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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

X: Histone-like
H: Histone-related
T: Histone
F: TFIID_30kDa

PF03540 CL0012

Representatives:

e4wv4A1[A:113-212] * nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ligands: CL,GOL ; X-RAY DIFFRACTION 1.909Å

e6mzcO1[O:113-208] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e6mzdN1[N:113-208] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e6mzlN1[N:113-208] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e6mzlO1[O:113-208] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e6mzmO1[O:113-208] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e6tb4J1[J:58-126,J:190-216] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e6tbmJ1[J:58-126,J:190-216] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7edxJ1[J:114-216] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7edxj1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7eg7J1[J:114-216] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7eg7j1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7eg8J1[J:114-216] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7eg8j1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7eg9J1[J:114-216] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7eg9j1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egaJ1[J:114-216] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egaj1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egbJ1[J:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egbj1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egfj1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7eggJ1[J:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egcj1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7enaDj1[Dj:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egcJ1[J:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egdJ1[J:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egdj1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egeJ1[J:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egej1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egiJ1[J:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egij1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egjJ1[J:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7egjj1[j:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7enaDJ1[DJ:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7encDJ1[DJ:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7encDj1[Dj:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7ktrH1[H:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e7ktsH1[H:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e8gxqDj1[Dj:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e8gxqDJ1[DJ:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e8gxsDj1[Dj:114-218] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e8gxsDJ1[DJ:114-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

e8h7gO1[O:116-217] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 10 ; ELECTRON MICROSCOPY

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes