Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
Representatives:
e1vpsA1[A:32-316] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
POLYOMAVIRUS VP1 PENTAMER ; X-RAY DIFFRACTION 1.9Å
e6hkuI1[I:32-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL,SIA ; X-RAY DIFFRACTION 1.98Å
e6hkuJ1[J:32-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 1.98Å
e6hkvA1[A:32-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB ; X-RAY DIFFRACTION 1.75Å
e6hkvB1[B:32-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB ; X-RAY DIFFRACTION 1.75Å
e6hkvC1[C:32-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,GXB,MG ; X-RAY DIFFRACTION 1.75Å
e6hkvD1[D:32-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB,MG ; X-RAY DIFFRACTION 1.75Å
e6hkvE1[E:33-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL,GXB ; X-RAY DIFFRACTION 1.75Å
e6hkvF1[F:32-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB,MG ; X-RAY DIFFRACTION 1.75Å
e6hkvG1[G:33-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB,MG ; X-RAY DIFFRACTION 1.75Å
e6hkvH1[H:33-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB ; X-RAY DIFFRACTION 1.75Å
e6hkvI1[I:32-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB ; X-RAY DIFFRACTION 1.75Å
e6hkvJ1[J:32-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GXB ; X-RAY DIFFRACTION 1.75Å
e6y5zBBB1[BBB:29-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 1.549Å
e6y5zEEE1[EEE:29-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 1.549Å
e6y5zAAA1[AAA:29-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 1.549Å
e6y5zCCC1[CCC:30-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 1.549Å
e6y60AAA1[AAA:40-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60BBB1[BBB:40-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60CCC1[CCC:41-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60DDD1[DDD:41-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60EEE1[EEE:40-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60FFF1[FFF:41-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60GGG1[GGG:41-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60HHH1[HHH:41-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60III1[III:41-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y60JJJ1[JJJ:40-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: PO4,SIA ; X-RAY DIFFRACTION 1.798Å
e6y5zDDD1[DDD:28-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 1.549Å
e6y67AAA1[AAA:23-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67PPP1[PPP:23-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y6aP1[P:23-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aR1[R:23-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y67BBB1[BBB:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67CCC1[CCC:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67DDD1[DDD:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.618Å
e6y67EEE1[EEE:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67FFF1[FFF:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67HHH1[HHH:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67III1[III:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67JJJ1[JJJ:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67OOO1[OOO:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67QQQ1[QQQ:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67RRR1[RRR:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67TTT1[TTT:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.618Å
e6y67YYY1[YYY:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67ZZZ1[ZZZ:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.618Å
e6y6aE1[E:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aM1[M:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aO1[O:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aT1[T:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6ag1[g:22-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.65Å
e6y5xB1[B:49-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xC1[C:49-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xD1[D:38-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xG1[G:37-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y65FFF1[FFF:19-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65GGG1[GGG:20-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65HHH1[HHH:19-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65III1[III:20-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y66CCC1[CCC:20-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66GGG1[GGG:19-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66III1[III:20-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66JJJ1[JJJ:19-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y5xF1[F:38-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xE1[E:48-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xH1[H:48-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xI1[I:48-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xJ1[J:48-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y5xA1[A:48-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 2.30Å
e6y61BBB1[BBB:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61DDD1[DDD:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61EEE1[EEE:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61FFF1[FFF:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61GGG1[GGG:24-292] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61HHH1[HHH:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61III1[III:22-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y63AAA1[AAA:34-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y63BBB1[BBB:34-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y63CCC1[CCC:34-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD ; X-RAY DIFFRACTION 1.651Å
e6y63DDD1[DDD:33-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y63EEE1[EEE:34-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y63FFF1[FFF:34-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y63GGG1[GGG:34-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y63III1[III:33-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y64A1[A:34-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y64B1[B:34-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y64C1[C:34-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y64D1[D:34-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y64E1[E:34-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG ; X-RAY DIFFRACTION 1.6Å
e6y64G1[G:33-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y64H1[H:34-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG ; X-RAY DIFFRACTION 1.6Å
e6y64I1[I:34-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y64J1[J:34-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y65AAA1[AAA:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65BBB1[BBB:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65CCC1[CCC:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65DDD1[DDD:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65EEE1[EEE:23-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y65JJJ1[JJJ:23-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,EDO,IMD ; X-RAY DIFFRACTION 1.45Å
e6y66AAA1[AAA:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66BBB1[BBB:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66DDD1[DDD:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66EEE1[EEE:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66FFF1[FFF:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y66HHH1[HHH:22-286] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,IMD,MNA ; X-RAY DIFFRACTION 1.95Å
e6y67GGG1[GGG:24-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67LLL1[LLL:24-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67MMM1[MMM:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67NNN1[NNN:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.618Å
e6y67SSS1[SSS:24-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67UUU1[UUU:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.618Å
e6y67VVV1[VVV:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.618Å
e6y67WWW1[WWW:24-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.618Å
e6y67XXX1[XXX:24-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67ccc1[ccc:26-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67ddd1[ddd:24-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y6aA1[A:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aB1[B:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL,SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aC1[C:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aD1[D:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aG1[G:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aH1[H:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aI1[I:24-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aJ1[J:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aK1[K:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aN1[N:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aS1[S:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aU1[U:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aX1[X:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aY1[Y:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aZ1[Z:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aa1[a:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6ae1[e:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6ah1[h:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.65Å
e6y6ai1[i:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aj1[j:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6ak1[k:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.65Å
e6y6al1[l:25-289] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; X-RAY DIFFRACTION 2.65Å
e6y6am1[m:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6an1[n:24-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y9iAAA1[AAA:37-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major Capsid Protein VP1 ; ligands: MG ; X-RAY DIFFRACTION 1.90Å
e6y9iBBB1[BBB:37-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major Capsid Protein VP1 ; ligands: MG ; X-RAY DIFFRACTION 1.90Å
e6y9iCCC1[CCC:37-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major Capsid Protein VP1 ; ligands: MG ; X-RAY DIFFRACTION 1.90Å
e6y9iDDD1[DDD:37-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major Capsid Protein VP1 ; ligands: MG ; X-RAY DIFFRACTION 1.90Å
e6y9iEEE1[EEE:38-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major Capsid Protein VP1 ; ligands: MG ; X-RAY DIFFRACTION 1.90Å
e6y61AAA1[AAA:23-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61CCC1[CCC:23-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y61JJJ1[JJJ:23-291] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: GOL ; X-RAY DIFFRACTION 2.45Å
e6y63HHH1[HHH:33-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD,SIA ; X-RAY DIFFRACTION 1.651Å
e6y63JJJ1[JJJ:33-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: MG,MPD ; X-RAY DIFFRACTION 1.651Å
e6y64F1[F:33-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: EDO,GOL,MG,SIA ; X-RAY DIFFRACTION 1.6Å
e6y67KKK1[KKK:23-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67aaa1[aaa:25-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y67bbb1[bbb:25-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: CL ; X-RAY DIFFRACTION 2.618Å
e6y6aF1[F:23-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aL1[L:23-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aQ1[Q:23-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aV1[V:23-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6aW1[W:23-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6ab1[b:25-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6ac1[c:25-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6ad1[d:25-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y6af1[f:23-290] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ligands: SIA ; X-RAY DIFFRACTION 2.65Å
e6y5yB1[B:37-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yA1[A:39-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yD1[D:38-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yF1[F:49-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yG1[G:37-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yJ1[J:49-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yC1[C:38-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yE1[E:38-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yH1[H:48-321] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e6y5yI1[I:48-322] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
VP1 ; ligands: GOL,MG ; X-RAY DIFFRACTION 1.80Å
e7k23D1[D:1-340] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ELECTRON MICROSCOPY
e7k25D1[D:1-340] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Capsid protein VP1 ; ELECTRON MICROSCOPY
e7b69GGG1[GGG:27-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b69III1[III:27-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b69JJJ1[JJJ:27-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b6aCCC1[CCC:33-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: CA,DMS,IOD ; X-RAY DIFFRACTION 1.44Å
e7b6cFFF1[FFF:19-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: CA ; X-RAY DIFFRACTION 2.48Å
e7b6cGGG1[GGG:18-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: CA ; X-RAY DIFFRACTION 2.48Å
e7b69AAA1[AAA:27-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b69CCC1[CCC:27-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b69DDD1[DDD:27-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b69HHH1[HHH:27-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b6aDDD1[DDD:32-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: CA,DMS,IOD,NA ; X-RAY DIFFRACTION 1.44Å
e7b6cBBB1[BBB:19-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; X-RAY DIFFRACTION 2.48Å
e7b6cEEE1[EEE:18-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: CA ; X-RAY DIFFRACTION 2.48Å
e7b6cHHH1[HHH:18-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 2.48Å
e7b6cIII1[III:19-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: CA ; X-RAY DIFFRACTION 2.48Å
e7b6cJJJ1[JJJ:18-296] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: CA ; X-RAY DIFFRACTION 2.48Å
e7b6cCCC1[CCC:18-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 2.48Å
e7b6cDDD1[DDD:18-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; ligands: CA ; X-RAY DIFFRACTION 2.48Å
e7b69BBB1[BBB:26-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b69EEE1[EEE:31-295] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b69FFF1[FFF:28-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: DMS ; X-RAY DIFFRACTION 1.47Å
e7b6aAAA1[AAA:32-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: CA,DMS,IOD,NA ; X-RAY DIFFRACTION 1.44Å
e7b6aBBB1[BBB:30-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: CA,DMS,IOD ; X-RAY DIFFRACTION 1.44Å
e7b6aEEE1[EEE:32-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1 ; ligands: CA,DMS,IOD ; X-RAY DIFFRACTION 1.44Å
e7b6cAAA1[AAA:19-297] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Major capsid protein VP1,Major capsid protein VP1 ; X-RAY DIFFRACTION 2.48Å
e7b6sFFF1[FFF:21-291] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
Capsid protein VP1 ; ligands: MG,MPD,PEG,PGE ; X-RAY DIFFRACTION 1.85Å
Previous NextPseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
some similarity with Ig fold
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes