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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

X: Ribosomal protein L35p
H: Ribosomal protein L35p
T: Ribosomal protein L35p
F: Ribosomal_L35p

PF01632

Representatives:

e2j0181[8:2-65] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4y4o281[28:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: ARG,MG ; X-RAY DIFFRACTION 2.300Å

e4y4p181[18:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e4y4p281[28:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e6xywAD1[AD:110-169] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L35 ; ELECTRON MICROSCOPY

e7n1pLi1[Li:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: ATP ; ELECTRON MICROSCOPY

e7opei1[i:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7k50E1[E:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7nsp31[3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7a0r31[3:2-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; X-RAY DIFFRACTION 3.300Å

e7abze1[e:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7o19B31[B3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7a0s31[3:2-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 3.210Å

e7ac7e1[e:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7acje1[e:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7acre1[e:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7k51E1[E:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7k52E1[E:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7k53E1[E:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7k54E1[E:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7k55E1[E:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7lv0E1[E:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7n2cLi1[Li:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7n2uLi1[Li:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7n2vLi1[Li:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7n30Li1[Li:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7n31Li1[Li:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7nso31[3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7nsq31[3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7o1aB31[B3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7o1cB31[B3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7oiz21[2:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7oj021[2:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7a1831[3:2-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e7asm31[3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7asn31[3:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7asoj1[j:2-61] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7asp21[2:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7cpj31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7lvkl1[l:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7nwte1[e:2-65] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7p3k21[2:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7pjs31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7pjt31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7pju31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7pjv31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7pjw31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7pjx31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7pjy31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7pjz31[3:1-64] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ELECTRON MICROSCOPY

e7rq8181[18:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e7rq8281[28:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e7rq9181[18:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e7rq9281[28:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e7s1gl1[l:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e7s1hl1[l:2-65] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L35 ; ligands: MG ; ELECTRON MICROSCOPY

e2qam31[3:1-64] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4v1981[8:94-188] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MITORIBOSOMAL PROTEIN BL35M, MRPL35 ; ELECTRON MICROSCOPY

X: LuxS, MPP, ThrRS/AlaRS common domain

looks like an elaborated ferredoxin

X: ClpS-like

contains a HTH motif

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes