Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
Representatives:
e1f74A1[A:1-293] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL-NEURAMINATE LYASE ; ligands: GOL,NAY ; X-RAY DIFFRACTION 1.6Å
e1o5kA1[A:0-294] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH
4-hydroxy-tetrahydrodipicolinate synthase ; ligands: CA ; X-RAY DIFFRACTION 1.61Å
e1w3iA1[A:2-294] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,PYR ; X-RAY DIFFRACTION 1.700Å
e1hl2A1[A:3-297] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE SUBUNIT ; ligands: 3PY ; X-RAY DIFFRACTION 1.8Å
e8u8wA1[A:0-296] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,GOL,IOD,NA,PYR ; X-RAY DIFFRACTION 1.80Å
e8u90A1[A:1-296] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,GOL,IOD,NA ; X-RAY DIFFRACTION 1.85Å
e8u91F1[F:0-296] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,MPD ; X-RAY DIFFRACTION 2.65Å
e8u93A1[A:1-296] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: 1PG,CL,DTT,PEG ; X-RAY DIFFRACTION 1.90Å
e8ur1A1[A:1-296] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: 1PE,CL,GOL,NA,NO3,SO4 ; X-RAY DIFFRACTION 2.10Å
e8u91D1[D:0-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,MPD ; X-RAY DIFFRACTION 2.65Å
e8u92B1[B:-1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,GOL,MPD,NA ; X-RAY DIFFRACTION 2.10Å
e8u92C1[C:-1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,GOL,MPD,NA ; X-RAY DIFFRACTION 2.10Å
e8u92D1[D:-1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,GOL,MPD,NA ; X-RAY DIFFRACTION 2.10Å
e8u92E1[E:-1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,GOL,MPD,NA ; X-RAY DIFFRACTION 2.10Å
e8u92F1[F:-1-296] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,MPD,NA ; X-RAY DIFFRACTION 2.10Å
e8u91A1[A:1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,MPD ; X-RAY DIFFRACTION 2.65Å
e8u91B1[B:1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,MPD ; X-RAY DIFFRACTION 2.65Å
e8u91C1[C:1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,MPD ; X-RAY DIFFRACTION 2.65Å
e8u91E1[E:1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,MPD ; X-RAY DIFFRACTION 2.65Å
e5j5dA1[A:4-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
4-hydroxy-tetrahydrodipicolinate synthase ; ligands: 6GT,NA ; X-RAY DIFFRACTION 2.400Å
e1hl2B1[B:3-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE SUBUNIT ; ligands: 3PY ; X-RAY DIFFRACTION 1.8Å
e1hl2D1[D:3-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE SUBUNIT ; ligands: 3PY ; X-RAY DIFFRACTION 1.8Å
e1nal11[1:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: SO4 ; X-RAY DIFFRACTION
e1fdzB1[B:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: PYR ; X-RAY DIFFRACTION 2.6Å
e1nal21[2:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: SO4 ; X-RAY DIFFRACTION
e1nal31[3:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: SO4 ; X-RAY DIFFRACTION
e1nal41[4:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: SO4 ; X-RAY DIFFRACTION
e1fdyD1[D:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: 3PY ; X-RAY DIFFRACTION 2.45Å
e1fdzA1[A:4-295] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: PYR ; X-RAY DIFFRACTION 2.6Å
e1fdyB1[B:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: 3PY ; X-RAY DIFFRACTION 2.45Å
e1fdyA1[A:4-295] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: 3PY ; X-RAY DIFFRACTION 2.45Å
e1fdyC1[C:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: 3PY ; X-RAY DIFFRACTION 2.45Å
e1hl2C1[C:3-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE SUBUNIT ; ligands: 3PY ; X-RAY DIFFRACTION 1.8Å
e1fdzC1[C:4-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: PYR ; X-RAY DIFFRACTION 2.6Å
e1fdzD1[D:4-295] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: PYR ; X-RAY DIFFRACTION 2.6Å
e1f5zA1[A:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; X-RAY DIFFRACTION 1.88Å
e1f5zB1[B:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; X-RAY DIFFRACTION 1.88Å
e1f7bA1[A:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL-NEURAMINATE LYASE ; ligands: NAU ; X-RAY DIFFRACTION 1.8Å
e1f6pB1[B:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; X-RAY DIFFRACTION 2.25Å
e1f73C1[C:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; ligands: GOL,HMN ; X-RAY DIFFRACTION 1.95Å
e1f73A1[A:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; ligands: HMN ; X-RAY DIFFRACTION 1.95Å
e1f5zC1[C:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; X-RAY DIFFRACTION 1.88Å
e1f73D1[D:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; ligands: HMN ; X-RAY DIFFRACTION 1.95Å
e1f6pA1[A:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; X-RAY DIFFRACTION 2.25Å
e1f5zD1[D:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; X-RAY DIFFRACTION 1.88Å
e1f6kC1[C:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: GOL,SO4 ; X-RAY DIFFRACTION 1.60Å
e1f6kA1[A:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: GOL,SO4 ; X-RAY DIFFRACTION 1.60Å
e1f6pD1[D:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; X-RAY DIFFRACTION 2.25Å
e1f74C1[C:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL-NEURAMINATE LYASE ; ligands: CL,GOL,NAY ; X-RAY DIFFRACTION 1.6Å
e1f6pC1[C:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; X-RAY DIFFRACTION 2.25Å
e1f7bC1[C:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL-NEURAMINATE LYASE ; ligands: CL,NAV ; X-RAY DIFFRACTION 1.8Å
e1f73B1[B:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYL NEURAMINATE LYASE ; ligands: GOL,HMN ; X-RAY DIFFRACTION 1.95Å
e2a6lB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: K ; X-RAY DIFFRACTION 2.05Å
e1dhpB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: K ; X-RAY DIFFRACTION 2.3Å
e2atsA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH
dihydrodipicolinate synthase ; ligands: CL,DLY,K ; X-RAY DIFFRACTION 1.9Å
e1s5wB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 2.32Å
e2a6nB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: K ; X-RAY DIFFRACTION 1.8Å
e1s5vA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 2.35Å
e1dhpA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: K ; X-RAY DIFFRACTION 2.3Å
e1o5kB1[B:0-294] Image Pymol Jmol Links: PDB, SCOP, CATH
4-hydroxy-tetrahydrodipicolinate synthase ; X-RAY DIFFRACTION 1.61Å
e1s5tA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 2.3Å
e1yxdA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
dihydrodipicolinate synthase ; ligands: CL,K,LYS ; X-RAY DIFFRACTION 2.0Å
e2a6lA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: K ; X-RAY DIFFRACTION 2.05Å
e1yxcB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
dihydrodipicolinate synthase ; ligands: CL,K ; X-RAY DIFFRACTION 1.9Å
e2a6nA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: K ; X-RAY DIFFRACTION 1.8Å
e1yxcA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
dihydrodipicolinate synthase ; ligands: CL,K ; X-RAY DIFFRACTION 1.9Å
e1yxdB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
dihydrodipicolinate synthase ; ligands: CL,K,LYS ; X-RAY DIFFRACTION 2.0Å
e2atsB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH
dihydrodipicolinate synthase ; ligands: CL,DLY,K ; X-RAY DIFFRACTION 1.9Å
e1s5tB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 2.3Å
e1s5vB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 2.35Å
e1s5wA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 2.32Å
e1xxxG1[G:6-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,DTT,MG ; X-RAY DIFFRACTION 2.28Å
e1xxxE1[E:6-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,DTT,MG ; X-RAY DIFFRACTION 2.28Å
e1xxxF1[F:5-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,DTT,MG ; X-RAY DIFFRACTION 2.28Å
e1xxxH1[H:5-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,DTT,MG ; X-RAY DIFFRACTION 2.28Å
e1xxxB1[B:6-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,DTT,MG ; X-RAY DIFFRACTION 2.28Å
e1xxxC1[C:5-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,DTT,MG ; X-RAY DIFFRACTION 2.28Å
e1xxxD1[D:6-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,DTT,MG ; X-RAY DIFFRACTION 2.28Å
e1xl9C1[C:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.23Å
e1xl9D1[D:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.23Å
e1xkyB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: K ; X-RAY DIFFRACTION 1.94Å
e1xl9B1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.23Å
e1xkyC1[C:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: K ; X-RAY DIFFRACTION 1.94Å
e1xkyD1[D:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: K ; X-RAY DIFFRACTION 1.94Å
e1xl9A1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.23Å
e1w37A1[A:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL ; X-RAY DIFFRACTION 2.000Å
e1w37C1[C:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL ; X-RAY DIFFRACTION 2.000Å
e1w3nA1[A:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,SSH ; X-RAY DIFFRACTION 2.100Å
e1w3nB1[B:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,SSH ; X-RAY DIFFRACTION 2.100Å
e1w37B1[B:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL ; X-RAY DIFFRACTION 2.000Å
e1w3tA1[A:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: 3GR,GOL,PYR,RSH ; X-RAY DIFFRACTION 2.100Å
e1w3tD1[D:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: 3GR,GOL,PYR,RSH ; X-RAY DIFFRACTION 2.100Å
e1w3iD1[D:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,PYR ; X-RAY DIFFRACTION 1.700Å
e1w37D1[D:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,NA ; X-RAY DIFFRACTION 2.000Å
e1w3tB1[B:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: 3GR,GOL,PYR,RSH ; X-RAY DIFFRACTION 2.100Å
e1w3iC1[C:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,PYR ; X-RAY DIFFRACTION 1.700Å
e1w3nD1[D:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,SSH ; X-RAY DIFFRACTION 2.100Å
e1w3iB1[B:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,PYR ; X-RAY DIFFRACTION 1.700Å
e1w3nC1[C:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: GOL,SSH ; X-RAY DIFFRACTION 2.100Å
e1w3tC1[C:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: 3GR,GOL,PYR,RSH ; X-RAY DIFFRACTION 2.100Å
e3na8A1[A:23-313] Image Pymol Jmol Links: PDB, SCOP, CATH
PUTATIVE DIHYDRODIPICOLINATE SYNTHETASE ; ligands: MG,MLT ; X-RAY DIFFRACTION 1.85Å
e3lerA1[A:1-298] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: EDO ; X-RAY DIFFRACTION 1.84Å
e3a5fA1[A:2-292] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL ; X-RAY DIFFRACTION 1.19Å
e3n2xA1[A:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized protein yagE ; ligands: EDO ; X-RAY DIFFRACTION 2.200Å
e3pb0A1[A:-5-294] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: SO4 ; X-RAY DIFFRACTION 2Å
e3fluA1[A:-2-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,SO4 ; X-RAY DIFFRACTION 1.999Å
e3h5dA1[A:1-298] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e3i7qA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,K,PO4 ; X-RAY DIFFRACTION 1.99Å
e3noeA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: PGO ; X-RAY DIFFRACTION 2.95Å
e3pudA1[A:1-291] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,SO4 ; X-RAY DIFFRACTION 2.8Å
e3si9A1[A:4-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: EDO ; X-RAY DIFFRACTION 2.100Å
e3takA1[A:1-291] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,PYR ; X-RAY DIFFRACTION 1.42Å
e3qfeA1[A:1-314] Image Pymol Jmol Links: PDB, SCOP, CATH
PUTATIVE DIHYDRODIPICOLINATE SYNTHASE FAMILY PROTEIN ; ligands: CA,CL ; X-RAY DIFFRACTION 2.35Å
e3fkkA1[A:17-320] Image Pymol Jmol Links: PDB, SCOP, CATH
L-2-keto-3-deoxyarabonate dehydratase ; ligands: PO4 ; X-RAY DIFFRACTION 2.00Å
e3l21A1[A:4-300] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: ACT,BME,GOL,SO4 ; X-RAY DIFFRACTION 2.00Å
e3hijA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,NA ; X-RAY DIFFRACTION 2.15Å
e3s5oA1[A:32-327] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
4-HYDROXY-2-OXOGLUTARATE ALDOLASE, MITOCHONDRIAL ; ligands: EDO,K ; X-RAY DIFFRACTION 1.97Å
e2ygyA1[A:-1-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; ligands: CL ; X-RAY DIFFRACTION 1.900Å
e4dxvA1[A:1-291] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,GOL,MG ; X-RAY DIFFRACTION 1.8Å
e4eouA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,K ; X-RAY DIFFRACTION 2.3Å
e2ydaA1[A:1-293] Image Pymol Jmol Links: PDB, SCOP, CATH
2-KETO-3-DEOXY GLUCONATE ALDOLASE ; ligands: EPE,GOL,IPA ; X-RAY DIFFRACTION 1.91Å
e3qzeA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: CL ; X-RAY DIFFRACTION 1.59Å
e2hmcA1[A:-3-310] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: MG ; X-RAY DIFFRACTION 1.9Å
e3eb2A1[A:4-291] Image Pymol Jmol Links: PDB, SCOP, CATH
Putative dihydrodipicolinate synthetase ; ligands: PGE ; X-RAY DIFFRACTION 2.04Å
e2ehhA1[A:1-294] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: PO4 ; X-RAY DIFFRACTION 1.9Å
e2rfgA1[A:1-289] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: EOH,MG ; X-RAY DIFFRACTION 1.5Å
e2vc6A1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 1.95Å
e3di0A1[A:2-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL ; X-RAY DIFFRACTION 2.38Å
e3g0sA1[A:-2-292] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: CL,GOL ; X-RAY DIFFRACTION 1.85Å
e3dz1A1[A:-2-300] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 1.87Å
e3b4uA1[A:4-290] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: MG ; X-RAY DIFFRACTION 1.2Å
e3cprA1[A:3-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthetase ; X-RAY DIFFRACTION 2.170Å
e2r8wA1[A:30-326] Image Pymol Jmol Links: PDB, SCOP, CATH
AGR_C_1641P ; ligands: ACT,CL ; X-RAY DIFFRACTION 1.8Å
e2v8zA1[A:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.2Å
e3d0cA1[A:1-302] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 1.90Å
e2r91A1[A:21-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: SO4 ; X-RAY DIFFRACTION 2.0Å
e2nuwA1[A:1-288] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase ; ligands: MG ; X-RAY DIFFRACTION 1.800Å
e3e96A1[A:7-302] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 1.8Å
e2pcqA1[A:1-283] Image Pymol Jmol Links: PDB, SCOP, CATH
PUTATIVE DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,K ; X-RAY DIFFRACTION 2.1Å
e4amaC1[C:-4-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
N-ACETYLNEURAMINATE LYASE ; X-RAY DIFFRACTION 2.35Å
e2ojpA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL ; X-RAY DIFFRACTION 1.700Å
e2ojpB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL ; X-RAY DIFFRACTION 1.700Å
e2purA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,K,PO4 ; X-RAY DIFFRACTION 1.7Å
e2purB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,K,PO4 ; X-RAY DIFFRACTION 1.7Å
e3c0jA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,K ; X-RAY DIFFRACTION 2.40Å
e3c0jB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,K,PO4 ; X-RAY DIFFRACTION 2.40Å
e3du0A1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: CL,GOL,K ; X-RAY DIFFRACTION 2.00Å
e3du0B1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: CL,GOL,K ; X-RAY DIFFRACTION 2.00Å
e3denA1[A:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,K,PO4 ; X-RAY DIFFRACTION 2.00Å
e3denB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthase ; ligands: GOL,K,PO4 ; X-RAY DIFFRACTION 2.00Å
e3eb2B1[B:3-293] Image Pymol Jmol Links: PDB, SCOP, CATH
Putative dihydrodipicolinate synthetase ; ligands: PGE ; X-RAY DIFFRACTION 2.04Å
e3eb2C1[C:4-291] Image Pymol Jmol Links: PDB, SCOP, CATH
Putative dihydrodipicolinate synthetase ; ligands: PGE ; X-RAY DIFFRACTION 2.04Å
e3eb2D1[D:4-293] Image Pymol Jmol Links: PDB, SCOP, CATH
Putative dihydrodipicolinate synthetase ; ligands: PGE ; X-RAY DIFFRACTION 2.04Å
e2ehhC1[C:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: PO4 ; X-RAY DIFFRACTION 1.9Å
e2ehhD1[D:2-294] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: PO4 ; X-RAY DIFFRACTION 1.9Å
e2ehhE1[E:1-294] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: PO4 ; X-RAY DIFFRACTION 1.9Å
e2yxgA1[A:1-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.2Å
e2yxgB1[B:2-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.2Å
e2yxgC1[C:2-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.2Å
e2yxgD1[D:2-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 2.2Å
e2rfgB1[B:1-297] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 1.5Å
e2rfgC1[C:1-289] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 1.5Å
e2rfgD1[D:1-289] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 1.5Å
e2vc6B1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; X-RAY DIFFRACTION 1.95Å
e3daqA1[A:2-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,GOL ; X-RAY DIFFRACTION 1.45Å
e3daqB1[B:2-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,GOL ; X-RAY DIFFRACTION 1.45Å
e3daqC1[C:2-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,GOL ; X-RAY DIFFRACTION 1.45Å
e3daqD1[D:2-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,GOL ; X-RAY DIFFRACTION 1.45Å
e3di0B1[B:2-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL ; X-RAY DIFFRACTION 2.38Å
e3di1A1[A:2-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: PYR ; X-RAY DIFFRACTION 2.2Å
e3di1B1[B:1-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: PYR ; X-RAY DIFFRACTION 2.2Å
e3g0sB1[B:-1-292] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: CL,GOL ; X-RAY DIFFRACTION 1.85Å
e3b4uB1[B:3-290] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: MG ; X-RAY DIFFRACTION 1.2Å
e3cprB1[B:3-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Dihydrodipicolinate synthetase ; X-RAY DIFFRACTION 2.170Å
e2r8wB1[B:28-326] Image Pymol Jmol Links: PDB, SCOP, CATH
AGR_C_1641P ; ligands: ACT ; X-RAY DIFFRACTION 1.8Å
e2v8zB1[B:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.2Å
e2v8zC1[C:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.2Å
e2v8zD1[D:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.2Å
e2v9dA1[A:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.15Å
e2v9dB1[B:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.15Å
e2v9dC1[C:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.15Å
e2v9dD1[D:12-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YAGE ; X-RAY DIFFRACTION 2.15Å
e3d0cB1[B:2-301] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 1.90Å
e2r91D1[D:21-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: SO4 ; X-RAY DIFFRACTION 2.0Å
e2r91B1[B:21-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: SO4 ; X-RAY DIFFRACTION 2.0Å
e2r91C1[C:21-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: SO4 ; X-RAY DIFFRACTION 2.0Å
e2r94A1[A:21-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: PYR ; X-RAY DIFFRACTION 2.2Å
e2r94D1[D:21-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: PYR ; X-RAY DIFFRACTION 2.2Å
e2r94B1[B:21-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: PYR ; X-RAY DIFFRACTION 2.2Å
e2r94C1[C:21-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-Keto-3-deoxy-(6-phospho-)gluconate aldolase ; ligands: PYR ; X-RAY DIFFRACTION 2.2Å
e2nuwB1[B:1-288] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase ; X-RAY DIFFRACTION 1.800Å
e2nuxA1[A:1-288] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase ; ligands: MG ; X-RAY DIFFRACTION 2.500Å
e2nuxB1[B:1-288] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase ; X-RAY DIFFRACTION 2.500Å
e2nuyA1[A:1-288] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase ; ligands: MG,PYR ; X-RAY DIFFRACTION 2.500Å
e2nuyB1[B:1-288] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase ; ligands: PYR ; X-RAY DIFFRACTION 2.500Å
e3e96B1[B:8-307] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; X-RAY DIFFRACTION 1.8Å
e3hijB1[B:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,NA ; X-RAY DIFFRACTION 2.15Å
e3hijC1[C:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,NA ; X-RAY DIFFRACTION 2.15Å
e3hijD1[D:1-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DIHYDRODIPICOLINATE SYNTHASE ; ligands: GOL,NA ; X-RAY DIFFRACTION 2.15Å
e3lerB1[B:1-298] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: EDO,FMT,PEG ; X-RAY DIFFRACTION 1.84Å
e3lerC1[C:3-298] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: EDO,FMT ; X-RAY DIFFRACTION 1.84Å
e3lerD1[D:1-298] Image Pymol Jmol Links: PDB, SCOP, CATH
Dihydrodipicolinate synthase ; ligands: ACY ; X-RAY DIFFRACTION 1.84Å
e3m5vA1[A:1-298] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,SO4 ; X-RAY DIFFRACTION 1.8Å
e3m5vB1[B:-1-298] Image Pymol Jmol Links: PDB, SCOP, CATH
DIHYDRODIPICOLINATE SYNTHASE ; ligands: CL,FMT,PEG,SO4 ; X-RAY DIFFRACTION 1.8Å
NextPseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes