Home Help

X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

Keyword search

Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

X: Flavodoxin-like
H: Succinyl-CoA synthetase domains
T: Succinyl-CoA synthetase domains
F: Citrate_bind

PF16114 CL0506

Representatives:

e3mwdA2[A:246-425] * nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-CITRATE SYNTHASE ; ligands: CIT ; X-RAY DIFFRACTION 2.1Å

e3pffA2[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: MG,TLA ; X-RAY DIFFRACTION 2.3Å

e3mweA2[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-CITRATE SYNTHASE ; ligands: MG,TLA ; X-RAY DIFFRACTION 2.2Å

e5tdeA2[A:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 2HP,FLC,GOL,NA ; X-RAY DIFFRACTION 1.700Å

e5tdfA2[A:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 7A3,GOL,MG ; X-RAY DIFFRACTION 1.800Å

e5tdmA1[A:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 7A2,MG ; X-RAY DIFFRACTION 2.100Å

e5tdzA1[A:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: GOL,PO4,TLA ; X-RAY DIFFRACTION 2.000Å

e5tesA2[A:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: FLC,MG ; X-RAY DIFFRACTION 2.400Å

e5tetA2[A:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 7A3,PO4 ; X-RAY DIFFRACTION 2.200Å

e5te1A1[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 7A2,NA,PO4 ; X-RAY DIFFRACTION 2.25Å

e5te1B1[B:246-426] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 7A2,NA,PO4 ; X-RAY DIFFRACTION 2.25Å

e5teqA1[A:246-424] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: FLC,NA,PO4 ; X-RAY DIFFRACTION 2.3Å

e5teqB4[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: FLC,NA,PO4 ; X-RAY DIFFRACTION 2.3Å

e6hxqB1[B:235-410] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Citryl-CoA synthetase large subunit ; ligands: FLC ; X-RAY DIFFRACTION 2.91Å

e6hxjA1[A:228-398] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate lyase beta-subunit ; ligands: COA,FLC ; X-RAY DIFFRACTION 2.58Å

e6hxiA1[A:244-419] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Citrate lyase, subunit 1 ; ligands: COA,FLC,NA ; X-RAY DIFFRACTION 2.10Å

e6hxqD2[D:235-410] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Citryl-CoA synthetase large subunit ; X-RAY DIFFRACTION 2.91Å

e6hxiC2[C:244-419] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Citrate lyase, subunit 1 ; ligands: COA,FLC,NA ; X-RAY DIFFRACTION 2.10Å

e6hxjC1[C:228-398] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate lyase beta-subunit ; ligands: FLC,TRS ; X-RAY DIFFRACTION 2.58Å

e6hxjE1[E:228-398] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate lyase beta-subunit ; ligands: COA,FLC ; X-RAY DIFFRACTION 2.58Å

e6hxjG1[G:228-398] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate lyase beta-subunit ; ligands: COA,FLC ; X-RAY DIFFRACTION 2.58Å

e6hxhA3[A:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6hxhB3[B:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6hxhC3[C:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6hxhD3[D:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6hxhE3[E:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6hxhF3[F:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6hxhG3[G:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6hxhH3[H:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase,Human ATP citrate lyase ; ligands: COA,FLC,MG,PO4 ; X-RAY DIFFRACTION 3.30Å

e6qfbA3[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 2HP ; X-RAY DIFFRACTION 3.25Å

e6qfbB3[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 2HP,COA,FLC,MG ; X-RAY DIFFRACTION 3.25Å

e6qfbC3[C:246-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; X-RAY DIFFRACTION 3.25Å

e6qfbD3[D:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: 2HP ; X-RAY DIFFRACTION 3.25Å

e6uuwA4[A:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: QHD ; ELECTRON MICROSCOPY

e6uuwB4[B:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: QHD ; ELECTRON MICROSCOPY

e6uuwC4[C:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: QHD ; ELECTRON MICROSCOPY

e6uuwD4[D:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: QHD ; ELECTRON MICROSCOPY

e6poeA4[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6poeB4[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6poeC4[C:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6poeD4[D:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6pofA4[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6pofB4[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6pofC4[C:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6pofD4[D:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6ui9A4[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ACLY ; ligands: ACO,OAA ; ELECTRON MICROSCOPY

e6ui9B4[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ACLY ; ligands: OAA ; ELECTRON MICROSCOPY

e6ui9C4[C:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ACLY ; ligands: OAA ; ELECTRON MICROSCOPY

e6ui9D4[D:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ACLY ; ligands: ACO,OAA ; ELECTRON MICROSCOPY

e6uiaC4[C:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uiaD4[D:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uiaA4[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uiaB4[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uuzA4[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uuzB4[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uuzC4[C:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uuzD4[D:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e6uv5A4[A:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP citrate lyase ; ligands: OAA ; ELECTRON MICROSCOPY

e6uv5B4[B:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP citrate lyase ; ligands: OAA ; ELECTRON MICROSCOPY

e6uv5C4[C:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP citrate lyase ; ligands: OAA ; ELECTRON MICROSCOPY

e6uv5D4[D:246-425] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP citrate lyase ; ligands: ACO,OAA ; ELECTRON MICROSCOPY

e6o0hA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: LBG ; ELECTRON MICROSCOPY

e6o0hB4[B:246-425,B:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: LBG ; ELECTRON MICROSCOPY

e6o0hC4[C:246-425,C:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: LBG ; ELECTRON MICROSCOPY

e6o0hD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: LBG ; ELECTRON MICROSCOPY

e7llaA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: OAA ; ELECTRON MICROSCOPY

e7lj9D4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: OAA ; ELECTRON MICROSCOPY

e7llaB4[B:246-425,B:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: OAA ; ELECTRON MICROSCOPY

e7llaC4[C:246-425,C:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: OAA ; ELECTRON MICROSCOPY

e7llaD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: OAA ; ELECTRON MICROSCOPY

e7liwB4[B:246-431] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: COA,Y2A ; ELECTRON MICROSCOPY

e6znwA2[A:243-419] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Citrate lyase, subunit 1 ; ligands: FLC,MG,PO4 ; X-RAY DIFFRACTION 2.12Å

e8g1eA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e8g1eB4[B:246-425,B:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g1eC4[C:246-425,C:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g1eD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g1fA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g1fB4[B:246-425,B:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g1fC4[C:246-425,C:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g1fD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g5cA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e8g5dD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e7rigA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e7rigB4[B:246-425,B:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e7rigC4[C:246-425,C:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e7rigD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e7rkzA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: Q5B ; ELECTRON MICROSCOPY

e7rkzB4[B:246-425,B:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: Q5B ; ELECTRON MICROSCOPY

e7rkzC4[C:246-425,C:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e7rkzD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: Q5B ; ELECTRON MICROSCOPY

e7rmpA4[A:246-425,A:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e7rmpB4[B:246-425,B:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

e7rmpC4[C:246-425,C:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ELECTRON MICROSCOPY

e7rmpD4[D:246-425,D:487-491] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ATP-citrate synthase ; ligands: PO4,Q5B ; ELECTRON MICROSCOPY

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes