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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: DCoH-like
H: RBP11-like subunits of RNA polymerase
T: RBP11-like subunits of RNA polymerase
F: RNA_pol_L_2

PF13656 CL0509

Representatives:

e1xppA1[A:7-105] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

DNA-directed RNA polymerase subunit L ; ligands: ACY,SCN ; X-RAY DIFFRACTION 1.60Å

e5xogK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; X-RAY DIFFRACTION 3.000Å

e5xonK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e5oikK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e5oqjK1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e5oqmK1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e5ot2K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.2Å

e5vvrK1[K:1-111] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e5vvsK1[K:1-111] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e6eu1K1[K:39-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6eu0K1[K:41-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6eu2K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6eu3K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6f40K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6f41K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6f42K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6f44K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6bloK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.4Å

e6blpK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.2Å

e6bm2K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.4Å

e6bm4K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 2.95Å

e6bqfK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.35Å

e6exvK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC4 ; ELECTRON MICROSCOPY

e5w4uK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.6Å

e6gmhK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB11 ; ELECTRON MICROSCOPY

e6gmlK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ELECTRON MICROSCOPY

e6a5lK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6h68K1[K:40-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6cnbK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e5w51K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.4Å

e6cncK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6cndK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6cnfK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6h67K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6a5oK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6a5pK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6a5rK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6a5tK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6a5uK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6a5vK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH

e6gykK1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e6gylK1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e6gymK1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e6i84K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e6ir9K1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6j4wK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6j4xK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6j4yK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6j4zK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6j50K1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6j51K1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6hkoK1[K:45-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6hlqK1[K:45-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6hlrK1[K:45-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6hlsK1[K:45-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6inqK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e6o9lK1[K:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e6drdK1[K:2-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e6o6cI1[I:1-111] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e6rqhK1[K:40-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6rqtK1[K:43-142] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6rqlK1[K:40-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6rrdK1[K:40-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6ruiK1[K:40-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6ruoK1[K:40-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6rweK1[K:40-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6tutK1[K:41-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6tpsK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6upxK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.300Å

e6upyK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.290Å

e6upzK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.020Å

e6uq0K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.560Å

e6uq1K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.540Å

e6uq2K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.090Å

e6uq3K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.470Å

e6kf3L1[L:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit L ; ELECTRON MICROSCOPY

e6kf4L1[L:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit L ; ELECTRON MICROSCOPY

e6kf9L1[L:1-94] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit L ; ELECTRON MICROSCOPY

e6tedK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Uncharacterized protein ; ELECTRON MICROSCOPY

e7a6hK1[K:24-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7ae1K1[K:24-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7ae3K1[K:24-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7aeaK1[K:24-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7astG1[G:21-120] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7d58K1[K:24-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7d59K1[K:24-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7b0yK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e7aocK1[K:20-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7aodK1[K:20-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7aodW1[W:20-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7aoeK1[K:20-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7dn3K1[K:24-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e6xreK1[K:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e7du2K1[K:24-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7edxy1[y:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7eg7y1[y:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7eg8y1[y:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7eg9y1[y:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7egay1[y:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7egby1[y:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7lbmK1[K:1-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e7nvrK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7nvsK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7nvtK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7nvuK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7nvyK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7nvzK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7nw0K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7o4iK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7kedK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.550Å

e7egcy1[y:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7b7uK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7enaPK1[PK:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7keeK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.410Å

e7kefK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.890Å

e7nkyK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7o4jK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7o72K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7o73K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7o75K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7encPK1[PK:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7f4gK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7ok0L1[L:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit L ; ELECTRON MICROSCOPY

e7oq4L1[L:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit L ; ELECTRON MICROSCOPY

e7oqyL1[L:1-90] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit L ; ELECTRON MICROSCOPY

e7rimK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 2.9Å

e7ml4K1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7ripK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.270Å

e7riqK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 2.960Å

e7riwK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.17Å

e7rixK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.3Å

e7riyK1[K:1-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; X-RAY DIFFRACTION 3.630Å

e7ml0K1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7ml1K1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7ml2K1[K:1-112] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7meik1[k:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7vbaK1[K:21-128] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7vbbK1[K:21-128] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7meiK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7mk9K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7mkak1[k:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7vbcK1[K:21-128] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e8a43K1[K:24-130] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7z1lK1[K:41-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ligands: 4QM ; ELECTRON MICROSCOPY

e7z1mK1[K:41-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ligands: 4QM ; ELECTRON MICROSCOPY

e7z1nK1[K:41-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ligands: 1N7 ; ELECTRON MICROSCOPY

e7z1oK1[K:41-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ligands: 1N7 ; ELECTRON MICROSCOPY

e7xn7K1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e7xseK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e7xsxK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e7xszK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e7xtdK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e7xt7K1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e7xtiK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e8ceoK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7ui9K1[K:1-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7uifK1[K:1-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7uioAK1[AK:1-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7uioBK1[BK:1-116] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7zs9K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7zsaK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e7zsbK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e8gxqPK1[PK:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e8gxsPK1[PK:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e7uncK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB11 ; ELECTRON MICROSCOPY

e7undK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB11 ; ELECTRON MICROSCOPY

e7zwdK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit J ; ELECTRON MICROSCOPY

e7zx7K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit J ; ELECTRON MICROSCOPY

e7zx8K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit J ; ELECTRON MICROSCOPY

e8h0vK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e8h0wK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA polymerase II subunit B12.5 ; ELECTRON MICROSCOPY

e8cenK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11 ; ELECTRON MICROSCOPY

e8bvwK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e8byqK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e8bz1K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB11-a ; ELECTRON MICROSCOPY

e7ycx91[9:1-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e8iueK1[K:24-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e8iuhK1[K:24-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e8bwsK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ligands: 4QM ; ELECTRON MICROSCOPY

e7z0hK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7z2zK1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7z30K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e7z31K1[K:42-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerases I and III subunit RPAC2 ; ELECTRON MICROSCOPY

e8hilK1[K:7-114] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e8himK1[K:6-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA_pol_L_2 domain-containing protein ; ELECTRON MICROSCOPY

e8p4eK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8p4aK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8a40K1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8b3dK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8oeuK1[K:1-115] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ityK1[K:24-126] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7wbvK1[K:1-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8hyjK1[K:14-113] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

Previous

e1twfK1[K:1-114] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II 13.6 KDA POLYPEPTIDE ; X-RAY DIFFRACTION 2.3Å

X: ClpS-like

contains a HTH motif

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes