Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich




Representatives:
e2bbaA1[A:17-196]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
EPHRIN TYPE-B RECEPTOR 4 ; ligands: SO4 ; X-RAY DIFFRACTION 1.65Å
e1kgyB1[B:228-404] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-B RECEPTOR 2 ; X-RAY DIFFRACTION 2.7Å
e1nukA1[A:28-203] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
PROTEIN (TYROSINE-PROTEIN KINASE RECEPTOR EPH) ; X-RAY DIFFRACTION 2.9Å
e1kgyC1[C:428-604] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-B RECEPTOR 2 ; X-RAY DIFFRACTION 2.7Å
e1shwB1[B:228-404] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-B receptor 2 ; X-RAY DIFFRACTION 2.0Å
e1kgyA1[A:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-B RECEPTOR 2 ; X-RAY DIFFRACTION 2.7Å
e2hleA1[A:17-196] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-B RECEPTOR 4 ; X-RAY DIFFRACTION 2.05Å
e1kgyD1[D:628-804] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-B RECEPTOR 2 ; X-RAY DIFFRACTION 2.7Å
e2wo1A1[A:27-209] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR ; ligands: POL ; X-RAY DIFFRACTION 1.85Å
e3nruA1[A:32-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3p1iA1[A:38-211] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN TYPE-B RECEPTOR 3 ; ligands: SO4 ; X-RAY DIFFRACTION 2.1Å
e3skjE1[E:1-176] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e2qbxA1[A:28-203] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-B RECEPTOR 2 ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3ckhA1[A:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; X-RAY DIFFRACTION 2.300Å
e2qbxB1[B:28-203] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-B RECEPTOR 2 ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3c8xA1[A:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 1.950Å
e3czuA1[A:27-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 2 ; X-RAY DIFFRACTION 2.65Å
e3ckhB1[B:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; X-RAY DIFFRACTION 2.300Å
e3etpA1[A:21-207] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-B receptor 2 ; X-RAY DIFFRACTION 2Å
e3heiA1[A:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3heiC1[C:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3heiE1[E:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3heiG1[G:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3heiI1[I:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3heiK1[K:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3heiM1[M:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3heiO1[O:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.000Å
e3hpnA1[A:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e3hpnB1[B:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e3hpnC1[C:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e3hpnD1[D:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e3hpnE1[E:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e3hpnF1[F:1-174] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e3gxuA1[A:1-175] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 2.5Å
e2wo1B1[B:29-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR ; ligands: POL ; X-RAY DIFFRACTION 1.85Å
e2wo2A1[A:28-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR ; X-RAY DIFFRACTION 2.45Å
e2wo3A1[A:28-203] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR ; X-RAY DIFFRACTION 2.35Å
e3nruB1[B:32-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: CL,SO4 ; X-RAY DIFFRACTION 2.3Å
e3nruC1[C:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: CL,SO4 ; X-RAY DIFFRACTION 2.3Å
e3nruD1[D:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3nruE1[E:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3nruF1[F:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; X-RAY DIFFRACTION 2.3Å
e3nruG1[G:30-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3nruH1[H:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; X-RAY DIFFRACTION 2.3Å
e3nruI1[I:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; X-RAY DIFFRACTION 2.3Å
e3nruJ1[J:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3nruK1[K:31-204] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3nruL1[L:32-202] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN RECEPTOR ; ligands: SO4 ; X-RAY DIFFRACTION 2.3Å
e3p1iB1[B:39-210] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN TYPE-B RECEPTOR 3 ; ligands: CL,SO4 ; X-RAY DIFFRACTION 2.1Å
e3p1iC1[C:39-210] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN TYPE-B RECEPTOR 3 ; X-RAY DIFFRACTION 2.1Å
e4et7A1[A:59-232] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN TYPE-A RECEPTOR 5 ; X-RAY DIFFRACTION 2.6Å
e4bk4B1[B:27-203] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 3.65Å
e2lw8A1[A:1-183] Image Pymol Jmol Links: PDB, SCOP, CATH
EPHRIN TYPE-A RECEPTOR 4 ; SOLUTION NMR
e2x10A4[A:26-199] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 2 ; ligands: CL ; X-RAY DIFFRACTION 3.00Å
e3skjF2[F:28-96,F:121-142,F:163-170] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.5Å
e3fl7A3[A:25-199] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN RECEPTOR ; ligands: CL,NA ; X-RAY DIFFRACTION 2.5Å
e2x11A19[A:27-199] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 2 ; X-RAY DIFFRACTION 4.80Å
e4l0pA1[A:27-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 3 ; ligands: SO4 ; X-RAY DIFFRACTION 2.26Å
e4w4zA1[A:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL,HEZ ; X-RAY DIFFRACTION 2.410Å
e4w4zB1[B:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL,HEZ ; X-RAY DIFFRACTION 2.410Å
e4w4zC1[C:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL,HEZ ; X-RAY DIFFRACTION 2.410Å
e4w4zD1[D:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL,HEZ ; X-RAY DIFFRACTION 2.410Å
e4w50A1[A:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: BU2,GOL ; X-RAY DIFFRACTION 2.420Å
e4w50B1[B:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: BU2,GOL ; X-RAY DIFFRACTION 2.420Å
e4w50C1[C:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: BU2,GOL ; X-RAY DIFFRACTION 2.420Å
e4w50D1[D:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: BU2,GOL ; X-RAY DIFFRACTION 2.420Å
e4bk5A1[A:27-203] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 4.00Å
e4bkaA1[A:27-203] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 4.95Å
e4bkfB1[B:28-209] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 4.65Å
e4m4pA1[A:27-209] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 2.08Å
e5jr2A1[A:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL,HEZ ; X-RAY DIFFRACTION 1.75Å
e5jr2B1[B:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL,HEZ ; X-RAY DIFFRACTION 1.75Å
e5jr2C1[C:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL,HEZ ; X-RAY DIFFRACTION 1.75Å
e5jr2D1[D:28-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 4 ; ligands: GOL ; X-RAY DIFFRACTION 1.75Å
e3mbwA1[A:25-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 2 ; ligands: UNX ; X-RAY DIFFRACTION 2.81Å
e3mx0A3[A:27-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.500Å
e3mx0C3[C:27-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.500Å
e4m4rC4[C:27-260] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 3.13Å
e4m4rE4[E:27-260] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 3.13Å
e4m4rG4[G:27-260] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
EPHRIN TYPE-A RECEPTOR 4 ; X-RAY DIFFRACTION 3.13Å
e6b9lA1[A:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.200Å
e6b9lB1[B:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.200Å
e6b9lC1[C:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.200Å
e6b9lD1[D:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.200Å
e6nk0A1[A:27-207] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: ACA,EDO,GOL ; X-RAY DIFFRACTION 1.530Å
e6njzA1[A:27-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: BTN,GOL ; X-RAY DIFFRACTION 1.90Å
e6njzB1[B:26-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: BTN,GOL ; X-RAY DIFFRACTION 1.90Å
e6nk0B1[B:27-207] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: EDO,GOL,NH2,PEG ; X-RAY DIFFRACTION 1.530Å
e6nk1A1[A:27-207] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 1.550Å
e6nk1B1[B:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: ACT,GOL ; X-RAY DIFFRACTION 1.550Å
e6nk2A1[A:25-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: PEG ; X-RAY DIFFRACTION 2.20Å
e6nk2B1[B:23-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 2.20Å
e6nkpA1[A:26-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: BTN ; X-RAY DIFFRACTION 2.03Å
e6nkpB1[B:26-204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: BTN ; X-RAY DIFFRACTION 2.03Å
e6rw2A1[A:27-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: 29N,GOL ; X-RAY DIFFRACTION 2.26Å
e7czeI1[I:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.00Å
e7czeJ1[J:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.00Å
e7czeK1[K:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.00Å
e7czeL1[L:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.00Å
e7czfA1[A:28-210] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.20Å
e7czfD1[D:28-198] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; X-RAY DIFFRACTION 3.20Å
e7b7nE1[E:27-200] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-A receptor 2 ; ligands: CL,NA ; X-RAY DIFFRACTION 2.69Å
e7k7jA3[A:1-131,A:154-201] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-B receptor 6 ; X-RAY DIFFRACTION 3Å
e7s7kA1[A:19-196] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Ephrin type-B receptor 2 ; X-RAY DIFFRACTION 3.145Å

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes