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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

X: Helical domain in autophagy protein 5
H: Helical domain in autophagy protein 5
T: Helical domain in autophagy protein 5
F: ATG5_HBR

PF20637

Representatives:

e2dymA2[A:135-198] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.1Å

e2dymG3[G:135-198] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.1Å

e3w1sA4[A:112-175] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AUTOPHAGY PROTEIN 5 ; X-RAY DIFFRACTION 2.6Å

e3vqiA6[A:133-194] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATG5 ; ligands: EPE ; X-RAY DIFFRACTION 2.5Å

e4gdkB4[B:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.700Å

e3vqiB10[B:132-190] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATG5 ; ligands: EPE,SO4 ; X-RAY DIFFRACTION 2.5Å

e3vqiC10[C:133-190] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATG5 ; X-RAY DIFFRACTION 2.5Å

e3vqiE10[E:133-190] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATG5 ; ligands: EPE,SO4 ; X-RAY DIFFRACTION 2.5Å

e3vqiD10[D:133-190] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATG5 ; ligands: SO4 ; X-RAY DIFFRACTION 2.5Å

e4nawJ8[J:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; ligands: SO4 ; X-RAY DIFFRACTION 2.195Å

e4nawB8[B:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; ligands: SO4 ; X-RAY DIFFRACTION 2.195Å

e4nawF8[F:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; ligands: SO4 ; X-RAY DIFFRACTION 2.195Å

e4gdlB8[B:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.8750Å

e4nawN6[N:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; ligands: SO4 ; X-RAY DIFFRACTION 2.195Å

e4gdkE8[E:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.700Å

e2dymC3[C:119-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.1Å

e2dymE3[E:119-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.1Å

e4tq0A1[A:116-183] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.697Å

e4tq0C3[C:116-183] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.697Å

e4tq1A3[A:116-183] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 1.8Å

e4tq0E1[E:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 2.697Å

e5d7gA1[A:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.0Å

e5d7gC3[C:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.0Å

e5d7gE1[E:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.0Å

e5d7gG1[G:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.0Å

e5npwA3[A:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.100Å

e5npvA3[A:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.100Å

e5npvC2[C:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.100Å

e5npwC3[C:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.100Å

e5npwE3[E:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.100Å

e5npwG1[G:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Autophagy protein 5 ; X-RAY DIFFRACTION 3.100Å

e7w36A3[A:116-176] Image Pymol Jmol Links: PDB, SCOP, CATH

Autophagy protein 5 ; X-RAY DIFFRACTION 2.87Å

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes