Home Help

X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

Keyword search

Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

X: Hypothetical protein YqbG-like
H: Hypothetical protein YqbG-like
T: Hypothetical protein YqbG-like
F: Phage_connect_1

PF05135 CL0643

Representatives:

e3jvoA1[A:2-97] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: MPD ; X-RAY DIFFRACTION 2.100Å

e2kbzA1[A:39-137] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

15 protein (Bacteriophage SPP1 complete nucleotide sequence) ; SOLUTION NMR

e3jvoB1[B:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: MPD ; X-RAY DIFFRACTION 2.100Å

e3jvoC1[C:1-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; X-RAY DIFFRACTION 2.100Å

e3jvoD1[D:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; X-RAY DIFFRACTION 2.100Å

e3jvoE1[E:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; X-RAY DIFFRACTION 2.100Å

e3jvoF1[F:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; X-RAY DIFFRACTION 2.100Å

e3jvoG1[G:2-98] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: MPD ; X-RAY DIFFRACTION 2.100Å

e3jvoH1[H:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: MPD ; X-RAY DIFFRACTION 2.100Å

e3jvoI1[I:2-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: CL,MPD ; X-RAY DIFFRACTION 2.100Å

e3jvoJ1[J:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: MPD ; X-RAY DIFFRACTION 2.100Å

e3jvoK1[K:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: MPD ; X-RAY DIFFRACTION 2.100Å

e3jvoL1[L:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: CL,MPD ; X-RAY DIFFRACTION 2.100Å

e3jvoM1[M:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Gp6 ; ligands: MPD ; X-RAY DIFFRACTION 2.100Å

e5a20C1[C:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

15 PROTEIN ; ELECTRON MICROSCOPY

e5a20D1[D:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

15 PROTEIN ; ELECTRON MICROSCOPY

e5a21C1[C:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

15 PROTEIN ; ELECTRON MICROSCOPY

e5a21D1[D:4-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

15 PROTEIN ; ELECTRON MICROSCOPY

e7z4wa1[a:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wb1[b:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wc1[c:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wd1[d:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4we1[e:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wf1[f:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wg1[g:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wh1[h:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wi1[i:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wj1[j:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wk1[k:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

e7z4wl1[l:1-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Head completion protein gp15 ; ELECTRON MICROSCOPY

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes