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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

X: WW domain-like
H: WW domain
T: WW domain
F: WW

PF00397 CL0680

Representatives:

e2ho2A1[A:253-285] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: GOL ; X-RAY DIFFRACTION 1.330Å

e1pinA1[A:6-39] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE ; ligands: 1PG,ALA,PRO ; X-RAY DIFFRACTION 1.35Å

e6zyyY1[Y:1134-1176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Shulin ; ELECTRON MICROSCOPY

e3le4A1[A:298-352] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Microprocessor complex subunit DGCR8 ; X-RAY DIFFRACTION 1.7Å

e2mdwA1[A:1-27] Image Pymol Jmol Links: PDB, SCOP, CATH

Designed protein ; SOLUTION NMR

e2mdwB1[B:1-27] Image Pymol Jmol Links: PDB, SCOP, CATH

Designed protein ; SOLUTION NMR

e7bqfA1[A:224-282] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein salvador homolog 1 ; ligands: DIO ; X-RAY DIFFRACTION 1.7Å

e1i8gB1[B:1-34] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e1i6cA1[A:1-34] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e1eg4A1[A:47-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DYSTROPHIN ; X-RAY DIFFRACTION 2.0Å

e1k9qA1[A:11-43] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

65 kDa Yes-associated protein ; SOLUTION NMR

e1k5rA1[A:11-43] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

65 KDA YES-ASSOCIATED PROTEIN ; SOLUTION NMR

e1k9rA1[A:11-43] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

65 kDa Yes-associated protein ; SOLUTION NMR

e1o6wA2[A:2-29] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PRE-MRNA PROCESSING PROTEIN PRP40 ; SOLUTION NMR

e1zr7A1[A:12-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

huntingtin-interacting protein HYPA/FBP11 ; SOLUTION NMR

e2dyfA1[A:12-37] Image Pymol Jmol Links: PDB, SCOP, CATH

Huntingtin-interacting protein HYPA/FBP11 ; SOLUTION NMR

e1ywjA1[A:15-42] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Formin-binding protein 3 ; SOLUTION NMR

e2idhG1[G:254-284] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.19Å

e2idhF1[F:254-283] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.19Å

e2oeiA1[A:253-285] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; X-RAY DIFFRACTION 1.270Å

e2idhD1[D:253-285] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4,SO4 ; X-RAY DIFFRACTION 2.19Å

e2idhA1[A:254-283] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4,SO4 ; X-RAY DIFFRACTION 2.19Å

e2idhH1[H:253-284] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.19Å

e2idhB1[B:254-284] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.19Å

e2idhC1[C:254-283] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4,SO4 ; X-RAY DIFFRACTION 2.19Å

e2idhE1[E:254-283] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Amyloid beta A4 protein-binding family B member 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.19Å

e2lb2A1[A:366-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE NEDD4-LIKE ; SOLUTION NMR

e2kbuA1[A:1-31] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; SOLUTION NMR

e2kykA1[A:1-39] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 UBIQUITIN-PROTEIN LIGASE ITCHY HOMOLOG ; SOLUTION NMR

e2lb0A1[A:235-267] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE SMURF1 ; SOLUTION NMR

e2lajA1[A:476-515] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE NEDD4-LIKE ; SOLUTION NMR

e3olmA2[A:385-422] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE RSP5 ; X-RAY DIFFRACTION 2.5Å

e2kpzA1[A:12-45] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase NEDD4 ; SOLUTION NMR

e2laxA1[A:170-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

YORKIE HOMOLOG ; SOLUTION NMR

e2lawA1[A:230-263] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

YORKIE HOMOLOG ; SOLUTION NMR

e2lb1A1[A:279-313] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase SMURF1 ; SOLUTION NMR

e1yiuA1[A:1-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Itchy E3 ubiquitin protein ligase ; SOLUTION NMR

e1wr3A1[A:1-36] Image Pymol Jmol Links: PDB, SCOP, CATH

ubiquitin-protein ligase Nedd4-2 ; SOLUTION NMR

e2yshA1[A:1-40] Image Pymol Jmol Links: PDB, SCOP, CATH

Growth-arrest-specific protein 7 ; SOLUTION NMR

e1wr7A1[A:1-41] Image Pymol Jmol Links: PDB, SCOP, CATH

Nedd4-2 ; SOLUTION NMR

e2djyA1[A:292-333] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Smad ubiquitination regulatory factor 2 ; SOLUTION NMR

e2op7A1[A:1-39] Image Pymol Jmol Links: PDB, SCOP, CATH

NEDD4-like E3 ubiquitin-protein ligase WWP1 ; SOLUTION NMR

e2nntA1[A:200-230] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLID-STATE NMR

e2ysiA1[A:1-40] Image Pymol Jmol Links: PDB, SCOP, CATH

Transcription elongation regulator 1 ; SOLUTION NMR

e2jxwA2[A:1-32] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WW domain-binding protein 4 ; SOLUTION NMR

e2ysfA1[A:1-40] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; SOLUTION NMR

e2kcfA1[A:1-36] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; SOLUTION NMR

e2jo9A1[A:5-35] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Itchy E3 ubiquitin protein ligase ; SOLUTION NMR

e2jocA1[A:1-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Itchy E3 ubiquitin protein ligase ; SOLUTION NMR

e2zqsA1[A:6-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PG ; X-RAY DIFFRACTION 1.902Å

e2zqtA1[A:6-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PG ; X-RAY DIFFRACTION 1.46Å

e2zquA1[A:6-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; X-RAY DIFFRACTION 2.5Å

e2zqvA1[A:6-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; X-RAY DIFFRACTION 2.498Å

e2zr4A1[A:6-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PG ; X-RAY DIFFRACTION 1.8Å

e2zr5A1[A:6-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PG ; X-RAY DIFFRACTION 2.6Å

e3kabA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 12P ; X-RAY DIFFRACTION 2.19Å

e3kadA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e3kafA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; X-RAY DIFFRACTION 2.30Å

e3kagA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e3kahA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 12P ; X-RAY DIFFRACTION 2.30Å

e3kaiA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e3kceA2[A:6-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e3odkA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: PE4 ; X-RAY DIFFRACTION 2.30Å

e2lb3A1[A:10-45] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e2lazA1[A:235-267] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE SMURF1 ; SOLUTION NMR

e2kq0A1[A:12-46] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase NEDD4 ; SOLUTION NMR

e2xp4A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.80Å

e2xp5A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e2xp6A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e2xp7A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 2.00Å

e2xp8A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 2.10Å

e2xp9A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e2xpaA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 1.90Å

e2xpbA2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 2.00Å

e3oobA2[A:6-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: KDH,PE4 ; X-RAY DIFFRACTION 1.900Å

e2layA1[A:170-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

YORKIE HOMOLOG ; SOLUTION NMR

e2l4jA1[A:177-222] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Yes-associated protein 2 (YAP2) ; SOLUTION NMR

e2ltvA1[A:230-265] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

YORKIE HOMOLOG ; SOLUTION NMR

e2ltwA1[A:170-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

YORKIE HOMOLOG ; SOLUTION NMR

e2ltxA1[A:280-314] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE SMURF1 ; SOLUTION NMR

e2ltzA1[A:297-333] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE SMURF2 ; SOLUTION NMR

e1ymzA1[A:1-38] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CC45 ; SOLUTION NMR

e2dmvA1[A:1-43] Image Pymol Jmol Links: PDB, SCOP, CATH

Itchy homolog E3 ubiquitin protein ligase ; SOLUTION NMR

e2ez5W1[W:521-566] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase NEDD4 ; SOLUTION NMR

e1wmvA1[A:1-54] Image Pymol Jmol Links: PDB, SCOP, CATH

WW domain containing oxidoreductase ; SOLUTION NMR

e2ysdA1[A:1-57] Image Pymol Jmol Links: PDB, SCOP, CATH

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 ; SOLUTION NMR

e2jx8A1[A:1-47] Image Pymol Jmol Links: PDB, SCOP, CATH

Phosphorylated CTD-interacting factor 1 ; SOLUTION NMR

e2yseA1[A:1-60] Image Pymol Jmol Links: PDB, SCOP, CATH

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 ; SOLUTION NMR

e2ysbA1[A:1-49] Image Pymol Jmol Links: PDB, SCOP, CATH

Salvador homolog 1 protein ; SOLUTION NMR

e4e5rA1[A:300-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MGC78846 protein ; X-RAY DIFFRACTION 1.9Å

e1e0mA1[A:1-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WWPROTOTYPE ; SOLUTION NMR

e3ntpA2[A:6-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: PE8 ; X-RAY DIFFRACTION 1.76Å

e2jxwA1[A:33-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WW domain-binding protein 4 ; SOLUTION NMR

e2dk7A1[A:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH

Transcription elongation regulator 1 ; SOLUTION NMR

e2jv4A1[A:1-53] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis/trans isomerase ; SOLUTION NMR

e2zajA1[A:1-49] Image Pymol Jmol Links: PDB, SCOP, CATH

Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 ; SOLUTION NMR

e2dwvA1[A:1-49] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Salvador homolog 1 protein ; SOLUTION NMR

e2rm0W1[W:1-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2yscA1[A:1-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Amyloid beta A4 precursor protein-binding family B member 3 ; SOLUTION NMR

e2e45A1[A:1-50] Image Pymol Jmol Links: PDB, SCOP, CATH

Amyloid beta A4 precursor protein-binding family B member 1 ; SOLUTION NMR

e1i5hW1[W:450-499] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

UBIQUITIN LIGASE NEDD4 ; SOLUTION NMR

e1jmqA1[A:5-50] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

65 KDA YES-ASSOCIATED PROTEIN ; SOLUTION NMR

e1e0lA1[A:1-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FORMIN BINDING PROTEIN ; SOLUTION NMR

e2jupW1[W:1-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2rlyW1[W:1-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2m9eA1[A:1-33] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e2m9fA1[A:1-33] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: NAG ; SOLUTION NMR

e2m9iA1[A:1-34] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e2m9jA1[A:1-34] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: NAG ; SOLUTION NMR

e2m3oW1[W:416-458] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE NEDD4 ; SOLUTION NMR

e4gwtA1[A:6-38] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: LMR ; X-RAY DIFFRACTION 2.250Å

e4gwvA1[A:6-38] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: FLC ; X-RAY DIFFRACTION 3.050Å

e2dwvB1[B:1-49] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Salvador homolog 1 protein ; SOLUTION NMR

e4n7fA1[A:1-454] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase NEDD4 ; X-RAY DIFFRACTION 1.1Å

e4n7fB1[B:1-454] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase NEDD4 ; X-RAY DIFFRACTION 1.1Å

e4n7hA1[A:421-453] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase NEDD4 ; ligands: GAI ; X-RAY DIFFRACTION 1.700Å

e1i8hB2[B:1-39] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e1nmvA4[A:1-39] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; SOLUTION NMR

e1tk7A4[A:1-42] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CG4244-PB ; SOLUTION NMR

e1tk7A1[A:43-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CG4244-PB ; SOLUTION NMR

e2f21A4[A:1-39] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PE ; X-RAY DIFFRACTION 1.5Å

e1f8aB4[B:1-43] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; X-RAY DIFFRACTION 1.84Å

e1yw5A4[A:1-62] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

peptidyl prolyl cis/trans isomerase ; X-RAY DIFFRACTION 1.6Å

e2m8iA1[A:1-43] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e2m8jA1[A:1-43] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; SOLUTION NMR

e2ltyA1[A:365-398] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE NEDD4-LIKE ; SOLUTION NMR

e1wr4A1[A:1-36] Image Pymol Jmol Links: PDB, SCOP, CATH

ubiquitin-protein ligase Nedd4-2 ; SOLUTION NMR

e2ysgA1[A:1-40] Image Pymol Jmol Links: PDB, SCOP, CATH

Syntaxin-binding protein 4 ; SOLUTION NMR

e2nntB1[B:300-330] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLID-STATE NMR

e2nntC1[C:400-430] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLID-STATE NMR

e2nntD1[D:500-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLID-STATE NMR

e3tdbA3[A:6-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: PE4 ; X-RAY DIFFRACTION 2.26Å

e3tczA3[A:6-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: PE4 ; X-RAY DIFFRACTION 2.1Å

e2itkA3[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: PE4 ; X-RAY DIFFRACTION 1.45Å

e2q5aA3[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 16P ; X-RAY DIFFRACTION 1.5Å

e2xp3A3[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 ; ligands: 12P ; X-RAY DIFFRACTION 2.00Å

e3tc5A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: P6G ; X-RAY DIFFRACTION 1.4Å

e4lcdA1[A:383-422] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RSP5 ; X-RAY DIFFRACTION 3.100Å

e4lcdB1[B:384-422] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase RSP5 ; X-RAY DIFFRACTION 3.100Å

e2mdiA1[A:1-56] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Histone-lysine N-methyltransferase SETD2 ; SOLUTION NMR

e2mdjA1[A:1-56] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Histone-lysine N-methyltransferase SETD2 ; SOLUTION NMR

e2mdcA1[A:9-56] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Histone-lysine N-methyltransferase SETD2 ; SOLUTION NMR

e2mptA1[A:478-509] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase NEDD4-like ; SOLUTION NMR

e3wh0A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: O4B ; X-RAY DIFFRACTION 1.6Å

e2mw9A1[A:432-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2mwaA1[A:431-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2mwbA1[A:431-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2mwdA1[A:433-460] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2mweA1[A:433-460] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2mwfA1[A:433-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e4rofA1[A:437-472] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; X-RAY DIFFRACTION 2.030Å

e4rofB1[B:437-472] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; X-RAY DIFFRACTION 2.030Å

e4roiA1[A:478-514] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4roiB1[B:476-514] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4rohA2[A:438-469] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4rohA1[A:470-517] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4rreA1[A:437-472] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4rreC1[C:435-474] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4rreE1[E:437-473] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4rreG1[G:437-473] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: UNX

e4qibA1[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: PE4 ; X-RAY DIFFRACTION 1.86Å

e4u84A1[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 15P ; X-RAY DIFFRACTION 1.78Å

e4u85A2[A:7-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; X-RAY DIFFRACTION 1.7Å

e4u86A2[A:6-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PG ; X-RAY DIFFRACTION 1.6Å

e4rexA1[A:161-208] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Yorkie homolog ; ligands: SO4 ; X-RAY DIFFRACTION 1.600Å

e5cq2A1[A:438-471] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.400Å

e5cq2A2[A:470-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.400Å

e5dzdA1[A:478-514] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.570Å

e5dwsA1[A:437-473] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.650Å

e5dwsC1[C:435-474] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.650Å

e5dwsE1[E:438-472] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.650Å

e5dwsG1[G:437-473] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.650Å

e2n4rA1[A:428-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2n4sA1[A:428-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2n4tA1[A:428-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2n4uA1[A:428-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2n4vA1[A:428-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e2n4wA1[A:428-464] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription elongation regulator 1 ; SOLUTION NMR

e5dzdB1[B:476-514] Image Pymol Jmol Links: PDB, SCOP, CATH

E3 ubiquitin-protein ligase Itchy homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.570Å

e2n1oA1[A:7-39] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; SOLUTION NMR

e5ahtA1[A:1-43] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 UBIQUITIN-PROTEIN LIGASE NEDD4 ; SOLUTION NMR

e2zr6A1[A:6-39] Image Pymol Jmol Links: PDB, SCOP, CATH

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PG ; X-RAY DIFFRACTION 3.2Å

e1zcnA2[A:7-39] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: 1PE ; X-RAY DIFFRACTION 1.9Å

e2nc3A1[A:1-33] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pin1 WW Domain ; ligands: ALL ; SOLUTION NMR

e2nc4A1[A:1-33] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pin1 WW Domain ; ligands: GAL ; SOLUTION NMR

e2nc5A1[A:1-33] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pin1 WW Domain ; ligands: XYP ; SOLUTION NMR

e2nc6A1[A:1-33] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pin1 WW Domain ; ligands: 4N2 ; SOLUTION NMR

e5b3zA3[A:1-36] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein ; X-RAY DIFFRACTION 2.3Å

e5b3zB3[B:3-36] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein ; X-RAY DIFFRACTION 2.3Å

e5b3zC3[C:2-36] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein ; X-RAY DIFFRACTION 2.3Å

e5b3zD3[D:3-36] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein ; X-RAY DIFFRACTION 2.3Å

e5uy9A2[A:6-28] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: PE4 ; X-RAY DIFFRACTION 1.85Å

e5tj7A2[A:335-363,A:394-395] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NEDD4-like E3 ubiquitin-protein ligase WWP2 ; X-RAY DIFFRACTION 2.600Å

e5ydyA1[A:8-61] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WW2 domain and PPxY motif complex ; SOLUTION NMR

e5ydxA1[A:7-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WW domain with PPxY motif ; SOLUTION NMR

e5vtiA1[A:6-36] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: CL ; X-RAY DIFFRACTION 1.80Å

e5vtjA1[A:6-38] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: SO4 ; X-RAY DIFFRACTION 1.50Å

e5vtkA1[A:6-38] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 ; ligands: CL ; X-RAY DIFFRACTION 1.99Å

e6j69A2[A:4-37] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein KIBRA ; X-RAY DIFFRACTION 2.753Å

e6j69A1[A:42-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein KIBRA ; X-RAY DIFFRACTION 2.753Å

e6j1yB2[B:492-532] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NEDD4-like E3 ubiquitin-protein ligase WWP1 ; X-RAY DIFFRACTION 2.50Å

e6j1yB3[B:417-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NEDD4-like E3 ubiquitin-protein ligase WWP1 ; X-RAY DIFFRACTION 2.50Å

Next

e3l4hA2[A:1015-1056] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

E3 UBIQUITIN-PROTEIN LIGASE HECW1 ; ligands: ACY ; X-RAY DIFFRACTION 1.8Å

e1eg3A1[A:47-84] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DYSTROPHIN ; X-RAY DIFFRACTION 2.0Å

e1o6wA1[A:30-75] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PRE-MRNA PROCESSING PROTEIN PRP40 ; SOLUTION NMR

e1ywiA1[A:15-42] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Formin-binding protein 3 ; SOLUTION NMR

e2dk1A1[A:7-44] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

WW domain-binding protein 4 ; SOLUTION NMR

e2jmfA1[A:521-553] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

E3 ubiquitin-protein ligase suppressor of deltex ; SOLUTION NMR

e2l5fA1[A:1-46] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

PRE-MRNA-PROCESSING FACTOR 40 HOMOLOG A ; SOLUTION NMR

e2l5fA2[A:47-92] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

PRE-MRNA-PROCESSING FACTOR 40 HOMOLOG A ; SOLUTION NMR

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes