Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
binds one zinc with two CxxC motifs on two beta-hairpins
binds two zincs. one in the same way as rubredoxin, probably related to rubredoxin. the other in a similar way as glucocorticoid receptor
Representatives:
e1borA1[A:1-56] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,
TRANSCRIPTION FACTOR PML ; ligands: ZN ; SOLUTION NMR
e7t9xA1[A:2-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Peroxisome assembly protein 12 ; ligands: ZN ; X-RAY DIFFRACTION 1.52Å
e8w59A1[A:435-495] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: ZN ; X-RAY DIFFRACTION 1.339Å
e7t9xB1[B:2-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Peroxisome assembly protein 12 ; ligands: ZN ; X-RAY DIFFRACTION 1.52Å
e8w59B1[B:434-495] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CA,ZN ; X-RAY DIFFRACTION 1.339Å
e8w5aA1[A:435-496] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: ZN ; X-RAY DIFFRACTION 1.65Å
e8iegB1[B:638-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
e8t3tL1[L:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
e8t3wK1[K:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
e8t3wL1[L:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
e8t3yK1[K:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
e8t3yL1[L:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
e2ma6A1[A:1-61] Image Pymol Jmol Links: PDB, SCOP, CATH
E3 UBIQUITIN-PROTEIN LIGASE RNF123 ; ligands: ZN ; SOLUTION NMR
e2yhnA1[A:373-436] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 3.0Å
e2vjeA1[A:432-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.20Å
e2vjeB1[B:430-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
MDM4 PROTEIN ; ligands: SO4,ZN ; X-RAY DIFFRACTION 2.20Å
e3eb5A1[A:540-604] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Baculoviral IAP repeat-containing protein 3 ; ligands: NA,ZN ; X-RAY DIFFRACTION 2.000Å
e3t6pA2[A:558-616] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Baculoviral IAP repeat-containing protein 2 ; ligands: ZN ; X-RAY DIFFRACTION 1.897Å
e2hdpA1[A:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ubiquitin-protein ligase E3 Mdm2 ; ligands: ZN ; SOLUTION NMR
e2hdpB1[B:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ubiquitin-protein ligase E3 Mdm2 ; ligands: ZN ; SOLUTION NMR
e2vjeC1[C:432-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.20Å
e2vjfA1[A:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.30Å
e2vjfC1[C:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.30Å
e2vjeD1[D:429-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
MDM4 PROTEIN ; ligands: FLC,SO4,ZN ; X-RAY DIFFRACTION 2.20Å
e2vjfB1[B:428-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
MDM4 PROTEIN ; ligands: ZN ; X-RAY DIFFRACTION 2.30Å
e2vjfD1[D:428-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
MDM4 PROTEIN ; ligands: FLC,ZN ; X-RAY DIFFRACTION 2.30Å
e3eb6A1[A:541-604] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Baculoviral IAP repeat-containing protein 3 ; ligands: ZN ; X-RAY DIFFRACTION 3.401Å
e2yhnB1[B:373-436] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 3.0Å
e4auqB1[B:239-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 7 ; ligands: ZN ; X-RAY DIFFRACTION 2.18Å
e2yhoA1[A:372-438] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ACT,ZN ; X-RAY DIFFRACTION 2.1Å
e2yhoC1[C:372-438] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 2.1Å
e2yhoE1[E:372-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 2.1Å
e2yhoG1[G:372-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ACT,ZN ; X-RAY DIFFRACTION 2.1Å
e4auqE1[E:237-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 7 ; ligands: ZN ; X-RAY DIFFRACTION 2.18Å
e2ea5A1[A:1-68] Image Pymol Jmol Links: PDB, SCOP, CATH
Cell growth regulator with RING finger domain protein 1 ; ligands: ZN ; SOLUTION NMR
e2mwxA1[A:49-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Protein PML ; ligands: ZN ; SOLUTION NMR
e5mnjC1[C:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.16Å
e5mnjG1[G:427-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.16Å
e5mnjD1[D:428-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Protein Mdm4 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 2.16Å
e5mnjH1[H:427-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Protein Mdm4 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 2.16Å
e4ic2B1[B:434-497] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: NI,ZN ; X-RAY DIFFRACTION 2.2Å
e2ecgA1[A:1-75] Image Pymol Jmol Links: PDB, SCOP, CATH
Baculoviral IAP repeat-containing protein 4 ; ligands: ZN ; SOLUTION NMR
e4ic3B1[B:424-487] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: NI,ZN ; X-RAY DIFFRACTION 1.78Å
e4ic2A1[A:424-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: ZN ; X-RAY DIFFRACTION 2.2Å
e4ic3A1[A:424-486] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: NI,ZN ; X-RAY DIFFRACTION 1.78Å
e4qplA2[A:30-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF146 ; ligands: V3L,ZN ; X-RAY DIFFRACTION 1.900Å
e4qplC2[C:30-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF146 ; ligands: V3L,ZN ; X-RAY DIFFRACTION 1.900Å
e3lrqA1[A:0-84] Image Pymol Jmol Links: PDB, SCOP, CATH
E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å
e3lrqB1[B:0-79] Image Pymol Jmol Links: PDB, SCOP, CATH
E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å
e3lrqC1[C:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH
E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å
e3lrqD1[D:1-84] Image Pymol Jmol Links: PDB, SCOP, CATH
E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å
e5o6tA1[A:434-497] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase XIAP ; ligands: EDO,ZN ; X-RAY DIFFRACTION 1.57Å
e5o6tB1[B:435-497] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase XIAP ; ligands: EDO,ZN ; X-RAY DIFFRACTION 1.57Å
e5zi6A1[A:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e5zi6B1[B:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e5zi6C1[C:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e5zi6D1[D:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e5zi6E1[E:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e5zi6F1[F:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e5zi6G1[G:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e5zi6H1[H:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å
e6hprA1[A:556-618] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Baculoviral IAP repeat-containing protein 2 ; ligands: ZN ; X-RAY DIFFRACTION 1.7Å
e6k2kA1[A:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; SOLUTION NMR
e6sqrA1[A:423-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,ZN ; X-RAY DIFFRACTION 2.18Å
e6sqoA1[A:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.41Å
e6sqoD1[D:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.41Å
e6sqpA1[A:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.21Å
e6sqpB1[B:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.21Å
e6sqpD1[D:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: NO3,ZN ; X-RAY DIFFRACTION 1.21Å
e6sqpC1[C:427-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.21Å
e6sqrD1[D:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,NO3,ZN ; X-RAY DIFFRACTION 2.18Å
e6sqrJ1[J:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,ZN ; X-RAY DIFFRACTION 2.18Å
e6sqrG1[G:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,NO3,ZN ; X-RAY DIFFRACTION 2.18Å
e6sqsA1[A:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.83Å
e6sqsD1[D:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.83Å
e7ah2AAA1[AAA:418-475] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.872Å
e7ah2BBB1[BBB:418-475] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.872Å
e7ahyAAA1[AAA:425-481] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.53Å
e7ahyBBB1[BBB:427-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.53Å
e7ahzAAA1[AAA:427-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å
e7ahzDDD1[DDD:427-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å
e7ahzGGG1[GGG:423-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å
e7ahzJJJ1[JJJ:426-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å
e7ai0AAA1[AAA:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.559Å
e7ai0DDD1[DDD:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.559Å
e7ai1AAA1[AAA:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,EDO,ZN ; X-RAY DIFFRACTION 2.07Å
e7ai1DDD1[DDD:431-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 2.07Å
e6m2dA1[A:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å
e6m2cE1[E:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å
e6m2cF1[F:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å
e6m2cG1[G:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å
e6m2cH1[H:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å
e6m2dB1[B:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å
e6m2dC1[C:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å
e6m2dD1[D:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å
e6m2dE1[E:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å
e6m2dF1[F:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 1.7950Å
e7t59A1[A:431-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,ZN
e7t59B1[B:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,ZN
e7t59C1[C:432-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,ZN
e7t59D1[D:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,ZN
e7tfgA1[A:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: I2S,ZN
e7tfgB1[B:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: I2S,ZN
e7tfgC1[C:426-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: I2S,ZN
e7tfgD1[D:426-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: ZN
e7thlA1[A:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,I61,ZN
e7thlB1[B:426-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,I61,ZN
e7thlC1[C:427-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CL,ZN
e7thlD1[D:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: ZN
e7mlaA1[A:424-490] Image Pymol Jmol Links: PDB, SCOP, CATH
Protein Mdm4 ; ligands: ZN ; SOLUTION NMR
e8w5aB1[B:434-497] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: CA,ZN ; X-RAY DIFFRACTION 1.65Å
e4orhC1[C:392-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å
e4epoC2[C:392-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4orhG1[G:345-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å
e4orhK1[K:345-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å
e4aycA1[A:348-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE RNF8 ; ligands: CPQ,SO4,ZN ; X-RAY DIFFRACTION 1.9Å
e2csyA1[A:1-81] Image Pymol Jmol Links: PDB, SCOP, CATH
Zinc finger protein 183-like 1 ; ligands: ZN ; SOLUTION NMR
e2d8tA1[A:1-71] Image Pymol Jmol Links: PDB, SCOP, CATH
RING finger protein 146 ; ligands: ZN ; SOLUTION NMR
e4epoG1[G:345-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4epoK1[K:345-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4epoH1[H:342-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4epoL1[L:342-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4aycB1[B:359-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 UBIQUITIN-PROTEIN LIGASE RNF8 ; ligands: CL,GOL,SO4,ZN ; X-RAY DIFFRACTION 1.9Å
e4whvC1[C:345-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å
e4whvD1[D:342-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å
e4whvI1[I:380-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å
e4whvJ1[J:380-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å
e4orhH1[H:342-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å
e4orhL1[L:342-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å
e4r7eA1[A:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
E3 ubiquitin-protein ligase BRE1 ; ligands: ZN ; X-RAY DIFFRACTION 2.25Å
e8ch6Z2[Z:230-235,Z:262-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RING finger protein 113A ; ELECTRON MICROSCOPY
e7qttZ1[Z:230-235,Z:262-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RING finger protein 113A ; ELECTRON MICROSCOPY
e8iegA1[A:637-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
e8t3tK1[K:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: ZN ; ELECTRON MICROSCOPY
Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
only binds one zinc, structurally very different
binds zinc with one beta-hairpin and one helix, the helix binds DNA
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes