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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

X: Bacillus chorismate mutase-like
H: L30e-like
T: L30e-like
F: Ribosomal_L7Ae

PF01248 CL0101

Representatives:

e1xbiA1[A:2-116] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L7Ae ; ligands: EPE ; X-RAY DIFFRACTION 1.44Å

e2bo1A1[A:1-100] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

50S RIBOSOMAL PROTEIN L30E ; ligands: SO4 ; X-RAY DIFFRACTION 1.7Å

e7wu0M1[M:10-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8b5lc1[c:10-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8b6cc1[c:10-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e7tm3c1[c:10-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

eL30 ; ELECTRON MICROSCOPY

e7tutc1[c:10-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

eL30 ; ELECTRON MICROSCOPY

e7qggSM1[SM:15-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7r4xM1[M:14-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7wttM1[M:14-129] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7wtuM1[M:14-129] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7wtvM1[M:14-129] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ligands: ZN ; ELECTRON MICROSCOPY

e7wtwM1[M:14-129] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7zjwB1[B:429-476,B:625-780] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

SECIS Binding Protein 2 ; ELECTRON MICROSCOPY

e8br8Ld1[Ld:2-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L30 ; ELECTRON MICROSCOPY

e8brmLd1[Ld:7-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L30 ; ELECTRON MICROSCOPY

e8bsiLd1[Ld:9-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L30 ; ELECTRON MICROSCOPY

e8bsjLd1[Ld:10-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L30 ; ELECTRON MICROSCOPY

e8btdLd1[Ld:12-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L30 ; ELECTRON MICROSCOPY

e8btrLd1[Ld:2-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L30 ; ELECTRON MICROSCOPY

e8br3LCC1[LCC:10-108] Image Pymol Jmol Links: PDB, SCOP, CATH

e8bqdAY1[AY:9-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8bqxAY1[AY:9-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8hfrcC1[cC:9-105] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e7uooc1[c:9-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e7uqbc1[c:9-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e7uqzc1[c:9-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e7v08c1[c:9-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8btkBc1[Bc:2-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

eL30 ; ELECTRON MICROSCOPY

e8g5yLc1[Lc:9-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ligands: MET,MG ; ELECTRON MICROSCOPY

e8g5zLc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8g60Lc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

eL30 ; ELECTRON MICROSCOPY

e8g61Lc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8g6jLc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8glpLc1[Lc:9-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ligands: MET,MG ; ELECTRON MICROSCOPY

e7xnxLc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e7xnyLc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8i9xLc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein l30-like protein ; ELECTRON MICROSCOPY

e8i9yLc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein l30-like protein ; ELECTRON MICROSCOPY

e8i9zLc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein l30-like protein ; ELECTRON MICROSCOPY

e8ia0Lc1[Lc:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein l30-like protein ; ELECTRON MICROSCOPY

e7z3nLc1[Lc:10-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein l30-like protein ; ELECTRON MICROSCOPY

e7z3oLc1[Lc:10-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein l30-like protein ; ELECTRON MICROSCOPY

e8bqdD1[D:23-143] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8bqxD1[D:23-143] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8cahD1[D:23-143] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8casF1[F:23-143] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8btkAl1[Al:9-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8br3SM01[SM0:14-128] Image Pymol Jmol Links: PDB, SCOP, CATH

e8g5ySM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8g5zSM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

eS12 ; ELECTRON MICROSCOPY

e8g60SM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

eS12 ; ELECTRON MICROSCOPY

e8g61SM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8g6jSM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8glpSM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7xnxSM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7xnySM1[SM:11-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7z3nSM1[SM:25-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e7z3oSM1[SM:25-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8cbjM1[M:18-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8azwP1[P:14-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8b2lP31[P3:14-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30-like ; ELECTRON MICROSCOPY

e8hkuL30E1[L30E:5-98] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hkyL30E1[L30E:5-98] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hl2L30E1[L30E:5-98] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L30e ; ELECTRON MICROSCOPY

e8hl5L30E1[L30E:5-98] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8bhfN31[N3:14-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8p5dLCC1[LCC:10-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8eubAc1[Ac:9-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ccsO1[O:9-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8fkyLO1[LO:13-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8p2kBc1[Bc:2-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8idtE1[E:9-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8auvC1[C:26-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

eS12 (40S ribosomal protein S12) ; ELECTRON MICROSCOPY

e8b2lC11[C1:26-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8eubBM1[BM:20-143] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8q5iAD1[AD:11-106] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

; ELECTRON MICROSCOPY

e8p2kAl1[Al:9-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8bpob21[b2:10-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bhfP11[P1:10-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8a98d1[d:10-99] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L30 ; ELECTRON MICROSCOPY

e8t4sM1[M:10-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ppkM1[M:10-132] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

40S ribosomal protein S12 ; ELECTRON MICROSCOPY

e8p5dSM01[SM0:14-128] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e2kg4A1[A:1-165] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Growth arrest and DNA-damage-inducible protein GADD45 alpha ; SOLUTION NMR

e3cg6B2[B:18-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Growth arrest and DNA-damage-inducible 45 gamma ; X-RAY DIFFRACTION 1.7Å

e3cg6A2[A:16-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Growth arrest and DNA-damage-inducible 45 gamma ; X-RAY DIFFRACTION 1.7Å

e3ffmA1[A:15-159] Image Pymol Jmol Links: PDB, SCOP, CATH

Growth arrest and DNA-damage-inducible protein GADD45 gamma ; X-RAY DIFFRACTION 2.3Å

e2walA1[A:11-159] Image Pymol Jmol Links: PDB, SCOP, CATH

GROWTH ARREST AND DNA-DAMAGE-INDUCIBLE PROTEIN GADD45 GAMMA ; ligands: MLA ; X-RAY DIFFRACTION 2.30Å

e2walB2[B:11-159] Image Pymol Jmol Links: PDB, SCOP, CATH

GROWTH ARREST AND DNA-DAMAGE-INDUCIBLE PROTEIN GADD45 GAMMA ; X-RAY DIFFRACTION 2.30Å

Previous

e2aleA1[A:1-126] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NHP2/L7AE FAMILY PROTEIN YEL026W ; ligands: MG ; X-RAY DIFFRACTION 1.8Å

e3j65H1[H:24-256] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4cxdG1[G:29-263] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes