Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices




Representatives:
e2fx0A2[A:77-198]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
HEMOLYSIN II REGULATORY PROTEIN ; X-RAY DIFFRACTION 2.4Å
e3lwjA2[A:74-200] Image Pymol Jmol Links: PDB, SCOP, CATH
Putative TetR-family transcriptional regulator ; ligands: EDO ; X-RAY DIFFRACTION 2.07Å
e3npiA2[A:85-227] Image Pymol Jmol Links: PDB, SCOP, CATH
TetR family regulatory protein ; ligands: SO4 ; X-RAY DIFFRACTION 2.96Å
e3npiB4[B:87-226] Image Pymol Jmol Links: PDB, SCOP, CATH
TetR family regulatory protein ; ligands: SO4 ; X-RAY DIFFRACTION 2.96Å
e3dewA2[A:70-196] Image Pymol Jmol Links: PDB, SCOP, CATH
Transcriptional regulator, TetR family ; ligands: ACY,BME,CL,EDO ; X-RAY DIFFRACTION 1.75Å
e2jk3A1[A:77-190] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
HEMOLYSIN II REGULATORY PROTEIN ; ligands: SO4 ; X-RAY DIFFRACTION 2.2Å
e2wv1A2[A:77-198] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
HEMOLYSIN II REGULATORY PROTEIN ; X-RAY DIFFRACTION 2.3Å
e2jk3B2[B:77-190] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
HEMOLYSIN II REGULATORY PROTEIN ; ligands: SO4 ; X-RAY DIFFRACTION 2.2Å
e2jj7A1[A:77-183] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,
HEMOLYSIN II REGULATORY PROTEIN ; X-RAY DIFFRACTION 2.10Å
e2jj7B2[B:77-183] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,
HEMOLYSIN II REGULATORY PROTEIN ; X-RAY DIFFRACTION 2.10Å
e2wv1B2[B:77-198] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
HEMOLYSIN II REGULATORY PROTEIN ; ligands: NO3 ; X-RAY DIFFRACTION 2.3Å

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes