Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich




Representatives:
e1fnlA1[A:3-86]
nonrep
Image
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LOW AFFINITY IMMUNOGLOBULIN GAMMA FC REGION RECEPTOR III-B ; ligands: HG ; X-RAY DIFFRACTION 1.8Å
e1fnlA2[A:87-175]
nonrep
Image
Pymol
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LOW AFFINITY IMMUNOGLOBULIN GAMMA FC REGION RECEPTOR III-B ; ligands: HG ; X-RAY DIFFRACTION 1.8Å
e1ugnA1[A:2-97]
nonrep
Image
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Leukocyte immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 1.8Å
e1xauA1[A:11-114]
nonrep
Image
Pymol
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B- AND T-LYMPHOCYTE ATTENUATOR ; ligands: CD ; X-RAY DIFFRACTION 1.8Å
e1uctA1[A:2-100]
nonrep
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IMMUNOGLOBULIN ALPHA FC RECEPTOR ; X-RAY DIFFRACTION 2.1Å
e2oz4A1[A:283-366]
nonrep
Image
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INTERCELLULAR ADHESION MOLECULE 1 ; ligands: NAG ; X-RAY DIFFRACTION 2.7Å
e1iraY2[Y:102-204]
nonrep
Image
Pymol
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DOI
INTERLEUKIN-1 RECEPTOR ; ligands: NAG ; X-RAY DIFFRACTION 2.70Å
e6ewcH1[H:4-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 1 ; X-RAY DIFFRACTION 3.200Å
e6ewoD1[D:4-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
LIR-1 ; X-RAY DIFFRACTION 2.300Å
e6ewoH2[H:6-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
LIR-1 ; X-RAY DIFFRACTION 2.300Å
e6grqA4[A:220-314] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 3.30Å
e6grqA1[A:25-120] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 3.30Å
e6grsA4[A:223-317] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 3.4Å
e6grsB4[B:220-315] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 3.4Å
e6grsA1[A:29-222] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 3.4Å
e6grsB1[B:26-120] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 3.4Å
e6grtA1[A:25-120] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 4.50Å
e6grtA4[A:220-315] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; X-RAY DIFFRACTION 4.50Å
e6grtB1[B:25-222] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Paired immunoglobulin-like receptor B ; ligands: NAG ; X-RAY DIFFRACTION 4.50Å
e6k7oA1[A:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 4 ; X-RAY DIFFRACTION 3.00Å
e6k7oP1[P:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 4 ; X-RAY DIFFRACTION 3.00Å
e6k7oR1[R:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 4 ; X-RAY DIFFRACTION 3.00Å
e6k7oQ1[Q:2-95] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 4 ; X-RAY DIFFRACTION 3.00Å
e6aedA3[A:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 2 ; X-RAY DIFFRACTION 3.797Å
e6aeeG3[G:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 1 ; X-RAY DIFFRACTION 3.30Å
e6aeeH3[H:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 1 ; X-RAY DIFFRACTION 3.30Å
e6k60H1[H:9-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 1 ; X-RAY DIFFRACTION 3.149Å
e6k60D1[D:5-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 1 ; X-RAY DIFFRACTION 3.149Å
e6zdxB3[B:2-97] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte immunoglobulin-like receptor subfamily B member 1 ; X-RAY DIFFRACTION 3.00Å
e7nmuBBB2[BBB:6-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Platelet glycoprotein VI ; X-RAY DIFFRACTION 2.498Å
e7nmuAAA1[AAA:9-92] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Platelet glycoprotein VI ; X-RAY DIFFRACTION 2.498Å
e7jz1H3[H:108-229] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
MGC34 heavy chain ; X-RAY DIFFRACTION 3.350Å
e7jz4A1[A:104-233] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
MGD21 heavy chain ; ligands: NAG,PO4 ; X-RAY DIFFRACTION 2.747Å
e7jziA1[A:108-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
LAIR1 ectodomain from antibody MGD21 ; X-RAY DIFFRACTION 2.700Å
e7jziC1[C:108-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
LAIR1 ectodomain from antibody MGD21 ; X-RAY DIFFRACTION 2.700Å
e7jzkC1[C:108-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
LAIR1 ecotodomain from MGD21 antibody ; X-RAY DIFFRACTION 2.450Å
e7jzkA1[A:108-212] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
LAIR1 ecotodomain from MGD21 antibody ; X-RAY DIFFRACTION 2.450Å
e7jz4C2[C:104-233] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
MGD21 heavy chain ; ligands: NAG,PO4 ; X-RAY DIFFRACTION 2.747Å
e7f9lG1[G:25-123] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.70Å
e7f9lH1[H:25-123] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.70Å
e7f9lI1[I:25-123] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.70Å
e7f9lJ1[J:25-123] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.70Å
e7f9lK1[K:25-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.70Å
e7f9lL1[L:26-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.70Å
e7f9mC1[C:25-123] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.90Å
e7f9mD1[D:25-123] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 2.90Å
e7f9nC1[C:25-122] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 3.00Å
e7f9nD1[D:25-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Leukocyte-associated immunoglobulin-like receptor 1 ; X-RAY DIFFRACTION 3.00Å
e7r58A1[A:89-183] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Platelet glycoprotein VI ; ligands: GOL ; X-RAY DIFFRACTION 1.90Å
e7r58A2[A:3-88] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Platelet glycoprotein VI ; ligands: CL,GOL,SCN ; X-RAY DIFFRACTION 1.90Å
e8skuR2[R:6-99] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8grxB2[B:25-220] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e3wjjC4[C:5-83] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Low affinity immunoglobulin gamma Fc region receptor II-b ; X-RAY DIFFRACTION 2.60Å
e4x4mE3[E:21-102] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
High affinity immunoglobulin gamma Fc receptor I ; X-RAY DIFFRACTION 3.485Å
e2e5eA1[A:21-121] Image Pymol Jmol Links: PDB, SCOP, CATH
Advanced glycosylation end product-specific receptor ; SOLUTION NMR
e4lp4A3[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: NA ; X-RAY DIFFRACTION 2.400Å
e4lp4B3[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: NA ; X-RAY DIFFRACTION 2.400Å
e4lp5A8[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; X-RAY DIFFRACTION 3.800Å
e3s59B5[B:22-118] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e3s58B5[B:21-118] Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB
e4oi7B2[B:21-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR ; ligands: EDO ; X-RAY DIFFRACTION 3.1Å
e4oi8B2[B:21-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR ; X-RAY DIFFRACTION 3.1Å
e4of5B2[B:22-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; X-RAY DIFFRACTION
e4ofvB2[B:21-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; X-RAY DIFFRACTION 3.100Å
e2l7uA1[A:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; SOLUTION NMR
e2movA1[A:1-105] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR ; ligands: IOR ; SOLUTION NMR
e3cjjA2[A:22-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR ; ligands: ZN ; X-RAY DIFFRACTION 1.85Å
e2mjwA1[A:21-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; SOLUTION NMR
e2mjwC1[C:21-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; SOLUTION NMR
e4p2yA3[A:21-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT ; X-RAY DIFFRACTION 2.300Å
e2m1kA1[A:21-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; SOLUTION NMR
e2m1kC1[C:21-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; SOLUTION NMR
e4im8A1[A:22-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
ADVANCED GLYCATION END-PRODUCTS RECEPTOR ; X-RAY DIFFRACTION 3.5Å
e3o3uN3[N:371-1119] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Maltose-binding periplasmic protein, Advanced glycosylation end product-specific receptor ; ligands: SO4 ; X-RAY DIFFRACTION 1.49Å
e3s58A2[A:23-118] Image Pymol Jmol Links: PDB, SCOP, CATH
e4of5A1[A:23-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; X-RAY DIFFRACTION
e4ofvA1[A:23-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; X-RAY DIFFRACTION 3.100Å
e4oi7A1[A:23-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR ; ligands: EDO ; X-RAY DIFFRACTION 3.1Å
e4oi8A1[A:23-121] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
ADVANCED GLYCOSYLATION END PRODUCT-SPECIFIC RECEPTOR ; X-RAY DIFFRACTION 3.1Å
e4ybhA1[A:21-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT ; X-RAY DIFFRACTION 2.400Å
e6xq1A1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V74 ; X-RAY DIFFRACTION 1.51Å
e7lmwA1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,Y6P ; X-RAY DIFFRACTION 2.50Å
e7lmwB1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,Y6P ; X-RAY DIFFRACTION 2.50Å
e6xq1B1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V74 ; X-RAY DIFFRACTION 1.51Å
e6xq3A1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6Y ; X-RAY DIFFRACTION 1.70Å
e6xq3B1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6Y ; X-RAY DIFFRACTION 1.70Å
e6xq5A1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6M ; X-RAY DIFFRACTION 1.80Å
e6xq5B1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6M ; X-RAY DIFFRACTION 1.80Å
e6xq6A1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6P ; X-RAY DIFFRACTION 1.90Å
e6xq6B1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6P ; X-RAY DIFFRACTION 1.90Å
e6xq7A1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,V6V ; X-RAY DIFFRACTION 1.80Å
e6xq7B1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6V ; X-RAY DIFFRACTION 1.80Å
e6xq8A1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,V6M,V6P ; X-RAY DIFFRACTION 1.82Å
e6xq8B1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,V6M,V6P ; X-RAY DIFFRACTION 1.82Å
e6xq9A1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,V6M,V6S ; X-RAY DIFFRACTION 2.30Å
e6xq9B1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,V6M,V6S ; X-RAY DIFFRACTION 2.30Å
e7lmlA1[A:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,Y6S ; X-RAY DIFFRACTION 2.14983Å
e7lmlB1[B:20-118] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Advanced glycosylation end product-specific receptor ; ligands: ACT,CL,Y6S ; X-RAY DIFFRACTION 2.14983Å
e6yaxAAA2[AAA:131-219] Image Pymol Jmol Links: PDB, SCOP, CATH
Low affinity immunoglobulin gamma Fc region receptor II-c ; ligands: NAG,PG4 ; X-RAY DIFFRACTION 2.80Å
e7tzgC1[C:172-261] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Lymphocyte activation gene 3 protein ; ligands: NAG ; X-RAY DIFFRACTION 3.710Å
Previous
Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes