Home Help

X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


Keyword search


Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

X: Baseplate structural protein gp8
H: Baseplate structural protein gp8
T: Baseplate structural protein gp8
F: Phage-Gp8

PF09215 CL0187

Representatives:

e1n7zA1[A:7-91,A:206-334] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.0Å

e1n7zB1[B:7-91,B:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.0Å

e1n7zC2[C:7-91,C:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.0Å

e1n7zD1[D:7-91,D:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.0Å

e1n80A1[A:7-91,A:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.45Å

e1n80B1[B:7-91,B:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.45Å

e1n80C1[C:7-91,C:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.45Å

e1n80D1[D:7-91,D:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: CL ; X-RAY DIFFRACTION 2.45Å

e1n8bA2[A:7-91,A:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: BR ; X-RAY DIFFRACTION 2.9Å

e1n8bB1[B:7-91,B:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: BR ; X-RAY DIFFRACTION 2.9Å

e1n8bC1[C:7-91,C:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: BR ; X-RAY DIFFRACTION 2.9Å

e1n8bD2[D:7-91,D:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BASEPLATE STRUCTURAL PROTEIN GP8 ; ligands: BR ; X-RAY DIFFRACTION 2.9Å

e5hx2B2[B:1-91,B:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5hx2C1[C:3-91,C:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5D1[D:7-91,D:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5E2[E:3-91,E:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5a2[a:7-91,a:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5b2[b:3-91,b:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5x2[x:7-91,x:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5y2[y:3-91,y:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5CA2[CA:7-91,CA:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5CB1[CB:3-91,CB:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5ED2[ED:7-91,ED:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5EE2[EE:3-91,EE:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5GG2[GG:7-91,GG:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv5GH2[GH:3-91,GH:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7D2[D:7-91,D:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7E2[E:3-91,E:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7T2[T:7-91,T:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7U2[U:3-91,U:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7j1[j:7-91,j:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7k2[k:3-91,k:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7z1[z:7-91,z:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7AA2[AA:3-91,AA:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7CB1[CB:7-91,CB:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7CC1[CC:3-91,CC:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7ED1[ED:7-91,ED:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

e5iv7EE2[EE:3-91,EE:206-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baseplate wedge protein gp8 ; ELECTRON MICROSCOPY

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes