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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

X: Rubredoxin-like

binds one zinc with two CxxC motifs on two beta-hairpins

X: RING/U-box-like

binds two zincs. one in the same way as rubredoxin, probably related to rubredoxin. the other in a similar way as glucocorticoid receptor

H: RING/U-box-like
T: RING/U-box
F: zf-C3HC4_3

PF13920 CL0229

Representatives:

e1borA1[A:1-56] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

TRANSCRIPTION FACTOR PML ; ligands: ZN ; SOLUTION NMR

e7t9xA1[A:2-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peroxisome assembly protein 12 ; ligands: ZN ; X-RAY DIFFRACTION 1.52Å

e8w59A1[A:435-495] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: ZN ; X-RAY DIFFRACTION 1.339Å

e7t9xB1[B:2-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peroxisome assembly protein 12 ; ligands: ZN ; X-RAY DIFFRACTION 1.52Å

e8w59B1[B:434-495] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CA,ZN ; X-RAY DIFFRACTION 1.339Å

e8w5aA1[A:435-496] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: ZN ; X-RAY DIFFRACTION 1.65Å

e8iegB1[B:638-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

e8t3tL1[L:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

e8t3wK1[K:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

e8t3wL1[L:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

e8t3yK1[K:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

e8t3yL1[L:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

e2ma6A1[A:1-61] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 UBIQUITIN-PROTEIN LIGASE RNF123 ; ligands: ZN ; SOLUTION NMR

e2yhnA1[A:373-436] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 3.0Å

e2vjeA1[A:432-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.20Å

e2vjeB1[B:430-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MDM4 PROTEIN ; ligands: SO4,ZN ; X-RAY DIFFRACTION 2.20Å

e3eb5A1[A:540-604] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baculoviral IAP repeat-containing protein 3 ; ligands: NA,ZN ; X-RAY DIFFRACTION 2.000Å

e3t6pA2[A:558-616] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baculoviral IAP repeat-containing protein 2 ; ligands: ZN ; X-RAY DIFFRACTION 1.897Å

e2hdpA1[A:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-protein ligase E3 Mdm2 ; ligands: ZN ; SOLUTION NMR

e2hdpB1[B:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ubiquitin-protein ligase E3 Mdm2 ; ligands: ZN ; SOLUTION NMR

e2vjeC1[C:432-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.20Å

e2vjfA1[A:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.30Å

e2vjfC1[C:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MDM2 ; ligands: ZN ; X-RAY DIFFRACTION 2.30Å

e2vjeD1[D:429-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MDM4 PROTEIN ; ligands: FLC,SO4,ZN ; X-RAY DIFFRACTION 2.20Å

e2vjfB1[B:428-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MDM4 PROTEIN ; ligands: ZN ; X-RAY DIFFRACTION 2.30Å

e2vjfD1[D:428-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MDM4 PROTEIN ; ligands: FLC,ZN ; X-RAY DIFFRACTION 2.30Å

e3eb6A1[A:541-604] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baculoviral IAP repeat-containing protein 3 ; ligands: ZN ; X-RAY DIFFRACTION 3.401Å

e2yhnB1[B:373-436] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 3.0Å

e4auqB1[B:239-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 7 ; ligands: ZN ; X-RAY DIFFRACTION 2.18Å

e2yhoA1[A:372-438] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ACT,ZN ; X-RAY DIFFRACTION 2.1Å

e2yhoC1[C:372-438] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 2.1Å

e2yhoE1[E:372-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ZN ; X-RAY DIFFRACTION 2.1Å

e2yhoG1[G:372-441] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE MYLIP ; ligands: ACT,ZN ; X-RAY DIFFRACTION 2.1Å

e4auqE1[E:237-293] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 7 ; ligands: ZN ; X-RAY DIFFRACTION 2.18Å

e2ea5A1[A:1-68] Image Pymol Jmol Links: PDB, SCOP, CATH

Cell growth regulator with RING finger domain protein 1 ; ligands: ZN ; SOLUTION NMR

e2mwxA1[A:49-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein PML ; ligands: ZN ; SOLUTION NMR

e5mnjC1[C:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.16Å

e5mnjG1[G:427-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.16Å

e5mnjD1[D:428-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein Mdm4 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 2.16Å

e5mnjH1[H:427-490] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein Mdm4 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 2.16Å

e4ic2B1[B:434-497] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: NI,ZN ; X-RAY DIFFRACTION 2.2Å

e2ecgA1[A:1-75] Image Pymol Jmol Links: PDB, SCOP, CATH

Baculoviral IAP repeat-containing protein 4 ; ligands: ZN ; SOLUTION NMR

e4ic3B1[B:424-487] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: NI,ZN ; X-RAY DIFFRACTION 1.78Å

e4ic2A1[A:424-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: ZN ; X-RAY DIFFRACTION 2.2Å

e4ic3A1[A:424-486] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE XIAP ; ligands: NI,ZN ; X-RAY DIFFRACTION 1.78Å

e4qplA2[A:30-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF146 ; ligands: V3L,ZN ; X-RAY DIFFRACTION 1.900Å

e4qplC2[C:30-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF146 ; ligands: V3L,ZN ; X-RAY DIFFRACTION 1.900Å

e3lrqA1[A:0-84] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å

e3lrqB1[B:0-79] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å

e3lrqC1[C:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å

e3lrqD1[D:1-84] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase TRIM37 ; ligands: ZN ; X-RAY DIFFRACTION 2.292Å

e5o6tA1[A:434-497] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase XIAP ; ligands: EDO,ZN ; X-RAY DIFFRACTION 1.57Å

e5o6tB1[B:435-497] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase XIAP ; ligands: EDO,ZN ; X-RAY DIFFRACTION 1.57Å

e5zi6A1[A:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e5zi6B1[B:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e5zi6C1[C:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e5zi6D1[D:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e5zi6E1[E:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e5zi6F1[F:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e5zi6G1[G:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e5zi6H1[H:605-659] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA-binding E3 ubiquitin-protein ligase MEX3C ; ligands: ZN ; X-RAY DIFFRACTION 2.200Å

e6hprA1[A:556-618] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Baculoviral IAP repeat-containing protein 2 ; ligands: ZN ; X-RAY DIFFRACTION 1.7Å

e6k2kA1[A:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; SOLUTION NMR

e6sqrA1[A:423-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,ZN ; X-RAY DIFFRACTION 2.18Å

e6sqoA1[A:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.41Å

e6sqoD1[D:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.41Å

e6sqpA1[A:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.21Å

e6sqpB1[B:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.21Å

e6sqpD1[D:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: NO3,ZN ; X-RAY DIFFRACTION 1.21Å

e6sqpC1[C:427-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.21Å

e6sqrD1[D:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,NO3,ZN ; X-RAY DIFFRACTION 2.18Å

e6sqrJ1[J:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,ZN ; X-RAY DIFFRACTION 2.18Å

e6sqrG1[G:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: EDO,NO3,ZN ; X-RAY DIFFRACTION 2.18Å

e6sqsA1[A:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.83Å

e6sqsD1[D:428-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.83Å

e7ah2AAA1[AAA:418-475] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.872Å

e7ah2BBB1[BBB:418-475] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.872Å

e7ahyAAA1[AAA:425-481] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.53Å

e7ahyBBB1[BBB:427-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 2.53Å

e7ahzAAA1[AAA:427-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å

e7ahzDDD1[DDD:427-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å

e7ahzGGG1[GGG:423-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å

e7ahzJJJ1[JJJ:426-482] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: ZN ; X-RAY DIFFRACTION 1.82Å

e7ai0AAA1[AAA:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.559Å

e7ai0DDD1[DDD:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 1.559Å

e7ai1AAA1[AAA:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,EDO,ZN ; X-RAY DIFFRACTION 2.07Å

e7ai1DDD1[DDD:431-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Mdm2 ; ligands: CL,ZN ; X-RAY DIFFRACTION 2.07Å

e6m2dA1[A:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å

e6m2cE1[E:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å

e6m2cF1[F:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å

e6m2cG1[G:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å

e6m2cH1[H:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 2.700Å

e6m2dB1[B:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å

e6m2dC1[C:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å

e6m2dD1[D:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å

e6m2dE1[E:296-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: SO4,ZN ; X-RAY DIFFRACTION 1.7950Å

e6m2dF1[F:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Mitochondrial ubiquitin ligase activator of NFKB 1 ; ligands: ZN ; X-RAY DIFFRACTION 1.7950Å

e7t59A1[A:431-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CL,ZN

e7t59B1[B:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CL,ZN

e7t59C1[C:432-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CL,ZN

e7t59D1[D:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CL,ZN

e7tfgA1[A:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: I2S,ZN

e7tfgB1[B:429-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: I2S,ZN

e7tfgC1[C:426-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: I2S,ZN

e7tfgD1[D:426-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: ZN

e7thlA1[A:430-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CL,I61,ZN

e7thlB1[B:426-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CL,I61,ZN

e7thlC1[C:427-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CL,ZN

e7thlD1[D:424-491] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: ZN

e7mlaA1[A:424-490] Image Pymol Jmol Links: PDB, SCOP, CATH

Protein Mdm4 ; ligands: ZN ; SOLUTION NMR

e8w5aB1[B:434-497] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: CA,ZN ; X-RAY DIFFRACTION 1.65Å

e4orhC1[C:392-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å

e4epoC2[C:392-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4orhG1[G:345-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å

e4orhK1[K:345-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å

e4aycA1[A:348-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE RNF8 ; ligands: CPQ,SO4,ZN ; X-RAY DIFFRACTION 1.9Å

e2csyA1[A:1-81] Image Pymol Jmol Links: PDB, SCOP, CATH

Zinc finger protein 183-like 1 ; ligands: ZN ; SOLUTION NMR

e2d8tA1[A:1-71] Image Pymol Jmol Links: PDB, SCOP, CATH

RING finger protein 146 ; ligands: ZN ; SOLUTION NMR

e4epoG1[G:345-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4epoK1[K:345-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4epoH1[H:342-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4epoL1[L:342-485] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4aycB1[B:359-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE RNF8 ; ligands: CL,GOL,SO4,ZN ; X-RAY DIFFRACTION 1.9Å

e4whvC1[C:345-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å

e4whvD1[D:342-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å

e4whvI1[I:380-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å

e4whvJ1[J:380-480] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 8.300Å

e4orhH1[H:342-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å

e4orhL1[L:342-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RNF8 ; ligands: ZN ; X-RAY DIFFRACTION 4.800Å

e4r7eA1[A:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase BRE1 ; ligands: ZN ; X-RAY DIFFRACTION 2.25Å

e8ch6Z2[Z:230-235,Z:262-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RING finger protein 113A ; ELECTRON MICROSCOPY

e7qttZ1[Z:230-235,Z:262-309] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RING finger protein 113A ; ELECTRON MICROSCOPY

e8iegA1[A:637-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

e8t3tK1[K:632-700] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: ZN ; ELECTRON MICROSCOPY

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

T: Ariadne-1 protein homolog

only binds one zinc, structurally very different

X: Glucocorticoid receptor-like

binds zinc with one beta-hairpin and one helix, the helix binds DNA

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes