Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
![](/ecod/img/m.gif)
![](/ecod/img/m.gif)
![](/ecod/img/m.gif)
![](/ecod/img/m.gif)
Representatives:
e3ei1A1[A:1-355]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DNA damage-binding protein 1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.800Å
e3ei1A2[A:393-708]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.800Å
e8ojhA3[A:389-704] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; X-RAY DIFFRACTION 2.720Å
e8ojhA2[A:1-351] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: EDO ; X-RAY DIFFRACTION 2.720Å
e8bu1D3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: GOL ; X-RAY DIFFRACTION 2.98Å
e8bu1G2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: GOL ; X-RAY DIFFRACTION 2.98Å
e8bu2A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.127Å
e8bu2D1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.127Å
e8bu2G1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.127Å
e8bu3A2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.42Å
e8bu3D1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.42Å
e8bu3G2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.42Å
e8bu4A3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.079Å
e8bu4D1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.079Å
e8bu4G3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.079Å
e8bu5A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.134Å
e8bu5D3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; X-RAY DIFFRACTION 3.134Å
e8bu5G3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.134Å
e8bu6G1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.45Å
e8bu6D2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.45Å
e8bu6A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.45Å
e8bu7A1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.245Å
e8bu7D1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.245Å
e8bu7G1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.245Å
e8bu9A2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.505Å
e8bu9D1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.505Å
e8bu9G1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.505Å
e8buaA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: CIT ; X-RAY DIFFRACTION 3.193Å
e8buaD3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: CIT ; X-RAY DIFFRACTION 3.193Å
e8buaG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: CIT ; X-RAY DIFFRACTION 3.193Å
e8bubA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: CIT ; X-RAY DIFFRACTION 3.417Å
e8bubD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: CIT ; X-RAY DIFFRACTION 3.417Å
e8bubG3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: CIT ; X-RAY DIFFRACTION 3.417Å
e8bucA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.85Å
e8bucD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.85Å
e8bucG1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.85Å
e8budA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.198Å
e8budD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.198Å
e8budG3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.198Å
e8bueA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.246Å
e8bueD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.246Å
e8bueG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.246Å
e8bufA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.298Å
e8bufD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.298Å
e8bufG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.298Å
e8bugA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: CIT ; X-RAY DIFFRACTION 3.527Å
e8bugD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: CIT ; X-RAY DIFFRACTION 3.527Å
e8bugG1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.527Å
e8buhA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.789Å
e8buhD3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.789Å
e8buhG1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.789Å
e8buiA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.50Å
e8buiD3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.50Å
e8buiG1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.50Å
e8bujA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.618Å
e8bujD3[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.618Å
e8bujG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.618Å
e8bukA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.406Å
e8bukD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.406Å
e8bukG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.406Å
e8bulA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.40Å
e8bulD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.40Å
e8bulG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.40Å
e8bumD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.359Å
e8bumG1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.359Å
e8bunA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.08Å
e8bunD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.08Å
e8bunG3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.08Å
e8buoA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.58Å
e8buoD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.58Å
e8buoG3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.58Å
e8bupA3[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.408Å
e8bupD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.408Å
e8bupG1[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ligands: SO4 ; X-RAY DIFFRACTION 3.408Å
e8buqA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: CIT ; X-RAY DIFFRACTION 3.199Å
e8buqD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: CIT ; X-RAY DIFFRACTION 3.199Å
e8buqG3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.199Å
e8burD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.64Å
e8burA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.64Å
e8burG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.64Å
e8busD1[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.253Å
e8busA2[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.253Å
e8busG3[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.253Å
e8butA1[A:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.246Å
e8butD2[D:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.246Å
e8butG2[G:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ligands: SO4 ; X-RAY DIFFRACTION 3.246Å
e8b3fd3[d:1-355] Image Pymol Jmol Links: PDB, SCOP, CATH
; ELECTRON MICROSCOPY
e4a0kC2[C:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 5.93Å
e4a0lA2[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å
e4a0lC2[C:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 7.40Å
e4e54A3[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å
e4e5zA3[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å
e2b5nA1[A:392-707] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
damage-specific DNA binding protein 1 ; X-RAY DIFFRACTION 2.54Å
e2b5nB1[B:387-707] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
damage-specific DNA binding protein 1 ; ligands: IPA ; X-RAY DIFFRACTION 2.54Å
e2b5nC1[C:387-706] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
damage-specific DNA binding protein 1 ; X-RAY DIFFRACTION 2.54Å
e2b5nD1[D:388-707] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
damage-specific DNA binding protein 1 ; X-RAY DIFFRACTION 2.54Å
e3ei2A2[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.600Å
e3ei4E3[E:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å
e3ei4A7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å
e3ei4C7[C:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.200Å
e2b5lA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å
e2b5lB6[B:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.85Å
e3i7kA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e2b5mA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DAMAGE-SPECIFIC DNA BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.92Å
e3i8eA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å
e3i8eB7[B:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.4Å
e3i7nA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e3i7oA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e3i89A7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å
e3i7pA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.0Å
e3i8cA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e3i7lA7[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.8Å
e4a08A3[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.00Å
e4a09A3[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.10Å
e4a0bA3[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å
e4a0bC3[C:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.80Å
e4a11A3[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.30Å
e3ei3A3[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.300Å
e4ci1A2[A:389-704] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.98Å
e4ci2A2[A:389-704] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.95Å
e4ci3A2[A:389-704] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 3.50Å
e3e0cA4[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.400Å
e3i7hA2[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA DAMAGE-BINDING PROTEIN 1 ; X-RAY DIFFRACTION 2.9Å
e2hyeA1[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.100Å
e4tz4A2[A:389-704] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.010Å
e5hxbY1[Y:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å
e5hxbB3[B:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.600Å
e5gm6F4[F:452-784,F:815-851] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e5jk7A2[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å
e5jk7B4[B:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.49Å
e5lqwX4[X:452-784,X:815-851] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e5v3oA3[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.2Å
e5nrlP2[P:452-784,P:815-851] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6fbsA4[A:519-541,A:569-709,A:782-813,A:845-903,A:928-1003] Image Pymol Jmol Links: PDB, SCOP, CATH
e6fuwA2[A:519-541,A:569-709,A:782-813,A:845-903,A:928-1003] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e5zwm34[3:452-784,3:815-851] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6g90P2[P:452-784,P:815-851] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6dnhA4[A:519-541,A:570-708,A:781-813,A:845-901,A:926-1003] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e5zyaA4[A:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ligands: K ; ELECTRON MICROSCOPY
e6ff4v2[v:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e5z5633[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e5zwo31[3:452-784,3:815-851] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e6en4A3[A:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; X-RAY DIFFRACTION 3.08Å
e5z5734[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e5z5832[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6ah032[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6ahd33[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6dszA2[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å
e6dszB2[B:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.093Å
e6fcvA3[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.9Å
e6ff7v4[v:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6qx9B33[B3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6paiA1[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.900Å
e6urgA4[A:519-541,A:570-708,A:781-813,A:845-901,A:926-1003] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e6uroA1[A:519-541,A:569-709,A:782-813,A:845-903,A:928-1003] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e6umlA1[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.58Å
e6y50v2[v:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6y5qv4[v:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6xk9Y2[Y:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å
e6xk9B4[B:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.64Å
e7abgE4[E:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7abhE4[E:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7abiE2[E:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7dco33[3:452-784,3:815-851] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
RSE1 isoform 1 ; ELECTRON MICROSCOPY
e7dvq34[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e6zx9A4[A:395-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.51Å
e6zueA4[A:396-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 3.09Å
e7oqbP4[P:518-784,P:814-845] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Pre-mRNA-splicing factor RSE1 ; ELECTRON MICROSCOPY
e7okqA4[A:395-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7okqE4[E:395-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7okqI4[I:395-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7okqM4[M:395-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7oopd4[d:395-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7ktsS4[S:443-734] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7opcd4[d:386-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7opdd4[d:386-684] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7onbA2[A:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7oo3d3[d:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7q3lC4[C:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8cvpA2[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7uA4[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7vA1[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7wA2[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7xA2[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7yA2[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d7zA3[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8d80A2[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7uknA1[A:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; X-RAY DIFFRACTION 2.87Å
e7v7bB1[B:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7v7bD2[D:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7v7cB3[B:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7v7cF1[F:389-701] Image Pymol Jmol Links: PDB, SCOP, CATH
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e7q4oC3[C:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7evnA2[A:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e7evo32[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8ajmA3[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8ajnA4[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8ajoA4[A:393-708] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA damage-binding protein 1 ; ELECTRON MICROSCOPY
e8e3iA2[A:519-541,A:570-708,A:781-813,A:845-901,A:926-1003] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e8e3qA1[A:519-541,A:570-708,A:781-813,A:845-901,A:926-1003] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Cleavage and polyadenylation specificity factor subunit 1 ; ELECTRON MICROSCOPY
e8h7gA3[A:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
e8hk134[3:442-772] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Splicing factor 3B subunit 3 ; ELECTRON MICROSCOPY
Next![](/ecod/img/p.gif)
Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes