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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

X: Aldehyde ferredoxin oxidoreductase-C
H: Aldehyde ferredoxin oxidoreductase-C
T: Aldehyde ferredoxin oxidoreductase-C
F: AFOR_C

PF01314

Representatives:

e1b25A1[A:211-619] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE) ; ligands: PTT,SF4 ; X-RAY DIFFRACTION 1.85Å

e1aorA1[A:211-605] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

ALDEHYDE FERREDOXIN OXIDOREDUCTASE ; ligands: FE,PTE,SF4 ; X-RAY DIFFRACTION 2.3Å

e8c0zA1[A:210-616] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: BEZ,SF4,T7R ; ELECTRON MICROSCOPY

e8c0zB2[B:211-616] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: BEZ,SF4,T7R ; ELECTRON MICROSCOPY

e1aorB1[B:211-605] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

ALDEHYDE FERREDOXIN OXIDOREDUCTASE ; ligands: FE,PTE,SF4 ; X-RAY DIFFRACTION 2.3Å

e1b4nA1[A:211-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE ; ligands: CA,GUA,PTE,SF4 ; X-RAY DIFFRACTION 2.4Å

e1b4nC1[C:211-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE ; ligands: CA,GUA,PTE,SF4 ; X-RAY DIFFRACTION 2.4Å

e1b4nD1[D:211-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE ; ligands: CA,GUA,PTE,SF4 ; X-RAY DIFFRACTION 2.4Å

e1b25D1[D:211-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE) ; ligands: PTT,SF4 ; X-RAY DIFFRACTION 1.85Å

e1b25C1[C:211-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE) ; ligands: PTT,SF4 ; X-RAY DIFFRACTION 1.85Å

e1b25B1[B:211-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE) ; ligands: PTT,SF4 ; X-RAY DIFFRACTION 1.85Å

e1b4nB1[B:211-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE ; ligands: CA,GUA,PTE,SF4 ; X-RAY DIFFRACTION 2.4Å

e4z3wA2[A:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.208Å

e4z3wB2[B:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.208Å

e4z3wC2[C:274-653] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.208Å

e4z3wD2[D:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.208Å

e4z3xA2[A:274-653] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,PGE,SF4,UNL,W ; X-RAY DIFFRACTION 1.85Å

e4z3xB2[B:274-653] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 1.85Å

e4z3xC2[C:274-653] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 1.85Å

e4z3xD2[D:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: 4KX,MTE,PG4,PGE,SF4,UNL,W ; X-RAY DIFFRACTION 1.85Å

e4z3zA2[A:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W,ZN ; X-RAY DIFFRACTION 2.666Å

e4z3zB2[B:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W,ZN ; X-RAY DIFFRACTION 2.666Å

e4z3zC2[C:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W,ZN ; X-RAY DIFFRACTION 2.666Å

e4z3zD2[D:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W,ZN ; X-RAY DIFFRACTION 2.666Å

e4z40A2[A:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e4z40B2[B:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e4z40C2[C:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e4z40D2[D:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e4z3yA2[A:274-653] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: BYC,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e4z3yB1[B:274-653] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: BYC,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e4z3yC2[C:274-653] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: BYC,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e4z3yD2[D:274-652] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Benzoyl-CoA reductase, putative ; ligands: BYC,MTE,SF4,UNL,W ; X-RAY DIFFRACTION 2.35Å

e6x1oA1[A:225-623] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Formaldehyde:ferredoxin oxidoreductase wor5 ; ligands: MG,PO4,PTE,SF4,UKM ; X-RAY DIFFRACTION 2.094Å

e6x1oC1[C:225-624] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Formaldehyde:ferredoxin oxidoreductase wor5 ; ligands: MG,PO4,PTE,SF4,UKM ; X-RAY DIFFRACTION 2.094Å

e6x6uA1[A:225-623] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Formaldehyde:ferredoxin oxidoreductase wor5 ; ligands: MG,PO4,PTE,SF4,TAU ; X-RAY DIFFRACTION 1.944Å

e6x6uC1[C:225-623] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Formaldehyde:ferredoxin oxidoreductase wor5 ; ligands: MG,PO4,PTE,SF4,TAU ; X-RAY DIFFRACTION 1.944Å

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes