Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer




Representatives:
e2e9xC2[C:1001-1087]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
GINS complex subunit 3 ; X-RAY DIFFRACTION 1.99Å
e8q6oI2[I:2-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8b9bE2[E:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8b9cE1[E:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e2e9xG2[G:1-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
GINS complex subunit 3 ; X-RAY DIFFRACTION 1.99Å
e2q9qD2[D:2-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
GINS complex subunit 3 ; X-RAY DIFFRACTION 2.36Å
e2q9qH2[H:2-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
GINS complex subunit 3 ; X-RAY DIFFRACTION 2.36Å
e2ehoD2[D:3-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
GINS COMPLEX SUBUNIT 3 ; ligands: SO4 ; X-RAY DIFFRACTION 3.0Å
e2ehoH2[H:3-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
GINS COMPLEX SUBUNIT 3 ; ligands: SO4 ; X-RAY DIFFRACTION 3.0Å
e2ehoL2[L:3-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
GINS COMPLEX SUBUNIT 3 ; ligands: SO4 ; X-RAY DIFFRACTION 3.0Å
e3jc5C1[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e3jc6C1[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e3jc7C1[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e5u8sC2[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e5u8tC1[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6hv9E2[E:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6rawM1[M:8-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
AT18545p ; ELECTRON MICROSCOPY
e6razM2[M:8-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
AT18545p ; ELECTRON MICROSCOPY
e6raxM1[M:8-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
AT18545p ; ELECTRON MICROSCOPY
e6rayM1[M:8-72] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
AT18545p ; ELECTRON MICROSCOPY
e6ptjC2[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6ptnc1[c:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6ptnC2[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6ptop2[p:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6ptoC2[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6ptoc2[c:3-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6u0mC1[C:3-73] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6sklC2[C:-4-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6xtxC2[C:3-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e6xtyC1[C:3-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e7pfoF2[F:2-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e7ploF2[F:2-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e7pmkC2[C:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e7pmnC2[C:2-75] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e7qhsC2[C:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e7z13C1[C:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e7z13J2[J:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
DNA replication complex GINS protein PSF3 ; ELECTRON MICROSCOPY
e8b9dF2[F:5-87] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8q6oO1[O:2-81] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY
e8b9aE2[E:1-73] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
; ELECTRON MICROSCOPY

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes