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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

X: Membrane-associated protein VP24
H: Membrane-associated protein VP24
T: Membrane-associated protein VP24
F: Filo_VP24

PF06389

Representatives:

e3vneA1[A:9-232] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 2.0Å

e4d9oA1[A:10-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 2.0Å

e3vnfA1[A:13-226] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 1.8Å

e4m0qA1[A:10-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 1.920Å

e4m0qB1[B:10-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 1.920Å

e4or8A1[A:-2-241] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 2.654Å

e4d9oB2[B:15-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 2.0Å

e4or8B1[B:2-241] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 2.654Å

e4u2xA1[A:16-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; ligands: CL ; X-RAY DIFFRACTION 3.150Å

e4u2xB1[B:16-230] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; ligands: CL ; X-RAY DIFFRACTION 3.150Å

e4u2xC1[C:16-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; X-RAY DIFFRACTION 3.150Å

e6ehmC1[C:11-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; ELECTRON MICROSCOPY

e6ehmD1[D:11-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Membrane-associated protein VP24 ; ELECTRON MICROSCOPY

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes