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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

X: Chaperone J-domain
H: Chaperone J-domain
T: Chaperone J-domain
F: DnaJ

PF00226 CL0392

Representatives:

e3apoA1[A:36-99] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNAJ HOMOLOG SUBFAMILY C MEMBER 10 ; X-RAY DIFFRACTION 2.4Å

e1nz6A1[A:1-98] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AUXILIN ; X-RAY DIFFRACTION 2.5Å

e1n4cA1[A:72-182] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Auxilin ; SOLUTION NMR

e1wjzA1[A:1-94] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

1700030A21Rik protein ; SOLUTION NMR

e1xblA1[A:2-76] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNAJ ; SOLUTION NMR

e3bvoA4[A:67-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Co-chaperone protein HscB, mitochondrial precursor ; ligands: SO4 ; X-RAY DIFFRACTION 3.000Å

e3bvoB2[B:67-146] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Co-chaperone protein HscB, mitochondrial precursor ; X-RAY DIFFRACTION 3.000Å

e1bqzA1[A:1-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

DNAJ ; SOLUTION NMR

e1bq0A1[A:1-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

DNAJ ; SOLUTION NMR

e1hdjA1[A:0-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HUMAN HSP40 ; SOLUTION NMR

e2kqxA1[A:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Curved DNA-binding protein ; SOLUTION NMR

e2lo1A1[A:1-71] Image Pymol Jmol Links: PDB, SCOP, CATH

DnaJ homolog subfamily A member 1 ; SOLUTION NMR

e2o37A1[A:1-81] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2ctrA1[A:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH

DnaJ homolog subfamily B member 9 ; SOLUTION NMR

e2dmxA1[A:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH

DnaJ homolog subfamily B member 8 ; SOLUTION NMR

e2dn9A1[A:1-79] Image Pymol Jmol Links: PDB, SCOP, CATH

DnaJ homolog subfamily A member 3 ; SOLUTION NMR

e2ctwA1[A:1-109] Image Pymol Jmol Links: PDB, SCOP, CATH

DnaJ homolog subfamily C member 5 ; SOLUTION NMR

e2ctpA1[A:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH

DnaJ homolog subfamily B member 12 ; SOLUTION NMR

e2ej7A1[A:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH

HCG3 gene ; SOLUTION NMR

e2cugA1[A:1-88] Image Pymol Jmol Links: PDB, SCOP, CATH

mKIAA0962 protein ; SOLUTION NMR

e2ochA1[A:3-68] Image Pymol Jmol Links: PDB, SCOP, CATH

HYPOTHETICAL PROTEIN DNJ-12 ; X-RAY DIFFRACTION 1.86Å

e3apqA2[A:33-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNAJ HOMOLOG SUBFAMILY C MEMBER 10 ; X-RAY DIFFRACTION 1.84Å

e3apqB2[B:33-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNAJ HOMOLOG SUBFAMILY C MEMBER 10 ; X-RAY DIFFRACTION 1.84Å

e2ctqA1[A:1-85] Image Pymol Jmol Links: PDB, SCOP, CATH

DnaJ homolog subfamily C member 12 ; SOLUTION NMR

e2yuaA1[A:1-99] Image Pymol Jmol Links: PDB, SCOP, CATH

Williams-Beuren syndrome chromosome region 18 protein ; SOLUTION NMR

e2ys8A1[A:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH

Rab-related GTP-binding protein RabJ ; SOLUTION NMR

e3ucsC1[C:0-73] Image Pymol Jmol Links: PDB, SCOP, CATH

Curved DNA-binding protein ; X-RAY DIFFRACTION 1.870Å

e3ucsD1[D:3-71] Image Pymol Jmol Links: PDB, SCOP, CATH

Curved DNA-binding protein ; X-RAY DIFFRACTION 1.870Å

e4j7zA1[A:2-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Chaperone protein DnaJ 2 ; EPR 1.640Å

e4j7zB1[B:2-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Chaperone protein DnaJ 2 ; ligands: GOL ; EPR 1.640Å

e4j7zC1[C:2-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Chaperone protein DnaJ 2 ; ligands: GOL ; EPR 1.640Å

e4j7zD1[D:2-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Chaperone protein DnaJ 2 ; EPR 1.640Å

e4j7zE1[E:4-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Chaperone protein DnaJ 2 ; ligands: GOL ; EPR 1.640Å

e4j7zF1[F:2-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Chaperone protein DnaJ 2 ; ligands: GOL ; EPR 1.640Å

e4j80A1[A:2-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CHAPERONE PROTEIN DNAJ 2 ; X-RAY DIFFRACTION; EPR 2.9Å

e4j80B1[B:2-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CHAPERONE PROTEIN DNAJ 2 ; X-RAY DIFFRACTION; EPR 2.9Å

e4j80C1[C:2-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CHAPERONE PROTEIN DNAJ 2 ; X-RAY DIFFRACTION; EPR 2.9Å

e4j80D1[D:2-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CHAPERONE PROTEIN DNAJ 2 ; X-RAY DIFFRACTION; EPR 2.9Å

e2lgwA2[A:1-71] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DnaJ homolog subfamily B member 2 ; SOLUTION NMR

e4rwuA1[A:1-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein SIS1 ; X-RAY DIFFRACTION 1.250Å

e2n04A1[A:-4-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DnaJ homolog subfamily C member 5 ; SOLUTION NMR

e2n05A1[A:-4-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DnaJ homolog subfamily C member 5 ; SOLUTION NMR

e5nroB1[B:3-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Chaperone protein DnaJ ; X-RAY DIFFRACTION 3.25Å

e6rzyA1[A:1-70] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Heat shock protein 40, type II ; X-RAY DIFFRACTION 1.379Å

e6rzyB1[B:1-70] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Heat shock protein 40, type II ; X-RAY DIFFRACTION 1.379Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes