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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: Reverse ferredoxin
H: Lesion bypass DNA polymerase (Y-family), little finger domain
T: Lesion bypass DNA polymerase (Y-family), little finger domain
F: IMS_C

PF11799

Representatives:

e1jx4A2[A:241-341] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV (FAMILY Y) ; X-RAY DIFFRACTION 1.7Å

e3bq2A2[A:240-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.70Å

e3bq1A2[A:240-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.7Å

e1k1qB2[B:240-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DBH protein ; X-RAY DIFFRACTION 2.8Å

e1k1sA2[A:240-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DBH protein ; X-RAY DIFFRACTION 2.8Å

e3bq0A2[A:240-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.6Å

e4hykA2[A:242-343] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.8Å

e1k1qA6[A:242-344] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DBH protein ; X-RAY DIFFRACTION 2.8Å

e4nlgA6[A:242-344] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e8evfA4[A:315-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 2.87Å

e8gkrA3[A:315-432] Image Pymol Jmol Links: PDB, SCOP, CATH

; X-RAY DIFFRACTION 2.784Å

e8skiA1[A:315-432] Image Pymol Jmol Links: PDB, SCOP, CATH

; X-RAY DIFFRACTION 2.163Å

e5dqiA3[A:315-432] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; X-RAY DIFFRACTION 2.30Å

e5dlfA2[A:315-432] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; X-RAY DIFFRACTION 1.97Å

e5dlgA3[A:315-432] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; X-RAY DIFFRACTION 2.35Å

e5dqgA4[A:315-432] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; X-RAY DIFFRACTION 2.29Å

e5dqhA4[A:315-432] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; X-RAY DIFFRACTION 1.99Å

e1s0nA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION

e2r8iA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.38Å

e2aslA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.65Å

e2uvvA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.200Å

e2bquA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.5Å

e1s0mA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: CA ; X-RAY DIFFRACTION

e2agpB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: MG ; X-RAY DIFFRACTION 2.90Å

e1n56B2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.4Å

e2agpA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.90Å

e2uvuA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.7Å

e1n48A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.2Å

e2j6uA2[A:244-344] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.500Å

e2jejA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 1.860Å

e1s0mB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: BAP,CA ; X-RAY DIFFRACTION

e2asdA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 1.95Å

e1jxlA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV (family Y) ; X-RAY DIFFRACTION 2.1Å

e2c2dA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.560Å

e1ryrA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.280Å

e2asdB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 1.95Å

e2c2eA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.61Å

e2agqA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.100Å

e2asjA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.35Å

e2va3A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.98Å

e2br0A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.170Å

e2jefA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.170Å

e2asjB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.35Å

e2imwP2[P:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: EDO ; X-RAY DIFFRACTION 2.050Å

e2rdjA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.200Å

e2r8gA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.70Å

e2v9wA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 3.0Å

e2au0A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DPO4 POLYMERASE IV ; X-RAY DIFFRACTION 2.7Å

e2atlA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DPO4 POLYMERASE IV ; X-RAY DIFFRACTION 2.8Å

e2va2A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.8Å

e2j6sA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.500Å

e2rdiA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 1.920Å

e1n56A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.4Å

e1s9fC2[C:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.0Å

e2agoA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: MG ; X-RAY DIFFRACTION 2.85Å

e2atlB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DPO4 POLYMERASE IV ; X-RAY DIFFRACTION 2.8Å

e2ibkA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: BAP,EDO ; X-RAY DIFFRACTION 2.25Å

e1s97B2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e1rysB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: NA ; X-RAY DIFFRACTION 2.000Å

e1s97D2[D:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e2va2B2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.8Å

e2v9wB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 3.0Å

e1s9fD2[D:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.0Å

e2aslB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.65Å

e1s97A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e2uvwA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.09Å

e2c28A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.270Å

e1s9fB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.0Å

e1s97C2[C:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e2j6tA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.6Å

e2bq3A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.0Å

e1s10A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.10Å

e1s9fA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.0Å

e1s0oB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: MG ; X-RAY DIFFRACTION 2.00Å

e1s0oA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: MG ; X-RAY DIFFRACTION 2.00Å

e1rysA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: CA ; X-RAY DIFFRACTION 2.000Å

e2c2rA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.55Å

e2c22A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.56Å

e2bqrA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.37Å

e2jegA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.380Å

e2rdjB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.200Å

e2au0B2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DPO4 POLYMERASE IV ; X-RAY DIFFRACTION 2.7Å

e2uvrA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.9Å

e2r8hA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.48Å

e2jeiA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.390Å

e2r8jA2[A:390-509] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 3.1Å

e2r8kA2[A:390-509] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 3.3Å

e2r8jB2[B:390-509] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 3.1Å

e2r8kB2[B:390-509] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 3.3Å

e1jihB2[B:390-509] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 2.25Å

e1unnD1[D:241-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: SO4 ; X-RAY DIFFRACTION 1.900Å

e2dpjA2[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IOTA ; X-RAY DIFFRACTION 2.3Å

e2alzA2[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IOTA ; X-RAY DIFFRACTION 2.5Å

e2dpiA2[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IOTA ; X-RAY DIFFRACTION 2.3Å

e1t3nB2[B:720-834] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

polymerase (DNA directed) iota ; X-RAY DIFFRACTION 2.3Å

e2fllA2[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IOTA ; X-RAY DIFFRACTION 2.6Å

e3qz7A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.0Å

e3pvxA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: CA ; X-RAY DIFFRACTION 3.03Å

e2wtfA2[A:390-509] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 2.5Å

e3g6vA2[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase iota ; X-RAY DIFFRACTION 2.2Å

e1t3nA2[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

polymerase (DNA directed) iota ; X-RAY DIFFRACTION 2.3Å

e3v6hA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.3Å

e4ebcA4[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IOTA ; ligands: GOL ; X-RAY DIFFRACTION 2.9Å

e3gqcA3[A:707-828] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA REPAIR PROTEIN REV1 ; X-RAY DIFFRACTION 2.5Å

e2w7oA2[A:406-520] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.16Å

e2w9bA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.28Å

e2w9cA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.87Å

e2w9cB2[B:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.87Å

e2w8kA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 3.1Å

e2w8lA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 3.0Å

e2w9aA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.6Å

e2w9bB2[B:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.28Å

e3fdsA2[A:241-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: EDO,GOL ; X-RAY DIFFRACTION 2.050Å

e3giiA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.6Å

e3gijA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e3gijB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e3gikA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.9Å

e3gilA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.70Å

e3gilB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.70Å

e3gimA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.70Å

e3gv5B2[B:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase iota ; ligands: CA,GOL ; X-RAY DIFFRACTION 1.950Å

e3gqcB2[B:702-828] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA REPAIR PROTEIN REV1 ; X-RAY DIFFRACTION 2.5Å

e3gqcC2[C:707-827] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA REPAIR PROTEIN REV1 ; X-RAY DIFFRACTION 2.5Å

e3gqcD2[D:702-827] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA REPAIR PROTEIN REV1 ; X-RAY DIFFRACTION 2.5Å

e2oh2B2[B:406-517] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA polymerase kappa ; X-RAY DIFFRACTION 3.05Å

e3gv5D2[D:300-415] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase iota ; ligands: CA ; X-RAY DIFFRACTION 1.950Å

e2v4qA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.6Å

e2xc9A2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.2Å

e2xcaA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: MG ; X-RAY DIFFRACTION 2.5Å

e2xcpA2[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: MG ; X-RAY DIFFRACTION 2.6Å

e2v4rA2[A:242-343] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.50Å

e2xcpB2[B:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: MG ; X-RAY DIFFRACTION 2.6Å

e3khgA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.96Å

e3khgB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.96Å

e3khhA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: AF ; X-RAY DIFFRACTION 2.70Å

e3khhB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: AF ; X-RAY DIFFRACTION 2.70Å

e3khlA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: AF ; X-RAY DIFFRACTION 2.10Å

e3khlB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: AF ; X-RAY DIFFRACTION 2.10Å

e3khrA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: AF ; X-RAY DIFFRACTION 2.00Å

e3khrB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; ligands: AF ; X-RAY DIFFRACTION 2.00Å

e3mfiA2[A:390-511] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; ligands: SO4 ; X-RAY DIFFRACTION 1.760Å

e2wtfB2[B:390-508] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; ligands: CA ; X-RAY DIFFRACTION 2.5Å

e3mfhA2[A:390-512] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; ligands: SO4 ; X-RAY DIFFRACTION 2.000Å

e3osnA2[A:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IOTA ; X-RAY DIFFRACTION 1.9Å

e2w7oB2[B:406-520] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.16Å

e2w7pA2[A:406-521] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.71Å

e2w7pB2[B:406-521] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.71Å

e3in5A2[A:406-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.2Å

e3in5B2[B:406-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.2Å

e3pw2A2[A:242-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.74Å

e3pw4A2[A:242-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.9Å

e3pw5A2[A:242-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 3.0Å

e3raqA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.25Å

e3raqB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.25Å

e3raxA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 1.89Å

e3raxB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 1.89Å

e3rb0A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 3.23Å

e3rb0B2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 3.23Å

e3rb3A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.80Å

e3rb4A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.81Å

e3rb4B2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.81Å

e3rb6A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.7Å

e3rb6B2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.7Å

e3rbdA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.5Å

e3rbdB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.5Å

e3rbeA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.8Å

e3rbeB2[B:1241-1341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.8Å

e3pr4A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.65Å

e3pr5B2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.4Å

e3pw7A2[A:244-344] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.9Å

e3pw7E2[E:244-344] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.9Å

e2xgpA2[A:390-510] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 2.70Å

e2xgpB2[B:390-510] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; ligands: CA ; X-RAY DIFFRACTION 2.70Å

e2xgqA2[A:390-510] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 2.70Å

e2xgqB2[B:390-510] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; ligands: CA ; X-RAY DIFFRACTION 2.70Å

e3q8pB2[B:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase iota ; X-RAY DIFFRACTION 1.95Å

e3q8qB2[B:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase iota ; X-RAY DIFFRACTION 2.03Å

e3q8sB2[B:300-414] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA polymerase iota ; X-RAY DIFFRACTION 2.09Å

e3ohaA2[A:390-512] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; ligands: SO4 ; X-RAY DIFFRACTION 2.000Å

e3ohbA2[A:390-512] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase eta ; ligands: SO4 ; X-RAY DIFFRACTION 2.000Å

e3pzpA2[A:406-520] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.34Å

e4f4yA2[A:242-343] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.338Å

e4f4yB2[B:242-343] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.338Å

e4g3iB2[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.5Å

e4g3iA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.5Å

e4juzA2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.650Å

e4jv0A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.95Å

e4jv1A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.300Å

e4jv2A2[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.740Å

e3pzpB2[B:406-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE KAPPA ; X-RAY DIFFRACTION 3.34Å

e4fbtA6[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.000Å

e4f4wA6[A:242-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 1.898Å

e4fbuB6[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.600Å

e4f4zA6[A:241-342] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.3Å

e2ia6A6[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: PO4 ; X-RAY DIFFRACTION 2.5Å

e2ia6B6[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: BAP ; X-RAY DIFFRACTION 2.5Å

e3m9mB6[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.900Å

e3m9nB6[B:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 1.93Å

e3qz8A6[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; X-RAY DIFFRACTION 2.0Å

e4fbuA6[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.600Å

e3t5hA6[A:241-341] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA polymerase IV ; X-RAY DIFFRACTION 2.35Å

Next

e1unnC1[C:241-351] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE IV ; ligands: SO4 ; X-RAY DIFFRACTION 1.900Å

e1jihA2[A:390-509] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA POLYMERASE ETA ; X-RAY DIFFRACTION 2.25Å

e1t94A2[A:411,A:414-515] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

polymerase (DNA directed) kappa ; X-RAY DIFFRACTION 2.4Å

e2oh2A4[A:406-517] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

DNA polymerase kappa ; X-RAY DIFFRACTION 3.05Å

e1zetA2[A:300-414] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Polymerase (DNA directed) iota ; X-RAY DIFFRACTION

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: ClpS-like

contains a HTH motif

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes