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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

X: beta-propeller-like
H: beta-propeller
T: 8-bladed
F: WD40

PF00400 CL0186

Representatives:

e4zn4B1[B:53-331,B:366-534] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

sqt1 ; ligands: GOL ; X-RAY DIFFRACTION 1.940Å

e5mzhB2[B:81-422] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Dynein assembly factor with WDR repeat domains 1 ; ligands: SO4 ; X-RAY DIFFRACTION 2.4Å

e3sfzA6[A:917-1249] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

APOPTOTIC PEPTIDASE ACTIVATING FACTOR 1 ; ligands: GBL ; X-RAY DIFFRACTION 3.0Å

e8glv5L1[5L:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8glv5M1[5M:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8glv5N1[5N:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8glvAd1[Ad:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8glvAe1[Ae:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8glvAf1[Af:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8glvEo1[Eo:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8glvHG1[HG:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8otze2[e:13-368] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8otzf1[f:14-368] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8otzg2[g:14-368] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8snb4B1[4B:18-378] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8snb4C1[4C:19-378] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8shtN1[N:96-102,N:172-395] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8i7oP21[P2:288-620] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8i7rP11[P1:288-620] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8i7rP21[P2:288-620] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8i7rP31[P3:288-620] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8iyjf1[f:288-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8iyjg1[g:288-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8to0BG1[BG:288-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8to0Ba1[Ba:288-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8to0Bo1[Bo:288-619] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv1Ch2[Ch:129-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv2Ch2[Ch:129-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv3Ch1[Ch:129-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv4Ch2[Ch:129-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv5Ch1[Ch:129-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv7Ch1[Ch:129-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ir3N2[N:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl2NJ1[NJ:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl3NJ1[NJ:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl4NJ1[NJ:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8inkW1[W:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ipdW1[W:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ipxW1[W:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ipyW1[W:98-485] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8pv6Ch1[Ch:129-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl2NW1[NW:3-393] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl3NV1[NV:3-393] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl3NW1[NW:3-393] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl4NV1[NV:3-393] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl4NW1[NW:3-393] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8cljC1[C:290-762,C:785-890] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8cljH1[H:290-762,H:785-890] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8cllC1[C:290-762,C:785-890] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8cllH1[H:290-762,H:785-890] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e7edxE1[E:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7eg7E2[E:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7eg8E2[E:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7eg9E1[E:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egaE1[E:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egbE2[E:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7enaDE2[DE:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egcE2[E:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7encDE2[DE:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7mgeA1[A:29-262,A:283-354,A:396-434] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 41 ; ELECTRON MICROSCOPY

e7peqAI1[AI:4-292,AI:329-380] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Nucleoporin Nup43 ; ELECTRON MICROSCOPY

e7peqBI1[BI:4-292,BI:329-380] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Nucleoporin Nup43 ; ELECTRON MICROSCOPY

e7peqCI1[CI:4-292,CI:329-380] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Nucleoporin Nup43 ; ELECTRON MICROSCOPY

e7peqDI1[DI:4-292,DI:329-380] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Nucleoporin Nup43 ; ELECTRON MICROSCOPY

e7rr5Sg1[Sg:5-316] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanine nucleotide-binding protein subunit beta-like protein ; ELECTRON MICROSCOPY

e7osaRACK1[RACK:2-319] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BJ4_G0022010.mRNA.1.CDS.1 ; X-RAY DIFFRACTION 3.0Å

e7osmRACK1[RACK:2-319] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

BJ4_G0022010.mRNA.1.CDS.1 ; X-RAY DIFFRACTION 3.0Å

e8gxqDE2[DE:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e8gxsDE1[DE:417-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e5oqlL1[L:42-350] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Utp15 ; ELECTRON MICROSCOPY

e7kqqB1[B:25-330] Image Pymol Jmol Links: PDB, SCOP, CATH

WD repeat-containing protein 55 ; ligands: UNX ; X-RAY DIFFRACTION 1.800Å

e6zg6A1[A:5-336,A:366-409] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein transport protein SEC31 ; ELECTRON MICROSCOPY

e6zg6C1[C:5-336,C:366-409] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein transport protein SEC31 ; ELECTRON MICROSCOPY

e6zg6E1[E:5-336,E:366-409] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein transport protein SEC31 ; ELECTRON MICROSCOPY

e6zg6G1[G:5-336,G:366-409] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Protein transport protein SEC31 ; ELECTRON MICROSCOPY

e5oqlM1[M:93-266,M:288-435,M:919-952] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Utp17 ; ELECTRON MICROSCOPY

e4o9dB1[B:225-620,B:623-633] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Rik1-associated factor 1 ; ligands: CL,EDO ; X-RAY DIFFRACTION 2.000Å

e4o9dA1[A:221-620,A:623-633] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Rik1-associated factor 1 ; ligands: EDO ; X-RAY DIFFRACTION 2.000Å

e7owgE1[E:8-324] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Target of rapamycin complex subunit LST8 ; ELECTRON MICROSCOPY

e7peaD1[D:8-324] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Target of rapamycin complex subunit LST8 ; ELECTRON MICROSCOPY

e7peaC1[C:8-324] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Target of rapamycin complex subunit LST8 ; ELECTRON MICROSCOPY

e7pebC1[C:8-324] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Target of rapamycin complex subunit LST8 ; ELECTRON MICROSCOPY

e7pecC1[C:8-324] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Target of rapamycin complex subunit LST8 ; ELECTRON MICROSCOPY

e7ohrp1[p:94-174,p:198-239,p:278-453] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosome biogenesis protein YTM1 ; ELECTRON MICROSCOPY

e4lg9A1[A:152-514] Image Pymol Jmol Links: PDB, SCOP, CATH

F-box-like/WD repeat-containing protein TBL1XR1 ; ligands: UNX ; X-RAY DIFFRACTION 1.930Å

e5nafA1[A:155-513] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

F-box-like/WD repeat-containing protein TBL1XR1 ; ligands: GOL ; X-RAY DIFFRACTION 2.493Å

e5nafB1[B:155-514] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

F-box-like/WD repeat-containing protein TBL1XR1 ; ligands: GOL ; X-RAY DIFFRACTION 2.493Å

e5nafC1[C:158-513] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

F-box-like/WD repeat-containing protein TBL1XR1 ; X-RAY DIFFRACTION 2.493Å

e5nafD1[D:159-512] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

F-box-like/WD repeat-containing protein TBL1XR1 ; ligands: GOL ; X-RAY DIFFRACTION 2.493Å

e6lk8C1[C:5-290,C:336-375] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MGC154553 protein ; ELECTRON MICROSCOPY

e5wlcLJ1[LJ:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Utp15 ; ELECTRON MICROSCOPY

e6u425L1[5L:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FAP52 ; ELECTRON MICROSCOPY

e6u425M1[5M:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FAP52 ; ELECTRON MICROSCOPY

e6u425N1[5N:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FAP52 ; ELECTRON MICROSCOPY

e6ve7B1[B:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FAP52 ; ELECTRON MICROSCOPY

e6ve7C1[C:289-627] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

FAP52 ; ELECTRON MICROSCOPY

e6ke6AF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6lqpAF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6lqqAF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6lqrAF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6lqsAF1[AF:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6lqtAF1[AF:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6lquAF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6lqvAF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6zqcUO1[UO:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7ajtUO1[UO:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7ruoB1[B:20-319] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 15 homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.800Å

e7d4iB31[B3:282-651] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 13 ; ELECTRON MICROSCOPY

e7d5sAF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7d5sB31[B3:284-651] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 13 ; ELECTRON MICROSCOPY

e7d5tB31[B3:282-651] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 13 ; ELECTRON MICROSCOPY

e7d63AF1[AF:34-364] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7d63B31[B3:284-652] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 13 ; ELECTRON MICROSCOPY

e7oopY1[Y:5-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 61 ; ELECTRON MICROSCOPY

e7opcY1[Y:5-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 61 ; ELECTRON MICROSCOPY

e7opdY1[Y:5-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 61 ; ELECTRON MICROSCOPY

e7r81h21[h2:3-312] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanine nucleotide-binding protein subunit beta-like protein ; ELECTRON MICROSCOPY

e6zqaUO1[UO:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6zqbUO1[UO:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6zqdUO1[UO:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e6zqeUO1[UO:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7ajuUO1[UO:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7d4iAF1[AF:2-334,AF:359-387] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7sukLR1[LR:282-651] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 13 ; ELECTRON MICROSCOPY

e7sukLJ1[LJ:2-364] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 ; ELECTRON MICROSCOPY

e7mq8LJ1[LJ:2-318] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 homolog ; ELECTRON MICROSCOPY

e7mq9LJ1[LJ:2-318] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 homolog ; ELECTRON MICROSCOPY

e7mqaLJ1[LJ:2-318] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

U3 small nucleolar RNA-associated protein 15 homolog ; ELECTRON MICROSCOPY

e3shfA1[A:917-1249] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

APOPTOTIC PEPTIDASE ACTIVATING FACTOR 1 ; X-RAY DIFFRACTION 3.55Å

e3j2tA8[A:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3j2tB7[B:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3j2tC7[C:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3j2tD8[D:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3j2tE7[E:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3j2tF8[F:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3j2tG8[G:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3jbtA7[A:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3jbtC6[C:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3jbtE8[E:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3jbtG7[G:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3jbtI8[I:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3jbtK7[K:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e3jbtM8[M:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5juyA7[A:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5juyB9[B:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5juyC7[C:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5juyD9[D:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5juyE9[E:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5juyF7[F:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5juyG9[G:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5wveA8[A:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5wveC7[C:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5wveE7[E:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5wveG8[G:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5wveI8[I:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5wveK7[K:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e5wveM7[M:917-1248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Apoptotic protease-activating factor 1 ; ELECTRON MICROSCOPY

e2ymuA1[A:1-335] Image Pymol Jmol Links: PDB, SCOP, CATH

WD-40 REPEAT PROTEIN ; X-RAY DIFFRACTION 1.79Å

e2ymuB1[B:1-335] Image Pymol Jmol Links: PDB, SCOP, CATH

WD-40 REPEAT PROTEIN ; X-RAY DIFFRACTION 1.79Å

e6t9iD1[D:86-125,D:440-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e6t9kD2[D:86-125,D:440-798] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e6tb4G2[G:72-102,G:233-235,G:352-653,G:693-722] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Subunit (90 kDa) of TFIID and SAGA complexes ; ELECTRON MICROSCOPY

e6tbmG2[G:72-102,G:233-235,G:352-653,G:693-722] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Subunit (90 kDa) of TFIID and SAGA complexes ; ELECTRON MICROSCOPY

e7eggE1[E:417-800] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7edxe1[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7eg7e1[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7eg8e1[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7eg9e1[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egae2[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egbe2[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egfe1[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egeE1[E:417-800] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egjE1[E:417-800] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egdE2[E:419-800] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egiE1[E:419-800] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egce2[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egde2[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egee2[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egie1[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7egje1[e:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7enaDe2[De:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7encDe1[De:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e8gxqDe1[De:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e8gxsDe2[De:417-799] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Transcription initiation factor TFIID subunit 5 ; ELECTRON MICROSCOPY

e7ewrF1[F:35-353] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Guanine nucleotide-binding protein subunit beta-5 ; ELECTRON MICROSCOPY

e8i7oP11[P1:288-620] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e4v7fq2[q:127-329,q:373-515] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosome assembly protein 4 ; ELECTRON MICROSCOPY

e4zozA1[A:54-103,A:128-331,A:367-462,A:490-533] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Sqt1 ; X-RAY DIFFRACTION 1.70Å

e7ohvp1[p:94-122,p:143-170,p:202-239,p:278-453] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosome biogenesis protein YTM1 ; ELECTRON MICROSCOPY

e7ruoA1[A:19-319] Image Pymol Jmol Links: PDB, SCOP, CATH

U3 small nucleolar RNA-associated protein 15 homolog ; ligands: UNX ; X-RAY DIFFRACTION 1.800Å

e7axpA1[A:30-333] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; X-RAY DIFFRACTION 2.432Å

e7axqA1[A:22-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; X-RAY DIFFRACTION 1.56Å

e7axsA1[A:22-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; X-RAY DIFFRACTION 1.88Å

e7axuA1[A:22-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; X-RAY DIFFRACTION 1.68Å

e7axxA1[A:23-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; ligands: 4FO,ALQ,S7Z ; X-RAY DIFFRACTION 1.79Å

e7bcyA1[A:31-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; X-RAY DIFFRACTION 1.4996Å

e7bcyB1[B:30-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; X-RAY DIFFRACTION 1.4996Å

e7bedA1[A:27-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; ligands: SO4 ; X-RAY DIFFRACTION 1.26Å

e7jtoB1[B:32-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; ligands: EDO,SCN,VKA ; X-RAY DIFFRACTION 1.700Å

e7jtpA1[A:32-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; ligands: GOL,X6M ; X-RAY DIFFRACTION 2.050Å

e7mbmB1[B:33-332] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; ELECTRON MICROSCOPY

e7mbnB1[B:32-334] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

WD repeat-containing protein 5 ; ELECTRON MICROSCOPY

e7q2jD1[D:30-333] Image Pymol Jmol Links: PDB, SCOP, CATH

WD repeat-containing protein 5 ; ligands: 8KH ; X-RAY DIFFRACTION 2.5Å

Next

e3j65q2[q:127-515] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes