Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
![](/ecod/img/m.gif)
![](/ecod/img/p.gif)
![](/ecod/img/p.gif)
![](/ecod/img/m.gif)
Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
Representatives:
e1jm1A1[A:49-138,A:195-250]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
RIESKE IRON-SULFUR PROTEIN SOXF ; X-RAY DIFFRACTION 1.11Å
e2bmoA1[A:3-77,A:134-152]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
OXYGENASE-ALPHA NBDO ; ligands: EDO,EOH ; X-RAY DIFFRACTION 1.200Å
e1nykA1[A:46-130,A:175-201]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
RIESKE IRON-SULFUR PROTEIN ; X-RAY DIFFRACTION 1.31Å
e1vm9A1[A:2-43,A:86-110]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
Toluene-4-monooxygenase system protein C ; ligands: EDO,MG ; X-RAY DIFFRACTION 1.48Å
e1rieA1[A:70-137,A:180-196]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
RIESKE IRON-SULFUR PROTEIN ; X-RAY DIFFRACTION 1.5Å
e2i7fA4[A:3-43,A:87-104]
* nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
Ferredoxin component of dioxygenase ; ligands: SO4 ; X-RAY DIFFRACTION 1.620Å
e1g8kB1[B:1-58,B:101-133]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
ARSENITE OXIDASE ; X-RAY DIFFRACTION 1.64Å
e5cxmA2[A:35-75,A:114-133]
* nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
Cytochrome b6/f complex iron-sulfur subunit ; X-RAY DIFFRACTION 1.7Å
e3gkeC2[C:2-46,C:97-120]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DdmC ; ligands: EDO ; X-RAY DIFFRACTION 1.75Å
e3gl0C1[C:2-46,C:97-120]
* nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DdmC ; ligands: EDO ; X-RAY DIFFRACTION 1.75Å
e1rfsA1[A:53-105,A:147-179]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
RIESKE PROTEIN ; X-RAY DIFFRACTION 1.83Å
e6ickA3[A:7-60,A:111-136]
* nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
Methylxanthine N1-demethylase NdmA ; X-RAY DIFFRACTION 1.95Å
e2b1xA1[A:1-86,A:144-162]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.0Å
e2de7E1[E:3-44,E:88-109]
* nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
FERREDOXIN COMPONENT OF CARBAZOLE ; X-RAY DIFFRACTION 2.0Å
e2e4pA1[A:2-37,A:82-109]
* nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
BIPHENYL DIOXYGENASE FERREDOXIN SUBUNIT ; ligands: FES,SO4,TRE ; X-RAY DIFFRACTION 2.0Å
e1uliA1[A:17-96,A:152-170]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
BIPHENYL DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.2Å
e1uliC1[C:17-95,C:151-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.2Å
e1uliE1[E:17-95,E:151-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.2Å
e1uljA1[A:17-95,A:151-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.6Å
e1uljC1[C:17-95,C:151-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.6Å
e1uljE1[E:17-95,E:151-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.6Å
e1wqlA1[A:20-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
IRON-SULFUR PROTEIN LARGE SUBUNIT OF CUMENE DIOXYGENASE ; X-RAY DIFFRACTION 2.2Å
e2xr8E1[E:18-97,E:153-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xsoQ1[Q:18-97,Q:153-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2b1xC1[C:1-85,C:143-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 2.0Å
e2b1xE1[E:1-85,E:143-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; ligands: MPD ; X-RAY DIFFRACTION 2.0Å
e2b24A1[A:1-85,A:143-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 3.0Å
e2b24C1[C:1-85,C:143-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 3.0Å
e2b24E1[E:1-85,E:143-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE DIOXYGENASE LARGE SUBUNIT ; X-RAY DIFFRACTION 3.0Å
e2yfiC8[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfjC8[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfiA8[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfiE8[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfiG8[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfiK5[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfjA8[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfjE8[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfjI8[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfjK5[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfiI5[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yfjG5[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.15Å
e2yflE8[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.6Å
e2yflG8[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.6Å
e2yflC4[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.6Å
e2yflK8[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.6Å
e2yflI8[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.6Å
e2xsoA5[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xsoM5[M:18-98,M:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xr8K5[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xr8M5[M:18-98,M:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xr8O5[O:18-98,O:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xr8Q5[Q:18-98,Q:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xr8W5[W:18-98,W:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xshA5[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.29Å
e2xshC5[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.29Å
e2xshE5[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.29Å
e2xshI5[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.29Å
e2xshK5[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.29Å
e2xsoC5[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xsoE5[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xsoK5[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xsoO5[O:18-98,O:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xr8C5[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xr8G5[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xr8I5[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xr8S5[S:18-98,S:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xshG5[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.29Å
e2xsoG5[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xsoI5[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xsoU5[U:18-98,U:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xr8U5[U:18-98,U:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xsoW5[W:18-98,W:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2xsoS5[S:18-98,S:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.2Å
e2yflA5[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.6Å
e2xr8A5[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e2xrxM5[M:18-98,M:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxS5[S:18-98,S:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxA5[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxC5[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxE5[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxG5[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxI5[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxK5[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxO5[O:18-98,O:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxQ5[Q:18-98,Q:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxU5[U:18-98,U:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e2xrxW5[W:18-98,W:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.42Å
e3gzxA5[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Biphenyl dioxygenase subunit alpha ; ligands: GOL ; X-RAY DIFFRACTION 1.580Å
e3gzyA5[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.62Å
e3en1A5[A:15-94,A:150-168] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Benzene 1,2-dioxygenase subunit alpha ; ligands: PE3 ; X-RAY DIFFRACTION 3.200Å
e4hjlA6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO ; X-RAY DIFFRACTION 1.5Å
e4hkvA6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
Naphthalene 1,2-dioxygenase subunit alpha ; ligands: EDO ; X-RAY DIFFRACTION 1.650Å
e4hm1A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO ; X-RAY DIFFRACTION 1.5Å
e4hm2A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
Naphthalene 1,2-dioxygenase subunit alpha ; ligands: EDO ; X-RAY DIFFRACTION 1.260Å
e4hm3A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO ; X-RAY DIFFRACTION 1.5Å
e4hm4A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO ; X-RAY DIFFRACTION 1.5Å
e4hm5A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO ; X-RAY DIFFRACTION 1.5Å
e4hm6A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO ; X-RAY DIFFRACTION 1.5Å
e4hm7A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
NAPHTHALENE 1,2-DIOXYGENASE SUBUNIT ALPHA ; ligands: EDO ; X-RAY DIFFRACTION 1.5Å
e4hm8A6[A:1-79,A:136-154] Image Pymol Jmol Links: PDB, SCOP, CATH
Naphthalene 1,2-dioxygenase subunit alpha ; ligands: EDO ; X-RAY DIFFRACTION 1.300Å
e4hm0A7[A:1-78,A:135-155] Image Pymol Jmol Links: PDB, SCOP, CATH
Naphthalene 1,2-dioxygenase subunit alpha ; ligands: EDO ; X-RAY DIFFRACTION 1.800Å
e1eg9A1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT) ; X-RAY DIFFRACTION 1.6Å
e1ndoA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ; X-RAY DIFFRACTION 2.25Å
e1ndoC1[C:3-78,C:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ; X-RAY DIFFRACTION 2.25Å
e1ndoE1[E:3-78,E:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ; X-RAY DIFFRACTION 2.25Å
e1o7gA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 1.7Å
e1o7hA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 2.2Å
e1o7mA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 1.750Å
e1o7nA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 1.400Å
e1o7pA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 1.95Å
e1o7wA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 1.9Å
e1uuvA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 1.65Å
e1uuwA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; X-RAY DIFFRACTION 2.3Å
e2hmjA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO ; X-RAY DIFFRACTION 1.500Å
e2hmkA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO ; X-RAY DIFFRACTION 1.650Å
e2hmlA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO ; X-RAY DIFFRACTION 1.800Å
e2hmmA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO ; X-RAY DIFFRACTION 1.600Å
e2hmnA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Naphthalene 1,2-dioxygenase alpha subunit ; ligands: EDO ; X-RAY DIFFRACTION 1.700Å
e2hmoA1[A:3-78,A:135-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT ; ligands: EDO ; X-RAY DIFFRACTION 1.6Å
e2bmqA1[A:3-76,A:133-151] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
OXYGENASE-ALPHA NBDO ; ligands: EDO,EOH ; X-RAY DIFFRACTION 1.550Å
e2bmrA1[A:3-76,A:133-151] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
OXYGENASE-ALPHA NBDO ; ligands: EDO,EOH ; X-RAY DIFFRACTION 1.500Å
e4qupA1[A:17-84,A:137-154] Image Pymol Jmol Links: PDB, SCOP, CATH
Monoxygenase; demethylase ; ligands: GOL,TRS ; X-RAY DIFFRACTION 1.70Å
e4qurA1[A:17-84,A:137-154] Image Pymol Jmol Links: PDB, SCOP, CATH
monoxygenase; demethylase ; ligands: TRS ; X-RAY DIFFRACTION 1.759Å
e5hl4A3[A:6-84,A:137-154] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ring-hydroxylating dioxygenase ; ligands: NCO ; X-RAY DIFFRACTION 2.20Å
e5aeuA2[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e5aeuC2[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e5aeuE2[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e5aeuG2[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 2.49Å
e5aewA2[A:18-98,A:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewC3[C:18-98,C:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewE3[E:18-98,E:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewG1[G:18-98,G:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewI2[I:18-98,I:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewK1[K:18-98,K:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewM2[M:18-98,M:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewO2[O:18-98,O:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewQ2[Q:18-98,Q:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewS3[S:18-98,S:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewU1[U:18-98,U:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5aewW3[W:18-98,W:161-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BIPHENYL DIOXYGENASE SUBUNIT ALPHA ; X-RAY DIFFRACTION 1.87Å
e5brcA1[A:2-76,A:133-152] Image Pymol Jmol Links: PDB, SCOP, CATH
e5brcD3[D:2-76,D:133-151] Image Pymol Jmol Links: PDB, SCOP, CATH
e5brcG1[G:2-76,G:133-152] Image Pymol Jmol Links: PDB, SCOP, CATH
e5xbpA3[A:2-76,A:133-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3NT oxygenase alpha subunit ; X-RAY DIFFRACTION 2.9Å
e5xbpD1[D:2-76,D:133-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3NT oxygenase alpha subunit ; X-RAY DIFFRACTION 2.9Å
e5xbpG3[G:2-76,G:133-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3NT oxygenase alpha subunit ; X-RAY DIFFRACTION 2.9Å
e7c8zA2[A:30-89,A:155-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Salicylate 5-hydroxylase, large oxygenase component ; X-RAY DIFFRACTION 2.600Å
e7c8zC2[C:30-89,C:155-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Salicylate 5-hydroxylase, large oxygenase component ; X-RAY DIFFRACTION 2.600Å
e7c8zE1[E:30-89,E:155-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Salicylate 5-hydroxylase, large oxygenase component ; X-RAY DIFFRACTION 2.600Å
e7c8zG1[G:30-89,G:155-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Salicylate 5-hydroxylase, large oxygenase component ; X-RAY DIFFRACTION 2.600Å
e4emjB1[B:0-36,B:80-106]
* nonrep
Image
Pymol
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CATH, PubMed,
DOI
Toluene 1,2-dioxygenase system ferredoxin subunit ; X-RAY DIFFRACTION 2.4Å
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes