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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

X: beta-propeller-like
H: beta-propeller
T: 7-bladed
F: MMS1_N

PF10433 CL0186

Representatives:

e3ei1A1[A:1-355] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.800Å

e4a0aA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.60Å

e4a0kC1[C:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 5.93Å

e4a0lA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å

e4a0lC1[C:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å

e4e54A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å

e4e5zA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å

e3ei2A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.600Å

e3ei4E2[E:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å

e3ei4A8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å

e3ei4C8[C:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å

e2b5lA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å

e2b5lB7[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å

e3i7kA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e2b5mA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.92Å

e3i8eA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å

e3i8eB8[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å

e3i7nA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e3i7oA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e3i89A8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å

e3i7pA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å

e3i8cA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e3i7lA8[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å

e4a08A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; ligands: MES ; X-RAY DIFFRACTION 3.00Å

e4a09A4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.10Å

e4a0bA4[A:4-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å

e4a0bC4[C:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å

e4a11A4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.30Å

e3ei3A4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.300Å

e4ci1A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.98Å

e4ci2A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.95Å

e4ci3A4[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.50Å

e3e0cA3[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.400Å

e3i7hA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.9Å

e2hyeA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.100Å

e5fqdA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.45Å

e5fqdD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.45Å

e4tz4A1[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.010Å

e5hxbY4[Y:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å

e5hxbB1[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å

e5gm6F1[F:56-299,F:324-451,F:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e5jk7A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å

e5jk7B1[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å

e5hy7A4[A:7-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Putative pre-mRNA splicing protein ; X-RAY DIFFRACTION 2.9Å

e5hy7B4[B:7-423] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Putative pre-mRNA splicing protein ; ligands: CA ; X-RAY DIFFRACTION 2.9Å

e5lqwX1[X:56-299,X:324-451,X:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e5v3oA4[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å

e5nrlP4[P:53-299,P:324-451,P:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6bn7A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å

e6bllA3[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH

e6blyA1[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6bm0A1[A:1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6f9nA2[A:1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; X-RAY DIFFRACTION 2.50Å

e6fbsA1[A:-1-399] Image Pymol Jmol Links: PDB, SCOP, CATH

e6fuwA3[A:-1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6bn9A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.38Å

e6bnbA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 6.34Å

e6boyA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.33Å

e6bn8A2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.99Å

e5zwm33[3:56-299,3:324-451,3:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6g90P1[P:53-299,P:324-451,P:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6dnhA1[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e5zyaA1[A:0-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6ff4v3[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e5z5632[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e5zwo32[3:56-299,3:324-451,3:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY

e6en4A1[A:0-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; X-RAY DIFFRACTION 3.08Å

e5z5731[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e5z5833[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6h0fJ3[J:-10-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6ah034[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6h0fA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6h0fD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6h0fG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.250Å

e6h0gA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DDB1 (DNA damage binding protein 1),DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.170Å

e6h0gD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DDB1 (DNA damage binding protein 1),DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 4.170Å

e6ahd32[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6dszA4[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å

e6dszB3[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å

e6fcvA4[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6ff7v1[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6qx9B31[B3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6r8yK2[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r8zK2[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r90K1[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r91K3[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6r92K2[K:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6paiA2[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: EPE ; X-RAY DIFFRACTION 2.900Å

e6urgA1[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6uroA3[A:1-399] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e6q0rA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6q0vA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6q0wA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å

e6ud7B2[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.300Å

e6ue5B1[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.61Å

e6sj7B2[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e6umlA4[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.58Å

e6y50v4[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6y5qv1[v:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e6td3A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å

e6td3D3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å

e6td3G3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1,DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.46Å

e6xk9Y3[Y:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å

e6xk9B3[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å

e7abgE2[E:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7abhE3[E:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7abiE4[E:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7dco31[3:56-299,3:324-451,3:472-483] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

RSE1 isoform 1 ; ELECTRON MICROSCOPY

e7dvq32[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7lpsA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e7lpsD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e7lpsG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e7lpsJ3[J:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.78Å

e6zx9A1[A:-1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: GOL ; X-RAY DIFFRACTION 2.51Å

e6zueA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.09Å

e7okqA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7okqE1[E:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7okqI1[I:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7okqM1[M:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7oobd1[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7oopd1[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7opcd1[d:1-385] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7opdd1[d:1-385] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7onbA4[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7oo3d1[d:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7q3lC1[C:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7q4pC1[C:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e8cvpA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d7uA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d7vA3[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d7wA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d7xA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d7yA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d7zA1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d80A1[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7uknA2[A:2-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.87Å

e7v7bB3[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7v7bD1[D:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7v7cB4[B:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7v7cF2[F:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8d81A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7q4oC1[C:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7evnA4[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7evo34[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e8ajmA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8ajnA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8ajoA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8g46A1[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e8e3iA4[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e8e3qA2[A:1-400] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY

e8h7gA1[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e8hk133[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7zn7A2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7znnA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ELECTRON MICROSCOPY

e7qttA1[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e8ch6A1[A:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e7vpx33[3:1-403] Image Pymol Jmol Links: PDB, SCOP, CATH

Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY

e8deyB2[B:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.700Å

e8deyE1[E:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.700Å

e7u8fB1[B:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.150Å

e7u8fE3[E:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; ligands: EPE,SO4 ; X-RAY DIFFRACTION 3.150Å

e8ov6A3[A:2-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DDB1deltaBPB ; ELECTRON MICROSCOPY

e8b3id2[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8oizA3[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: EDO ; X-RAY DIFFRACTION 2.500Å

e8bu1A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: GOL ; X-RAY DIFFRACTION 2.98Å

e8bumA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: SO4 ; X-RAY DIFFRACTION 3.359Å

e8b3dd1[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e3ei1A2[A:393-708] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.800Å

e5ifeA1[A:1-403] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; X-RAY DIFFRACTION 3.1Å

e5ifeA2[A:442-772] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Splicing factor 3B subunit 3 ; ligands: K ; X-RAY DIFFRACTION 3.1Å

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes