Domain ID e6xreE1

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  • A: a+b two layers
  • X: RPB5-like RNA polymerase subunit
  • H: RPB5-like RNA polymerase subunit
  • T: RPB5-like RNA polymerase subunit
  • F: RNA_pol_Rpb5_C
UID: 002736466
ID: e6xreE1
Source structure type: experimental structure
ECOD representative type: Automatic domain
Parent: e1dzfA1
Range: E:139-210
PDB: 6xre
PDB Description: DNA-directed RNA polymerase II subunit RPB5

Structure of domain e6xreE1

Domains in the same protein:

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e6xreE1 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6xreE2 E:4-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain

Domains in the same PDB:

e6xreA3 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6xreA07 A:1056-1088 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6xreA1 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6xreA09 A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6xreA03 A:390-450 cradle loop barrel RIFT-related double psi
e6xreA4 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6xreA10 A:1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6xreA5 A:19-155,A:181-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6xreA7 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e6xreA08 A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xreA04 A:537-568,A:571-617,A:619-667,A:673-686 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e6xreA05 A:687-895,A:897-898 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e6xreA8 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e6xreA2 A:1083-1135,A:1361-1485 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e6xreA6 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e6xreA01 A:1-345,A:569-570,A:618,A:668-672 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e6xreA02 A:346-389,A:451-536 cradle loop barrel RIFT-related double psi
e6xreA9 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6xreA06 A:896,A:899-927 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e6xreB1 B:1054-1165 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6xreB5 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e6xreB6 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e6xreB2 B:16-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e6xreB4 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e6xreB3 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e6xreB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e6xreC2 C:1-42,C:179-275 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6xreC1 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e6xreD1 D:14-142 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e6xreE1 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e6xreE2 E:4-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e6xreF1 F:50-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e6xreG2 G:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e6xreG1 G:78-171 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e6xreH1 H:1-150 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e6xreI2 I:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6xreI1 I:8-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6xreJ1 J:1-67 HTH RPB10 RPB10
e6xreK1 K:1-117 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e6xreL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6xreM2 M:12-61 p53 transactivation domain p53 transactivation domain p53 transactivation domain
e6xreM1 M:88-291 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e6xreM01 M:1-61 p53 transactivation domain p53 transactivation domain p53 transactivation domain
e6xreM03 M:323-355 p53 tetramerization domain p53 tetramerization domain p53 tetramerization domain
e6xreM02 M:94-292,M:322 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e6xreM3 M:319-351 p53 tetramerization domain p53 tetramerization domain p53 tetramerization domain