Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices




Representatives:
e1go3F1[F:1-107]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DNA-DIRECTED RNA POLYMERASE SUBUNIT F ; X-RAY DIFFRACTION 1.750Å
e8oevD1[D:60-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e2pmzF1[F:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase subunit F ; X-RAY DIFFRACTION 3.400Å
e3hkzF1[F:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase, subunit F (RpoF) ; X-RAY DIFFRACTION 3.4Å
e8oewD1[D:60-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8of0D1[D:60-180] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e2pmzU1[U:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase subunit F ; X-RAY DIFFRACTION 3.400Å
e3hkzR1[R:1-89] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase, subunit F (RpoF) ; X-RAY DIFFRACTION 3.4Å
e8p4bD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8p4cD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e2y0sF1[F:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA POLYMERASE SUBUNIT 7 ; X-RAY DIFFRACTION 3.79Å
e2y0sU1[U:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA POLYMERASE SUBUNIT 7 ; X-RAY DIFFRACTION 3.79Å
e8p4dD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8b3fD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH
; ELECTRON MICROSCOPY
e2waqF1[F:3-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE RPO4 SUBUNIT ; X-RAY DIFFRACTION 3.35Å
e2wb1F1[F:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE RPO4 SUBUNIT ; X-RAY DIFFRACTION 3.52Å
e8p4fD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8he5D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e2wb1U1[U:3-93] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE RPO4 SUBUNIT ; X-RAY DIFFRACTION 3.52Å
e8jh2D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8jh3D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8jh4D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e7wbwD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e7wbxD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e1go3N1[N:2-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE SUBUNIT F ; X-RAY DIFFRACTION 1.750Å
e1y14C1[C:46-77,C:118-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION
e2c35G1[G:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å
e2c35C1[C:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å
e2c35E1[E:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å
e3ayhA1[A:-4-129] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9 ; ligands: SO4 ; X-RAY DIFFRACTION 2.19Å
e3h0gD1[D:6-135] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit rpb4 ; X-RAY DIFFRACTION 3.650Å
e4bbrD1[D:3-76,D:118-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å
e3j0kD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II 32 kDa polypeptide ; ELECTRON MICROSCOPY
e4a3gD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å
e4a93D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å
e1wcmD1[D:4-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.8Å
e1y1vD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION
e1y1yD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION 4Å
e1y1wD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.0Å
e1y77D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.5Å
e2b63D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.8Å
e2b8kD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.15Å
e2ja5D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.800Å
e2ja6D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 4.00Å
e2ja7D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.80Å
e2ja7P1[P:4-71,P:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.80Å
e2ja8D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II 32KDA POLYPEPTIDE ; X-RAY DIFFRACTION 3.80Å
e2r7zD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.80Å
e2vumD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å
e3fkiD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.88Å
e2r92D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.800Å
e2r93D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.0Å
e3h0gP1[P:6-135] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit rpb4 ; X-RAY DIFFRACTION 3.650Å
e3h3vE1[E:4-71,E:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.000Å
e3hoyD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.4Å
e3houD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.2Å
e3houP1[P:3-71,P:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.2Å
e3hovD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.5Å
e3howD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.6Å
e3hoxD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.65Å
e3hozD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.65Å
e3i4mD1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.7Å
e3i4nD1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.9Å
e3k1fD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 4.3Å
e3po3D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ligands: ACT ; X-RAY DIFFRACTION 3.3Å
e3po2D1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ligands: EPE ; X-RAY DIFFRACTION 3.3Å
e3qt1D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.3Å
e4a3cD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å
e4a3bD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å
e4a3dD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å
e4a3eD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.40Å
e4a3fD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å
e4a3jD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.7Å
e4a3kD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å
e4a3lD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.50Å
e4a3mD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.90Å
e3j1nD1[D:4-76,D:118-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e1pqvD1[D:86-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II 32 kDa polypeptide ; X-RAY DIFFRACTION 3.80Å
e1nt9D1[D:10-24,D:140-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
YEAST DNA-DIRECTED RNA POLYMERASE II 32 KD POLYPEPTIDE ; X-RAY DIFFRACTION 4.2Å
e4aybF1[F:3-110] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE ; X-RAY DIFFRACTION 3.20Å
e4b1pU1[U:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4b1oF1[F:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4bxxD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.28Å
e4bxzD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 4.80Å
e4by1D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.60Å
e4by7D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ligands: EPE ; X-RAY DIFFRACTION 3.15Å
e4a3iD2[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.80Å
e4bbsD2[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; X-RAY DIFFRACTION 3.6Å
e4qiwF1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase, subunit F ; X-RAY DIFFRACTION 3.5Å
e4qiwR1[R:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase, subunit F ; X-RAY DIFFRACTION 3.5Å
e4qjfB1[B:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA-directed RNA polymerase, subunit F ; X-RAY DIFFRACTION 2.3Å
e4v1nD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ELECTRON MICROSCOPY
e4v1oD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ligands: ZN ; ELECTRON MICROSCOPY
e4v8sAU1[AU:3-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA POLYMERASE SUBUNIT 4 ; X-RAY DIFFRACTION 4.30Å
e4v8sBF1[BF:3-107] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA POLYMERASE SUBUNIT 4 ; X-RAY DIFFRACTION 4.30Å
e5c3eD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.400Å
e5c44D1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.852Å
e5c4aD1[D:14-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.2Å
e5c4xD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 4.0Å
e5fmfD1[D:3-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA POLYMERASE II PRE-INITIATION COMPLEX, RPB4 ; ELECTRON MICROSCOPY
e5flmD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4 ; ELECTRON MICROSCOPY
e5ip7D1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.520Å
e5ip9D1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.450Å
e5iy6D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5iy7D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5iy8D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5iy9D1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5iyaD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5iybD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5iycD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5iydD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5svaD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5u0sd1[d:6-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit Rpb4 ; ELECTRON MICROSCOPY
e5u5qD1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.80Å
e5x4zD1[D:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.800Å
e5x4zP1[P:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.800Å
e5x50D1[D:23-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 4.290Å
e5x51D1[D:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.000Å
e5x51P1[P:4-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 7.000Å
e5xogD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; X-RAY DIFFRACTION 3.000Å
e5xonD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e5oikD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Polymerase (RNA) II (DNA directed) polypeptide D ; ELECTRON MICROSCOPY
e5oqjD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5oqmD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5ot2D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; X-RAY DIFFRACTION 3.2Å
e5vvrD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e5vvsD1[D:4-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e6eu0D1[D:1-71,D:98-160] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6eu2D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6eu3D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6f40D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6f41D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6f42D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6f44D1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6eu1D1[D:1-71,D:98-160] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6exvD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 ; ELECTRON MICROSCOPY
e6gmhD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit D ; ELECTRON MICROSCOPY
e6gmlD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit D ; ELECTRON MICROSCOPY
e6a5lD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6cnbD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6cncD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6cndD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6cnfD1[D:1-71,D:98-161] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6a5oD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6a5pD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6a5rD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6a5tD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6a5uD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6a5vD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH
e6gykD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e6gylD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e6gymD1[D:24-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e6i84D1[D:3-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e6ir9D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6j4wD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6j4xD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6j4yD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6j4zD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6j50D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6j51D1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6inqD1[D:3-185] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit B32 ; ELECTRON MICROSCOPY
e6o9lD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e6drdD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e6tutD1[D:1-28,D:49-67,D:103-159] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6kf3F1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase, subunit F ; ELECTRON MICROSCOPY
e6kf4F1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase, subunit F ; ELECTRON MICROSCOPY
e6kf9F1[F:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase, subunit F ; ELECTRON MICROSCOPY
e6tedD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RNA polymerase II subunit D ; ELECTRON MICROSCOPY
e7b0yD1[D:14-139] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit D ; ELECTRON MICROSCOPY
e7a6hD1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7ae1D1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7ae3D1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7aeaD1[D:1-124] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7astI1[I:1-125] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7d58D1[D:1-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7d59D1[D:1-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7dn3D1[D:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e6xreD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7lbmD1[D:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7du2D1[D:1-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase III subunit RPC9 ; ELECTRON MICROSCOPY
e7edxr1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7eg7r1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7eg8r1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7eg9r1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7egar1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7egbr1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7nvrD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RPOL4c domain-containing protein ; ELECTRON MICROSCOPY
e7nvsD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RPOL4c domain-containing protein ; ELECTRON MICROSCOPY
e7nvtD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RPOL4c domain-containing protein ; ELECTRON MICROSCOPY
e7nvuD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RPOL4c domain-containing protein ; ELECTRON MICROSCOPY
e7nvyD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RPOL4c domain-containing protein ; ELECTRON MICROSCOPY
e7nvzD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RPOL4c domain-containing protein ; ELECTRON MICROSCOPY
e7nw0D1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RPOL4c domain-containing protein ; ELECTRON MICROSCOPY
e7enaPD1[PD:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7o4iD1[D:11-71,D:131-220] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7egcr1[r:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7nkyD1[D:1-71,D:131-221] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7encPD1[PD:14-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7f4gD1[D:14-141] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7o4kD1[D:13-71,D:131-220] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
e7o4jD1[D:11-71,D:131-220] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA-directed RNA polymerase II subunit RPB4 ; ELECTRON MICROSCOPY
Nexte2c35A1[A:14-142]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.700Å

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes