Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
![](/ecod/img/m.gif)
![](/ecod/img/m.gif)
![](/ecod/img/m.gif)
![](/ecod/img/m.gif)
Representatives:
e3ei1A1[A:1-355]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DNA damage-binding protein 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.800Å
e4a0aA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.60Å
e4a0kC1[C:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 5.93Å
e4a0lA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å
e4a0lC1[C:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å
e4e54A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å
e4e5zA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å
e3ei2A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.600Å
e3ei4E2[E:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å
e3ei4A8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å
e3ei4C8[C:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å
e2b5lA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å
e2b5lB7[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å
e3i7kA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e2b5mA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.92Å
e3i8eA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å
e3i8eB8[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å
e3i7nA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e3i7oA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e3i89A8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å
e3i7pA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å
e3i8cA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e3i7lA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e4a08A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; ligands: MES ; X-RAY DIFFRACTION 3.00Å
e4a09A4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.10Å
e4a0bA4[A:4-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å
e4a0bC4[C:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å
e4a11A4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.30Å
e3ei3A4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.300Å
e4ci1A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.98Å
e4ci2A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.95Å
e4ci3A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.50Å
e3e0cA3[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.400Å
e3i7hA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.9Å
e2hyeA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.100Å
e5fqdA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.45Å
e5fqdD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.45Å
e4tz4A1[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.010Å
e5hxbY4[Y:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å
e5hxbB1[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å
e5gm6F1[F:56-299,F:324-451,F:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e5jk7A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å
e5jk7B1[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å
e5hy7A4[A:7-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Putative pre-mRNA splicing protein ; X-RAY DIFFRACTION 2.9Å
e5hy7B4[B:7-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Putative pre-mRNA splicing protein ; ligands: CA ; X-RAY DIFFRACTION 2.9Å
e5lqwX1[X:56-299,X:324-451,X:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e5v3oA4[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å
e5nrlP4[P:53-299,P:324-451,P:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6bn7A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å
e6bllA3[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH
e6blyA1[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e6bm0A1[A:1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e6f9nA2[A:1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; X-RAY DIFFRACTION 2.50Å
e6fbsA1[A:-1-399] Image Pymol Jmol Links: PDB, SCOP, CATH
e6fuwA3[A:-1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e6bn9A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.38Å
e6bnbA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 6.34Å
e6boyA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.33Å
e6bn8A2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.99Å
e5zwm33[3:56-299,3:324-451,3:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6g90P1[P:53-299,P:324-451,P:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6dnhA1[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e5zyaA1[A:0-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6ff4v3[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e5z5632[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e5zwo32[3:56-299,3:324-451,3:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6en4A1[A:0-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; X-RAY DIFFRACTION 3.08Å
e5z5731[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e5z5833[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6h0fJ3[J:-10-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å
e6ah034[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6h0fA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å
e6h0fD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å
e6h0fG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å
e6h0gA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DDB1 (DNA damage binding protein 1),DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.170Å
e6h0gD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DDB1 (DNA damage binding protein 1),DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.170Å
e6ahd32[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6dszA4[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å
e6dszB3[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å
e6fcvA4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å
e6ff7v1[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6qx9B31[B3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6r8yK2[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e6r8zK2[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e6r90K1[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e6r91K3[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e6r92K2[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e6paiA2[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: EPE ; X-RAY DIFFRACTION 2.900Å
e6urgA1[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e6uroA3[A:1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e6q0rA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å
e6q0vA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å
e6q0wA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å
e6ud7B2[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.300Å
e6ue5B1[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.61Å
e6sj7B2[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e6umlA4[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.58Å
e6y50v4[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6y5qv1[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6td3A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å
e6td3D3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å
e6td3G3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å
e6xk9Y3[Y:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å
e6xk9B3[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å
e7abgE2[E:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7abhE3[E:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7abiE4[E:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7dco31[3:56-299,3:324-451,3:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RSE1 isoform 1 ; ELECTRON MICROSCOPY
e7dvq32[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7lpsA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å
e7lpsD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å
e7lpsG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å
e7lpsJ3[J:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å
e6zx9A1[A:-1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: GOL ; X-RAY DIFFRACTION 2.51Å
e6zueA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.09Å
e7okqA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7okqE1[E:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7okqI1[I:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7okqM1[M:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7oobd1[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7oopd1[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7opcd1[d:1-385] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7opdd1[d:1-385] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7onbA4[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7oo3d1[d:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7q3lC1[C:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7q4pC1[C:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8cvpA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7uA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7vA3[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7wA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7xA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7yA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7zA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d80A1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7uknA2[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.87Å
e7v7bB3[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7v7bD1[D:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7v7cB4[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7v7cF2[F:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d81A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7q4oC1[C:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7evnA4[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7evo34[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8ajmA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8ajnA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8ajoA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8g46A1[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8e3iA4[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e8e3qA2[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e8h7gA1[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8hk133[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7zn7A2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7znnA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7qttA1[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8ch6A1[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7vpx33[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8deyB2[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.700Å
e8deyE1[E:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.700Å
e7u8fB1[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.150Å
e7u8fE3[E:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: EPE,SO4 ; X-RAY DIFFRACTION 3.150Å
e8ov6A3[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DDB1deltaBPB ; ELECTRON MICROSCOPY
e8b3id2[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH
; ELECTRON MICROSCOPY
e8oizA3[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: EDO ; X-RAY DIFFRACTION 2.500Å
e8bu1A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: GOL ; X-RAY DIFFRACTION 2.98Å
e8bumA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.359Å
e8b3dd1[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH
; ELECTRON MICROSCOPY
e3ei1A2[A:393-708]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.800Å
![](/ecod/img/p.gif)
Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes