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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

X: jelly-roll
H: Double-stranded beta-helix
T: Double-stranded beta-helix
F: Cupin_8

PF13621 CL0029

Representatives:

e1h2kA1[A:15-349] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FACTOR INHIBITING HIF1 ; ligands: FE2,OGA,SO4 ; X-RAY DIFFRACTION 2.150Å

e1iz3A1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FIH ; ligands: SO4 ; X-RAY DIFFRACTION 2.8Å

e1yciA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR ; ligands: FE2,NDF,SO4 ; X-RAY DIFFRACTION 2.7Å

e2cgoA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR ; ligands: FE,FUM,SO4 ; X-RAY DIFFRACTION 2.300Å

e1h2nA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: AKG,FE2,SO4 ; X-RAY DIFFRACTION 2.840Å

e1mzeA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

factor inhibiting HIF1 ; ligands: FE2,TAR ; X-RAY DIFFRACTION 2.20Å

e1h2lA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FACTOR INHIBITING HIF1 ; ligands: AKG,FE2,SO4 ; X-RAY DIFFRACTION 2.250Å

e1h2mA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FACTOR INHIBITING HIF1 ; ligands: OGA,SO4,ZN ; X-RAY DIFFRACTION 2.500Å

e1mzfA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

factor inhibiting HIF1 ; ligands: AKG,FE2 ; X-RAY DIFFRACTION 2.40Å

e2cgnA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR ; ligands: FE,SIN,SO4 ; X-RAY DIFFRACTION 2.400Å

e2y0iA1[A:11-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: AKG,FE2,GOL,SO4 ; X-RAY DIFFRACTION 2.28Å

e3uyjA1[A:173-416] Image Pymol Jmol Links: PDB, SCOP, CATH

LYSINE-SPECIFIC DEMETHYLASE 8 ; ligands: AKG,NI ; X-RAY DIFFRACTION 2.35Å

e4ai8A1[A:1-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: DZA,GOL,SO4,ZN ; X-RAY DIFFRACTION 2.40Å

e4aapA1[A:0-454] Image Pymol Jmol Links: PDB, SCOP, CATH

LYSINE-SPECIFIC DEMETHYLASE 8 ; ligands: OGA,ZN ; X-RAY DIFFRACTION 2.60Å

e4gjyA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JMJC DOMAIN-CONTAINING PROTEIN 5 ; ligands: CO,OGA ; X-RAY DIFFRACTION 1.25Å

e4b7eA1[A:1-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: GOL,OGA,SO4,ZN ; X-RAY DIFFRACTION 2.50Å

e4bioA1[A:11-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: 8XQ,FE,GOL,SO4 ; X-RAY DIFFRACTION 2.45Å

e2ilmA1[A:8-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1 alpha inhibitor ; ligands: AKG,BCT,FE2,GOL,SO4 ; X-RAY DIFFRACTION 2.300Å

e3d8cA1[A:9-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1 alpha inhibitor ; ligands: AKG,GOL,SO4,ZN ; X-RAY DIFFRACTION 2.100Å

e2wa3A1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: A29,FE2 ; X-RAY DIFFRACTION 2.50Å

e2wa4A1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: 069,FE2,SO4 ; X-RAY DIFFRACTION 2.49Å

e3kcxA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: CQL,FE2,GOL,SO4 ; X-RAY DIFFRACTION 2.600Å

e3kcyA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: FE2,HQY,SO4 ; X-RAY DIFFRACTION 2.300Å

e2w0xA1[A:8-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR ; ligands: FE2,GOL,PD2,SO4 ; X-RAY DIFFRACTION 2.13Å

e3uyjB1[B:181-416] Image Pymol Jmol Links: PDB, SCOP, CATH

LYSINE-SPECIFIC DEMETHYLASE 8 ; ligands: AKG,NI ; X-RAY DIFFRACTION 2.35Å

e3p3nA1[A:9-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: AKG,FE2,GOL,SO4 ; X-RAY DIFFRACTION 2.4Å

e3p3pA1[A:9-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed,

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: AKG,FE2,GOL,SO4 ; X-RAY DIFFRACTION 2.6Å

e2xumA1[A:1-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: OGA,SO4,ZN ; X-RAY DIFFRACTION 2.20Å

e2yc0A1[A:1-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: 2HG,FE2,GOL,SO4 ; X-RAY DIFFRACTION 2.15Å

e2ydeA1[A:1-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: FE,GOL,S2G,SO4 ; X-RAY DIFFRACTION 2.28Å

e3od4A1[A:8-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: 8XQ,GOL,SO4,ZN ; X-RAY DIFFRACTION 2.200Å

e4b7kA1[A:1-325] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: OGA,SO4,ZN ; X-RAY DIFFRACTION 2.39Å

e4gazA1[A:176-416] Image Pymol Jmol Links: PDB, SCOP, CATH

LYSINE-SPECIFIC DEMETHYLASE 8 ; ligands: NI,OGA ; X-RAY DIFFRACTION 2.81Å

e4gazB1[B:176-416] Image Pymol Jmol Links: PDB, SCOP, CATH

LYSINE-SPECIFIC DEMETHYLASE 8 ; ligands: NI,OGA ; X-RAY DIFFRACTION 2.81Å

e4jaaA1[A:22-349] Image Pymol Jmol Links: PDB, SCOP, CATH

HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR ; ligands: OGA,SO4,ZN ; X-RAY DIFFRACTION 2.39Å

e4gjzA2[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JMJC DOMAIN-CONTAINING PROTEIN 5 ; ligands: AKG,BME,CO ; X-RAY DIFFRACTION 1.05Å

e4aapB2[B:0-454] Image Pymol Jmol Links: PDB, SCOP, CATH

LYSINE-SPECIFIC DEMETHYLASE 8 ; ligands: OGA,ZN ; X-RAY DIFFRACTION 2.60Å

e4nr1A1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: OGA,SO4,ZN ; X-RAY DIFFRACTION 2.680Å

e4qszA3[A:-4-316] Image Pymol Jmol Links: PDB, SCOP, CATH

Maltose-binding periplasmic protein, JmjC domain-containing protein 7 chimera ; X-RAY DIFFRACTION 2.59Å

e4qszB3[B:0-316] Image Pymol Jmol Links: PDB, SCOP, CATH

Maltose-binding periplasmic protein, JmjC domain-containing protein 7 chimera ; X-RAY DIFFRACTION 2.59Å

e4qu2A1[A:-1-219,A:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: AKG,NI ; X-RAY DIFFRACTION 2.55Å

e4qu2B1[B:-1-219,B:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: AKG,NI ; X-RAY DIFFRACTION 2.55Å

e4qu1A1[A:181-416] Image Pymol Jmol Links: PDB, SCOP, CATH

Lysine-specific demethylase 8 ; ligands: AKG,GOL,NI ; X-RAY DIFFRACTION 1.57Å

e4z1vA1[A:9-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: FE,NO,OGA,PEG,SO4 ; X-RAY DIFFRACTION 2.100Å

e4z2wA1[A:9-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: AKG,FE,PEG,SO4 ; X-RAY DIFFRACTION 2.420Å

e5jwpA1[A:8-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: AKG,GOL,SO4,ZN ; X-RAY DIFFRACTION 2.100Å

e5fbjA1[A:181-416] Image Pymol Jmol Links: PDB, SCOP, CATH

Lysine-specific demethylase 8 ; ligands: AKG,NMM,ZN ; X-RAY DIFFRACTION 2.4Å

e5jwkA1[A:9-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: AKG,FE2,PEG,SO4 ; X-RAY DIFFRACTION 2.300Å

e5jwlA1[A:9-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: AKG,PEG,SO4,ZN ; X-RAY DIFFRACTION 2.400Å

e5op6A1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: A0W,GOL,SO4,ZN ; X-RAY DIFFRACTION 2.45Å

e5op8A1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: A1H,GOL,SO4,ZN ; X-RAY DIFFRACTION 2.3Å

e5opcA1[A:11-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: A1Z,GOL,SO4,ZN ; X-RAY DIFFRACTION 2.3Å

e6f4mA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; X-RAY DIFFRACTION 1.70Å

e6f4oA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: MN,SIN,TRS ; X-RAY DIFFRACTION 1.28Å

e6f4pA1[A:181-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: MN,OGA,TRS ; X-RAY DIFFRACTION 1.45Å

e6f4qA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: GOL,MN,OGA,TRS ; X-RAY DIFFRACTION 1.12Å

e6f4rA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: MN,OGA,TRS ; X-RAY DIFFRACTION 1.30Å

e6f4sA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: AKG,GOL,MN,TRS ; X-RAY DIFFRACTION 1.46Å

e6f4tA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: GOL,MN,OGA,TRS ; X-RAY DIFFRACTION 1.22Å

e6f4nB1[B:174-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: AKG,MN ; X-RAY DIFFRACTION 2.54Å

e6avsA1[A:181-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Lysine-specific demethylase 8 ; ligands: NMM,ZN ; X-RAY DIFFRACTION 2.000Å

e6ax3A1[A:181-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Lysine-specific demethylase 8 ; ligands: 2MR,AKG,ZN ; X-RAY DIFFRACTION 2.25Å

e5nfnB1[B:-1-219,B:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: AKG,GOL,MN,NO3 ; X-RAY DIFFRACTION 2.980Å

e5nfnA1[A:0-219,A:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: AKG,MN,NO3 ; X-RAY DIFFRACTION 2.980Å

e5nfnC1[C:0-219,C:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: MN,NO3 ; X-RAY DIFFRACTION 2.980Å

e5nfnD1[D:-1-219,D:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: AKG,GOL,MN,NO3 ; X-RAY DIFFRACTION 2.980Å

e5nfoA1[A:0-219,A:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: AKG,GOL,MN,NO3 ; X-RAY DIFFRACTION 2.170Å

e5nfoB1[B:-1-219,B:240-316] Image Pymol Jmol Links: PDB, SCOP, CATH

JmjC domain-containing protein 7 ; ligands: AKG,GOL,MN,NO3 ; X-RAY DIFFRACTION 2.170Å

e6f4nA1[A:174-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: AKG,MN ; X-RAY DIFFRACTION 2.54Å

e6h9jA1[A:12-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: GOL,OGA,SO4,ZN ; X-RAY DIFFRACTION 1.83Å

e6hkpA1[A:12-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: GOL,OGA,SO4,ZN ; X-RAY DIFFRACTION 1.90Å

e6ha6A1[A:10-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: GOL,OGA,SO4,ZN ; X-RAY DIFFRACTION 1.98Å

e6hc8A1[A:1-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: GOL,OGA,SO4,ZN ; X-RAY DIFFRACTION 1.90Å

e6hl5A1[A:12-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: GOL,OGA,SO4,ZN ; X-RAY DIFFRACTION 1.98Å

e6hl6A1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: GOL,OGA,SO4,ZN ; X-RAY DIFFRACTION 1.97Å

e6i9lA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: MN,PD2,TRS ; X-RAY DIFFRACTION 1.53Å

e6i9mA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: 2HG,GOL,MN,TRS ; X-RAY DIFFRACTION 1.650Å

e6i9nA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein 5 ; ligands: GOL,MN,S2G,TRS ; X-RAY DIFFRACTION 1.34Å

e6rujA1[A:1-349] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: OGA,SO4,ZN ; X-RAY DIFFRACTION 2.42Å

e7a1oA1[A:3-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: QVT,SO4,ZN ; X-RAY DIFFRACTION 2.21Å

e7a1jA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: QVN,SO4,ZN ; X-RAY DIFFRACTION 1.900Å

e7a1kA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: QVZ,SO4,ZN ; X-RAY DIFFRACTION 1.990Å

e7a1lA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: ROQ,SO4,ZN ; X-RAY DIFFRACTION 2.29Å

e7a1mA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: QVW,SO4,ZN ; X-RAY DIFFRACTION 2.178Å

e7a1nA1[A:20-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: ROQ,SO4,ZN ; X-RAY DIFFRACTION 2.010Å

e7a1pA1[A:12-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: QW2,SO4,ZN ; X-RAY DIFFRACTION 1.759Å

e7a1qA1[A:12-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: QVQ,SO4,ZN ; X-RAY DIFFRACTION 1.750Å

e7a1sA1[A:15-349] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Hypoxia-inducible factor 1-alpha inhibitor ; ligands: ROQ,SO4,ZN ; X-RAY DIFFRACTION 2.006Å

e7dywA1[A:181-416] Image Pymol Jmol Links: PDB, SCOP, CATH

Bifunctional peptidase and arginyl-hydroxylase JMJD5 ; ligands: HRL,MN ; X-RAY DIFFRACTION 2.13Å

e7dytA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH

Bifunctional peptidase and arginyl-hydroxylase JMJD5 ; ligands: HR3,MN ; X-RAY DIFFRACTION 1.62Å

e7dyuA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH

Bifunctional peptidase and arginyl-hydroxylase JMJD5 ; ligands: HR9,MN,TRS ; X-RAY DIFFRACTION 1.72Å

e7dyvA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH

Bifunctional peptidase and arginyl-hydroxylase JMJD5 ; ligands: HRF,MN ; X-RAY DIFFRACTION 1.92Å

e7dyxA1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH

Bifunctional peptidase and arginyl-hydroxylase JMJD5 ; ligands: HRR,MN ; X-RAY DIFFRACTION 2.27Å

e7yxgA1[A:1-313] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: AKG,EDO,MN ; X-RAY DIFFRACTION 1.640Å

e7yxgB1[B:-1-313] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: AKG,EDO,MG,MN ; X-RAY DIFFRACTION 1.640Å

e7yxhA1[A:1-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MG,MN,SIN ; X-RAY DIFFRACTION 2.300Å

e7yxhB1[B:1-216,B:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MN ; X-RAY DIFFRACTION 2.300Å

e7yxiA1[A:0-216,A:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MN,OGA,SO4 ; X-RAY DIFFRACTION 2.100Å

e7yxiB1[B:1-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MN,OGA,SO4 ; X-RAY DIFFRACTION 2.100Å

e7yxjA1[A:1-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MN,PD2,PEG ; X-RAY DIFFRACTION 2.450Å

e7yxjB1[B:0-216,B:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MN,PD2 ; X-RAY DIFFRACTION 2.450Å

e7yxjC1[C:0-216,C:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MN,PD2 ; X-RAY DIFFRACTION 2.450Å

e7yxjD1[D:0-216,D:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: EDO,MN,PD2 ; X-RAY DIFFRACTION 2.450Å

e7yxkA1[A:1-216,A:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: ACT,EDO,I78,MN ; X-RAY DIFFRACTION 2.430Å

e7yxkB1[B:1-216,B:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: ACT,EDO,I78,MN ; X-RAY DIFFRACTION 2.430Å

e7yxlA1[A:0-216,A:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: ACT,EDO,MG,MN,NDF ; X-RAY DIFFRACTION 2.200Å

e7yxlB1[B:1-216,B:241-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

GH14974p ; ligands: ACT,EDO,MG,MN,NDF ; X-RAY DIFFRACTION 2.200Å

e7uq3A1[A:182-416] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Bifunctional peptidase and arginyl-hydroxylase JMJD5 ; ligands: GOL,MN,O2U ; X-RAY DIFFRACTION 1.490Å

e8a82A1[A:1-361] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cupin_8 domain-containing protein ; ligands: FE,GOL ; X-RAY DIFFRACTION 2.05Å

e3al5A1[A:4-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; X-RAY DIFFRACTION 2.500Å

e3al5B1[B:1-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e3al5C1[C:6-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; X-RAY DIFFRACTION 2.500Å

e3al5D1[D:4-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e3al6A1[A:5-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; ligands: NI ; X-RAY DIFFRACTION 2.800Å

e3al6B1[B:4-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; ligands: AKG,NI ; X-RAY DIFFRACTION 2.800Å

e3al6C1[C:6-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; ligands: NI ; X-RAY DIFFRACTION 2.800Å

e3al6D1[D:4-311] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

JmjC domain-containing protein C2orf60 ; ligands: AKG,NI ; X-RAY DIFFRACTION 2.800Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

X: Glycosyl hydrolase domain-like

some similarity with Ig fold

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes