Home Help

X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


Keyword search


Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

X: cradle loop barrel

Refs: Structure 14, 1489-1498; Current opinion in structural biology 18, 358-365

X: SH3
H: SH3
T: SH3
F: LSM

PF01423 CL0010

Representatives:

e1th7A1[A:3-78] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

SMALL NUCLEAR RIBOPROTEIN PROTEIN ; X-RAY DIFFRACTION 1.68Å

e1ljoA1[A:1-75] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Archaeal Sm-like protein AF-Sm2 ; ligands: ACY ; X-RAY DIFFRACTION 1.95Å

e1d3bA1[A:4-75] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3) ; ligands: GOL ; X-RAY DIFFRACTION 2.000Å

e1d3bB1[B:7-87] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B) ; ligands: CIT,GOL ; X-RAY DIFFRACTION 2.000Å

e1b34A1[A:2-81] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1) ; X-RAY DIFFRACTION 2.5Å

e5mqff1[f:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated proteins B and B' ; ELECTRON MICROSCOPY

e5mqfm1[m:4-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated proteins B and B' ; ELECTRON MICROSCOPY

e5mqfc1[c:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5mqfj1[j:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5mqfa1[a:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5mqfg1[g:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5mqfn1[n:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5mqfb1[b:2-77] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5mqfi1[i:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5mqfd1[d:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5mqfk1[k:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5mqfh1[h:19-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5mqfe1[e:2-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5mqfl1[l:2-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5nrlo1[o:4-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm5 ; ELECTRON MICROSCOPY

e5nrlz1[z:11-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm6 ; ELECTRON MICROSCOPY

e5nrlj1[j:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm4 ; ELECTRON MICROSCOPY

e5nrl71[7:26-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm7 ; ELECTRON MICROSCOPY

e5nrl31[3:3-79] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm3 ; ELECTRON MICROSCOPY

e5nrlh1[h:1-48,h:78-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5nrll1[l:1-48,l:78-119,l:138-146] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5nrlt1[t:1-48,t:78-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5nrla1[a:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm2 ; ELECTRON MICROSCOPY

e5nrlf1[f:13-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5nrlq1[q:12-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5nrlx1[x:12-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5nrle1[e:10-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5nrlp1[p:10-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5nrlw1[w:10-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5nrlg1[g:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5nrlr1[r:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5nrly1[y:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5nrlb1[b:12-54,b:76-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY

e5nrlk1[k:12-54,k:76-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY

e5nrls1[s:12-54,s:76-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY

e5nrld1[d:4-86] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5nrln1[n:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5nrlv1[v:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5nrli1[i:17-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5nrlm1[m:17-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5nrlu1[u:17-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5xjcb1[b:4-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated proteins B and B' ; ELECTRON MICROSCOPY

e5xjci1[i:4-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated proteins B and B' ; ELECTRON MICROSCOPY

e5xjce1[e:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5xjcl1[l:14-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5xjca1[a:3-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5xjch1[h:3-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5xjcc1[c:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5xjcj1[j:1-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5xjcf1[f:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5xjcm1[m:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5xjcg1[g:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5xjcn1[n:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5xjcd1[d:20-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5xjck1[k:20-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5o9zb1[b:4-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5o9zd1[d:4-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5o9zk1[k:4-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5o9za1[a:26-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5o9zh1[h:26-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5o9zf1[f:7-86] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated proteins B and B' ; ELECTRON MICROSCOPY

e5o9zm1[m:7-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated proteins B and B' ; ELECTRON MICROSCOPY

e5o9zc1[c:15-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5o9zj1[j:15-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e5o9zg1[g:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5o9zn1[n:2-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e5o9zi1[i:4-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5o9ze1[e:4-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5o9zl1[l:4-74] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5xjlF1[F:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 2.5Å

e5xjlG1[G:8-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 2.5Å

e5xjlB1[B:22-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 2.5Å

e5vsuB1[B:-2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm2 ; X-RAY DIFFRACTION 3.100Å

e5vsuE1[E:1-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm5 ; X-RAY DIFFRACTION 3.100Å

e5vsuF1[F:10-86] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm6 ; X-RAY DIFFRACTION 3.100Å

e5vsuG1[G:26-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm7 ; X-RAY DIFFRACTION 3.100Å

e5vsuC1[C:-1-79] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm3 ; X-RAY DIFFRACTION 3.100Å

e5xjlE1[E:14-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; X-RAY DIFFRACTION 2.5Å

e5xjlA1[A:1-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; X-RAY DIFFRACTION 2.5Å

e5vsuD1[D:2-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm4 ; X-RAY DIFFRACTION 3.100Å

e6asoD1[D:2-44,D:69-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm4 ; X-RAY DIFFRACTION 2.711Å

e6asoF1[F:10-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm6 ; X-RAY DIFFRACTION 2.711Å

e6asoG1[G:26-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm7 ; X-RAY DIFFRACTION 2.711Å

e6asoC1[C:1-79] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm3 ; X-RAY DIFFRACTION 2.711Å

e6asoB1[B:1-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm2 ; X-RAY DIFFRACTION 2.711Å

e6asoE1[E:7-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U6 snRNA-associated Sm-like protein LSm5 ; X-RAY DIFFRACTION 2.711Å

e5uz5L1[L:1-119] Image Pymol Jmol Links: PDB, SCOP, CATH

e5uz5P1[P:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH

e5uz5O1[O:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH

e5uz5Q1[Q:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH

e5uz5M1[M:13-108] Image Pymol Jmol Links: PDB, SCOP, CATH

e5uz5N1[N:5-96] Image Pymol Jmol Links: PDB, SCOP, CATH

e5mknd1[d:1-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mklB11[B1:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e6exnh1[h:1-48,h:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e6exng1[g:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e6exnb1[b:4-55,b:75-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY

e6exnq1[q:12-84] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e6exnp1[p:10-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e6exnd1[d:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e6exnl1[l:1-101] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e6exnj1[j:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5uz5K1[K:3-101] Image Pymol Jmol Links: PDB, SCOP, CATH

e6exnf1[f:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e6exnr1[r:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e6exne1[e:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e6exnk1[k:12-54,k:76-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY

e6exnn1[n:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e6exnm1[m:17-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5mkiA1[A:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.048Å

e5mkiB1[B:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.048Å

e5mkiC1[C:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiD1[D:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiE1[E:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiF1[F:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiG1[G:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiH1[H:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; X-RAY DIFFRACTION 2.048Å

e5mkiI1[I:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiJ1[J:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiK1[K:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA ; X-RAY DIFFRACTION 2.048Å

e5mkiL1[L:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA,EPE ; X-RAY DIFFRACTION 2.048Å

e5mkiM1[M:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: CA,EPE ; X-RAY DIFFRACTION 2.048Å

e5mkiN1[N:3-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Like-Sm ribonucleoprotein core ; ligands: EPE ; X-RAY DIFFRACTION 2.048Å

e5mknA1[A:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknB1[B:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknC1[C:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknD1[D:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknE1[E:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknF1[F:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknG1[G:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknH1[H:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknI1[I:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknJ1[J:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknK1[K:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknL1[L:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknM1[M:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknN1[N:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknO1[O:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknP1[P:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknQ1[Q:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknR1[R:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknT1[T:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknU1[U:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknV1[V:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknW1[W:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknX1[X:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mknY1[Y:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknZ1[Z:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: PG4,U5P ; X-RAY DIFFRACTION 2.55Å

e5mkna1[a:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mknb1[b:2-72] Image Pymol Jmol Links: PDB, SCOP, CATH

Like-Sm ribonucleoprotein core ; ligands: U5P ; X-RAY DIFFRACTION 2.55Å

e5mklA11[A1:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklC11[C1:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklD11[D1:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklE11[E1:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklF11[F1:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklG11[G1:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklA21[A2:5-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklB21[B2:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklC21[C2:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklD21[D2:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklE21[E2:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklF21[F2:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklG21[G2:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklA31[A3:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklB31[B3:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklC31[C3:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklD31[D3:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklE31[E3:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklF31[F3:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklG31[G3:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklA41[A4:4-82] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklB41[B4:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklC41[C4:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklD41[D4:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklE41[E4:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklF41[F4:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e5mklG41[G4:4-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sm ribonucleo ; X-RAY DIFFRACTION 2.085Å

e6bk8h1[h:1-48,h:76-109] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e6bk8p1[p:1-48,p:76-106] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D1 ; ELECTRON MICROSCOPY

e6bk8b1[b:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e6bk8m1[m:12-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e6bk8d1[d:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e6bk8n1[n:2-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e6bk8g1[g:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e6bk8o1[o:4-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e6bk8f1[f:4-53,f:77-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY

e6bk8k1[k:4-53,k:77-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein-associated protein B ; ELECTRON MICROSCOPY

e6bk8c1[c:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e6bk8l1[l:10-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein E ; ELECTRON MICROSCOPY

e6bk8a1[a:15-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e6bk8q1[q:16-108] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

e5z56a1[a:3-85] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D3 ; ELECTRON MICROSCOPY

e5xjqF1[F:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; X-RAY DIFFRACTION 3.28Å

e5yzgm1[m:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5z56f1[f:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein F ; ELECTRON MICROSCOPY

e5xjqG1[G:10-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; X-RAY DIFFRACTION 3.28Å

e5yzgg1[g:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5z56g1[g:3-76] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein G ; ELECTRON MICROSCOPY

e5xjqB1[B:13-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; X-RAY DIFFRACTION 3.28Å

e5yzgk1[k:20-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Small nuclear ribonucleoprotein Sm D2 ; ELECTRON MICROSCOPY

Previous Next

e1b34B1[B:26-73,B:93-118] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

PROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2) ; X-RAY DIFFRACTION 2.5Å

e1n9rA1[A:19-86] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

SMALL NUCLEAR RIBONUCLEOPROTEIN F ; X-RAY DIFFRACTION 2.8Å

e4m75A1[A:32-172] nonrep Image Pymol Jmol Links: PDB, SCOP, CATHDOI

U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM1 ; X-RAY DIFFRACTION 2.95Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes