Home Help

X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


Keyword search


Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

X: first helical domain in RNA-polymerase beta-prime subunit
H: first helical domain in RNA-polymerase beta-prime subunit
T: first helical domain in RNA-polymerase beta-prime subunit
F: RNA_pol_Rpb1_3

PF04983

Representatives:

e1twfA6[A:520-662] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT ; X-RAY DIFFRACTION 2.3Å

e6pb5D4[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6pb6D3[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6kqdD12[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e6kqdN5[N:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e6kqeD12[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e6kqfD8[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 2.450Å

e6kqgD1[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 2.783Å

e6kqhD6[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.180Å

e6kqlD12[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 2.880Å

e6kqmD3[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.197Å

e6kqnD5[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.489Å

e6l74D5[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.100Å

e6ltsD11[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: MG ; X-RAY DIFFRACTION 3.45Å

e6psqJ3[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6psrJ6[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6pssJ7[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6psuJ2[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6psvJ4[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6pswJ2[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6pstJ7[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6upxA4[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.300Å

e6upyA1[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.290Å

e6upzA4[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.020Å

e6uq0A5[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.560Å

e6uq1A5[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.540Å

e6uq2A5[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.090Å

e6uq3A2[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.470Å

e6kf3A3[A:500-666] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e6kf4A2[A:500-666] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e6kf9A4[A:500-666] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e6woxD1[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.14Å

e6woyD8[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.00Å

e6wrgD9[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: G4P

e6n4cD8[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7c97D7[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6tqnY4[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6wr6D9[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH

e6wr8D5[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH

e6wrdD1[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH

; ligands: G4P

e7chwD8[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6pmiD1[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6pmjD3[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6tqoY4[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6utvDDD2[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.45Å

e6utwDDD1[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.85Å

e6utxDDD8[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.05Å

e6utyDDD5[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.15Å

e6utzDDD1[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.80Å

e6uu0DDD1[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.90Å

e6uu1DDD6[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.097Å

e6uu2DDD8[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.40Å

e6uu3DDD9[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.00Å

e6uu4DDD4[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.30Å

e6uu5DDD4[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 5.40Å

e6uu6DDD3[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.20Å

e6uu7DDD1[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.40Å

e6uu8DDD1[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.40Å

e6uu9DDD6[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 5.395Å

e6uuaDDD9[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.00Å

e6uubDDD1[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.95Å

e6uucDDD9[DDD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.096Å

e6vu3AE8[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vyqAE5[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vyrAE1[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vysAE1[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e6vytAE3[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vyuAE4[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vywAE3[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vyxAE3[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vyyAE9[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vyzAE7[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vz2AE3[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vz3AE3[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta ; ELECTRON MICROSCOPY

e6vz5AE7[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vz7AE8[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e6vzjAE8[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x6tAE7[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x7fAE1[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x7kAE4[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x9qAE1[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xdqAE7[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xdrAE3[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xgfAE5[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xiiAE3[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xijAE6[AE:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6m6aD4[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6m6bD1[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6m6cD9[D:778-948] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6vjsD7[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.0Å

e6vjsI5[I:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 4.0Å

e7khbD6[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7khcD7[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7khiD6[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: G4P ; ELECTRON MICROSCOPY

e6ztjCD4[CD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6ztlCD4[CD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6ztmCD3[CD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6ztnCD1[CD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6ztoCD2[CD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6ztpCD8[CD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6zu1CD8[CD:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7adbY8[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6z9pY1[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6z9qY6[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6z9rY5[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6z9sY9[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6z9tY6[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7c17D3[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6ldiD3[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7aocA9[A:682-841] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase I subunit rpa1 ; ELECTRON MICROSCOPY

e7aodA3[A:682-841] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase I subunit rpa1 ; ELECTRON MICROSCOPY

e7aodM6[M:682-841] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase I subunit rpa1 ; ELECTRON MICROSCOPY

e7aoeA3[A:682-841] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase I subunit rpa1 ; ELECTRON MICROSCOPY

e7b0yA2[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e6wmpD2[D:497-636] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6wmrD2[D:497-636] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6wmtD7[D:497-636] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: G4P ; ELECTRON MICROSCOPY

e7kheD3[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: G4P ; ELECTRON MICROSCOPY

e7adcY6[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7addY1[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7adeY2[Y:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7d7cD2[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7d7dD7[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6wmuD7[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x26J5[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x2fJ1[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x2nJ8[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x43J1[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x4wJ2[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x4yJ4[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6x50J5[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xasJ8[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xavJ6[J:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7lbmA7[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e6xl9D7[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xh7D1[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7edxo2[o:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7eg7o4[o:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7eg8o4[o:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7eg9o2[o:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7egao5[o:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7egbo3[o:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7nvrA6[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7nvsA3[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7nvtA8[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7nvuA6[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7nvyA8[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7nvzA6[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7nw0A6[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e6xh8D2[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xl5D1[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xljD6[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xllD9[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xlmD1[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xlnD8[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6xreA3[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e6cceD4[D:574-729] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.05Å

e6ccvD1[D:574-729] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ligands: EDO,GLU ; X-RAY DIFFRACTION 3.05Å

e6eydD5[D:574-729] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7kedA8[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.550Å

e7o4iA4[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7egco8[o:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7mknD9[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7mkpD2[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7b7uA5[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7nkyA2[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7keeA4[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.410Å

e7kefA3[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 3.890Å

e7o4jA9[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7o72A4[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7o73A4[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7o75A3[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7mkoD5[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7mkqD8[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7f4gA3[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7okxA4[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7nkxA4[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7ok0A4[A:495-644,A:854-880] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit A' ; ligands: ZN ; ELECTRON MICROSCOPY

e6gmhA4[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e6rqlA4[A:666-826] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase I subunit RPA190 ; ELECTRON MICROSCOPY

e6zcaY5[Y:488-656] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6zfbY5[Y:488-656] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6zfby5[y:488-656] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7ckqD5[D:488-656] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6wvjD5[D:488-656] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e6wvkD5[D:488-656] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7okyA4[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7ol0A4[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7oq4A4[A:495-644,A:854-880] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit A' ; ligands: ZN ; ELECTRON MICROSCOPY

e7oqyA4[A:495-644,A:854-880] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit A' ; ligands: ZN ; ELECTRON MICROSCOPY

e7f75D5[D:488-656] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

e7oznA3[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7oznM3[M:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RPB1 ; ELECTRON MICROSCOPY

e7ozoA3[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7ozoM3[M:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7ozpA3[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7ozpM3[M:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7pksA4[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit ; ELECTRON MICROSCOPY

e7rimA1[A:520-662] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; X-RAY DIFFRACTION 2.9Å

e7oobA6[A:534-685] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase II subunit RPB1 ; ELECTRON MICROSCOPY

e7dy6D4[D:499-638] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; ELECTRON MICROSCOPY

Previous Next

e2a69D6[D:778-948] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE BETA' CHAIN ; ligands: MG ; X-RAY DIFFRACTION 2.5Å

e2o5iD6[D:778-948] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE BETA' CHAIN ; X-RAY DIFFRACTION 2.5Å

e3dxjN13[N:778-948] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BACTRIAL RNA POLYMERASE BETA-PRIME SUBUNIT ; X-RAY DIFFRACTION 3.0Å

e4c3hA4[A:666-826] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190 ; X-RAY DIFFRACTION 3.27Å

e4bxxA4[A:520-662] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 ; X-RAY DIFFRACTION 3.28Å

e2pmzA4[A:495-644] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit A ; X-RAY DIFFRACTION 3.400Å

e4ljzD4[D:499-638] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.5871Å

e3wodD8[D:778-948] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-directed RNA polymerase subunit beta' ; X-RAY DIFFRACTION 3.6Å

e1l9uD4[D:778-948] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RNA POLYMERASE, BETA-PRIME SUBUNIT ; X-RAY DIFFRACTION 4Å

e5fj8A4[A:552-710] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1 ; ELECTRON MICROSCOPY

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes