Domain ID e8gxsPI1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: RNA_POL_M_15KD
UID: 002994586
ID: e8gxsPI1
Source structure type: experimental structure
ECOD representative type: Automatic domain
Parent: e1twfI1
Range: PI:12-59
PDB: 8gxs
PDB Description: DNA-directed RNA polymerase II subunit RPB9

Structure of domain e8gxsPI1

Domains in the same protein:

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e8gxsPI2 PI:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsPI1 PI:12-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e8gxsBA1 BA:14-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsBA3 BA:208-316 HTH HTH Cyclin-like
e8gxsBA2 BA:106-207 HTH HTH Cyclin-like
e8gxsDB3 DB:255-648 Zincin-like Metalloproteases ("zincins") catalytic domain Metalloproteases ("zincins") catalytic domain
e8gxsDB2 DB:19-254 Baculovirus p35 protein-related Baculovirus p35 protein-related Baculovirus p35 protein-related
e8gxsDB1 DB:649-988 Repetitive alpha hairpins ARM repeat ARM repeat
e8gxsDe1 De:202-343,De:363-380 Taf5 N-terminal domain-like Taf5 N-terminal domain-like Taf5 N-terminal domain-like
e8gxsDe2 De:417-799 beta-propeller-like beta-propeller 8-bladed
e8gxsDE1 DE:417-798 beta-propeller-like beta-propeller 8-bladed
e8gxsDE2 DE:209-378 Taf5 N-terminal domain-like Taf5 N-terminal domain-like Taf5 N-terminal domain-like
e8gxsDj1 Dj:114-218 Histone-like Histone-related Histone
e8gxsDJ1 DJ:114-217 Histone-like Histone-related Histone
e8gxsDk1 Dk:114-211 Histone-like Histone-related Histone
e8gxsDL1 DL:57-130 Histone-like Histone-related Histone
e8gxsDO1 DO:1-53 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e8gxsDO2 DO:54-99 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e8gxsDP1 DP:256-337 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e8gxsDP2 DP:159-255 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e8gxsDQ2 DQ:322-376 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e8gxsDQ1 DQ:9-51,DQ:308-321 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e8gxse1 e:42-149 Mediator hinge subcomplex-like Mediator hinge subcomplex-like RNA polymerase II holoenzyme component SRB7 (MED21)
e8gxsEA2 EA:10-103 HTH HTH winged helix domain
e8gxsEA1 EA:104-196 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsEB2 EB:210-242 HTH HTH winged helix domain
e8gxsEB3 EB:72-146 HTH HTH winged helix domain
e8gxsEB1 EB:147-209 HTH HTH winged helix domain
e8gxsf1 f:7-149 Mediator of RNA polymerase II transcription subunit 6 Mediator of RNA polymerase II transcription subunit 6 Mediator of RNA polymerase II transcription subunit 6
e8gxsFA1 FA:5-54,FA:93-180 triple barrel triple barrel Rap30/74 interaction domains-like
e8gxsg1 g:91-175 Mediator hinge subcomplex-like Mediator hinge subcomplex-like MED7 hinge region
e8gxsHA2 HA:447-728 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e8gxsHA1 HA:1-243 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e8gxsHA3 HA:244-446 XPD arch domain XPD arch domain XPD arch domain
e8gxsHE1 HE:265-292 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsHE2 HE:8-72,HE:95-264 HAD domain-like HAD domain-related vWA-like
e8gxsHF1 HF:3-68 TFB5-related TFB5-related TFB5-related
e8gxsHG1 HG:317-387 RING/U-box-like RING/U-box-like Cysteine-rich domain
e8gxsHG2 HG:239-316 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsHG3 HG:7-24,HG:53-238 HAD domain-like HAD domain-related vWA-like
e8gxsHI1 HI:13-311 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e8gxsHJ2 HJ:162-289 HTH HTH Cyclin-like
e8gxsHJ1 HJ:3-161 HTH HTH Cyclin-like
e8gxsm1 m:13-124 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31
e8gxsNA1 NA:436-535 Histone-like Histone-related Histone
e8gxsNA01 NA:400-535 Histone-like Histone-related Histone
e8gxsNB1 NB:23-102 Histone-like Histone-related Histone
e8gxsNC1 NC:816-918 Histone-like Histone-related Histone
e8gxsND1 ND:1228-1322 Histone-like Histone-related Histone
e8gxsND01 ND:1233-1322 Histone-like Histone-related Histone
e8gxsNE1 NE:633-735 Histone-like Histone-related Histone
e8gxsNE01 NE:600-735 Histone-like Histone-related Histone
e8gxsNF1 NF:217-302 Histone-like Histone-related Histone
e8gxsNG1 NG:1016-1122 Histone-like Histone-related Histone
e8gxsNH01 NH:1433-1522 Histone-like Histone-related Histone
e8gxsNH1 NH:1428-1522 Histone-like Histone-related Histone
e8gxsPB6 PB:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e8gxsPB2 PB:769-805,PB:930-1053 cradle loop barrel RIFT-related double psi
e8gxsPB1 PB:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e8gxsPB5 PB:15-67,PB:87-200,PB:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8gxsPB3 PB:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e8gxsPB4 PB:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e8gxsPB7 PB:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8gxsPC1 PC:2-42,PC:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8gxsPC2 PC:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e8gxsPD1 PD:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e8gxsPE1 PE:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e8gxsPE2 PE:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e8gxsPF1 PF:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e8gxsPF01 PF:1-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e8gxsPG1 PG:78-171 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e8gxsPG2 PG:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e8gxsPH1 PH:2-149 OB-fold Nucleic acid-binding protein Nucleic acid-binding protein
e8gxsPI2 PI:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsPI1 PI:12-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsPJ1 PJ:1-64 HTH RPB10 RPB10
e8gxsPK1 PK:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8gxsPL1 PL:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8gxsr1 r:15-206 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e8gxst1 t:1-205 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e8gxsu1 u:4-132 Mediator hinge subcomplex-like Mediator hinge subcomplex-like RNA polymerase II holoenzyme component SRB7 (MED21)
e8gxsv1 v:8-141 Mediator of RNA polymerase II transcription subunit 22 Mediator of RNA polymerase II transcription subunit 22 Mediator of RNA polymerase II transcription subunit 22
e8gxsy1 y:14-231 HAD domain-like HAD domain-related vWA-like