Home Help

X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

Keyword search

Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: Iron_transport

PF10634 CL0159

Representatives:

e3lzlA1[A:2-158] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 1.45Å

contains an N-terminal additional strand

e3nrpA1[A:2-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PERIPLASMIC PROTEIN-PROBABLY INVOLVED IN HIGH-AFFINITY FE2+ TRANSPORT ; X-RAY DIFFRACTION 1.6Å

e3pjlA1[A:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH

34 kDa membrane antigen ; ligands: CO,EDO,SO4 ; X-RAY DIFFRACTION 1.7Å

e2o6cA1[A:28-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,EDO ; X-RAY DIFFRACTION 1.7Å

e2o6cB1[B:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,SO4 ; X-RAY DIFFRACTION 1.7Å

e2o6dB1[B:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,SO4,ZN ; X-RAY DIFFRACTION 1.86Å

e2o6eB1[B:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,SO4,ZN ; X-RAY DIFFRACTION 1.87Å

e2o6fA1[A:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,EDO,SO4 ; X-RAY DIFFRACTION 1.63Å

e2o6fB1[B:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,SO4 ; X-RAY DIFFRACTION 1.63Å

e2o6dA1[A:28-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,EDO,SO4,ZN ; X-RAY DIFFRACTION 1.86Å

e2o6eA1[A:28-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

34 kDa membrane antigen ; ligands: CL,EDO,SO4,ZN ; X-RAY DIFFRACTION 1.87Å

e3lzlB1[B:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU ; X-RAY DIFFRACTION 1.45Å

e3lznA1[A:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.59Å

e3lznB1[B:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.59Å

e3lzoA1[A:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 1.65Å

e3lzoB1[B:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 1.65Å

e3lzpA1[A:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 1.65Å

e3lzpB1[B:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 1.65Å

e3lzqA1[A:2-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,MN,SO4 ; X-RAY DIFFRACTION 1.41Å

e3lzqB1[B:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,MN,SO4 ; X-RAY DIFFRACTION 1.41Å

e3lzrA1[A:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,MN,SO4 ; X-RAY DIFFRACTION 2.73Å

e3lzrB1[B:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 protein ; ligands: CU,MN,SO4 ; X-RAY DIFFRACTION 2.73Å

e3nrpB1[B:2-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PERIPLASMIC PROTEIN-PROBABLY INVOLVED IN HIGH-AFFINITY FE2+ TRANSPORT ; X-RAY DIFFRACTION 1.6Å

e3nrpC1[C:2-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PERIPLASMIC PROTEIN-PROBABLY INVOLVED IN HIGH-AFFINITY FE2+ TRANSPORT ; X-RAY DIFFRACTION 1.6Å

e3nrpD1[D:2-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PERIPLASMIC PROTEIN-PROBABLY INVOLVED IN HIGH-AFFINITY FE2+ TRANSPORT ; X-RAY DIFFRACTION 1.6Å

e3nrqA1[A:4-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PERIPLASMIC PROTEIN-PROBABLY INVOLVED IN HIGH-AFFINITY FE2+ TRANSPORT ; ligands: CU ; X-RAY DIFFRACTION 1.7Å

e3nrqB1[B:4-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PERIPLASMIC PROTEIN-PROBABLY INVOLVED IN HIGH-AFFINITY FE2+ TRANSPORT ; ligands: CU ; X-RAY DIFFRACTION 1.7Å

e3pjlB1[B:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH

34 kDa membrane antigen ; ligands: CO,EDO,SO4 ; X-RAY DIFFRACTION 1.7Å

e3pjnB1[B:29-185] Image Pymol Jmol Links: PDB, SCOP, CATH

34 kDa membrane antigen ; ligands: ZN ; X-RAY DIFFRACTION 1.7Å

e3pjnA1[A:28-185] Image Pymol Jmol Links: PDB, SCOP, CATH

34 kDa membrane antigen ; ligands: EDO,SO4,ZN ; X-RAY DIFFRACTION 1.7Å

e4nwnB1[B:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnD1[D:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnF1[F:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnH1[H:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnJ1[J:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnL1[L:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnN1[N:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnP1[P:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnR1[R:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnT1[T:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnV1[V:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e4nwnX1[X:2-158] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

PROPANEDIOL UTILIZATION: POLYHEDRAL BODIES PDUT ; X-RAY DIFFRACTION 4.5Å

e5i0vB1[B:2-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein P19 ; ligands: CL,CU,FE ; X-RAY DIFFRACTION 1.650Å

e5i0wB1[B:2-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 ; ligands: CL,CU1,FE2,TAM ; X-RAY DIFFRACTION 1.550Å

e5i0vA1[A:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein P19 ; ligands: CL,CU,FE ; X-RAY DIFFRACTION 1.650Å

e5i0wA1[A:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

P19 ; ligands: CL,CU1,TAM ; X-RAY DIFFRACTION 1.550Å

e5i0xA1[A:1-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Periplasmic protein-probably involved in high-affinity Fe2+ transport ; ligands: CU ; X-RAY DIFFRACTION 1.500Å

e5i0xB1[B:3-160] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Periplasmic protein-probably involved in high-affinity Fe2+ transport ; ligands: CU ; X-RAY DIFFRACTION 1.500Å

e5i0yA1[A:3-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Periplasmic protein-probably involved in high-affinity Fe2+ transport ; ligands: CU ; X-RAY DIFFRACTION 1.400Å

e5i0yB1[B:3-160] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Periplasmic protein-probably involved in high-affinity Fe2+ transport ; ligands: CU ; X-RAY DIFFRACTION 1.400Å

e6wedA1[A:2-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 1.900Å

e6wedB1[B:2-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU ; X-RAY DIFFRACTION 1.900Å

e6weeA1[A:2-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL ; X-RAY DIFFRACTION 2.300Å

e6weeC1[C:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL ; X-RAY DIFFRACTION 2.300Å

e6weeB1[B:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL ; X-RAY DIFFRACTION 2.300Å

e6weeD1[D:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL,SO4 ; X-RAY DIFFRACTION 2.300Å

e6weeE1[E:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL,TRS ; X-RAY DIFFRACTION 2.300Å

e6weeF1[F:3-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL ; X-RAY DIFFRACTION 2.300Å

e6wefC1[C:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefD1[D:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefA1[A:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefB1[B:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefE1[E:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefF1[F:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefG1[G:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefH1[H:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL ; X-RAY DIFFRACTION 2.500Å

e6wefI1[I:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefJ1[J:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,SO4 ; X-RAY DIFFRACTION 2.500Å

e6wefK1[K:2-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL ; X-RAY DIFFRACTION 2.500Å

e6wefL1[L:1-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ligands: CU,GOL,SO4 ; X-RAY DIFFRACTION 2.500Å

e7r5eA1[A:2-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: CU,MG ; X-RAY DIFFRACTION 2.2Å

e7r5pF1[F:1-155] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,MG ; X-RAY DIFFRACTION 1.68Å

e7r3pA1[A:1-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: GOL,PEG,SO4 ; X-RAY DIFFRACTION 1.4Å

e7r3pB1[B:1-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: SO4 ; X-RAY DIFFRACTION 1.4Å

e7r3sA1[A:0-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: GOL,NA,NI,SO4 ; X-RAY DIFFRACTION 1.79Å

e7r3sB1[B:0-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: NA,NI,SO4 ; X-RAY DIFFRACTION 1.79Å

e7r4uA1[A:0-155] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: GOL,NA,SO4 ; X-RAY DIFFRACTION 1.23Å

e7r4uB1[B:0-162] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: NA,SO4 ; X-RAY DIFFRACTION 1.23Å

e7r4vB1[B:1-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: CU1 ; X-RAY DIFFRACTION 1.30Å

e7r4zA1[A:1-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,FE ; X-RAY DIFFRACTION 2.75Å

e7r4zB1[B:1-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,FE ; X-RAY DIFFRACTION 2.75Å

e7r5eB1[B:0-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: CU,MG,PEG ; X-RAY DIFFRACTION 2.2Å

e7r5gA1[A:0-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: CU,MG,PEG ; X-RAY DIFFRACTION 2.2Å

e7r5pA1[A:1-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,EDO,MG ; X-RAY DIFFRACTION 1.68Å

e7r5pB1[B:1-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,MG ; X-RAY DIFFRACTION 1.68Å

e7r5pD1[D:1-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,MG ; X-RAY DIFFRACTION 1.68Å

e7r5pE1[E:1-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,MG ; X-RAY DIFFRACTION 1.68Å

e7r4vA1[A:2-155] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: CU1 ; X-RAY DIFFRACTION 1.30Å

e7r5gB1[B:2-155] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 ; ligands: CU,MG ; X-RAY DIFFRACTION 2.2Å

e7r5pC1[C:2-155] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FtrA-P19 protein ; ligands: CU1,MG ; X-RAY DIFFRACTION 1.68Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

X: Glycosyl hydrolase domain-like

some similarity with Ig fold

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes