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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: RNA_pol_Rpb4

PF03874 CL0426

Representatives:

e1go3F1[F:1-107] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE SUBUNIT F ; X-RAY DIFFRACTION 1.750Å

e8oevD1[D:60-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e2pmzF1[F:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit F ; X-RAY DIFFRACTION 3.400Å

e3hkzF1[F:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase, subunit F (RpoF) ; X-RAY DIFFRACTION 3.4Å

e8oewD1[D:60-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8of0D1[D:60-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e2pmzU1[U:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit F ; X-RAY DIFFRACTION 3.400Å

e3hkzR1[R:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase, subunit F (RpoF) ; X-RAY DIFFRACTION 3.4Å

e8p4bD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8p4cD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e2y0sF1[F:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA POLYMERASE SUBUNIT 7 ; X-RAY DIFFRACTION 3.79Å

e2y0sU1[U:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA POLYMERASE SUBUNIT 7 ; X-RAY DIFFRACTION 3.79Å

e8p4dD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8b3fD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e2waqF1[F:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE RPO4 SUBUNIT ; X-RAY DIFFRACTION 3.35Å

e2wb1F1[F:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE RPO4 SUBUNIT ; X-RAY DIFFRACTION 3.52Å

e8p4fD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8he5D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e2wb1U1[U:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE RPO4 SUBUNIT ; X-RAY DIFFRACTION 3.52Å

e8jh2D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8jh3D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8jh4D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7wbwD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7wbxD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e1go3N1[N:2-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE SUBUNIT F ; X-RAY DIFFRACTION 1.750Å

e1y14C1[C:46-77,C:118-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION

e2c35G1[G:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å

e2c35C1[C:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å

e2c35E1[E:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å

e3ayhA1[A:-4-129] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9 ; ligands: SO4 ; X-RAY DIFFRACTION 2.19Å

e3h0gD1[D:6-135] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit rpb4 ; X-RAY DIFFRACTION 3.650Å

e4bbrD1[D:3-76,D:118-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å

e3j0kD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II 32 kDa polypeptide ; ELECTRON MICROSCOPY

e4a3gD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å

e4a93D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å

e1wcmD1[D:4-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.8Å

e1y1vD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION

e1y1yD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION 4Å

e1y1wD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.0Å

e1y77D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.5Å

e2b63D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.8Å

e2b8kD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.15Å

e2ja5D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.800Å

e2ja6D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.00Å

e2ja7D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.80Å

e2ja7P1[P:4-71,P:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.80Å

e2ja8D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.80Å

e2r7zD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.80Å

e2vumD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å

e3fkiD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.88Å

e2r92D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.800Å

e2r93D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.0Å

e3h0gP1[P:6-135] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit rpb4 ; X-RAY DIFFRACTION 3.650Å

e3h3vE1[E:4-71,E:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.000Å

e3hoyD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.4Å

e3houD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.2Å

e3houP1[P:3-71,P:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.2Å

e3hovD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.5Å

e3howD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.6Å

e3hoxD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.65Å

e3hozD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.65Å

e3i4mD1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.7Å

e3i4nD1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.9Å

e3k1fD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 4.3Å

e3po3D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ligands: ACT ; X-RAY DIFFRACTION 3.3Å

e3po2D1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ligands: EPE ; X-RAY DIFFRACTION 3.3Å

e3qt1D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.3Å

e4a3cD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å

e4a3bD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å

e4a3dD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å

e4a3eD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å

e4a3fD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å

e4a3jD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.7Å

e4a3kD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å

e4a3lD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å

e4a3mD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.90Å

e3j1nD1[D:4-76,D:118-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e1pqvD1[D:86-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION 3.80Å

e1nt9D1[D:10-24,D:140-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

YEAST DNA-DIRECTED RNA POLYMERASE II 32 KD POLYPEPTIDE ; X-RAY DIFFRACTION 4.2Å

e4aybF1[F:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE ; X-RAY DIFFRACTION 3.20Å

e4b1pU1[U:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4b1oF1[F:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4bxxD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.28Å

e4bxzD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 4.80Å

e4by1D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.60Å

e4by7D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ligands: EPE ; X-RAY DIFFRACTION 3.15Å

e4a3iD2[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.80Å

e4bbsD2[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.6Å

e4qiwF1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase, subunit F ; X-RAY DIFFRACTION 3.5Å

e4qiwR1[R:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase, subunit F ; X-RAY DIFFRACTION 3.5Å

e4qjfB1[B:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA-directed RNA polymerase, subunit F ; X-RAY DIFFRACTION 2.3Å

e4v1nD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ELECTRON MICROSCOPY

e4v1oD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ligands: ZN ; ELECTRON MICROSCOPY

e4v8sAU1[AU:3-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA POLYMERASE SUBUNIT 4 ; X-RAY DIFFRACTION 4.30Å

e4v8sBF1[BF:3-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA POLYMERASE SUBUNIT 4 ; X-RAY DIFFRACTION 4.30Å

e5c3eD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.400Å

e5c44D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.852Å

e5c4aD1[D:14-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.2Å

e5c4xD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.0Å

e5fmfD1[D:3-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 ; ELECTRON MICROSCOPY

e5flmD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ELECTRON MICROSCOPY

e5ip7D1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.520Å

e5ip9D1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.450Å

e5iy6D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5iy7D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5iy8D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5iy9D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5iyaD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5iybD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5iycD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5iydD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5svaD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5u0sd1[d:6-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit Rpb4 ; ELECTRON MICROSCOPY

e5u5qD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.80Å

e5x4zD1[D:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.800Å

e5x4zP1[P:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.800Å

e5x50D1[D:23-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 4.290Å

e5x51D1[D:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.000Å

e5x51P1[P:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.000Å

e5xogD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 3.000Å

e5xonD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e5oikD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Polymerase (RNA) II (DNA directed) polypeptide D ; ELECTRON MICROSCOPY

e5oqjD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5oqmD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5ot2D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.2Å

e5vvrD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e5vvsD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e6eu0D1[D:1-71,D:98-160] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6eu2D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6eu3D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6f40D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6f41D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6f42D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6f44D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6eu1D1[D:1-71,D:98-160] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6exvD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 ; ELECTRON MICROSCOPY

e6gmhD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit D ; ELECTRON MICROSCOPY

e6gmlD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit D ; ELECTRON MICROSCOPY

e6a5lD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6cnbD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6cncD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6cndD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6cnfD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6a5oD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6a5pD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6a5rD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6a5tD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6a5uD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6a5vD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH

e6gykD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e6gylD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e6gymD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e6i84D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e6ir9D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6j4wD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6j4xD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6j4yD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6j4zD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6j50D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6j51D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6inqD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY

e6o9lD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e6drdD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e6tutD1[D:1-28,D:49-67,D:103-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6kf3F1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase, subunit F ; ELECTRON MICROSCOPY

e6kf4F1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase, subunit F ; ELECTRON MICROSCOPY

e6kf9F1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase, subunit F ; ELECTRON MICROSCOPY

e6tedD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit D ; ELECTRON MICROSCOPY

e7b0yD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit D ; ELECTRON MICROSCOPY

e7a6hD1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7ae1D1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7ae3D1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7aeaD1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7astI1[I:1-125] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7d58D1[D:1-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7d59D1[D:1-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7dn3D1[D:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e6xreD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7lbmD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7du2D1[D:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY

e7edxr1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7eg7r1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7eg8r1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7eg9r1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7egar1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7egbr1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7nvrD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPOL4c domain-containing protein ; ELECTRON MICROSCOPY

e7nvsD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPOL4c domain-containing protein ; ELECTRON MICROSCOPY

e7nvtD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPOL4c domain-containing protein ; ELECTRON MICROSCOPY

e7nvuD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPOL4c domain-containing protein ; ELECTRON MICROSCOPY

e7nvyD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPOL4c domain-containing protein ; ELECTRON MICROSCOPY

e7nvzD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPOL4c domain-containing protein ; ELECTRON MICROSCOPY

e7nw0D1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPOL4c domain-containing protein ; ELECTRON MICROSCOPY

e7enaPD1[PD:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7o4iD1[D:11-71,D:131-220] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7egcr1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7nkyD1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7encPD1[PD:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7f4gD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7o4kD1[D:13-71,D:131-220] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

e7o4jD1[D:11-71,D:131-220] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY

Next

e2c35A1[A:14-142] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å

e2ckzC1[C:1-160] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE III 18 KD POLYPEPTIDE ; X-RAY DIFFRACTION 3.200Å

e1y14A1[A:46-74,A:118-221] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

T: PAP/OAS1 substrate-binding domain

the fourth helix changed to strands

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes