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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

Keyword search

Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: Ribosomal protein L5
H: Ribosomal protein L5
T: Ribosomal protein L5
F: Ribosomal_L5,Ribosomal_L5_C

PF00281 PF00673

Representatives:

e1iq4A1[A:1-179] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5 ; X-RAY DIFFRACTION 1.8Å

e5dm7D1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.00Å

e5fl8J1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

e5apnJ1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e5apoJ1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e4wfnD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.54Å

e5dox1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.100Å

e5dox2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.100Å

e5doy1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S Ribosomal Protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e5doy2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S Ribosomal Protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e3jcdF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e3jceF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5e7k411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.200Å

e5e7k491[49:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.200Å

e5e81411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.950Å

e5el5411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.150Å

e5el5491[49:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.150Å

e5el6411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.100Å

e5el6491[49:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.100Å

e5el7411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.050Å

e5el7491[49:4-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.050Å

e5el4411[41:2-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.150Å

e5el4491[49:2-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.150Å

e5e81491[49:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.950Å

e5fdu1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: A,MG ; X-RAY DIFFRACTION 2.900Å

e5fdu2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: A,MG ; X-RAY DIFFRACTION 2.900Å

e5fdv1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: A,MG ; X-RAY DIFFRACTION 2.800Å

e5fdv2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: A,MG ; X-RAY DIFFRACTION 2.800Å

e5gadF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5gaeF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5gagF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5gahF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e3jbuf1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e3jbvf1[f:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L4 ; ELECTRON MICROSCOPY

e5f8k1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5f8k2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5gafF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e3jcjE1[E:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e3jcnF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5hau1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.000Å

e5hau2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.000Å

e5hcp1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.890Å

e5hcp2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.890Å

e5hcq1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5hcq2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5hcr1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5hcr2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5hd11G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å

e5hd12G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å

e5j4b1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e5j4b2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e5j4c1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5j4c2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5iqrE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5fciM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ligands: MG ; X-RAY DIFFRACTION 3.400Å

e5fcim11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.400Å

e5fcjM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.100Å

e5fcjm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.100Å

e5imqd1[d:1-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5imrd1[d:1-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5j4dH1[H:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.1Å

e5j4dMB1[MB:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.1Å

e5it7JJ1[JJ:6-173] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

KLLA0F08261p ; ELECTRON MICROSCOPY

e5ibb491[49:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.960Å

e5j8bG1[G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.590Å

e5ib7411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.990Å

e5ib8411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.130Å

e5ibb411[41:3-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.960Å

e5ib7491[49:2-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.990Å

e5ib8491[49:2-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.130Å

e3jctJ1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e5dc3M11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.250Å

e5dc3m11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.250Å

e5i4lM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.100Å

e5i4lm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.100Å

e4wt8CE1[CE:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.400Å

e4wt8DE1[DE:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.400Å

e5j88CF1[CF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.316Å

e5j88DF1[DF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.316Å

e5j8aCF1[CF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.1Å

e5j8aDF1[DF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.1Å

e5j91CF1[CF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.96Å

e5j91DF1[DF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.96Å

e5jc9CF1[CF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.03Å

e5jc9DF1[DF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.03Å

e3jcsD1[D:9-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ribosomal protein L5 ; ELECTRON MICROSCOPY

e5jteBF1[BF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5ju8BF1[BF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5l3pG1[G:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5it8CF1[CF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.117Å

e5it8DF1[DF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.117Å

e5j5bCF1[CF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.8Å

e5j5bDF1[DF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.8Å

e5j7lCF1[CF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.999Å

e5j7lDF1[DF:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 2.999Å

e4zsnRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.6Å

e4zsnYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.6Å

e5datM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.15Å

e5datm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.15Å

e5kpsE1[E:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5kpvD1[D:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5kpwD1[D:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5kpxD1[D:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5juoO1[O:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 (yeast L11) ; ELECTRON MICROSCOPY

e5jupO1[O:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 (yeast L11) ; ELECTRON MICROSCOPY

e5jusO1[O:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 (yeast L11) ; ELECTRON MICROSCOPY

e5jutO1[O:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 (yeast L11) ; ELECTRON MICROSCOPY

e5juuO1[O:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 (yeast L11) ; ELECTRON MICROSCOPY

e5dm8D1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH

e5czpYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e5czpRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e5dfeYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.09997551079Å

e5dfeRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.09997551079Å

e5j30RG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.200Å

e5j30YG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.200Å

e5j3cRG1[RG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.040Å

e5j3cYG1[YG:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 3.040Å

e5jvgD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.350Å

e5jvhD1[D:3-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.580Å

e5jcsJ1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e5lzaF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5lzbF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5lzcF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5lzdF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5lzeF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5lzfF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5lybM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG ; X-RAY DIFFRACTION 3.250Å

e5lybm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.250Å

e5tgaM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: C,MG,PRO ; X-RAY DIFFRACTION 3.300Å

e5tgam11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: C,MG,OHX,PRO ; X-RAY DIFFRACTION 3.300Å

e5lzsJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5lztJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5lzuJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5lzvJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5lzwJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5lzxJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5lzyJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5lzzJ1[J:8-107,J:127-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5dgfM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-A ; X-RAY DIFFRACTION 3.300Å

e5dgfm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-A ; X-RAY DIFFRACTION 3.300Å

e5dgvM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.100Å

e5dgvm11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-B ; X-RAY DIFFRACTION 3.100Å

e5mlcG1[G:16-194] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5, chloroplastic ; ELECTRON MICROSCOPY

e5mdvE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5mdwE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5mdzE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5mgpF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5mdyE1[E:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5hl7D1[D:5-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.550Å

e5li0G1[G:5-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5mmiF1[F:39-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

plastid ribosomal protein uL5c ; ELECTRON MICROSCOPY

e5mmmF1[F:39-231] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

plastid ribosomal protein uL5c ; ligands: MG ; ELECTRON MICROSCOPY

e5u4iF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5dgeM11[M1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-A ; X-RAY DIFFRACTION 3.450Å

e5dgem11[m1:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L11-A ; ligands: MG,OHX,PRO ; X-RAY DIFFRACTION 3.450Å

e5h4pJ1[J:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e5t2cq1[q:3-107,q:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e5t2aK1[K:13-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL5 ; ELECTRON MICROSCOPY

e5h5uF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5h1sH1[H:56-230] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5, chloroplastic ; ELECTRON MICROSCOPY

e5t62M1[M:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e5t6rM1[M:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-A ; ELECTRON MICROSCOPY

e5umdG1[G:8-166] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11a, putative ; ELECTRON MICROSCOPY

e5u9f071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5u9g071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5lksLJ1[LJ:3-107,LJ:127-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11 ; ELECTRON MICROSCOPY

e5hkvD1[D:5-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.64Å

e5ncoF1[F:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5tcuLK1[LK:2-167] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5uyk071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5uym071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5uyn071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5uyp071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5uyq071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5x8tF1[F:56-230] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5, chloroplastic ; ELECTRON MICROSCOPY

e5njtZ1[Z:2-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5np6d1[d:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5uyl071[07:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5x8pF1[F:56-230] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5, chloroplastic ; ELECTRON MICROSCOPY

e5vp21G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5vp22G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.800Å

e5meis1[s:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.500Å

e5meiCM1[CM:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.500Å

e5nd8G1[G:5-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5nd9G1[G:5-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5o60F1[F:6-187] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG,PHE ; ELECTRON MICROSCOPY

e5o61F1[F:6-187] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG,PHE ; ELECTRON MICROSCOPY

e5nwyS1[S:2-178] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5tbws1[s:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.000Å

e5tbwCM1[CM:6-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11-B ; ligands: MG,OHX ; X-RAY DIFFRACTION 3.000Å

e5o2rF1[F:1-177] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5nrgD1[D:5-116,D:155-179] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; X-RAY DIFFRACTION 3.442Å

e5xxbJ1[J:7-106,J:126-172] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein uL5 ; ELECTRON MICROSCOPY

e5w4k1G1[1G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å

e5w4k2G1[2G:2-182] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ligands: MG ; X-RAY DIFFRACTION 2.700Å

e5xy3J1[J:4-167] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L11, putative ; ELECTRON MICROSCOPY

e5v7qF1[F:12-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5v93F1[F:12-181] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

e5ng8AF1[AF:2-176] Image Pymol Jmol Links: PDB, SCOP, CATH

e5ng8BF1[BF:2-176] Image Pymol Jmol Links: PDB, SCOP, CATH

e5ngmAF1[AF:2-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L5 ; ELECTRON MICROSCOPY

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e1vqoD1[D:10-107,D:128-174] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L5P ; ligands: CL,NA ; X-RAY DIFFRACTION 2.2Å

e1vw4E1[E:19-292] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

X: ClpS-like

contains a HTH motif

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes