Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel

Refs: Structure 14, 1489-1498; Current opinion in structural biology 18, 358-365




Representatives:
e1th7A1[A:3-78]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
SMALL NUCLEAR RIBOPROTEIN PROTEIN ; X-RAY DIFFRACTION 1.68Å
e1ljoA1[A:1-75]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
Archaeal Sm-like protein AF-Sm2 ; ligands: ACY ; X-RAY DIFFRACTION 1.95Å
e1d3bA1[A:4-75]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3) ; ligands: GOL ; X-RAY DIFFRACTION 2.000Å
e1d3bB1[B:7-87]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B) ; ligands: CIT,GOL ; X-RAY DIFFRACTION 2.000Å
e1b34A1[A:2-81]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1) ; X-RAY DIFFRACTION 2.5Å
e4v98B41[B4:5000-5069] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.1Å
e4v98CH1[CH:5000-5069] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.1Å
e4v98CP1[CP:5000-5069] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.1Å
e4v98CX1[CX:5000-5069] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.1Å
e4v98Cf1[Cf:5000-5069] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.1Å
e4v98Cn1[Cn:5000-5069] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.1Å
e4v98Cv1[Cv:5000-5069] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.1Å
e4v5uAQ1[AQ:326-415] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4v5uBQ1[BQ:326-415] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4v5uCQ1[CQ:324-415] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4v5uDQ1[DQ:326-415] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4v98AJ1[AJ:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98AB1[AB:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98AR1[AR:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98AZ1[AZ:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Ah1[Ah:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Ap1[Ap:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Ax1[Ax:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98BB1[BB:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98BJ1[BJ:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98BR1[BR:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98BZ1[BZ:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Bh1[Bh:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Bp1[Bp:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Bx1[Bx:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98CB1[CB:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98CJ1[CJ:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98CR1[CR:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98CZ1[CZ:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Ch1[Ch:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4v98Cp1[Cp:2000-2099] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.1Å
e4wzjBB1[BB:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjII1[II:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjPP1[PP:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjBBB1[BBB:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjIII1[III:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjPPP1[PPP:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjBBBB1[BBBB:4-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjIIII1[IIII:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjPPPP1[PPPP:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated proteins B and B' ; X-RAY DIFFRACTION 3.59Å
e4wzjEE1[EE:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjLL1[LL:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjSS1[SS:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjEEE1[EEE:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjLLL1[LLL:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjSSS1[SSS:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjEEEE1[EEEE:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjLLLL1[LLLL:14-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjSSSS1[SSSS:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 3.59Å
e4wzjKKK1[KKK:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjAA1[AA:3-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjHH1[HH:2-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjOO1[OO:3-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjHHH1[HHH:2-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjOOO1[OOO:3-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjAAAA1[AAAA:3-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjOOOO1[OOOO:3-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjCC1[CC:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjJJ1[JJ:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjQQ1[QQ:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjCCC1[CCC:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjJJJ1[JJJ:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjQQQ1[QQQ:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjCCCC1[CCCC:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjJJJJ1[JJJJ:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjQQQQ1[QQQQ:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 3.59Å
e4wzjFF1[FF:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjMM1[MM:1-80] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjTT1[TT:2-79] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjFFF1[FFF:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjMMM1[MMM:2-77] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjTTT1[TTT:2-77] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjFFFF1[FFFF:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjMMMM1[MMMM:2-79] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjTTTT1[TTTT:2-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.59Å
e4wzjGG1[GG:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjNN1[NN:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjUU1[UU:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjGGG1[GGG:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjNNN1[NNN:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjUUU1[UUU:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjGGGG1[GGGG:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjNNNN1[NNNN:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjUUUU1[UUUU:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.59Å
e4wzjDD1[DD:19-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjKK1[KK:13-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjRR1[RR:19-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjDDD1[DDD:19-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjRRR1[RRR:19-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjDDDD1[DDDD:13-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjKKKK1[KKKK:13-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjRRRR1[RRRR:19-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.59Å
e4wzjHHHH1[HHHH:2-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4wzjAAA1[AAA:2-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; X-RAY DIFFRACTION 3.59Å
e4xq3D1[D:4-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.600Å
e4xq3B1[B:6-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.600Å
e4xq3C1[C:6-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.600Å
e4xq3E1[E:6-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.600Å
e4xq3F1[F:5-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.600Å
e4xq3G1[G:5-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.600Å
e4xq3A1[A:7-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.600Å
e3jb9G1[G:19-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e3jb9l1[l:19-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e3jb9D1[D:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e3jb9Z1[Z:2-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e3jb9J1[J:3-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e3jb9o1[o:3-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e3jb9b1[b:2-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e3jb9H1[H:9-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e3jb9m1[m:9-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e3jb9F1[F:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e3jb9f1[f:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e3jb9I1[I:4-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e3jb9n1[n:4-78] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e3jb9E1[E:2-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5ganq1[q:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5ganf1[f:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5gaoq1[q:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5gank1[k:4-55,k:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5ganb1[b:4-55,b:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5gaok1[k:4-55,k:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5ganl1[l:1-48,l:76-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5ganh1[h:1-48,h:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5gaol1[l:1-48,l:76-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5ganr1[r:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5gang1[g:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5gaor1[r:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5gan51[5:4-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
U6 snRNA-associated Sm-like protein LSm5 ; ELECTRON MICROSCOPY
e5gan41[4:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
U6 snRNA-associated Sm-like protein LSm4 ; ELECTRON MICROSCOPY
e5gan71[7:26-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
U6 snRNA-associated Sm-like protein LSm7 ; ELECTRON MICROSCOPY
e5gan61[6:11-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
U6 snRNA-associated Sm-like protein LSm6 ; ELECTRON MICROSCOPY
e5gan21[2:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
U6 snRNA-associated Sm-like protein LSm2 ; ELECTRON MICROSCOPY
e5gan31[3:3-79] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
U6 snRNA-associated Sm-like protein LSm3 ; ELECTRON MICROSCOPY
e5ganm1[m:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5ganj1[j:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5gaom1[m:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5gann1[n:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5gand1[d:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5gaon1[n:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5ganp1[p:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5gane1[e:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5gaop1[p:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5gamf1[f:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5gamb1[b:4-55,b:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5gamh1[h:1-48,h:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5gamg1[g:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5gamj1[j:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5gamd1[d:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5game1[e:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e3jcmT1[T:1-47,T:71-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e3jcmP1[P:1-47,P:71-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e3jcmc1[c:1-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
U6 snRNA-associated Sm-like protein LSm2 ; ELECTRON MICROSCOPY
e3jcrp1[p:2-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
SmD1 ; ELECTRON MICROSCOPY
e3jcrP2[P:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
SmD1 ; ELECTRON MICROSCOPY
e5lj3k1[k:4-55,k:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5lj3l1[l:1-48,l:76-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5lj3m1[m:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5lj3n1[n:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5lj3q1[q:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5lj3p1[p:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5lj3r1[r:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5lj5h1[h:1-48,h:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5lj5l1[l:1-48,l:76-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5lj5j1[j:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5lj5m1[m:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5lj5d1[d:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5lj5n1[n:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5lj5b1[b:4-53,b:77-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5lj5k1[k:4-53,k:77-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5lj5f1[f:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5lj5q1[q:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5lj5e1[e:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5lj5p1[p:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5lj5g1[g:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5lj5r1[r:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5gm6k1[k:4-55,k:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5gm6m1[m:1-48,m:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5gm6g1[g:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5gm6l1[l:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5gm6h1[h:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5gm6i1[i:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5gm6j1[j:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5lqwh1[h:2-48,h:76-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5mpsh1[h:1-48,h:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5mq0h1[h:1-48,h:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5mq0l1[l:1-48,l:76-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5wsgk1[k:4-55,k:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5wsgF1[F:6-55,F:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY
e5wsgm1[m:1-48,m:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5wsgV1[V:1-48,V:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY
e5wsgg1[g:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5wsgW1[W:44-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY
e5wsgl1[l:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5wsgU1[U:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY
e5wsgh1[h:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5wsgH1[H:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY
e5wsgi1[i:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5wsgG1[G:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY
e5wsgj1[j:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
e5wsgK1[K:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY
Previous Nexte1b34B1[B:26-73,B:93-118]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2) ; X-RAY DIFFRACTION 2.5Å

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes