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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

X: HTH
H: HTH
T: tri-helical
F: CPSF_A

PF03178 CL0186

Representatives:

e3ei1A4[A:1045-1140] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.800Å

e8ojhA4[A:1022-1148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: EDO ; X-RAY DIFFRACTION 2.720Å

e8bu1D1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 2.98Å

e8bu1G1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: GOL ; X-RAY DIFFRACTION 2.98Å

e8bu2A3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.127Å

e8bu2D2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: SO4 ; X-RAY DIFFRACTION 3.127Å

e8bu2G2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.127Å

e8bu3A3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.42Å

e8bu3D2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.42Å

e8bu3G3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.42Å

e8bu4A2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.079Å

e8bu4D2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.079Å

e8bu4G2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.079Å

e8bu5A2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.134Å

e8bu5D2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.134Å

e8bu5G1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.134Å

e8bu6G2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.45Å

e8bu6D1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.45Å

e8bu6A3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.45Å

e8bu7A2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.245Å

e8bu7D3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.245Å

e8bu7G2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.245Å

e8bu9A3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.505Å

e8bu9D2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.505Å

e8bu9G3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.505Å

e8buaA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.193Å

e8buaD2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.193Å

e8buaG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: CIT ; X-RAY DIFFRACTION 3.193Å

e8bubA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.417Å

e8bubD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.417Å

e8bubG2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.417Å

e8bucA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.85Å

e8bucD2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.85Å

e8bucG2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.85Å

e8budA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.198Å

e8budD1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.198Å

e8budG1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.198Å

e8bueA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.246Å

e8bueD2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.246Å

e8bueG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.246Å

e8bufA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.298Å

e8bufD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.298Å

e8bufG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.298Å

e8bugA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.527Å

e8bugD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.527Å

e8bugG2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.527Å

e8buhA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.789Å

e8buhD2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.789Å

e8buhG2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.789Å

e8buiA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.50Å

e8buiD1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.50Å

e8buiG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.50Å

e8bujA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.618Å

e8bujD1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.618Å

e8bujG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.618Å

e8bukA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.406Å

e8bukD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.406Å

e8bukG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.406Å

e8bulA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.40Å

e8bulD1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.40Å

e8bulG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.40Å

e8bumD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.359Å

e8bumG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.359Å

e8bunA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.08Å

e8bunD2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.08Å

e8bunG1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.08Å

e8buoA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.58Å

e8buoD2[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.58Å

e8buoG1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.58Å

e8bupA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.408Å

e8bupD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.408Å

e8bupG2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; X-RAY DIFFRACTION 3.408Å

e8buqA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.199Å

e8buqD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.199Å

e8buqG2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.199Å

e8burD1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å

e8burA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å

e8burG1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å

e8busD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.253Å

e8busA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.253Å

e8busG2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.253Å

e8butA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.246Å

e8butD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.246Å

e8butG1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.246Å

e8b3fd2[d:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e3ei2A4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.600Å

e4a0kC4[C:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 5.93Å

e4a0lA4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å

e4a0lC4[C:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å

e4e54A4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å

e4e5zA4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å

e4a0aA4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.60Å

e3ei4A1[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å

e3ei4C1[C:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å

e2b5lA1[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å

e2b5lB1[B:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å

e3i7kA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e2b5mA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.92Å

e3i8eA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å

e3i8eB5[B:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å

e3i7nA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e3i7oA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e3i89A5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å

e3i7pA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å

e3i8cA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e3i7lA5[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e4a08A1[A:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.00Å

e4a09A1[A:1020-1105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.10Å

e4a0bA1[A:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å

e4a0bC1[C:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å

e4a11A1[A:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.30Å

e3ei3A1[A:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.300Å

e4ci1A3[A:1022-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.98Å

e4ci2A3[A:1022-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.95Å

e4ci3A3[A:1022-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.50Å

e3e0cA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.400Å

e3ei4E5[E:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å

e3i7hA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.9Å

e2hyeA4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.100Å

e5fqdA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.45Å

e5fqdD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.45Å

e4tz4A4[A:1022-1147] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.010Å

e5hxbY3[Y:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å

e5hxbB2[B:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å

e5gm6F3[F:1232-1261,F:1298-1361] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e5jk7A4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å

e5jk7B3[B:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å

e5lqwX3[X:1232-1252,X:1298-1331] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e5v3oA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å

e5nrlP1[P:1232-1261,P:1298-1361] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6bn7A1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å

e6bllA1[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH

e6blyA3[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6bm0A3[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6fbsA3[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH

e6fuwA1[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6bn9A1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.38Å

e6bnbA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 6.34Å

e6boyA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.33Å

e6bn8A1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.99Å

e5zwm32[3:1232-1261,3:1298-1361] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6g90P3[P:1232-1261,P:1298-1361] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6dnhA3[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e5zyaA2[A:1133-1222] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6ff4v1[v:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e5z5631[3:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e5zwo34[3:1232-1261,3:1298-1361] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6en4A2[A:1115-1204] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; X-RAY DIFFRACTION 3.08Å

e5z5733[3:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e5z5834[3:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6h0fJ1[J:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6ah031[3:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6h0fA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6h0fD1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6h0fG1[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6h0gA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DDB1 (DNA damage binding protein 1),DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.170Å

e6h0gD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DDB1 (DNA damage binding protein 1),DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.170Å

e6ahd31[3:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6dszA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å

e6dszB4[B:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å

e6fcvA1[A:1020-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6ff7v2[v:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6qx9B32[B3:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6r8yK3[K:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r8zK1[K:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r90K2[K:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r91K2[K:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r92K3[K:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6paiA4[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.900Å

e6urgA3[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6uroA2[A:1351-1443] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6q0rA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6q0vA1[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6q0wA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6ud7B1[B:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.300Å

e6ue5B3[B:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.61Å

e6sj7B1[B:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6umlA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.58Å

e6y50v3[v:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6y5qv2[v:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6td3A3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å

e6td3D1[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å

e6td3G2[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å

e6xk9Y4[Y:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å

e6xk9B2[B:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å

e7abgE1[E:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7abhE1[E:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7abiE1[E:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7dco34[3:1232-1261,3:1298-1361] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RSE1 isoform 1 ; ELECTRON MICROSCOPY

e7dvq33[3:1133-1217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7lpsA2[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e7lpsD3[D:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e7lpsG3[G:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e7lpsJ2[J:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e6zx9A3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: GOL ; X-RAY DIFFRACTION 2.51Å

e6zueA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.09Å

e7okqA3[A:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7okqE3[E:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7okqI3[I:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7okqM3[M:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7oobd3[d:1045-1140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

Next

e5ifeA4[A:1133-1222] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; X-RAY DIFFRACTION 3.1Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

T: DNA-binding domain of intron-encoded endonucleases

lacks the N-terminal helix, circularly permuted wing

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes