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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: ClpS-like

contains a HTH motif

X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

PF00240 CL0072

Representatives:

e2bwfA1[A:2-74] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

UBIQUITIN-LIKE PROTEIN DSK2 ; ligands: FMT ; X-RAY DIFFRACTION 1.150Å

e1ogwA1[A:1-76] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

UBIQUITIN ; X-RAY DIFFRACTION 1.32Å

e2zeqA1[A:1-78] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase parkin ; X-RAY DIFFRACTION 1.65Å

e6c5xE1[E:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 3.100Å

e6c5xB1[B:1-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 3.100Å

e6ffaB1[B:78-155] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; ligands: GOL ; X-RAY DIFFRACTION 1.50Å

e6fmjA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.45Å

e6gf1B1[B:3-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin D ; ligands: SO4 ; X-RAY DIFFRACTION 1.92Å

e6gfxA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.830Å

e6bvbB1[B:1-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.002Å

e6gmrB1[B:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: SO4 ; X-RAY DIFFRACTION 1.75Å

e6gmqA1[A:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.75Å

e6glcA3[A:0-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase parkin ; ligands: GOL ; X-RAY DIFFRACTION 1.80Å

e6fnnC1[C:-11-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ; ligands: ZN ; X-RAY DIFFRACTION 1.85Å

e6djwA3[A:25-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase ; X-RAY DIFFRACTION 3.800Å

e6gfyA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.700Å

e6gfyD1[D:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.700Å

e6gfyG1[G:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.700Å

e6gfyJ1[J:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.700Å

e6gfzA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.300Å

e6gfzD1[D:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.300Å

e6gfzG1[G:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.300Å

e6gfzJ1[J:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.300Å

e6gmnA1[A:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: ACT ; X-RAY DIFFRACTION 1.94Å

e6gmnD1[D:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.94Å

e6gmnG1[G:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.94Å

e6gmnJ1[J:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.94Å

e6gmqD1[D:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.75Å

e6gmqG1[G:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.75Å

e6gmqJ1[J:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.75Å

e6gmxA1[A:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.37Å

e6gmxG1[G:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.37Å

e6gmxJ1[J:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.37Å

e6gmxD1[D:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.37Å

e6gf1A1[A:4-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin D ; ligands: SO4 ; X-RAY DIFFRACTION 1.92Å

e6gf1C1[C:4-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin D ; ligands: SO4 ; X-RAY DIFFRACTION 1.92Å

e6fj7A1[A:-1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ; ligands: SO4 ; X-RAY DIFFRACTION 1.05Å

e6fnnD1[D:-11-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.85Å

e6fnoC1[C:-11-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.95Å

e6fnoD1[D:-10-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.95Å

e6djxA1[A:25-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase ; X-RAY DIFFRACTION 4.800Å

e6bi8C2[C:79-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; ligands: AYE,GOL,PGE ; X-RAY DIFFRACTION 2.291Å

e6hueA2[A:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase parkin ; X-RAY DIFFRACTION 2.85Å

e6bi8C1[C:4-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.291Å

e6bi8D1[D:79-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; ligands: AYE,EDO,GOL,PGE ; X-RAY DIFFRACTION 2.291Å

e6hueB2[B:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase parkin ; X-RAY DIFFRACTION 2.85Å

e6bi8D2[D:4-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.291Å

e6mdhA1[A:76-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 1.37Å

e6mdhA2[A:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 1.37Å

e5zewA1[A:1-77] Image Pymol Jmol Links: PDB, SCOP, CATH

Ubiquitin-like protein ; SOLUTION NMR

e6i4xB1[B:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.69Å

e6i5jB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.80Å

e6i5jE1[E:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.80Å

e6i5nB1[B:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.98Å

e6i5nE1[E:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.98Å

e6haxD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: EDO ; X-RAY DIFFRACTION 2.35Å

e6haxH1[H:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: EDO ; X-RAY DIFFRACTION 2.35Å

e6hayD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: EDO ; X-RAY DIFFRACTION 2.24Å

e6hayH1[H:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: EDO ; X-RAY DIFFRACTION 2.24Å

e6hr2D1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.76Å

e6hr2H1[H:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: EDO ; X-RAY DIFFRACTION 1.76Å

e6munB1[B:26-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquilin-2 ; SOLUTION NMR

e6r6hP1[P:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e6r7fP1[P:1-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e6r7hP1[P:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e6r7iP1[P:1-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e6r7nP1[P:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e6munC1[C:26-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquilin-2 ; SOLUTION NMR

e6jh0D2[D:85-161] Image Pymol Jmol Links: PDB, SCOP, CATH

ISG15 ubiquitin-like modifier ; X-RAY DIFFRACTION 2.40Å

e6jh1D2[D:77-149] Image Pymol Jmol Links: PDB, SCOP, CATH

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 3.00Å

e6jh0B2[B:85-161] Image Pymol Jmol Links: PDB, SCOP, CATH

ISG15 ubiquitin-like modifier ; X-RAY DIFFRACTION 2.40Å

e6jh1C1[C:77-149] Image Pymol Jmol Links: PDB, SCOP, CATH

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 3.00Å

e6i7qB1[B:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.798Å

e6i7rB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.949Å

e6sisB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 3.500Å

e6sisF1[F:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 3.500Å

e6p59W1[W:1-98] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.94Å

e6p59D1[D:1-98] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.94Å

e6j62A2[A:77-151] Image Pymol Jmol Links: PDB, SCOP, CATH

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.48Å

e6j62A1[A:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.48Å

e6oarB1[B:80-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Interferon stimulated gene 17 ; ligands: AYE ; X-RAY DIFFRACTION 2.06Å

e6oarD1[D:80-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Interferon stimulated gene 17 ; ligands: AYE ; X-RAY DIFFRACTION 2.06Å

e6oarF1[F:80-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Interferon stimulated gene 17 ; ligands: AYE ; X-RAY DIFFRACTION 2.06Å

e6oarH1[H:80-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Interferon stimulated gene 17 ; ligands: AYE ; X-RAY DIFFRACTION 2.06Å

e6oatB1[B:77-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Interferon stimulated gene 17 ; ligands: AYE ; X-RAY DIFFRACTION 3.15Å

e6oatD1[D:77-156] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Interferon stimulated gene 17 ; ligands: AYE ; X-RAY DIFFRACTION 3.15Å

e6v9hE1[E:2-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e6yvaC2[C:77-155] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 3.18Å

e6yvaC1[C:1-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 3.18Å

e6xa9D1[D:79-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ISG15 CTD-propargylamide ; X-RAY DIFFRACTION 2.90Å

e6xa9F1[F:79-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ISG15 CTD-propargylamide ; X-RAY DIFFRACTION 2.90Å

e6xa9B1[B:78-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ISG15 CTD-propargylamide ; X-RAY DIFFRACTION 2.90Å

e6zhcBBB1[BBB:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: EDO,IOD ; X-RAY DIFFRACTION 1.92Å

e7khhA1[A:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.278Å

e7s6pA2[A:3-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pB1[B:2-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pC2[C:3-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pE2[E:3-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pF2[F:3-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pA1[A:79-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pB2[B:82-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pC1[C:79-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pD1[D:3-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pD2[D:79-152] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pE1[E:79-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7s6pF1[F:79-153] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.150Å

e7rbsB1[B:79-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsD1[D:79-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsF1[F:79-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsH1[H:79-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsJ1[J:79-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsB2[B:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsD2[D:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsF2[F:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsH2[H:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7rbsJ2[J:1-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-like protein ISG15 ; X-RAY DIFFRACTION 2.98Å

e7sbiB2[B:428-503] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

2'-5' oligoadenylate synthase ; X-RAY DIFFRACTION 2.23Å

e7sbiA2[A:428-503] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

2'-5' oligoadenylate synthase ; X-RAY DIFFRACTION 2.23Å

e7w37x1[x:1-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin carboxyl-terminal hydrolase 14 ; ELECTRON MICROSCOPY

e7w38x1[x:1-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin carboxyl-terminal hydrolase 14 ; ELECTRON MICROSCOPY

e7w39x1[x:1-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin carboxyl-terminal hydrolase 14 ; ELECTRON MICROSCOPY

e7z6lD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.240Å

e7z76A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.32Å

e7z77A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 1.97Å

e7zntA1[A:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 3.000Å

e7zntD1[D:1-99] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 3.000Å

e7pyvC2[C:7-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

UBD ; X-RAY DIFFRACTION 3.268Å

e7s4eD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: EDO ; X-RAY DIFFRACTION 2.250Å

e7s4eH1[H:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.250Å

e8bb2J1[J:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; ligands: EDO,SCN ; X-RAY DIFFRACTION 2.050Å

e8bb3J1[J:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; ligands: EDO,SCN ; X-RAY DIFFRACTION 1.800Å

e8bb4I1[I:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 2.800Å

e8bb5A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; ligands: SCN ; X-RAY DIFFRACTION 2.200Å

e8bdiJ1[J:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.108Å

e8bdiD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.108Å

e8bdiG1[G:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.108Å

e8bdiA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.108Å

e8bdjA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.016Å

e8bdjD1[D:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.016Å

e8bdjG1[G:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.016Å

e8bdjJ1[J:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.016Å

e8bdlA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.29Å

e8bdlD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.29Å

e8bdlG1[G:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.29Å

e8bdlJ1[J:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.29Å

e8bdmG1[G:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.02Å

e8bdmD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.02Å

e8bdmA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.02Å

e8bdmJ1[J:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.02Å

e8bdnA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.76Å

e8bdnD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.76Å

e8bdnG1[G:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.76Å

e8bdnJ1[J:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.76Å

e8bdoA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.800Å

e8bdoD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.800Å

e8bdsA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: SO4 ; X-RAY DIFFRACTION 1.718Å

e8bdtB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.70Å

e8bdtF1[F:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.70Å

e8bdxB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.928Å

e8bdxF1[F:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 2.928Å

e8bebA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ligands: SO4 ; X-RAY DIFFRACTION 3.180Å

e8c13J1[J:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 2.30Å

e8cx0D1[D:2-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e8cx1D1[D:2-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e8cx1I1[I:2-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e8cx2D1[D:2-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e8cx2I1[I:2-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e8ebnC1[C:1-97] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 2.600Å

e8ebnE1[E:1-99] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 2.600Å

e7upnH1[H:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e7upnI1[I:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; ELECTRON MICROSCOPY

e7zlmB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.79Å

e7zlmE1[E:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.79Å

e7zlmH1[H:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.79Å

e7zlmK1[K:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.79Å

e7zlnB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 2.6Å

e7zloB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 2.218Å

e7zlpB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.94Å

e7zlrB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 2.007Å

e7zlsB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.92Å

e7zlsE1[E:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.92Å

e7zlsK1[K:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.92Å

e7zlsH1[H:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH

Elongin-B ; X-RAY DIFFRACTION 1.92Å

e8bs3B1[B:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: AYE ; X-RAY DIFFRACTION 2.20Å

e8g1pA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: GOL ; X-RAY DIFFRACTION 2.7Å

e8fviy1[y:1-96] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

; ELECTRON MICROSCOPY

e8cqeA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 2.85Å

e8ewvA1[A:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Elongin-B ; X-RAY DIFFRACTION 3.4Å

e8jalC1[C:2-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ei3A1[A:1-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.49Å

e8sebB1[B:76-157] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: AMP ; ELECTRON MICROSCOPY

e8j0aA1[A:-1-77] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: SO4 ; X-RAY DIFFRACTION 3Å

e3vdzA1[A:66-175] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-40S ribosomal protein S27a ; ligands: GD,SO4 ; X-RAY DIFFRACTION 2.4Å

e2ojrA1[A:66-175] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin ; ligands: TB ; X-RAY DIFFRACTION 2.600Å

e2o6vH1[H:702-776] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin ; X-RAY DIFFRACTION 2.2Å

e1bt0A1[A:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1) ; ligands: EDO,ZN ; X-RAY DIFFRACTION 1.7Å

e3q3fA2[A:105-188] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease/Ubiquitin chimeric protein ; ligands: SO4 ; X-RAY DIFFRACTION 2.17Å

e3dbhI1[I:91-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NEDD8 ; X-RAY DIFFRACTION 2.85Å

e2fcqA1[A:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin ; ligands: CD ; X-RAY DIFFRACTION 3.3Å

e2fcqB1[B:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin ; ligands: CD ; X-RAY DIFFRACTION 3.3Å

e1yiwC1[C:1-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin ; ligands: CD,CL ; X-RAY DIFFRACTION 1.39Å

e1yj1C1[C:1-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin ; ligands: CD,CL ; X-RAY DIFFRACTION 1.3Å

e2fcmA1[A:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin ; ligands: ACT,CD ; X-RAY DIFFRACTION 2.2Å

Previous Next

e2c9wB1[B:2-104] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 ; ligands: NI ; X-RAY DIFFRACTION 1.900Å

e1yqbA1[A:15-98] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

UBIQUILIN 3 ; X-RAY DIFFRACTION 2.0Å

e2fazA1[A:1-76] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

UBIQUITIN-LIKE CONTAINING PHD AND RING FINGER DOMAINS PROTEIN 1 ; X-RAY DIFFRACTION 2.0Å

e1z2mA1[A:3-78] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

interferon, alpha-inducible protein (clone IFI-15K) ; ligands: OS4 ; X-RAY DIFFRACTION 2.5Å

e1z2mA2[A:79-154] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

interferon, alpha-inducible protein (clone IFI-15K) ; X-RAY DIFFRACTION 2.5Å

e5b83A1[A:1-74] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

tetra ubiquitin ; X-RAY DIFFRACTION 2.69Å

e4e3cB2[B:310-394] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

INHIBITOR OF NUCLEAR FACTOR KAPPA-B KINASE SUBUNIT BETA ; X-RAY DIFFRACTION 3.98Å

e1m94A1[A:1-73] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein YNR032c-a ; SOLUTION NMR

e1ttnA1[A:21-100] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

dendritic cell-derived ubiquitin-like protein ; SOLUTION NMR

e1uelA1[A:1-95] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

UV excision repair protein RAD23 homolog B ; SOLUTION NMR

e1v5oA1[A:1-102] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

1700011N24Rik protein ; SOLUTION NMR

e1v5tA1[A:1-90] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

8430435I17Rik Protein ; SOLUTION NMR

e1v86A1[A:1-95] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

DNA segment, Chr 7, Wayne State University 128, expressed ; SOLUTION NMR

e1we6A1[A:1-111] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

splicing factor, putative ; SOLUTION NMR

e1wgdA1[A:1-93] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein ; SOLUTION NMR

e1wh3A1[A:1-87] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

59 kDa 2'-5'-oligoadenylate synthetase like protein ; SOLUTION NMR

e1wiaA1[A:156-250] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

hypothetical ubiquitin-like protein (RIKEN cDNA 2010008E23) ; SOLUTION NMR

e1wx8A1[A:8-90] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

RIKEN cDNA 4931431F19 ; SOLUTION NMR

e1wx9A1[A:8-80] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

HLA-B associated transcript-3 isoform b ; SOLUTION NMR

e1wxvA1[A:7-87] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

BAG-family molecular chaperone regulator-1 ; SOLUTION NMR

e1x1mA1[A:8-101] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

Ubiquitin-like protein SB132 ; SOLUTION NMR

e1zkhA1[A:1-86] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

Splicing factor 3 subunit 1 ; SOLUTION NMR

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes