaits N-utilization substance G protein NusG, N-terminal domain N-utilization substance G protein NusG, N-terminal domain
e5oikZ7 Z:527-580 SH3 SH3 SH3
e5oikZ3 Z:471-526 SH3 SH3 SH3
e5oikZ1 Z:270-396 SH3 SH3 SH3