Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices




Representatives:
e1zoqC1[C:2065-2111]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.36Å
e1zoqD1[D:2065-2111] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.36Å
e1jjsA1[A:5-50] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-BINDING PROTEIN ; SOLUTION NMR
e2c52A1[A:9-55] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-BINDING PROTEIN ; SOLUTION NMR
e2kkjA1[A:1-59] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; SOLUTION NMR
e2l14A1[A:2059-2117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-BINDING PROTEIN ; SOLUTION NMR
e1kbhB1[B:48-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-BINDING PROTEIN ; SOLUTION NMR
e5jemC1[C:2065-2106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.50Å
e5jemD1[D:2065-2106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.50Å
e5jemF1[F:2065-2106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.50Å
e5jemH1[H:2065-2106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.50Å
e6es5B1[B:2060-2109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NCBD ; SOLUTION NMR
e6es6B1[B:2060-2109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NCBD ; SOLUTION NMR
e6es7B1[B:2060-2109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; SOLUTION NMR
e7jflC1[C:2069-2104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 1.68Å
e7jflD1[D:2066-2103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 1.68Å
e7jfmC1[C:2066-2104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.23Å
e7jfmD1[D:2067-2106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
CREB-binding protein ; X-RAY DIFFRACTION 2.23Å
e6sqcA2[A:2064-2112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Maltose/maltodextrin-binding periplasmic protein,CREB-binding protein ; ligands: ZN ; X-RAY DIFFRACTION 2.28Å
e7osrA1[A:2060-2109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Nuclear co-activator binding domain ; SOLUTION NMR
e7oswA1[A:2060-2109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
NCBD ; SOLUTION NMR
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes