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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: ClpS-like

contains a HTH motif

X: Microbial ribonucleases-like
H: Microbial ribonucleases
T: Microbial ribonucleases
F: Ribonuclease

PF00545

Representatives:

e1lniA1[A:1-96] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE SA ; ligands: GOL,SO4 ; X-RAY DIFFRACTION 1.0Å

e1i0vA1[A:1-104] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.23Å

e2c4bA1[A:3-110] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BARNASE MCOEETI FUSION ; ligands: EDO,FMT,GOL,SO4 ; X-RAY DIFFRACTION 1.300Å

e5birB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 2.0Å

e1rn1B1[B:2-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ISOZYME ; ligands: SO4 ; X-RAY DIFFRACTION

e1trpA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ISOZYME ; ligands: 2GP,CA ; X-RAY DIFFRACTION

e1fusA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE F1 ; X-RAY DIFFRACTION

e1rhlA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.95Å

e1i0xA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP ; X-RAY DIFFRACTION 1.65Å

e4birA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: CA ; X-RAY DIFFRACTION 1.7Å

e1rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

RIBONUCLEASE T1 ISOZYME ; ligands: 2GP ; X-RAY DIFFRACTION

e1lowA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease T1 ; ligands: 3GP,CA ; X-RAY DIFFRACTION 1.9Å

e1g02A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.86Å

e1rgcA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 3GP,CA ; X-RAY DIFFRACTION

e1hyfA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,SR ; X-RAY DIFFRACTION 1.70Å

e4hohD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 2.050Å

e3hohA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP ; X-RAY DIFFRACTION 1.95Å

e5bu4A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.77Å

e1i2eA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.8Å

e2rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: CA,GPG ; X-RAY DIFFRACTION

e1futA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE F1 ; ligands: 2GP ; X-RAY DIFFRACTION

e1rgcB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 3GP,CA ; X-RAY DIFFRACTION

e1birB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.80Å

e1iyyA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; SOLUTION NMR

e3gspA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: CA,SGP ; X-RAY DIFFRACTION 1.9Å

e1i3fA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 2.35Å

e3rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: CA,VO4 ; X-RAY DIFFRACTION

e4rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; X-RAY DIFFRACTION

e1bviC1[C:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP ; X-RAY DIFFRACTION 1.9Å

e9rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: CA ; X-RAY DIFFRACTION

e1i0xD1[D:2-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.65Å

e4hohA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP ; X-RAY DIFFRACTION 2.050Å

e1rn4A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: PO4 ; X-RAY DIFFRACTION

e1ch0C1[C:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA,CL ; X-RAY DIFFRACTION 2.3Å

e1fysA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 2.0Å

e1i3iA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.76Å

e1hz1A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2GP,MG ; X-RAY DIFFRACTION 1.80Å

e7rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2AM,CA ; X-RAY DIFFRACTION

e1i0xB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.65Å

e1b2mB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; X-RAY DIFFRACTION 2.000Å

e1rmsA1[A:2-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE MS ; ligands: 3GP ; X-RAY DIFFRACTION

e1rlsA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

RIBONUCLEASE T1 ; ligands: 3GP,CA ; X-RAY DIFFRACTION

e1trpB1[B:201-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ISOZYME ; ligands: 2GP,CA ; X-RAY DIFFRACTION

e2hohD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.90Å

e1lovA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease T1 ; ligands: 3GP,CA ; X-RAY DIFFRACTION 1.55Å

e1rgkA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2AM,CA ; X-RAY DIFFRACTION

e6gspA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 3GP,CA ; X-RAY DIFFRACTION 2.2Å

e2hohB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,NA,PO4 ; X-RAY DIFFRACTION 1.90Å

e4hohB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP ; X-RAY DIFFRACTION 2.050Å

e3hohC1[C:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP ; X-RAY DIFFRACTION 1.95Å

e5hohD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 2.00Å

e1q9eC1[C:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease T1 precursor ; ligands: TRS ; X-RAY DIFFRACTION 1.700Å

e1trqA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ISOZYME ; ligands: 2GP,CA ; X-RAY DIFFRACTION

e8rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: ZN ; X-RAY DIFFRACTION

e2aaeA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: CA,PO4 ; X-RAY DIFFRACTION

e1rdsA1[A:2-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE MS ; ligands: GPC ; X-RAY DIFFRACTION

e1ch0B1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (RIBONUCLEASE T1) ; ligands: CA ; X-RAY DIFFRACTION 2.3Å

e1lraA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2GP,NA ; X-RAY DIFFRACTION

e5hohA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP ; X-RAY DIFFRACTION 2.00Å

e2aadB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ISOZYME ; ligands: 2GP,CA ; X-RAY DIFFRACTION

e1fzuA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.8Å

e1birA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.80Å

e1bviD1[D:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.9Å

e5rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: PGP ; X-RAY DIFFRACTION

e3birA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 2.3Å

e5gspA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 3GP,CA ; X-RAY DIFFRACTION 1.8Å

e1trqB1[B:201-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ISOZYME ; ligands: 2GP,CA ; X-RAY DIFFRACTION

e2aadA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ISOZYME ; ligands: 2GP,CA ; X-RAY DIFFRACTION

e1ygwA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; SOLUTION NMR

e4bu4A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.8Å

e1gspA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: CA,SGP ; X-RAY DIFFRACTION 2.2Å

e1bu4A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.90Å

e2birA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION 2.300Å

e2bu4A1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP,CA ; X-RAY DIFFRACTION 1.95Å

e1rglA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE T1 ; ligands: 2GP,CA ; X-RAY DIFFRACTION

e6rntA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

RIBONUCLEASE T1 ; ligands: 2AM,CA ; X-RAY DIFFRACTION

e1rclA1[A:1-103] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE F1 ; SOLUTION NMR

e1bviA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

PROTEIN (RIBONUCLEASE T1) ; ligands: 2GP ; X-RAY DIFFRACTION 1.9Å

e1jbtB1[B:1-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; X-RAY DIFFRACTION 2.7Å

e1jbrA1[A:1-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; X-RAY DIFFRACTION 2.15Å

e1de3A1[A:2-150] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ALPHA-SARCIN ; SOLUTION NMR

e1jbsB1[B:1-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; X-RAY DIFFRACTION 1.97Å

e1aqzB1[B:1-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; ligands: PO4 ; X-RAY DIFFRACTION 1.7Å

e1r4yA1[A:2-136] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease alpha-sarcin ; SOLUTION NMR

e1jbtA1[A:1-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; ligands: K ; X-RAY DIFFRACTION 2.7Å

e1jbrB1[B:1-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; X-RAY DIFFRACTION 2.15Å

e1aqzA1[A:1-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; ligands: PO4 ; X-RAY DIFFRACTION 1.7Å

e2kf3A1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease ; SOLUTION NMR

e3a5eA1[A:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE SA ; X-RAY DIFFRACTION 1.6Å

e3d4aA1[A:3-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SO4 ; X-RAY DIFFRACTION 2.2Å

e3agnA1[A:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE U2 ; ligands: 3AM,CA ; X-RAY DIFFRACTION 0.96Å

e1ttoA1[A:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNase T1 ; ligands: TRS ; X-RAY DIFFRACTION 2.1Å

e1ynvX1[X:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease Sa ; ligands: SO4 ; X-RAY DIFFRACTION 1.1Å

e1ttoB1[B:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNase T1 ; ligands: TRS ; X-RAY DIFFRACTION 2.1Å

e1ttoC1[C:1-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNase T1 ; ligands: TRS ; X-RAY DIFFRACTION 2.1Å

e2za4A1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease ; X-RAY DIFFRACTION 1.58Å

e2za4C1[C:2-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease ; ligands: CL ; X-RAY DIFFRACTION 1.58Å

e3d4aB1[B:1-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: 3GP,SO4 ; X-RAY DIFFRACTION 2.2Å

e3d4aC1[C:5-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SO4 ; X-RAY DIFFRACTION 2.2Å

e3d5gA1[A:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SO4 ; X-RAY DIFFRACTION 1.8Å

e3d5gB1[B:1-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; X-RAY DIFFRACTION 1.8Å

e3d5gC1[C:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SO4 ; X-RAY DIFFRACTION 1.8Å

e3d5iB1[B:1-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SGP ; X-RAY DIFFRACTION 2.2Å

e3d5iA1[A:4-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SO4 ; X-RAY DIFFRACTION 2.2Å

e3d5iC1[C:5-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SO4 ; X-RAY DIFFRACTION 2.2Å

e3kchA1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: PTD ; X-RAY DIFFRACTION 1.94Å

e3kchB1[B:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: PTD ; X-RAY DIFFRACTION 1.94Å

e3kchC1[C:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: PTD ; X-RAY DIFFRACTION 1.94Å

e2kf4A1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease ; SOLUTION NMR

e2kf5A1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease ; SOLUTION NMR

e2kf6A1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease ; SOLUTION NMR

e3dgyB1[B:1-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: 2GP,SO4 ; X-RAY DIFFRACTION 1.8Å

e3dgyC1[C:5-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: SO4 ; X-RAY DIFFRACTION 1.8Å

e3dh2C1[C:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: 3GP,BGC ; X-RAY DIFFRACTION 2.25Å

e3dh2D1[D:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: 3GP,BGC ; X-RAY DIFFRACTION 2.25Å

e3dgyA1[A:4-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: BGC,SO4 ; X-RAY DIFFRACTION 1.8Å

e3dh2A1[A:4-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: 3GP,BGC,SO4 ; X-RAY DIFFRACTION 2.25Å

e3dh2B1[B:4-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; ligands: 3GP,BGC ; X-RAY DIFFRACTION 2.25Å

e3agoA1[A:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE U2 ; ligands: 3AM,CA,CL ; X-RAY DIFFRACTION 0.99Å

e3ahsA1[A:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE U2 ; ligands: GOL,K,PO4 ; X-RAY DIFFRACTION 1.32Å

e3ahsB1[B:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE U2 ; ligands: K,PO4 ; X-RAY DIFFRACTION 1.32Å

e3ahsC1[C:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE U2 ; ligands: GOL,PO4 ; X-RAY DIFFRACTION 1.32Å

e3ahwA1[A:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease U2 ; ligands: 2AM,CA ; X-RAY DIFFRACTION 1.03Å

e4haaA1[A:1-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; X-RAY DIFFRACTION 1.9Å

e3q3fA1[A:1-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribonuclease/Ubiquitin chimeric protein ; ligands: SO4 ; X-RAY DIFFRACTION 2.17Å

e4haaD1[D:1-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; X-RAY DIFFRACTION 1.9Å

e4haaB1[B:1-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; X-RAY DIFFRACTION 1.9Å

e4haaC1[C:1-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE ; X-RAY DIFFRACTION 1.9Å

e2kaaA1[A:1-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hirsutellin A ; SOLUTION NMR

e1zgx.1[A:1-63,B:64-96] Image Pymol Jmol Links: PDB, SCOP, CATH

Guanyl-specific ribonuclease Sa ; ligands: SO4 ; X-RAY DIFFRACTION 1.12Å

e4ghoA1[A:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE SA ; ligands: SO4 ; X-RAY DIFFRACTION 1.1Å

e4ghoB1[B:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE SA ; X-RAY DIFFRACTION 1.1Å

e3urpA2[A:2-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: PGP,PO4,UNX ; X-RAY DIFFRACTION 3.19Å

e3syuA2[A:2-104] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE T1 ; ligands: 2GP,NA,UNX ; X-RAY DIFFRACTION 1.95Å

e4j5gA1[A:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease Sa ; ligands: SO4 ; X-RAY DIFFRACTION 1.31Å

e4j5gB1[B:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease Sa ; ligands: CAC,GOL ; X-RAY DIFFRACTION 1.31Å

e4j5kA1[A:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE SA ; ligands: GOL,SO4 ; X-RAY DIFFRACTION 1.23Å

e4j5kB1[B:1-96] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GUANYL-SPECIFIC RIBONUCLEASE SA ; ligands: GOL ; X-RAY DIFFRACTION 1.23Å

e3whoA1[A:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease Po1 ; X-RAY DIFFRACTION 1.85Å

e3whoB1[B:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease Po1 ; X-RAY DIFFRACTION 1.85Å

e3whoC1[C:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanyl-specific ribonuclease Po1 ; X-RAY DIFFRACTION 1.85Å

e3wr2A1[A:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH

Guanyl-specific ribonuclease Po1 ; ligands: 3GP ; X-RAY DIFFRACTION 1.75Å

e3wr2B1[B:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH

Guanyl-specific ribonuclease Po1 ; ligands: 3GP ; X-RAY DIFFRACTION 1.75Å

e3wr2C1[C:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH

Guanyl-specific ribonuclease Po1 ; ligands: 3GP ; X-RAY DIFFRACTION 1.75Å

e3wr2D1[D:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH

Guanyl-specific ribonuclease Po1 ; ligands: 3GP ; X-RAY DIFFRACTION 1.75Å

e3wr2E1[E:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH

Guanyl-specific ribonuclease Po1 ; ligands: 3GP ; X-RAY DIFFRACTION 1.75Å

e3wr2F1[F:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH

Guanyl-specific ribonuclease Po1 ; ligands: 3GP ; X-RAY DIFFRACTION 1.75Å

e5gy6A1[A:3-100] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease T1 ; ligands: ZN ; X-RAY DIFFRACTION 1.5Å

e6pqkA1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease ; ligands: EDO,PO4 ; X-RAY DIFFRACTION 1.200Å

e6pqkC1[C:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease ; ligands: EDO ; X-RAY DIFFRACTION 1.200Å

e6ls1A1[A:1-100] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease T1 ; ligands: GMP,PEG ; X-RAY DIFFRACTION 1.58Å

e6ls1B1[B:1-100] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease T1 ; ligands: SO4 ; X-RAY DIFFRACTION 1.58Å

e7mrxA1[A:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease ; X-RAY DIFFRACTION 2.290Å

e7mrxC1[C:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease ; X-RAY DIFFRACTION 2.290Å

e7mrxE1[E:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease ; X-RAY DIFFRACTION 2.290Å

e7w05A1[A:1-100] Image Pymol Jmol Links: PDB, SCOP, CATH

Ribonuclease T1 ; ligands: GMP,PEG ; X-RAY DIFFRACTION 1.19Å

e3da7A1[A:4-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Barnase circular permutant ; X-RAY DIFFRACTION 2.150Å

e3da7B1[B:3-111] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Barnase circular permutant ; X-RAY DIFFRACTION 2.150Å

e3da7E1[E:3-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Barnase circular permutant ; X-RAY DIFFRACTION 2.150Å

e3da7G1[G:2-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Barnase circular permutant ; X-RAY DIFFRACTION 2.150Å

Previous

e1rtuA1[A:1-114] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RIBONUCLEASE U2 ; ligands: SO4 ; X-RAY DIFFRACTION 1.8Å

e1jbsA1[A:1-149] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RESTRICTOCIN ; X-RAY DIFFRACTION 1.97Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes