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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

X: Nat/Ivy
H: Acyl-CoA N-acyltransferases (Nat)
T: Acyl-CoA N-acyltransferases (Nat)
F: Acetyltransf_13

PF13880 CL0257

Representatives:

e4mxeA1[A:648-836] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

N-acetyltransferase ESCO1 ; ligands: ACO ; X-RAY DIFFRACTION 2.60Å

e4mxeB1[B:648-836] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

N-acetyltransferase ESCO1 ; ligands: ACO ; X-RAY DIFFRACTION 2.60Å

e5t53A2[A:648-824] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

N-acetyltransferase ESCO1 ; ligands: ACO ; X-RAY DIFFRACTION 2.70Å

e5n1uA1[A:521-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: COA ; X-RAY DIFFRACTION 2.9760Å

e5n1uB1[B:521-702] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: COA ; X-RAY DIFFRACTION 2.9760Å

e5n1wA1[A:523-702] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: 8HB,MG ; X-RAY DIFFRACTION 2.3Å

e5n1wB1[B:525-702] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: 8HB,MG ; X-RAY DIFFRACTION 2.3Å

e5n22A1[A:521-702] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: 8HB ; X-RAY DIFFRACTION 1.99Å

e5n22B1[B:524-702] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: 8HB ; X-RAY DIFFRACTION 1.99Å

e5n22C1[C:521-702] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: 8HB ; X-RAY DIFFRACTION 1.99Å

e5n22D1[D:524-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

XEco2 ; ligands: 8HB ; X-RAY DIFFRACTION 1.99Å

e6sp0A2[A:415-590] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

N-acetyltransferase ESCO2 ; ligands: COA ; X-RAY DIFFRACTION 1.77Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes