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Summary
Structure view
Domain organization
Domain ID e5uh5D7
Download files:
FASTA
Coordinates
A: a+b complex topology
X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
T: Single hybrid motif
F:
UID:
002061129
ID:
e5uh5D7
Source structure type:
experimental structure
ECOD representative type:
Automatic
and representative
domain
Range:
D:148-208
PDB:
5uh5
PDB Description:
DNA-directed RNA polymerase subunit beta'
Domain
In chain context
In PDB context
Structure of domain e5uh5D7
Domains in the same protein:
Download Pymol
e5uh5D9
D:3-147,D:250-421
N-terminal domain in RNA-polymerase beta-prime subunit
N-terminal domain in RNA-polymerase beta-prime subunit
N-terminal domain in RNA-polymerase beta-prime subunit
e5uh5D10
D:409-452,D:493-573
cradle loop barrel
RIFT-related
double psi
e5uh5D7
D:148-208
alpha/beta-Hammerhead/Barrel-sandwich hybrid
alpha/beta-Hammerhead/Barrel-sandwich hybrid
Single hybrid motif
e5uh5D2
D:453-492
inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e5uh5D1
D:574-730
first helical domain in RNA-polymerase beta-prime subunit
first helical domain in RNA-polymerase beta-prime subunit
first helical domain in RNA-polymerase beta-prime subunit
e5uh5D5
D:731-888
second helical domain in RNA-polymerase beta-prime subunit
second helical domain in RNA-polymerase beta-prime subunit
second helical domain in RNA-polymerase beta-prime subunit
e5uh5D4
D:209-249
alpha/beta-Hammerhead/Barrel-sandwich hybrid
alpha/beta-Hammerhead/Barrel-sandwich hybrid
Single hybrid motif
e5uh5D3
D:975-1023,D:1099-1281
central helical domain in RNA-polymerase beta-prime subunit
central helical domain in RNA-polymerase beta-prime subunit
central helical domain in RNA-polymerase beta-prime subunit
e5uh5D6
D:889-974
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
Domains in the same PDB:
e5uh5A2
A:48-169
Ribosomal protein TL5/L25 C-terminal domain-like
Insert subdomain of RNA polymerase alpha subunit
Insert subdomain of RNA polymerase alpha subunit
e5uh5A1
A:3-47,A:170-226
DCoH-like
RBP11-like subunits of RNA polymerase
RBP11-like subunits of RNA polymerase
e5uh5B2
B:6-47,B:170-232
DCoH-like
RBP11-like subunits of RNA polymerase
RBP11-like subunits of RNA polymerase
e5uh5B1
B:48-169
Ribosomal protein TL5/L25 C-terminal domain-like
Insert subdomain of RNA polymerase alpha subunit
Insert subdomain of RNA polymerase alpha subunit
e5uh5C2
C:1036-1153
C-terminal domain in beta subunit of DNA dependent RNA-polymerase
C-terminal domain in beta subunit of DNA dependent RNA-polymerase
C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5uh5C3
C:748-879
alpha/beta-Hammerhead/Barrel-sandwich hybrid
alpha/beta-Hammerhead/Barrel-sandwich hybrid
Single hybrid motif
e5uh5C5
C:639-709
alpha/beta-Hammerhead/Barrel-sandwich hybrid
alpha/beta-Hammerhead/Barrel-sandwich hybrid
Single hybrid motif
e5uh5C1
C:28-181,C:377-502
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5uh5C7
C:503-638
barrel domain in beta subunit of DNA dependent RNA-polymerase
barrel domain in beta subunit of DNA dependent RNA-polymerase
barrel domain in beta subunit of DNA dependent RNA-polymerase
e5uh5C6
C:182-376
insertion domain in beta subunit of DNA dependent RNA-polymerase
insertion domain in beta subunit of DNA dependent RNA-polymerase
insertion domain in beta subunit of DNA dependent RNA-polymerase
e5uh5C4
C:710-747,C:880-1035
cradle loop barrel
RIFT-related
double psi
e5uh5D9
D:3-147,D:250-421
N-terminal domain in RNA-polymerase beta-prime subunit
N-terminal domain in RNA-polymerase beta-prime subunit
N-terminal domain in RNA-polymerase beta-prime subunit
e5uh5D10
D:409-452,D:493-573
cradle loop barrel
RIFT-related
double psi
e5uh5D7
D:148-208
alpha/beta-Hammerhead/Barrel-sandwich hybrid
alpha/beta-Hammerhead/Barrel-sandwich hybrid
Single hybrid motif
e5uh5D2
D:453-492
inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit
e5uh5D1
D:574-730
first helical domain in RNA-polymerase beta-prime subunit
first helical domain in RNA-polymerase beta-prime subunit
first helical domain in RNA-polymerase beta-prime subunit
e5uh5D5
D:731-888
second helical domain in RNA-polymerase beta-prime subunit
second helical domain in RNA-polymerase beta-prime subunit
second helical domain in RNA-polymerase beta-prime subunit
e5uh5D4
D:209-249
alpha/beta-Hammerhead/Barrel-sandwich hybrid
alpha/beta-Hammerhead/Barrel-sandwich hybrid
Single hybrid motif
e5uh5D3
D:975-1023,D:1099-1281
central helical domain in RNA-polymerase beta-prime subunit
central helical domain in RNA-polymerase beta-prime subunit
central helical domain in RNA-polymerase beta-prime subunit
e5uh5D6
D:889-974
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5uh5E1
E:28-108
RPB6/omega subunit-like
RPB6/omega subunit-like
RNA polymerase omega subunit
e5uh5F3
F:392-394,F:421-528
HTH
HTH
Three-helical HTH
e5uh5F1
F:364-420
HTH
HTH
Three-helical HTH
e5uh5F2
F:207-363
Sigma2 domain-like
Sigma2 domain of RNA polymerase sigma factors
Sigma2 domain of RNA polymerase sigma factors