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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

X: cradle loop barrel

Refs: Structure 14, 1489-1498; Current opinion in structural biology 18, 358-365

X: V1/V2 domain in HIV gp120
H: V1/V2 domain in HIV gp120
T: V1/V2 domain in HIV gp120
F: GP120

PF00516

Representatives:

e4tvpG2[G:120-202] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG,SO4 ; X-RAY DIFFRACTION 3.1Å

e6oroG2[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6oroI2[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6orpB2[B:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6orpG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6orpI2[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6orqB3[B:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6orqG2[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6orqI2[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc3A3[A:120-135,A:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc3C2[C:120-135,C:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc3D1[D:120-135,D:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc3E1[E:120-135,E:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc3F2[F:120-135,F:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc3G1[G:120-135,G:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc2A2[A:120-136,A:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc2C1[C:120-136,C:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc2D2[D:120-136,D:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc2E2[E:120-136,E:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc2F2[F:120-136,F:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nc2G3[G:120-136,G:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 v4.2 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6mpgV2[V:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6n1vB1[B:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: MAN,NAG ; ELECTRON MICROSCOPY

e6n1vA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: MAN,NAG ; ELECTRON MICROSCOPY

e6n1vC3[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: MAN,NAG ; ELECTRON MICROSCOPY

e6mpg21[2:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6mpgC3[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6mphA2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6mphB3[B:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6mphC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6n1w21[2:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6n1wC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6n1wc1[c:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nf2A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: BMA,NAG ; ELECTRON MICROSCOPY

e6nf2G1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: BMA,NAG ; ELECTRON MICROSCOPY

e6nf2Q3[Q:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: BMA,NAG ; ELECTRON MICROSCOPY

e6osy22[2:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: BMA,MAN,NAG ; ELECTRON MICROSCOPY

e6osyB2[B:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: BMA,MAN,NAG ; ELECTRON MICROSCOPY

e6osyK1[K:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: BMA,MAN,NAG ; ELECTRON MICROSCOPY

e6nijA3[A:120-136,A:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 Glycoprotein 120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nijC1[C:120-135A,C:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 Glycoprotein 120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nijE3[E:120-136,E:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC011 Glycoprotein 120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6olpA3[A:120-134,A:150-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6olpC3[C:120-136,C:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: FUC,NAG ; ELECTRON MICROSCOPY

e6olpE1[E:120-136,E:152-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6ot1G1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: MAN,NAG ; ELECTRON MICROSCOPY

e6ot1E1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: MAN,NAG ; ELECTRON MICROSCOPY

e6ot1P2[P:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: MAN,NAG ; ELECTRON MICROSCOPY

e6b0nG3[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp140 ; ligands: MAN,NAG ; X-RAY DIFFRACTION 3.39Å

e6udaA2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH505.N279K.G458Y.SOSIP.664 gp120 ; ELECTRON MICROSCOPY

e6udaE1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH505.N279K.G458Y.SOSIP.664 gp120 ; ELECTRON MICROSCOPY

e6udaI1[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH505.N279K.G458Y.SOSIP.664 gp120 ; ELECTRON MICROSCOPY

e6dfgA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6dfgC2[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6dfgD2[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6dfhA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6dfhC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6dfhD3[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nf5A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nf5C1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nf5J1[J:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nfcA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nfcE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6nfcF3[F:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6p62A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 NFL TD+ ; ligands: NAG ; ELECTRON MICROSCOPY

e6p62B3[B:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 NFL TD+ ; ligands: NAG ; ELECTRON MICROSCOPY

e6p62E3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Env BG505 NFL TD+ ; ligands: NAG ; ELECTRON MICROSCOPY

e6um5A2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 10.17 DT gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um5E1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 10.17 DT gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um5I2[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 10.17 DT gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um6A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 10.17DT gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um6E3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 10.17DT gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um6I2[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 10.17DT gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um7A2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um7E1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6um7I1[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6udjG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6udjJ3[J:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6udjP2[P:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6u59A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

SOSIP.664 gp120,SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6u59C2[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

SOSIP.664 gp120,SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6u59G1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

SOSIP.664 gp120,SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6udkG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6udkK2[K:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6udkR1[R:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RC1 variant of HIV-1 Env glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v8xA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v8xE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v8xI3[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v8zA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v8zG2[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v8zM2[M:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6pwuA3[A:120-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: BMA,FUC,NAG ; ELECTRON MICROSCOPY

e6pwuC4[C:120-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: FUC,NAG ; ELECTRON MICROSCOPY

e6pwuE2[E:120-205] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vrwG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vrwA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vrwD2[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6opaG2[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; X-RAY DIFFRACTION 4.08Å

e6vttG3[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v0rA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIPv5.2 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v0rC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIPv5.2 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6v0rD1[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIPv5.2 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vttF1[F:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vttE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6w03G2[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; X-RAY DIFFRACTION 2.37Å

e6vziG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; X-RAY DIFFRACTION 2.700Å

e6vpxA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vpxE2[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vpxC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: FUC,NAG ; ELECTRON MICROSCOPY

e6ulcA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

envelope glycoprotein gp120,envelope glycoprotein gp120 ; ligands: FUC,NAG ; ELECTRON MICROSCOPY

e6ulcC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

envelope glycoprotein gp120,envelope glycoprotein gp120 ; ligands: FUC,NAG ; ELECTRON MICROSCOPY

e6ulcE1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

envelope glycoprotein gp120,envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vy2A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Glycoprotein 120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vy2C3[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Glycoprotein 120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vy2E2[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Glycoprotein 120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vlrA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vlrH2[H:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vlrG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo1A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo1C2[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo1D1[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6ozcA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6ozcE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6ozcF1[F:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6pw6A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6pw6C1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6pw6E3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vn0A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vn0C2[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vn0D1[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo0A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo0C3[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo0D1[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6oz4G1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; X-RAY DIFFRACTION 4.05Å

e6vflA2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505-SOSIPv5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vl5C1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vflC3[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505-SOSIPv5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vflE2[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505-SOSIPv5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vl5A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vl5E2[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vknA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vknC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vknD1[D:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6x9rA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6x9sA1[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6x9tA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6x9uA2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6x9vA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7kdeE2[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7kdeF3[F:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7kdeG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6utkG3[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Envelope glycoprotein gp120 ; ligands: NAG ; X-RAY DIFFRACTION 3.80Å

e6v6wG2[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Envelope glycoprotein gp120 ; ligands: NAG ; X-RAY DIFFRACTION 6.50Å

e6v6wC1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Envelope glycoprotein gp120 ; ligands: NAG ; X-RAY DIFFRACTION 6.50Å

e6xrtG2[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6xrtE1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6xrtF1[F:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo3A3[A:120-134,A:150-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC009 SOSIP.v4.2 envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo3C1[C:120-134,C:150-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC009 SOSIP.v4.2 envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vo3D2[D:120-134,D:150-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

AMC009 SOSIP.v4.2 envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vi0G3[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vi0C1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6vi0I3[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6wixG2[G:120-136,G:151-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; X-RAY DIFFRACTION 2.560Å

e6witC1[C:128-194] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

16055 V1V2 1FD6 Scaffold ; ligands: NAG,SO4 ; X-RAY DIFFRACTION 2.79Å

e7luaa3[a:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 SOSIP gp120 ; ELECTRON MICROSCOPY

e7lu9d2[d:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ELECTRON MICROSCOPY

e7l6oa1[a:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp120 ; ELECTRON MICROSCOPY

e7ll1A3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e6wasG1[G:126-196] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

1FD6 16055 V1V2 scaffold ; ligands: NAG ; X-RAY DIFFRACTION 1.90Å

e6witI2[I:128-194] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

16055 V1V2 1FD6 Scaffold ; ligands: NAG ; X-RAY DIFFRACTION 2.79Å

e7l6oc3[c:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp120 ; ELECTRON MICROSCOPY

e7l6oe2[e:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp120 ; ELECTRON MICROSCOPY

e7lu9e1[e:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ELECTRON MICROSCOPY

e7lu9f3[f:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ELECTRON MICROSCOPY

e7luac3[c:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 SOSIP gp120 ; ELECTRON MICROSCOPY

e7luae2[e:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

CH848 SOSIP gp120 ; ELECTRON MICROSCOPY

e7ll1C1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7ll1G1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7ll2A2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ELECTRON MICROSCOPY

e7ll2C1[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ELECTRON MICROSCOPY

e7ll2E1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ELECTRON MICROSCOPY

e6wasJ1[J:126-196] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

1FD6 16055 V1V2 scaffold ; ligands: NAG ; X-RAY DIFFRACTION 1.90Å

e6mzjA5[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

426c DS-SOSIP D3 ; ELECTRON MICROSCOPY

e6mzjB5[B:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

426c DS-SOSIP D3 ; ELECTRON MICROSCOPY

e6mzjE5[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

426c DS-SOSIP D3 ; ELECTRON MICROSCOPY

e7llkE1[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7kmdG1[G:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; X-RAY DIFFRACTION 3.39Å

e7llkA2[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7llkI1[I:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8eC3[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8eE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8eA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8gC3[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8gE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8gA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Envelope glycoprotein gp160 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8sE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8sA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2(7S) - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8uC2[C:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2 N241/N289 - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8uE3[E:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2 N241/N289 - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

e7l8yA3[A:120-202] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BG505 SOSIP.v5.2 N241/N289 - gp120 ; ligands: NAG ; ELECTRON MICROSCOPY

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e5esvE1[E:124-197] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,Envelope glycoprotein gp160 ; ligands: NAG ; X-RAY DIFFRACTION 3.1Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes