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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

X: 60S ribosomal protein rpL36 (L36e)
H: 60S ribosomal protein rpL36 (L36e)
T: 60S ribosomal protein rpL36 (L36e)
F: Ribosomal_L36e

PF01158

Representatives:

e4v8pAQ1[AQ:2-103] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S RIBOSOMAL PROTEIN L36 ; X-RAY DIFFRACTION 3.52Å

e4v6iBk1[Bk:24-100] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein rpL36 (L36e) ; ELECTRON MICROSCOPY

e5m1ji51[i5:24-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ligands: MG ; ELECTRON MICROSCOPY

e5mc6AC1[AC:24-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ELECTRON MICROSCOPY

e5tgmO61[O6:24-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ligands: LEU,MG,OHX,PHE ; X-RAY DIFFRACTION 3.500Å

e5tgmo61[o6:24-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ligands: LEU,OHX,PHE ; X-RAY DIFFRACTION 3.500Å

e7ohpi1[i:27-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ELECTRON MICROSCOPY

e7ohri1[i:34-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ELECTRON MICROSCOPY

e7ohsi1[i:29-98] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ELECTRON MICROSCOPY

e7ohui1[i:27-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ELECTRON MICROSCOPY

e7ohvi1[i:18-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ELECTRON MICROSCOPY

e7ohwi1[i:27-100] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36-A ; ELECTRON MICROSCOPY

e4v7eCi1[Ci:36-112] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L36E ; ELECTRON MICROSCOPY

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes