Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers




Representatives:
e1m4iA1[A:1-181]
nonrep
Image
Pymol
Jmol Links:
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CATH, PubMed,
DOI
Aminoglycoside 2'-N-acetyltransferase ; ligands: COA,KAN,PAP ; X-RAY DIFFRACTION 1.5Å
Domain assembly:
Domain assembly:
Domain assembly:
Domain assembly:
Domain assembly:
e2hv2A2[A:140-286]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH
HYPOTHETICAL PROTEIN , X-RAY DIFFRACTION 2.4Å
e2hv2A3[A:2-139] Image Pymol Jmol Links: PDB, SCOP, CATH
HYPOTHETICAL PROTEIN , X-RAY DIFFRACTION 2.4Å
e2hv2C3[C:1-139] Image Pymol Jmol Links: PDB, SCOP, CATH
HYPOTHETICAL PROTEIN ; ligands: EPE,PG4 ; X-RAY DIFFRACTION 2.4Å
e2hv2D3[D:2-139] Image Pymol Jmol Links: PDB, SCOP, CATH
HYPOTHETICAL PROTEIN ; ligands: EPE,PG4 ; X-RAY DIFFRACTION 2.4Å
e2hv2E3[E:1-139] Image Pymol Jmol Links: PDB, SCOP, CATH
HYPOTHETICAL PROTEIN ; ligands: EPE,PG4 ; X-RAY DIFFRACTION 2.4Å
e2hv2F3[F:1-139] Image Pymol Jmol Links: PDB, SCOP, CATH
HYPOTHETICAL PROTEIN ; ligands: PG4 ; X-RAY DIFFRACTION 2.4Å
e2i00B3[B:11-155] Image Pymol Jmol Links: PDB, SCOP, CATH
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.30Å
e2i00D3[D:11-155] Image Pymol Jmol Links: PDB, SCOP, CATH
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.30Å
e2i00E3[E:11-155] Image Pymol Jmol Links: PDB, SCOP, CATH
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.30Å
e2i00C6[C:9-155] Image Pymol Jmol Links: PDB, SCOP, CATH
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.30Å
e2i00F6[F:9-155] Image Pymol Jmol Links: PDB, SCOP, CATH
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.30Å
e3n7zA3[A:6-131] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.75Å
e3n7zB3[B:7-131] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.75Å
e3n7zC3[C:7-131] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.75Å
e3n7zD3[D:7-131] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.75Å
e3n7zE3[E:7-131] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.75Å
e3n7zF3[F:7-131] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Acetyltransferase, GNAT family ; X-RAY DIFFRACTION 2.75Å
e6rftA2[A:2-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E36_21790 ; ligands: ACO ; X-RAY DIFFRACTION 2.3Å
e6rftB1[B:4-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E36_21790 ; ligands: ACO ; X-RAY DIFFRACTION 2.3Å
e6rftC2[C:2-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E36_21790 ; ligands: ACO ; X-RAY DIFFRACTION 2.3Å
e6rftD3[D:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E36_21790 ; ligands: ACO ; X-RAY DIFFRACTION 2.3Å
e6rftE3[E:2-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E36_21790 ; ligands: ACO ; X-RAY DIFFRACTION 2.3Å
e6rftF1[F:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E36_21790 ; ligands: ACO ; X-RAY DIFFRACTION 2.3Å
e6rfxD2[D:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: ACT,CIT,P4K ; X-RAY DIFFRACTION 1.9Å
e6rfxA1[A:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: ACT,CIT,P4K ; X-RAY DIFFRACTION 1.9Å
e6rfxB3[B:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: ACT,CIT,P4K ; X-RAY DIFFRACTION 1.9Å
e6rfxC2[C:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: ACT,CIT,P4K ; X-RAY DIFFRACTION 1.9Å
e6rfxE2[E:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: ACT,CIT,P4K ; X-RAY DIFFRACTION 1.9Å
e6rfxF2[F:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: CIT ; X-RAY DIFFRACTION 1.9Å
e6rfyA2[A:2-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: BTB,SO4 ; X-RAY DIFFRACTION 2.2Å
e6rfyB2[B:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: BTB,SO4 ; X-RAY DIFFRACTION 2.2Å
e6rfyC3[C:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: SO4 ; X-RAY DIFFRACTION 2.2Å
e6rfyD3[D:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: BTB,SO4 ; X-RAY DIFFRACTION 2.2Å
e6rfyE3[E:3-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: BTB,SO4 ; X-RAY DIFFRACTION 2.2Å
e6rfyF2[F:4-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Eis2 ; ligands: BTB,SO4 ; X-RAY DIFFRACTION 2.2Å
e6ycaA1[A:24-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E76_00625 ; ligands: ACO,SO4 ; X-RAY DIFFRACTION 2.9Å
e6ycaB2[B:24-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E76_00625 ; ligands: ACO,SO4 ; X-RAY DIFFRACTION 2.9Å
e6ycaC3[C:23-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E76_00625 ; ligands: ACO,SO4 ; X-RAY DIFFRACTION 2.9Å
e6ycaD1[D:23-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E76_00625 ; ligands: ACO,SO4 ; X-RAY DIFFRACTION 2.9Å
e6ycaE2[E:23-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E76_00625 ; ligands: ACO,SO4 ; X-RAY DIFFRACTION 2.9Å
e6ycaF2[F:23-158] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Uncharacterized N-acetyltransferase D2E76_00625 ; ligands: ACO,SO4 ; X-RAY DIFFRACTION 2.9Å
Domain assembly:

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes