Home Help

X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


Keyword search


Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: ClpS-like

contains a HTH motif

X: TBP-like
H: Bet v1-like
T: Bet v1-like
F: Ring_hydroxyl_A

PF00848 CL0209

Representatives:

e2bmoA2[A:153-439] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

OXYGENASE-ALPHA NBDO ; ligands: EDO,EOH,FE ; X-RAY DIFFRACTION 1.200Å

e2b1xA2[A:163-441] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; ligands: FE,MPD ; X-RAY DIFFRACTION 2.0Å

e8h2tB3[B:163-437] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: FE,IAC ; ELECTRON MICROSCOPY

e8h2tD2[D:163-437] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: FE,IAC ; ELECTRON MICROSCOPY

e8h2tG3[G:163-437] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: FE,IAC ; ELECTRON MICROSCOPY

e2b24E2[E:163-440] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; ligands: FE,IND ; X-RAY DIFFRACTION 3.0Å

e2b24C2[C:163-440] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; ligands: FE,IND ; X-RAY DIFFRACTION 3.0Å

e2b1xE2[E:163-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; ligands: FE,MPD ; X-RAY DIFFRACTION 2.0Å

e2b24A2[A:163-440] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; ligands: FE,IND ; X-RAY DIFFRACTION 3.0Å

e2b1xC2[C:163-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; ligands: FE,MPD ; X-RAY DIFFRACTION 2.0Å

e1uljE2[E:171-451] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE LARGE SUBUNIT ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.6Å

e1wqlA2[A:181-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

IRON-SULFUR PROTEIN LARGE SUBUNIT OF CUMENE DIOXYGENASE ; ligands: FE2,OXY ; X-RAY DIFFRACTION 2.2Å

e1uljA2[A:171-451] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE LARGE SUBUNIT ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.6Å

e1uliC2[C:171-451] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE LARGE SUBUNIT ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e1uljC2[C:171-451] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE LARGE SUBUNIT ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.6Å

e1uliE2[E:171-451] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE LARGE SUBUNIT ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e1eg9A2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT) ; ligands: FE,IND ; X-RAY DIFFRACTION 1.6Å

e2hmjA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO,FE,SO4 ; X-RAY DIFFRACTION 1.500Å

e2bmqA2[A:153-439] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

OXYGENASE-ALPHA NBDO ; ligands: EDO,EOH,FE,NBZ ; X-RAY DIFFRACTION 1.550Å

e2hmkA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO,FE,PEY,SO4 ; X-RAY DIFFRACTION 1.650Å

e1o7pA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO,FE,NDH ; X-RAY DIFFRACTION 1.95Å

e2hmoA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: 3NT,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.6Å

e2hmmA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Naphthalene 1,2-dioxygenase alpha subunit ; ligands: AN3,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.600Å

e1o7gA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO,FE,NPY,SO4 ; X-RAY DIFFRACTION 1.7Å

e1o7mA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO,FE,OXY ; X-RAY DIFFRACTION 1.750Å

e1ndoE2[E:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ; ligands: FE ; X-RAY DIFFRACTION 2.25Å

e2hmnA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Naphthalene 1,2-dioxygenase alpha subunit ; ligands: AN3,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.700Å

e2hmlA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO,FE,PEY,SO4 ; X-RAY DIFFRACTION 1.800Å

e1o7wA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO,FE ; X-RAY DIFFRACTION 1.9Å

e1ndoC2[C:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ; ligands: FE ; X-RAY DIFFRACTION 2.25Å

e1o7hA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO,FE,SO4 ; X-RAY DIFFRACTION 2.2Å

e1uuvA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO,FE,IND,NO ; X-RAY DIFFRACTION 1.65Å

e2bmrA2[A:153-439] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

OXYGENASE-ALPHA NBDO ; ligands: 3NT,EDO,EOH,FE ; X-RAY DIFFRACTION 1.500Å

e1o7nA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO,FE,IND,OXY ; X-RAY DIFFRACTION 1.400Å

e1uuwA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: FE,NO ; X-RAY DIFFRACTION 2.3Å

e1ndoA2[A:155-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NAPHTHALENE 1,2-DIOXYGENASE ; ligands: FE ; X-RAY DIFFRACTION 2.25Å

e3gzxA2[A:180-457] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Biphenyl dioxygenase subunit alpha ; ligands: BNL,FE2,GOL,MES ; X-RAY DIFFRACTION 1.580Å

e2xr8A2[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e3en1A2[A:169-440] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzene 1,2-dioxygenase subunit alpha ; ligands: FE2,MBN,PE3 ; X-RAY DIFFRACTION 3.200Å

e3eqqA1[A:169-444] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzene 1,2-dioxygenase subunit alpha ; X-RAY DIFFRACTION 3.200Å

e3gzyA2[A:180-457] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 1.62Å

e2xrxA2[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxC2[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxE2[E:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxG2[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxI2[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxK2[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxM2[M:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxO2[O:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxQ2[Q:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxS2[S:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxU2[U:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xrxW2[W:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 2.42Å

e2xr8E2[E:171-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xsoQ2[Q:171-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e4hjlA2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: 15O,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.5Å

e4hkvA2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

Naphthalene 1,2-dioxygenase subunit alpha ; ligands: EDO,FE,SO4,UNU ; X-RAY DIFFRACTION 1.650Å

e4hm1A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: 1ON,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.5Å

e4hm2A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

Naphthalene 1,2-dioxygenase subunit alpha ; ligands: 16M,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.260Å

e4hm3A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO,FE,PYJ,SO4 ; X-RAY DIFFRACTION 1.5Å

e4hm4A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: 16N,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.5Å

e4hm5A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: 16N,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.5Å

e4hm6A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: 16Q,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.5Å

e4hm7A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO,FE,SO4,SYN ; X-RAY DIFFRACTION 1.5Å

e4hm8A2[A:155-446] Image Pymol Jmol Links: PDB, SCOP, CATH

Naphthalene 1,2-dioxygenase subunit alpha ; ligands: 16R,EDO,FE,SO4 ; X-RAY DIFFRACTION 1.300Å

e4hm0A2[A:155-448] Image Pymol Jmol Links: PDB, SCOP, CATH

Naphthalene 1,2-dioxygenase subunit alpha ; ligands: EDO,FE,IAC,SO4 ; X-RAY DIFFRACTION 1.800Å

e2yfiC9[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfjC9[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: 1IT,FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfiA9[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfiE9[E:180-468] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfiG9[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfiK6[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfjA9[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: 1IT,FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfjE9[E:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: 1IT,FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfjI9[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfjK6[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfiI6[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yfjG6[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.15Å

e2yflE9[E:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.6Å

e2yflG9[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.6Å

e2yflC6[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: DC4,FE2 ; X-RAY DIFFRACTION 2.6Å

e2yflK9[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.6Å

e2yflI9[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.6Å

e2xsoA6[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xsoM6[M:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xr8K6[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xr8M6[M:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xr8O6[O:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xr8Q6[Q:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xr8W6[W:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xshA6[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: DC5,FE2 ; X-RAY DIFFRACTION 2.29Å

e2xshC6[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: DC5,FE2 ; X-RAY DIFFRACTION 2.29Å

e2xshE6[E:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: DC5,FE2 ; X-RAY DIFFRACTION 2.29Å

e2xshI6[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.29Å

e2xshK6[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.29Å

e2xsoC6[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xsoE6[E:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xsoK6[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xsoO6[O:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xr8C6[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xr8G6[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xr8I6[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xr8S6[S:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xshG6[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.29Å

e2xsoG6[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xsoI6[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xsoU6[U:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xr8U6[U:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e2xsoW6[W:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2xsoS6[S:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

e2yflA6[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: DC4,FE2 ; X-RAY DIFFRACTION 2.6Å

e3n0qA2[A:136-402] Image Pymol Jmol Links: PDB, SCOP, CATH

Putative aromatic-ring hydroxylating dioxygenase ; ligands: CL,GOL,NI,TRS ; X-RAY DIFFRACTION 1.80Å

e3vcaA2[A:156-406] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RING-HYDROXYLATING DIOXYGENASE ; ligands: FE,PRO ; X-RAY DIFFRACTION 1.59Å

e3vcpA2[A:156-406] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RING-HYDROXYLATING DIOXYGENASE ; ligands: FE,PRO ; X-RAY DIFFRACTION 2.2Å

e4qupA2[A:155-405] Image Pymol Jmol Links: PDB, SCOP, CATH

Monoxygenase; demethylase ; ligands: 3BY,FE,TRS ; X-RAY DIFFRACTION 1.70Å

e4qurA2[A:155-405] Image Pymol Jmol Links: PDB, SCOP, CATH

monoxygenase; demethylase ; ligands: 3BY,CYN,FE,OXY,TRS ; X-RAY DIFFRACTION 1.759Å

e5hl4A2[A:155-406] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ring-hydroxylating dioxygenase ; ligands: FE ; X-RAY DIFFRACTION 2.20Å

e5aeuA1[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e5aeuC3[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e5aeuE1[E:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e5aeuG3[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 2.49Å

e5aewA1[A:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewC2[C:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewE1[E:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewG2[G:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewI1[I:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewK2[K:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewM3[M:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewO1[O:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewQ1[Q:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewS2[S:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewU3[U:180-458] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: FE2 ; X-RAY DIFFRACTION 1.87Å

e5aewW1[W:180-459] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; ligands: BNL,FE2 ; X-RAY DIFFRACTION 1.87Å

e5brcA3[A:153-445] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: FE

e5brcD1[D:152-445] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: FE

e5brcG3[G:153-445] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: FE

e5xbpA2[A:153-445] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3NT oxygenase alpha subunit ; ligands: FE ; X-RAY DIFFRACTION 2.9Å

e5xbpD3[D:153-445] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3NT oxygenase alpha subunit ; ligands: FE ; X-RAY DIFFRACTION 2.9Å

e5xbpG2[G:153-445] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3NT oxygenase alpha subunit ; ligands: FE ; X-RAY DIFFRACTION 2.9Å

e6y8jA3[A:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; X-RAY DIFFRACTION 2.050Å

e6y8sA3[A:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: FE,GOL,NM2 ; X-RAY DIFFRACTION 1.629Å

e6y9dA3[A:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dB3[B:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dC3[C:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dD3[D:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dE3[E:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dF3[F:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dG3[G:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dH3[H:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dI3[I:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dJ3[J:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dK3[K:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6y9dL3[L:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: 152,EPE,FE,SCN ; X-RAY DIFFRACTION 1.97Å

e6zgpA3[A:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpB3[B:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpC3[C:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpD3[D:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpE3[E:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpF3[F:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpG3[G:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpH3[H:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpI3[I:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpJ3[J:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpK3[K:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e6zgpL3[L:158-371] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Carnitine monooxygenase oxygenase subunit ; ligands: EPE,FE,QKQ ; X-RAY DIFFRACTION 2.01Å

e7c8zA1[A:174-260,A:283-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Salicylate 5-hydroxylase, large oxygenase component ; ligands: FE ; X-RAY DIFFRACTION 2.600Å

e7c8zC3[C:174-260,C:283-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Salicylate 5-hydroxylase, large oxygenase component ; ligands: FE ; X-RAY DIFFRACTION 2.600Å

e7c8zE3[E:174-260,E:283-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Salicylate 5-hydroxylase, large oxygenase component ; ligands: FE ; X-RAY DIFFRACTION 2.600Å

e7c8zG3[G:174-260,G:283-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Salicylate 5-hydroxylase, large oxygenase component ; ligands: FE ; X-RAY DIFFRACTION 2.600Å

e7q05E3[E:161-426] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 2 ; ligands: SO4,UB7 ; X-RAY DIFFRACTION 2.078Å

e7q06E1[E:160-424] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 2 ; ligands: 8IB,SO4 ; X-RAY DIFFRACTION 1.948Å

e7q04E1[E:161-420] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 2 ; X-RAY DIFFRACTION 2.281Å

e7vjuC3[C:161-413] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Rieske (2Fe-2S) domain protein ; ligands: FE2,PEG,PO4 ; X-RAY DIFFRACTION 2.27Å

e7q04D1[D:160-247,D:268-410] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 2 ; ligands: FE ; X-RAY DIFFRACTION 2.281Å

e7q06D2[D:160-247,D:268-411] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 2 ; ligands: 8IB,FE,SO4 ; X-RAY DIFFRACTION 1.948Å

e7q06F1[F:160-247,F:269-412] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 2 ; ligands: 8IB,FE,SO4 ; X-RAY DIFFRACTION 1.948Å

e7vjuE3[E:160-246,E:269-411] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Rieske (2Fe-2S) domain protein ; ligands: FE2,GOL,PEG,PO4 ; X-RAY DIFFRACTION 2.27Å

e7ylsB2[B:163-437] Image Pymol Jmol Links: PDB, SCOP, CATH

Rieske (2Fe-2S) domain protein ; ligands: ACT,FE,GOL ; X-RAY DIFFRACTION 1.8Å

e1uliA2[A:171-451] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BIPHENYL DIOXYGENASE LARGE SUBUNIT ; ligands: FE2 ; X-RAY DIFFRACTION 2.2Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes